Re: [Bioc-devel] Maintainers submit your SSH public keys

2017-07-13 Thread Ramon Diaz-Uriarte
Dear Nitesh,

Things are working, thanks. One minor suggestion: would it be worth
pointing out (for example, in
https://github.com/Bioconductor/bioc_git_transition ) that to clone with
read/write permissions we might need to add the ssh key to the agent in the
current session, specially if we use a key different from id_rsa? (This is
covered, for instance, in
https://help.github.com/articles/error-permission-denied-publickey/ )


Best,

R.



On Wed, 12-07-2017, at 15:29:11, Turaga, Nitesh  
wrote:
> Hi Ramon,
>
> This is a good question. Your key will be processed every 24 hours. If you
> have already submitted, then, you should be able to work through the
> documentation provided
> (https://github.com/Bioconductor/bioc_git_transition/tree/master/doc).
> Working through the documentation to check everything is in order helps
> everyone in the Bioconductor community too.
>
> Or a simple way to check is, make a change in your cloned package, ideally
> it is a ³version bump² in the DESCRIPTION file. Then, try to git add ‹>
> commit ‹> push the change up to the new git server. These steps are given
> in our documentation,
>
> https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenari
> o-11-maintain-without-github.md#clone-and-setup-the-package-on-your-local-m
> achine
>
>
> https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenari
> o-11-maintain-without-github.md#make-and-commit-changes-to-your-local-repos
> itory
>
>
> We appreciate feedback on this.
>
> Best,
>
> Nitesh
>
> P.S We have already processed your previous submission. Don¹t worry, we
> don¹t process duplicate submissions.
>
>
>>Dear Nitesh,
>>
>>I just filled it up again, though I think I did fill up and hit
>>send/submit
>>a few days ago. Is there a way for me to confirm it has worked?
>>
>>
>>Best,
>>
>>
>>R.
>>
>>
>>
>>On Wed, 12-07-2017, at 14:50:14, Turaga, Nitesh
>> wrote:
>>> Hi Maintainers,
>>>
>>> Please submit your (SSH public key or GitHub id) and SVN id in this
>>>google
>>> form https://goo.gl/forms/eg36vcBkIUjfZfLe2. It will only take a minute
>>>or
>>> less.
>>>
>>> This is a crucial step to the transition, which is going to happen soon.
>>> You will be able to test/complain/learn about the new git server during
>>> Bioc2017 (Boston - July 26th onwards), and will be good to go from the
>>>day
>>> of transition. It is critical for maintainers who are actively
>>>maintaining
>>> their package on Bioconductor.
>>>
>>> We have received very few SSH public keys so far from the 1300+
>>> maintainers in Bioconductor.
>>>
>>>
>>> Best Regards,
>>>
>>> Nitesh
>>>
>>>
>>>
>>>
>>> This email message may contain legally privileged and/or confidential
>>>information.  If you are not the intended recipient(s), or the employee
>>>or agent responsible for the delivery of this message to the intended
>>>recipient(s), you are hereby notified that any disclosure, copying,
>>>distribution, or use of this email message is prohibited.  If you have
>>>received this message in error, please notify the sender immediately by
>>>e-mail and delete this email message from your computer. Thank you.
>>> ___
>>> Bioc-devel@r-project.org mailing list
>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>
>>
>>--
>>Ramon Diaz-Uriarte
>>Department of Biochemistry, Lab B-25
>>Facultad de Medicina
>>Universidad Autónoma de Madrid
>>Arzobispo Morcillo, 4
>>28029 Madrid
>>Spain
>>
>>Phone: +34-91-497-2412
>>
>>Email: rdia...@gmail.com
>>   ramon.d...@iib.uam.es
>>
>>http://ligarto.org/rdiaz
>
>
>
> This email message may contain legally privileged and/or confidential 
> information.  If you are not the intended recipient(s), or the employee or 
> agent responsible for the delivery of this message to the intended 
> recipient(s), you are hereby notified that any disclosure, copying, 
> distribution, or use of this email message is prohibited.  If you have 
> received this message in error, please notify the sender immediately by 
> e-mail and delete this email message from your computer. Thank you.


