Re: [Bioc-devel] Need some help to submit a R package.
The status of your package is unchanged from before; wait for the
reviewer to comment further on your package. Martin
On 05/01/2018 01:30 AM, Pijush Das wrote:
Dear Sir,
Please inform me the current status of the package named "sigFeature".
The package link is given below.
https://github.com/Bioconductor/Contributions/issues/713
Thank you
regards
Pijush
On Fri, Apr 27, 2018 at 7:00 PM, Pijush Das <mailto:topij...@gmail.com>> wrote:
Now it is opening. It may be some kind of problem is there with the
internet connection.
On Fri, Apr 27, 2018 at 6:56 PM, Shepherd, Lori
mailto:lori.sheph...@roswellpark.org>> wrote:
I am still able to open the link:
https://github.com/Bioconductor/Contributions/issues/713
<https://github.com/Bioconductor/Contributions/issues/713>
Perhaps there is some firewall or ani-virus program you are
running that is blocking access?
When you try to go to the link, what message is displayed?
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
*From:* Bioc-devel mailto:bioc-devel-boun...@r-project.org>> on behalf of
Shepherd, Lori
*Sent:* Friday, April 27, 2018 8:18:23 AM
*To:* Pijush Das; Morgan, Martin
*Cc:* bioc-devel@r-project.org <mailto:bioc-devel@r-project.org>
*Subject:* Re: [Bioc-devel] Need some help to submit a R package.
I am able to open this link. Perhaps it was an intermittent
internet connection issue? Are you able to open the link now?
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Pijush Das mailto:topij...@gmail.com>>
Sent: Friday, April 27, 2018 7:06:07 AM
To: Morgan, Martin
Cc: Shepherd, Lori; bioc-devel@r-project.org
<mailto:bioc-devel@r-project.org>
Subject: Re: [Bioc-devel] Need some help to submit a R package.
Dear Sir,
I have found some problem in github link given below:
https://github.com/Bioconductor/Contributions/issues/713
<https://github.com/Bioconductor/Contributions/issues/713>
The link is not opening. Is there any problem in github repository?
Please check it.
Thank you
regards
Pijush
On Thu, Apr 26, 2018 at 2:32 PM, Martin Morgan
mailto:martin.mor...@roswellpark.org><mailto:martin.mor...@roswellpark.org
<mailto:martin.mor...@roswellpark.org>>> wrote:
Wait for the reviewer to comment further on your package.
On 04/26/2018 02:20 AM, Pijush Das wrote:
Dear Sir,
I have found that my package sigFeature had passed all the built
test without errors or warnings
on all platforms.
What should I do next ?
regards
Pijush
On Tue, Apr 24, 2018 at 10:56 PM, Shepherd, Lori
mailto:lori.sheph...@roswellpark.org><mailto:lori.sheph...@roswellpark.org
<mailto:lori.sheph...@roswellpark.org>>
<mailto:lori.sheph...@roswellpark.org<mailto:lori.sheph...@roswellpark.org
<mailto:lori.sheph...@roswellpark.org%3Cmailto:lori.sheph...@roswellpark.org>>>>
wrote:
It doesn't look like the webhook was ever initialized
Please follow the instructions here:
https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#adding-a-web-hook
<https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#adding-a-web-hook>
<https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#adding-a-web-hook
<https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#adding-a-web-hook>>
After the webhook is set up you will need to do another
version bump
to trigger the build - Please post further correspondence
regarding
your package submission on the open github issue
https://github.com/Bioconductor/Contributions/issues/713
<https://github.com/Bioconductor/Contributions/issues/713>
<https://github.com/Bioconductor/Contributions/issues/713
<https://github.com/Bioconductor/Contributions/issues/713>>
Lori Shepherd
Bioconductor Core Team
Re: [Bioc-devel] Need some help to submit a R package.