--
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid
Arzobispo Morcillo, 4
28029 Madrid
Spain

Phone: +34-91-497-2412

Email: rdia...@gmail.com
   ramon.d...@iib.uam.es

http://ligarto.org/rdiaz

___
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel

Re: [Bioc-devel] Maintainers submit your SSH public keys

2017-07-13 Thread Turaga, Nitesh
Jason,

Yes, your GitHub username is your GitHub ID. Thanks Lluis for answering this 
question promptly.

Lluis,

This is an interesting question about the tagging in GitHub. Keep in mind the 
“tagging” feature is fairly recent in the Github world, and I’m not sure enough 
people search with that identifier. There are many repositories on Github which 
are tagged by “bioconductor", but are not a package. So, that line has already 
been crossed.

“bioconductor-package” seems to be a good tag for packages. I would say it is 
fairly obvious for users. You could also tag them with whatever other package 
specific tags you see fit (rstats, bioinformatics etc).

Best,

Nitesh

Hi,

Yes, Jason your Github username is the Github id.

I have a question about one social feature of github: the topics of a 
repository. Should we tag the repositories with packages included (or intended 
to be included) in Bioconductor with the tag "bioconductor" or 
"biocondcutor-package"?
I am asking this because some repositories might be related to bioconductor but 
they aren't a package.

Regards,

Lluís

On 13 July 2017 at 11:43, Jason Serviss 
mailto:jason.serv...@ki.se>> wrote:
Hello,

What exactly is ment with “Github id”? My Github username?

Kind Regards,
Jason


On 12 Jul 2017, at 18:16, Turaga, Nitesh 
mailto:nitesh.tur...@roswellpark.org><mailto:nitesh.tur...@roswellpark.org<mailto:nitesh.tur...@roswellpark.org>>>
 wrote:

Hi Samuel,


This is a great question.


You are not required to create a Github repository for your package. But, if 
you are actively maintaining your package, and would like to take advantage of 
the social coding features and the extended Bioconductor community it is a 
really good idea.


If you want to just maintain it on our Git server, once you have SSH access, 
you are welcome to do that as well. This is highlighted in our documentation 
https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenario-11-maintain-without-github.md.


We welcome feedback on the documentation, and FAQ section 
(https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/faq.md)



Best Regards,


Nitesh




From: Samuel E Zimmerman 
mailto:sezim...@einstein.yu.edu><mailto:sezim...@einstein.yu.edu<mailto:sezim...@einstein.yu.edu>>>
Sent: Wednesday, July 12, 2017 11:49 AM
To: Turaga, Nitesh; Ramon Diaz-Uriarte; 
bioc-devel@r-project.org<mailto:bioc-devel@r-project.org><mailto:bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>>
Subject: RE: [Bioc-devel] Maintainers submit your SSH public keys

Dear Nitesh,

This may seem like an obvious question, but if we have not created a repository 
for our packages yet, should we create a GitHub repository using the directions 
here:

https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenario-1-svn-to-github.md


Thank you.

Best,
Sam

From: Bioc-devel 
[bioc-devel-boun...@r-project.org<mailto:bioc-devel-boun...@r-project.org><mailto:bioc-devel-boun...@r-project.org<mailto:bioc-devel-boun...@r-project.org>>]
 on behalf of Turaga, Nitesh 
[nitesh.tur...@roswellpark.org<mailto:nitesh.tur...@roswellpark.org><mailto:nitesh.tur...@roswellpark.org<mailto:nitesh.tur...@roswellpark.org>>]
Sent: Wednesday, July 12, 2017 11:29 AM
To: Ramon Diaz-Uriarte; 
bioc-devel@r-project.org<mailto:bioc-devel@r-project.org><mailto:bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>>
Subject: Re: [Bioc-devel] Maintainers submit your SSH public keys

Hi Ramon,

This is a good question. Your key will be processed every 24 hours. If you
have already submitted, then, you should be able to work through the
documentation provided
(https://github.com/Bioconductor/bioc_git_transition/tree/master/doc).
Working through the documentation to check everything is in order helps
everyone in the Bioconductor community too.