Dear Sir, Please inform me the current status of the package named "sigFeature". The package link is given below. https://github.com/Bioconductor/Contributions/issues/713 Thank you regards Pijush On Fri, Apr 27, 2018 at 7:00 PM, Pijush Das wrote: > > Now it is opening. It may be some kind of problem is there with the > internet connection. > > > > > On Fri, Apr 27, 2018 at 6:56 PM, Shepherd, Lori < > lori.sheph...@roswellpark.org> wrote: > >> I am still able to open the link: >> >> https://github.com/Bioconductor/Contributions/issues/713 >> >> >> Perhaps there is some firewall or ani-virus program you are running that >> is blocking access? >> >> >> When you try to go to the link, what message is displayed? >> >> >> Lori Shepherd >> >> Bioconductor Core Team >> >> Roswell Park Cancer Institute >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> ------ >> *From:* Bioc-devel on behalf of >> Shepherd, Lori >> *Sent:* Friday, April 27, 2018 8:18:23 AM >> *To:* Pijush Das; Morgan, Martin >> *Cc:* bioc-devel@r-project.org >> *Subject:* Re: [Bioc-devel] Need some help to submit a R package. >> >> I am able to open this link. Perhaps it was an intermittent internet >> connection issue? Are you able to open the link now? >> >> >> Lori Shepherd >> >> Bioconductor Core Team >> >> Roswell Park Cancer Institute >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> >> >> From: Pijush Das >> Sent: Friday, April 27, 2018 7:06:07 AM >> To: Morgan, Martin >> Cc: Shepherd, Lori; bioc-devel@r-project.org >> Subject: Re: [Bioc-devel] Need some help to submit a R package. >> >> Dear Sir, >> >> >> I have found some problem in github link given below: >> https://github.com/Bioconductor/Contributions/issues/713 >> The link is not opening. Is there any problem in github repository? >> Please check it. >> >> >> Thank you >> >> >> regards >> Pijush >> >> >> >> >> >> >> >> On Thu, Apr 26, 2018 at 2:32 PM, Martin Morgan < >> martin.mor...@roswellpark.org<mailto:martin.mor...@roswellpark.org>> >> wrote: >> Wait for the reviewer to comment further on your package. >> >> On 04/26/2018 02:20 AM, Pijush Das wrote: >> Dear Sir, >> >> >> I have found that my package sigFeature had passed all the built test >> without errors or warnings >> on all platforms. >> What should I do next ? >> >> >> >> >> >> regards >> Pijush >> >> >> >> >> >> >> >> >> >> >> >> >> On Tue, Apr 24, 2018 at 10:56 PM, Shepherd, Lori < >> lori.sheph...@roswellpark.org<mailto:lori.sheph...@roswellpark.org> < >> mailto:lori.sheph...@roswellpark.org<mailto:lori.sheph...@roswellpark.org >> mailto:lori.sheph...@roswellpark.org>>>> >> wrote: >> >> It doesn't look like the webhook was ever initialized >> >> >> Please follow the instructions here: >> >> https://github.com/Bioconductor/Contributions/blob/master/ >> CONTRIBUTING.md#adding-a-web-hook >> <https://github.com/Bioconductor/Contributions/blob/master/ >> CONTRIBUTING.md#adding-a-web-hook> >> >> After the webhook is set up you will need to do another version bump >> to trigger the build - Please post further correspondence regarding >> your package submission on the open github issue >> >> >> https://github.com/Bioconductor/Contributions/issues/713 >> <https://github.com/Bioconductor/Contributions/issues/713> >> >> >> Lori Shepherd >> >> Bioconductor Core Team >> >> Roswell Park Cancer Institute >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> >> >> >> *From:* Pijush Das mailto:topij...@gmail.com> < >> mailto:topij...@gmail.com<mailto:topij...@gmail.com >> mailto:topij...@gmail.com>>>> >> *Sent
Re: [Bioc-devel] Need some help to submit a R package.
I am still able to open the link:
https://github.com/Bioconductor/Contributions/issues/713
Perhaps there is some firewall or ani-virus program you are running that is
blocking access?
When you try to go to the link, what message is displayed?
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Bioc-devel on behalf of Shepherd, Lori
Sent: Friday, April 27, 2018 8:18:23 AM
To: Pijush Das; Morgan, Martin
Cc: bioc-devel@r-project.org
Subject: Re: [Bioc-devel] Need some help to submit a R package.
I am able to open this link. Perhaps it was an intermittent internet
connection issue? Are you able to open the link now?
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Pijush Das
Sent: Friday, April 27, 2018 7:06:07 AM
To: Morgan, Martin
Cc: Shepherd, Lori; bioc-devel@r-project.org
Subject: Re: [Bioc-devel] Need some help to submit a R package.
Dear Sir,
I have found some problem in github link given below:
https://github.com/Bioconductor/Contributions/issues/713
The link is not opening. Is there any problem in github repository?