Or a simple way to check is, make a change in your cloned package, ideally
it is a �version bump� in the DESCRIPTION file. Then, try to git add �>
commit �> push the change up to the new git server. These steps are given
in our documentation,

https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenari
o-11-maintain-without-github.md#clone-and-setup-the-package-on-your-local-m
achine


https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenari
o-11-maintain-without-github.md#make-and-commit-changes-to-your-local-repos
itory


We appreciate feedback on this.

Best,

Nitesh

P.S We have already processed your previous submission. Don�t worry, we
don�t process duplicate submissions.


Dear Nitesh,

I just filled it up again, though I think I did fill up and hit
send/submit
a few days ago. Is there a way for me to confirm it has worked?


Best,


R.



On Wed, 12-07-2017, at 14:50:14, Turaga, Nit

Re: [Bioc-devel] Maintainers submit your SSH public keys

2017-07-13 Thread Lluís Revilla
Hi,

Yes, Jason your Github username is the Github id.

I have a question about one social feature of github: the topics of a
repository. Should we tag the repositories with packages included (or
intended to be included) in Bioconductor with the tag "bioconductor" or
"biocondcutor-package"?
I am asking this because some repositories might be related to bioconductor
but they aren't a package.

Regards,

Lluís

On 13 July 2017 at 11:43, Jason Serviss  wrote:

> Hello,
>
> What exactly is ment with “Github id”? My Github username?
>
> Kind Regards,
> Jason
>
>
> On 12 Jul 2017, at 18:16, Turaga, Nitesh  <mailto:nitesh.tur...@roswellpark.org>> wrote:
>
> Hi Samuel,
>
>
> This is a great question.
>
>
> You are not required to create a Github repository for your package. But,
> if you are actively maintaining your package, and would like to take
> advantage of the social coding features and the extended Bioconductor
> community it is a really good idea.
>
>
> If you want to just maintain it on our Git server, once you have SSH
> access, you are welcome to do that as well. This is highlighted in our
> documentation https://github.com/Bioconductor/bioc_git_
> transition/blob/master/doc/scenario-11-maintain-without-github.md.
>
>
> We welcome feedback on the documentation, and FAQ section (
> https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/faq.md
> )
>
>
>
> Best Regards,
>
>
> Nitesh
>
>
>
> 
> From: Samuel E Zimmerman  sezim...@einstein.yu.edu>>
> Sent: Wednesday, July 12, 2017 11:49 AM
> To: Turaga, Nitesh; Ramon Diaz-Uriarte; bioc-devel@r-project.org bioc-devel@r-project.org>
> Subject: RE: [Bioc-devel] Maintainers submit your SSH public keys
>
> Dear Nitesh,
>
> This may seem like an obvious question, but if we have not created a
> repository for our packages yet, should we create a GitHub repository using
> the directions here:
>
> https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/
> scenario-1-svn-to-github.md
>
>
> Thank you.
>
> Best,
> Sam
> 
> From: Bioc-devel [bioc-devel-boun...@r-project.org bioc-devel-boun...@r-project.org>] on behalf of Turaga, Nitesh
> [nitesh.tur...@roswellpark.org<mailto:nitesh.tur...@roswellpark.org>]
> Sent: Wednesday, July 12, 2017 11:29 AM
> To: Ramon Diaz-Uriarte; bioc-devel@r-project.org bioc-devel@r-project.org>
> Subject: Re: [Bioc-devel] Maintainers submit your SSH public keys
>
> Hi Ramon,
>
> This is a good question. Your key will be processed every 24 hours. If you
> have already submitted, then, you should be able to work through the
> documentation provided
> (https://github.com/Bioconductor/bioc_git_transition/tree/master/doc).
> Working through the documentation to check everything is in order helps
> everyone in the Bioconductor community too.
>
> Or a simple way to check is, make a change in your cloned package, ideally
> it is a �version bump� in the DESCRIPTION file. Then, try to git add �>
> commit �> push the change up to the new git server. These steps are given
> in our documentation,
>
> https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/
> scenari
> o-11-maintain-without-github.md#clone-and-setup-the-
> package-on-your-local-m
> achine
>
>
> https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/
> scenari
> o-11-maintain-without-github.md#make-and-commit-changes-to-
> your-local-repos
> itory
>
>
> We appreciate feedback on this.
>
> Best,
>
> Nitesh
>
> P.S We have already processed your previous submission. Don�t worry, we
> don�t process duplicate submissions.
>
>
> Dear Nitesh,
>
> I just filled it up again, though I think I did fill up and hit
> send/submit
> a few days ago. Is there a way for me to confirm it has worked?
>
>
> Best,
>
>
> R.
>
>
>
> On Wed, 12-07-2017, at 14:50:14, Turaga, Nitesh
> mailto:nitesh.tur...@roswellpark.org>>
> wrote:
> Hi Maintainers,
>
> Please submit your (SSH public key or GitHub id) and SVN id in this
> google
> form https://goo.gl/forms/eg36vcBkIUjfZfLe2. It will only take a minute
> [https://lh6.googleusercontent.com/aTIh4yWF4TsFYR95qIA_
> lBuCgvLJ88Q4WzDmdBuie6ndQirxWI0jhfRBF7eO-n3W6SE=w1200-h630-p]<
> https://goo.gl/forms/eg36vcBkIUjfZfLe2>
>
> git / svn transition: ssh keys<https://goo.gl/forms/eg36vcBkIUjfZfLe2>
> goo.gl<http://goo.gl/>
> Use this form to link your existing svn credentials with access
> permissions to the new Bioconductor git repository. To do this, we need an
>

Re: [Bioc-devel] Maintainers submit your SSH public keys

2017-07-13 Thread Jason Serviss
Hello,

What exactly is ment with “Github id”? My Github username?

Kind Regards,
Jason


On 12 Jul 2017, at 18:16, Turaga, Nitesh 
mailto:nitesh.tur...@roswellpark.org>> wrote:

Hi Samuel,


This is a great question.


You are not required to create a Github repository for your package. But, if 
you are actively maintaining your package, and would like to take advantage of 
the social coding features and the extended Bioconductor community it is a 
really good idea.


If you want to just maintain it on our Git server, once you have SSH access, 
you are welcome to do that as well. This is highlighted in our documentation 
https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenario-11-maintain-without-github.md.


We welcome feedback on the documentation, and FAQ section 
(https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/faq.md)



Best Regards,


Nitesh




From: Samuel E Zimmerman 
mailto:sezim...@einstein.yu.edu>>
Sent: Wednesday, July 12, 2017 11:49 AM
To: Turaga, Nitesh; Ramon Diaz-Uriarte; 
bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>
Subject: RE: [Bioc-devel] Maintainers submit your SSH public keys

Dear Nitesh,

This may seem like an obvious question, but if we have not created a repository 
for our packages yet, should we create a GitHub repository using the directions 
here:

https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenario-1-svn-to-github.md


Thank you.

Best,
Sam

From: Bioc-devel 
[bioc-devel-boun...@r-project.org<mailto:bioc-devel-boun...@r-project.org>] on 
behalf of Turaga, Nitesh 
[nitesh.tur...@roswellpark.org<mailto:nitesh.tur...@roswellpark.org>]
Sent: Wednesday, July 12, 2017 11:29 AM
To: Ramon Diaz-Uriarte; 
bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>
Subject: Re: [Bioc-devel] Maintainers submit your SSH public keys

Hi Ramon,

This is a good question. Your key will be processed every 24 hours. If you
have already submitted, then, you should be able to work through the
documentation provided
(https://github.com/Bioconductor/bioc_git_transition/tree/master/doc).
Working through the documentation to check everything is in order helps
everyone in the Bioconductor community too.