Please check it.
Thank you
regards
Pijush
On Thu, Apr 26, 2018 at 2:32 PM, Martin Morgan
mailto:martin.mor...@roswellpark.org>> wrote:
Wait for the reviewer to comment further on your package.
On 04/26/2018 02:20 AM, Pijush Das wrote:
Dear Sir,
I have found that my package sigFeature had passed all the built test without
errors or warnings
on all platforms.
What should I do next ?
regards
Pijush
On Tue, Apr 24, 2018 at 10:56 PM, Shepherd, Lori
mailto:lori.sheph...@roswellpark.org>
<mailto:lori.sheph...@roswellpark.org<mailto:lori.sheph...@roswellpark.org>>>
wrote:
It doesn't look like the webhook was ever initialized
Please follow the instructions here:
https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#adding-a-web-hook
<https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#adding-a-web-hook>
After the webhook is set up you will need to do another version bump
to trigger the build - Please post further correspondence regarding
your package submission on the open github issue
https://github.com/Bioconductor/Contributions/issues/713
<https://github.com/Bioconductor/Contributions/issues/713>
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
*From:* Pijush Das mailto:topij...@gmail.com>
<mailto:topij...@gmail.com<mailto:topij...@gmail.com>>>
*Sent:* Tuesday, April 24, 2018 11:33:14 AM
*To:* Shepherd, Lori
*Cc:* Morgan, Martin;
bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>
<mailto:bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>>
*Subject:* Re: [Bioc-devel] Need some help to submit a R package.
Dear sir,
I have uploaded the sigFeature package ( Version: 0.99.1) in the
existing git repository and did a version bump. The link is given below.
https://github.com/pijush1285/sigFeature
<https://github.com/pijush1285/sigFeature>
But still now I am not getting any response.
Is there required to add the web hook again ?
Thank you
regards
Pijush
On Tue, Apr 24, 2018 at 5:34 PM, Shepherd, Lori
mailto:lori.sheph...@roswellpark.org>
<mailto:lori.sheph...@roswellpark.org<mailto:lori.sheph...@roswellpark.org>>>
wrote:
We like to keep track of the changes and have the reviews in one
place. If possible it would be better to replace the contents
of existing git repository and do a version bump.
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
*From:* Bioc-devel
mailto:bioc-devel-boun...@r-project.org>
<mailto:bioc-devel-boun...@r-project.org<mailto:bioc-devel-boun...@r-project.org>>>
on behalf of Pijush
Das mailto:topij...@gmail.com>
<mailto:topij...@gmail.com<mailto:topij...@gmail.com>>>
*Sent:* Tuesday, April 24, 2018 7:43:04 AM
*To:* Morgan, Martin
*Cc:* bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>
<mailto:bioc-devel@r-project.org<
Re: [Bioc-devel] Need some help to submit a R package.
Now it is opening. It may be some kind of problem is there with the internet connection. On Fri, Apr 27, 2018 at 6:56 PM, Shepherd, Lori < lori.sheph...@roswellpark.org> wrote: > I am still able to open the link: > > https://github.com/Bioconductor/Contributions/issues/713 > > > Perhaps there is some firewall or ani-virus program you are running that > is blocking access? > > > When you try to go to the link, what message is displayed? > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *From:* Bioc-devel on behalf of > Shepherd, Lori > *Sent:* Friday, April 27, 2018 8:18:23 AM > *To:* Pijush Das; Morgan, Martin > *Cc:* bioc-devel@r-project.org > *Subject:* Re: [Bioc-devel] Need some help to submit a R package. > > I am able to open this link. Perhaps it was an intermittent internet > connection issue? Are you able to open the link now? > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > > ________ > From: Pijush Das > Sent: Friday, April 27, 2018 7:06:07 AM > To: Morgan, Martin > Cc: Shepherd, Lori; bioc-devel@r-project.org > Subject: Re: [Bioc-devel] Need some help to submit a R package. > > Dear Sir, > > > I have found some problem in github link given below: > https://github.com/Bioconductor/Contributions/issues/713 > The link is not opening. Is there any problem in github repository? > Please check it. > > > Thank you > > > regards > Pijush > > > > > > > > On Thu, Apr 26, 2018 at 2:32 PM, Martin Morgan < > martin.mor...@roswellpark.org<mailto:martin.mor...