Or a simple way to check is, make a change in your cloned package, ideally
it is a �version bump� in the DESCRIPTION file. Then, try to git add �>
commit �> push the change up to the new git server. These steps are given
in our documentation,

https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenari
o-11-maintain-without-github.md#clone-and-setup-the-package-on-your-local-m
achine


https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenari
o-11-maintain-without-github.md#make-and-commit-changes-to-your-local-repos
itory


We appreciate feedback on this.

Best,

Nitesh

P.S We have already processed your previous submission. Don�t worry, we
don�t process duplicate submissions.


Dear Nitesh,

I just filled it up again, though I think I did fill up and hit
send/submit
a few days ago. Is there a way for me to confirm it has worked?


Best,


R.



On Wed, 12-07-2017, at 14:50:14, Turaga, Nitesh
mailto:nitesh.tur...@roswellpark.org>> wrote:
Hi Maintainers,

Please submit your (SSH public key or GitHub id) and SVN id in this
google
form https://goo.gl/forms/eg36vcBkIUjfZfLe2. It will only take a minute
[https://lh6.googleusercontent.com/aTIh4yWF4TsFYR95qIA_lBuCgvLJ88Q4WzDmdBuie6ndQirxWI0jhfRBF7eO-n3W6SE=w1200-h630-p]<https://goo.gl/forms/eg36vcBkIUjfZfLe2>

git / svn transition: ssh keys<https://goo.gl/forms/eg36vcBkIUjfZfLe2>
goo.gl<http://goo.gl/>
Use this form to link your existing svn credentials with access permissions to 
the new Bioconductor git repository. To do this, we need an ssh public key. You 
might have added these to github, see https://github.com/your-github-id.keys. 
Alternatively, you may provide the ssh public key directly, e.g., copy-pasting 
~/.ssh/id_rsa.pub. To generate ssh key pairs, see 
https://help.github.com/articles/generating-a-new-ssh-key-and-adding-it-to-the-ssh-agent/



or
less.

This is a crucial step to the transition, which is going to happen soon.
You will be able to test/complain/learn about the new git server during
Bioc2017 (Boston - July 26th onwards), and will be good to go from the
day
of transition. It is critical for maintainers who are actively
maintaining
their package on Bioconductor.

We have received very few SSH public keys so far from the 1300+
maintainers in Bioconductor.


Best Regards,

Nitesh




This email message may contain legally privileged and/or confidential
information.  If you are not the intended recipient(s), or the employee
or agent responsible for the delivery of this message to the intended
recipient(s), you are hereby notified that any disclosure, copying,
distribution, or use of th

Re: [Bioc-devel] Maintainers submit your SSH public keys

2017-07-12 Thread Turaga, Nitesh
Hi Samuel,


This is a great question.


You are not required to create a Github repository for your package. But, if 
you are actively maintaining your package, and would like to take advantage of 
the social coding features and the extended Bioconductor community it is a 
really good idea.


If you want to just maintain it on our Git server, once you have SSH access, 
you are welcome to do that as well. This is highlighted in our documentation 
https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenario-11-maintain-without-github.md.


We welcome feedback on the documentation, and FAQ section 
(https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/faq.md)



Best Regards,


Nitesh




From: Samuel E Zimmerman 
Sent: Wednesday, July 12, 2017 11:49 AM
To: Turaga, Nitesh; Ramon Diaz-Uriarte; bioc-devel@r-project.org
Subject: RE: [Bioc-devel] Maintainers submit your SSH public keys

Dear Nitesh,

This may seem like an obvious question, but if we have not created a repository 
for our packages yet, should we create a GitHub repository using the directions 
here:

https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenario-1-svn-to-github.md


 Thank you.

Best,
Sam

From: Bioc-devel [bioc-devel-boun...@r-project.org] on behalf of Turaga, Nitesh 
[nitesh.tur...@roswellpark.org]
Sent: Wednesday, July 12, 2017 11:29 AM
To: Ramon Diaz-Uriarte; bioc-devel@r-project.org
Subject: Re: [Bioc-devel] Maintainers submit your SSH public keys

Hi Ramon,

This is a good question. Your key will be processed every 24 hours. If you
have already submitted, then, you should be able to work through the
documentation provided
(https://github.com/Bioconductor/bioc_git_transition/tree/master/doc).
Working through the documentation to check everything is in order helps
everyone in the Bioconductor community too.

Or a simple way to check is, make a change in your cloned package, ideally
it is a �version bump� in the DESCRIPTION file. Then, try to git add �>
commit �> push the change up to the new git server. These steps are given
in our documentation,

https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenari
o-11-maintain-without-github.md#clone-and-setup-the-package-on-your-local-m
achine


https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenari
o-11-maintain-without-github.md#make-and-commit-changes-to-your-local-repos
itory


We appreciate feedback on this.

Best,

Nitesh

P.S We have already processed your previous submission. Don�t worry, we
don�t process duplicate submissions.


>Dear Nitesh,
>
>I just filled it up again, though I think I did fill up and hit
>send/submit
>a few days ago. Is there a way for me to confirm it has worked?
>
>
>Best,
>
>
>R.
>
>
>
>On Wed, 12-07-2017, at 14:50:14, Turaga, Nitesh
> wrote:
>> Hi Maintainers,
>>
>> Please submit your (SSH public key or GitHub id) and SVN id in this
>>google
>> form https://goo.gl/forms/eg36vcBkIUjfZfLe2. It will only take a minute
[https://lh6.googleusercontent.com/aTIh4yWF4TsFYR95qIA_lBuCgvLJ88Q4WzDmdBuie6ndQirxWI0jhfRBF7eO-n3W6SE=w1200-h630-p]<https://goo.gl/forms/eg36vcBkIUjfZfLe2>

git / svn transition: ssh keys<https://goo.gl/forms/eg36vcBkIUjfZfLe2>
goo.gl
Use this form to link your existing svn credentials with access permissions to 
the new Bioconductor git repository. To do this, we need an ssh public key. You 
might have added these to github, see https://github.com/your-github-id.keys. 
Alternatively, you may provide the ssh public key directly, e.g., copy-pasting 
~/.ssh/id_rsa.pub. To generate ssh key pairs, see 
https://help.github.com/articles/generating-a-new-ssh-key-and-adding-it-to-the-ssh-agent/



>>or
>> less.
>>
>> This is a crucial step to the transition, which is going to happen soon.
>> You will be able to test/complain/learn about the new git server during
>> Bioc2017 (Boston - July 26th onwards), and will be good to go from the
>>day
>> of transition. It is critical for maintainers who are actively
>>maintaining
>> their package on Bioconductor.
>>
>> We have received very few SSH public keys so far from the 1300+
>> maintainers in Bioconductor.
>>
>>
>> Best Regards,
>>
>> Nitesh
>>
>>
>>
>>
>> This email message may contain legally privileged and/or confidential
>>information.  If you are not the intended recipient(s), or the employee
>>or agent responsible for the delivery of this message to the intended
>>recipient(s), you are hereby notified that any disclosure, copying,
>>distribution, or use of this email message is prohibited.  If you have
>>received this message in error, please notify the sender immedia

Re: [Bioc-devel] Maintainers submit your SSH public keys

2017-07-12 Thread Samuel E Zimmerman
Dear Nitesh,

This may seem like an obvious question, but if we have not created a repository 
for our packages yet, should we create a GitHub repository using the directions 
here: 

https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenario-1-svn-to-github.md


 Thank you.