@roswellpark.org>> > wrote: > Wait for the reviewer to comment further on your package. > > On 04/26/2018 02:20 AM, Pijush Das wrote: > Dear Sir, > > > I have found that my package sigFeature had passed all the built test > without errors or warnings > on all platforms. > What should I do next ? > > > > > > regards > Pijush > > > > > > > > > > > > > On Tue, Apr 24, 2018 at 10:56 PM, Shepherd, Lori < > lori.sheph...@roswellpark.org<mailto:lori.sheph...@roswellpark.org> < > mailto:lori.sheph...@roswellpark.org<mailto:lori.sheph...@roswellpark.org > mailto:lori.sheph...@roswellpark.org>>>> > wrote: > > It doesn't look like the webhook was ever initialized > > > Please follow the instructions here: > > https://github.com/Bioconductor/Contributions/ > blob/master/CONTRIBUTING.md#adding-a-web-hook > <https://github.com/Bioconductor/Contributions/ > blob/master/CONTRIBUTING.md#adding-a-web-hook> > > After the webhook is set up you will need to do another version bump > to trigger the build - Please post further correspondence regarding > your package submission on the open github issue > > > https://github.com/Bioconductor/Contributions/issues/713 > <https://github.com/Bioconductor/Contributions/issues/713> > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > > ---------------- > > *From:* Pijush Das mailto:topij...@gmail.com> < > mailto:topij...@gmail.com<mailto:topij...@gmail.com > mailto:topij...@gmail.com>>>> > *Sent:* Tuesday, April 24, 2018 11:33:14 AM > *To:* Shepherd, Lori > *Cc:* Morgan, Martin; bioc-devel@r-project.org bioc-devel@r-project.org> > <mailto:bioc-devel@r-project.org<mailto:bioc-devel@r-project.org > mailto:bioc-devel@r-project.org>>> > > *Subject:* Re: [Bioc-devel] Need some help to submit a R package. > Dear sir, > > > I have uploaded the sigFeature package ( Version: 0.99.1) in the > existing git repository and did a version bump. The link is given > below. > https://github.com/pijush1285/sigFeature > <https://github.com/pijush1285/sigFeature> > But still now I am not getting any response. > Is there required to add the web hook again ? > > Thank you > > regards > Pijush > > > > On Tue, Apr 24
Re: [Bioc-devel] Need some help to submit a R package.
I am able to open this link. Perhaps it was an intermittent internet
connection issue? Are you able to open the link now?
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Pijush Das
Sent: Friday, April 27, 2018 7:06:07 AM
To: Morgan, Martin
Cc: Shepherd, Lori; bioc-devel@r-project.org
Subject: Re: [Bioc-devel] Need some help to submit a R package.
Dear Sir,
I have found some problem in github link given below:
https://github.com/Bioconductor/Contributions/issues/713
The link is not opening. Is there any problem in github repository?
Please check it.
Thank you
regards
Pijush
On Thu, Apr 26, 2018 at 2:32 PM, Martin Morgan
mailto:martin.mor...@roswellpark.org>> wrote:
Wait for the reviewer to comment further on your package.
On 04/26/2018 02:20 AM, Pijush Das wrote:
Dear Sir,
I have found that my package sigFeature had passed all the built test without
errors or warnings
on all platforms.
What should I do next ?
regards
Pijush
On Tue, Apr 24, 2018 at 10:56 PM, Shepherd, Lori
mailto:lori.sheph...@roswellpark.org>
<mailto:lori.sheph...@roswellpark.org<mailto:lori.sheph...@roswellpark.org>>>
wrote:
It doesn't look like the webhook was ever initialized
Please follow the instructions here:
https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#adding-a-web-hook
<https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#adding-a-web-hook>
After the webhook is set up you will need to do another version bump
to trigger the build - Please post further correspondence regarding
your package submission on the open github issue
https://github.com/Bioconductor/Contributions/issues/713
<https://github.com/Bioconductor/Contributions/issues/713>
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
*From:* Pijush Das mailto:topij...@gmail.com>
<mailto:topij...@gmail.com<mailto:topij...@gmail.com>>>
*Sent:* Tuesday, April 24, 2018 11:33:14 AM
*To:* Shepherd, Lori
*Cc:* Morgan, Martin;
bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>
<mailto:bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>>
*Subject:* Re: [Bioc-devel] Need some help to submit a R package.
Dear sir,
I have uploaded the sigFeature package ( Version: 0.99.1) in the
existing git repository and did a version bump. The link is given below.
https://github.com/pijush1285/sigFeature
<https://github.com/pijush1285/sigFeature>
But still now I am not getting any response.
Is there required to add the web hook again ?
Thank you
regards
Pijush
On Tue, Apr 24, 2018 at 5:34 PM, Shepherd, Lori
mailto:lori.sheph...@roswellpark.org>
<mailto:lori.sheph...@roswellpark.org<mailto:lori.sheph...@roswellpark.org>>>
wrote:
We like to keep track of the changes and have the reviews in one
place. If possible it would be better to replace the contents
of existing git repository and do a version bump.
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
*From:* Bioc-devel
mailto:bioc-devel-boun...@r-project.org>
<mailto:bioc-devel-boun...@r-project.org<mailto:bioc-devel-boun...@r-project.org>>>
on behalf of Pijush
Das mailto:topij...@gmail.com>
<mailto:topij...@gmail.com<mailto:topij...@gmail.com>>>
*Sent:* Tuesday, April 24, 2018 7:43:04 AM
*To:* Morgan, Martin
*Cc:* bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>
<mailto:bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>>
*Subject:* Re: [Bioc-devel] Need some help to submit a R package.
Dear Sir,
I have solved most of the issues raised by the reviewers.
There were significant amount of changes in the original code.
So should we submit our package (sigFeature) as a new submission
or replace the contents of existing git repository with version
increment.
regards
Pijush
On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan <
martin.mor...@roswellpark.org<mailto:martin.mor...@roswellpark.org>
<mailto:martin.mor...@roswellpark.org<mailto
Re: [Bioc-devel] Need some help to submit a R package.
No Sir, Still now it is not opening. On Fri, Apr 27, 2018 at 5:48 PM, Shepherd, Lori < lori.sheph...@roswellpark.org> wrote: > I am able to open this link. Perhaps it was an intermittent internet > connection issue? Are you able to open the link now? > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *From:* Pijush Das > *Sent:* Friday, April 27, 2018 7:06:07 AM > *To:* Morgan, Martin > *Cc:* Shepherd, Lori; bioc-devel@r-project.org > *Subject:* Re: [Bioc-devel] Need some help to submit a R package. > > Dear Sir, > > > I have found some problem in github link given below: > https://github.com/Bioconductor/Contributions/issues/713 > The link is not opening. Is there any problem in github repository? > Please check it. > > > Thank you > > > regards > Pijush > > > > > > > > On Thu, Apr 26, 2018 at 2:32 PM, Martin Morgan < > martin.mor...@roswellpark.org> wrote: > > Wait for the reviewer to comment further on your package. > > On 04/26/2018 02:20 AM, Pijush Das wrote: > > Dear Sir, > > > I have found that my package sigFeature had passed all the built test > without errors or warnings > on all platforms. > What should I do next ? > > > > > > regards > Pijush > > > > > > > > > > > > > On Tue, Apr 24, 2018 at 10:56 PM, Shepherd, Lori < > lori.sheph...@roswellpark.org <mailto:lori.sheph...@roswellpark.org>> > wrote: > > It doesn't look like the webhook was ever initialized > > > Please follow the instructions here: > > https://github.com/Bioconductor/Contributions/blob/master/CO > NTRIBUTING.md#adding-a-web-hook > <https://github.com/Bioconductor/Contributions/blob/master/C > ONTRIBUTING.md#adding-a-web-hook> > > After the webhook is set up you will need to do another version bump > to trigger the build - Please post further correspondence regarding > your package submission on the open github issue > > > https://github.com/Bioconductor/Contributions/issues/713 > <https://github.com/Bioconductor/Contributions/issues/713> > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > > > > *From:* Pijush Das mailto:topij...@gmail.com>> > *Sent:* Tuesday, April 24, 2018 11:33:14 AM > *To:* Shepherd, Lori > *Cc:* Morgan, Martin; bioc-devel@r-project.org > <mailto:bioc-devel@r-project.org> > > *Subject:* Re: [Bioc-devel] Need some help to submit a R package. > Dear sir, > > > I have uploaded the sigFeature package ( Version: 0.99.1) in the > existing git repository and did a version bump. The link is given > below. > https://github.com/pijush1285/sigFeature > <https://github.com/pijush1285/sigFeature> > But still now I am not getting any response. > Is there required to add the web hook again ? > > Thank you > > regards > Pijush > > > > On Tue, Apr 24, 2018 at 5:34 PM, Shepherd, Lori > <mailto:lori.sheph...@roswellpark.org>> wrote: > > We like to keep track of the changes and have the reviews in one > place. If possible it would be better to replace the contents > of existing git repository and do a version bump. > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > > > > *From:* Bioc-devel <mailto:bioc-devel-boun...@r-project.org>> on behalf of Pijush > Das mailto:topij...@gmail.com>> > *Sent:* Tuesday, April 24, 2018 7:43:04 AM > *To:* Morgan, Martin > *Cc:* bioc-devel@r-project.org <mailto:bioc-devel@r-project.org> > *Subject:* Re: [Bioc-devel] Need some help to submit a R package. > Dear Sir, > > I have solved most of the issues raised by the reviewers. > There were significant amount of changes in the original code. > So
Re: [Bioc-devel] Need some help to submit a R package.
Dear Sir, I have found some problem in github link given below: https://github.com/Bioconductor/Contributions/issues/713 The link is not opening. Is there any problem in github repository? Please check it. Thank you regards Pijush On Thu, Apr 26, 2018 at 2:32 PM, Martin Morgan < martin.mor...@roswellpark.org> wrote: > Wait for the reviewer to comment further on your package. > > On 04/26/2018 02:20 AM, Pijush Das wrote: > >> Dear Sir, >> >> >> I have found that my package sigFeature had passed all the built test >> without errors or warnings >> on all platforms. >> What should I do next ? >> >> >> >> >> >> regards >> Pijush >> >> >> >> >> >> >> >> >> >> >> >> >> On Tue, Apr 24, 2018 at 10:56 PM, Shepherd, Lori < >> lori.sheph...@roswellpark.org <mailto:lori.sheph...@roswellpark.org>> >> wrote: >> >> It doesn't look like the webhook was ever initialized >> >> >> Please follow the instructions here: >> >> https://github.com/Bioconductor/Contributions/blob/master/ >> CONTRIBUTING.md#adding-a-web-hook >> <https://github.com/Bioconductor/Contributions/blob/master/ >> CONTRIBUTING.md#adding-a-web-hook> >> >> After the webhook is set up you will need to do another version bump >> to trigger the build - Please post further correspondence regarding >> your package submission on the open github issue >> >> >> https://github.com/Bioconductor/Contributions/issues/713 >> <https://github.com/Bioconductor/Contributions/issues/713> >> >> >> Lori Shepherd >> >> Bioconductor Core Team >> >> Roswell Park Cancer Institute >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> >> >> >> *From:* Pijush Das mailto:topij...@gmail.com>> >> *Sent:* Tuesday, April 24, 2018 11:33:14 AM >> *To:* Shepherd, Lori >> *Cc:* Morgan, Martin; bioc-devel@r-project.org >> <mailto:bioc-devel@r-project.org> >> >> *Subject:* Re: [Bioc-devel] Need some help to submit a R package. >> Dear sir, >> >> >> I have uploaded the sigFeature package ( Version: 0.99.1) in the >> existing git repository and did a version bump. The link is given >> below. >> https://github.com/pijush1285/sigFeature >> <https://github.com/pijush1285/sigFeature> >> But still now I am not getting any response. >> Is there required to add the web hook again ? >> >> Thank you >> >> regards >> Pijush >> >> >> >> On Tue, Apr 24, 2018 at 5:34 PM, Shepherd, Lori >> > <mailto:lori.sheph...@roswellpark.org>> wrote: >> >> We like to keep track of the changes and have the reviews in one >> place. If possible it would be better to replace the contents >> of existing git repository and do a version bump. >> >> >> Lori Shepherd >> >> Bioconductor Core Team >> >> Roswell Park Cancer Institute >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> >> >> >> *From:* Bioc-devel > <mailto:bioc-devel-boun...@r-project.org>> on behalf of Pijush >> Das mailto:topij...@gmail.com>> >> *Sent:* Tuesday, April 24, 2018 7:43:04 AM >> *To:* Morgan, Martin >> *Cc:* bioc-devel@r-project.org <mailto:bioc-devel@r-project.org> >> *Subject:* Re: [Bioc-devel] Need some help to submit a R package. >> Dear Sir, >> >> I have solved most of the issues raised by the reviewers. >> There were significant amount of changes in the original code. >> So should we submit our package (sigFeature) as a new submission >> or replace the contents of existing git repository with version >> increment. >> >> >> regards >> Pijush >> >> >> On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan < >> martin.mor...@roswellpark.org &
Re: [Bioc-devel] Need some help to submit a R package.
Wait for the reviewer to comment further on your package.
On 04/26/2018 02:20 AM, Pijush Das wrote:
Dear Sir,
I have found that my package sigFeature had passed all the built test
without errors or warnings
on all platforms.
What should I do next ?
regards
Pijush
On Tue, Apr 24, 2018 at 10:56 PM, Shepherd, Lori
mailto:lori.sheph...@roswellpark.org>>
wrote:
It doesn't look like the webhook was ever initialized
Please follow the instructions here:
https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#adding-a-web-hook
<https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#adding-a-web-hook>
After the webhook is set up you will need to do another version bump
to trigger the build - Please post further correspondence regarding
your package submission on the open github issue
https://github.com/Bioconductor/Contributions/issues/713
<https://github.com/Bioconductor/Contributions/issues/713>
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
*From:* Pijush Das mailto:topij...@gmail.com>>
*Sent:* Tuesday, April 24, 2018 11:33:14 AM
*To:* Shepherd, Lori
*Cc:* Morgan, Martin; bioc-devel@r-project.org
<mailto:bioc-devel@r-project.org>
*Subject:* Re: [Bioc-devel] Need some help to submit a R package.
Dear sir,
I have uploaded the sigFeature package ( Version: 0.99.1) in the
existing git repository and did a version bump. The link is given below.
https://github.com/pijush1285/sigFeature
<https://github.com/pijush1285/sigFeature>
But still now I am not getting any response.
Is there required to add the web hook again ?
Thank you
regards
Pijush
On Tue, Apr 24, 2018 at 5:34 PM, Shepherd, Lori
mailto:lori.sheph...@roswellpark.org>> wrote:
We like to keep track of the changes and have the reviews in one
place. If possible it would be better to replace the contents
of existing git repository and do a version bump.
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
*From:* Bioc-devel mailto:bioc-devel-boun...@r-project.org>> on behalf of Pijush
Das mailto:topij...@gmail.com>>
*Sent:* Tuesday, April 24, 2018 7:43:04 AM
*To:* Morgan, Martin
*Cc:* bioc-devel@r-project.org <mailto:bioc-devel@r-project.org>
*Subject:* Re: [Bioc-devel] Need some help to submit a R package.
Dear Sir,
I have solved most of the issues raised by the reviewers.
There were significant amount of changes in the original code.
So should we submit our package (sigFeature) as a new submission
or replace the contents of existing git repository with version
increment.
regards
Pijush
On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan <
martin.mor...@roswellpark.org
<mailto:martin.mor...@roswellpark.org>> wrote:
> If you are still having problems understanding warnings, it is
probably
> better to use the github issue -- it may take some time to get an
answer,
> because the reviewers have many responsibilities.
>
> It looks like your 'webhook' is not correct, and that you are not
changing
> the version of your package (from 0.99.0 to 0.99.1, 0.99.2, ...) when
you
> wish to generate another build report. @grimbough indicated in the
github
> issue how to address these problems.
>
> Martin
>
>
> On 04/16/2018 03:58 AM, Pijush Das wrote:
>
>> Dear Ruqian,
>>
>>
>> Yes sir, I have opened the build report which is a link to an HTML
page
>> with details.
>> But I unable to understand why the WARNING massages are showing.
>>
>> Three days before the other reviewers had made some comments and
asked me
>> to address
>> those issues and also told me to solve the NOTEs produced by
BioCheck.
>>
>> Presently I am working on the sigFeature package to address those
issues.
>> I shall communicate soon after solving those issues.
>>
>>
>> Thank you
>>
>>
Re: [Bioc-devel] Need some help to submit a R package.
Dear Sir, I have found that my package sigFeature had passed all the built test without errors or warnings on all platforms. What should I do next ? regards Pijush On Tue, Apr 24, 2018 at 10:56 PM, Shepherd, Lori < lori.sheph...