Best,
Sam

From: Bioc-devel [bioc-devel-boun...@r-project.org] on behalf of Turaga, Nitesh 
[nitesh.tur...@roswellpark.org]
Sent: Wednesday, July 12, 2017 11:29 AM
To: Ramon Diaz-Uriarte; bioc-devel@r-project.org
Subject: Re: [Bioc-devel] Maintainers submit your SSH public keys

Hi Ramon,

This is a good question. Your key will be processed every 24 hours. If you
have already submitted, then, you should be able to work through the
documentation provided
(https://github.com/Bioconductor/bioc_git_transition/tree/master/doc).
Working through the documentation to check everything is in order helps
everyone in the Bioconductor community too.

Or a simple way to check is, make a change in your cloned package, ideally
it is a ³version bump² in the DESCRIPTION file. Then, try to git add ‹>
commit ‹> push the change up to the new git server. These steps are given
in our documentation,

https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenari
o-11-maintain-without-github.md#clone-and-setup-the-package-on-your-local-m
achine


https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenari
o-11-maintain-without-github.md#make-and-commit-changes-to-your-local-repos
itory


We appreciate feedback on this.

Best,

Nitesh

P.S We have already processed your previous submission. Don¹t worry, we
don¹t process duplicate submissions.


>Dear Nitesh,
>
>I just filled it up again, though I think I did fill up and hit
>send/submit
>a few days ago. Is there a way for me to confirm it has worked?
>
>
>Best,
>
>
>R.
>
>
>
>On Wed, 12-07-2017, at 14:50:14, Turaga, Nitesh
> wrote:
>> Hi Maintainers,
>>
>> Please submit your (SSH public key or GitHub id) and SVN id in this
>>google
>> form https://goo.gl/forms/eg36vcBkIUjfZfLe2. It will only take a minute
>>or
>> less.
>>
>> This is a crucial step to the transition, which is going to happen soon.
>> You will be able to test/complain/learn about the new git server during
>> Bioc2017 (Boston - July 26th onwards), and will be good to go from the
>>day
>> of transition. It is critical for maintainers who are actively
>>maintaining
>> their package on Bioconductor.
>>
>> We have received very few SSH public keys so far from the 1300+
>> maintainers in Bioconductor.
>>
>>
>> Best Regards,
>>
>> Nitesh
>>
>>
>>
>>
>> This email message may contain legally privileged and/or confidential
>>information.  If you are not the intended recipient(s), or the employee
>>or agent responsible for the delivery of this message to the intended
>>recipient(s), you are hereby notified that any disclosure, copying,
>>distribution, or use of this email message is prohibited.  If you have
>>received this message in error, please notify the sender immediately by
>>e-mail and delete this email message from your computer. Thank you.
>> ___
>> Bioc-devel@r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>
>
>--
>Ramon Diaz-Uriarte
>Department of Biochemistry, Lab B-25
>Facultad de Medicina
>Universidad Autónoma de Madrid
>Arzobispo Morcillo, 4
>28029 Madrid
>Spain
>
>Phone: +34-91-497-2412
>
>Email: rdia...@gmail.com
>   ramon.d...@iib.uam.es
>
>http://ligarto.org/rdiaz



This email message may contain legally privileged and/or confidential 
information.  If you are not the intended recipient(s), or the employee or 
agent responsible for the delivery of this message to the intended 
recipient(s), you are hereby notified that any disclosure, copying, 
distribution, or use of this email message is prohibited.  If you have received 
this message in error, please notify the sender immediately by e-mail and 
delete this email message from your computer. Thank you.
___
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel

___
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel


Re: [Bioc-devel] Maintainers submit your SSH public keys

2017-07-12 Thread Turaga, Nitesh
Hi Ramon,

This is a good question. Your key will be processed every 24 hours. If you
have already submitted, then, you should be able to work through the
documentation provided
(https://github.com/Bioconductor/bioc_git_transition/tree/master/doc).
Working through the documentation to check everything is in order helps
everyone in the Bioconductor community too.

Or a simple way to check is, make a change in your cloned package, ideally
it is a ³version bump² in the DESCRIPTION file. Then, try to git add ‹>
commit ‹> push the change up to the new git server. These steps are given
in our documentation,

https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenari
o-11-maintain-without-github.md#clone-and-setup-the-package-on-your-local-m
achine


https://github.com/Bioconductor/bioc_git_transition/blob/master/doc/scenari
o-11-maintain-without-github.md#make-and-commit-changes-to-your-local-repos
itory


We appreciate feedback on this.

Best,

Nitesh  

P.S We have already processed your previous submission. Don¹t worry, we
don¹t process duplicate submissions.


>Dear Nitesh,
>
>I just filled it up again, though I think I did fill up and hit
>send/submit
>a few days ago. Is there a way for me to confirm it has worked?
>
>
>Best,
>
>
>R.
>
>
>
>On Wed, 12-07-2017, at 14:50:14, Turaga, Nitesh
> wrote:
>> Hi Maintainers,
>>
>> Please submit your (SSH public key or GitHub id) and SVN id in this
>>google
>> form https://goo.gl/forms/eg36vcBkIUjfZfLe2. It will only take a minute
>>or
>> less.
>>
>> This is a crucial step to the transition, which is going to happen soon.
>> You will be able to test/complain/learn about the new git server during
>> Bioc2017 (Boston - July 26th onwards), and will be good to go from the
>>day
>> of transition. It is critical for maintainers who are actively
>>maintaining
>> their package on Bioconductor.
>>
>> We have received very few SSH public keys so far from the 1300+
>> maintainers in Bioconductor.
>>
>>
>> Best Regards,
>>
>> Nitesh
>>
>>
>>
>>
>> This email message may contain legally privileged and/or confidential
>>information.  If you are not the intended recipient(s), or the employee
>>or agent responsible for the delivery of this message to the intended
>>recipient(s), you are hereby notified that any disclosure, copying,
>>distribution, or use of this email message is prohibited.  If you have
>>received this message in error, please notify the sender immediately by
>>e-mail and delete this email message from your computer. Thank you.
>> ___
>> Bioc-devel@r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>
>
>-- 
>Ramon Diaz-Uriarte
>Department of Biochemistry, Lab B-25
>Facultad de Medicina
>Universidad Autónoma de Madrid
>Arzobispo Morcillo, 4
>28029 Madrid
>Spain
>
>Phone: +34-91-497-2412
>
>Email: rdia...@gmail.com
>   ramon.d...@iib.uam.es
>
>http://ligarto.org/rdiaz



This email message may contain legally privileged and/or confidential 
information.  If you are not the intended recipient(s), or the employee or 
agent responsible for the delivery of this message to the intended 
recipient(s), you are hereby notified that any disclosure, copying, 
distribution, or use of this email message is prohibited.  If you have received 
this message in error, please notify the sender immediately by e-mail and 
delete this email message from your computer. Thank you.
___
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel


[Bioc-devel] Maintainers submit your SSH public keys

2017-07-12 Thread Turaga, Nitesh
Hi Maintainers,

Please submit your (SSH public key or GitHub id) and SVN id in this google
form https://goo.gl/forms/eg36vcBkIUjfZfLe2. It will only take a minute or
less.

This is a crucial step to the transition, which is going to happen soon.
You will be able to test/complain/learn about the new git server during
Bioc2017 (Boston - July 26th onwards), and will be good to go from the day
of transition. It is critical for maintainers who are actively maintaining
their package on Bioconductor.

We have received very few SSH public keys so far from the 1300+
maintainers in Bioconductor.


Best Regards,

Nitesh




This email message may contain legally privileged and/or confidential 
information.  If you are not the intended recipient(s), or the employee or 
agent responsible for the delivery of this message to the intended 
recipient(s), you are hereby notified that any disclosure, copying, 
distribution, or use of this email message is prohibited.  If you have received 
this message in error, please notify the sender immediately by e-mail and 
delete this email message from your computer. Thank you.
___
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel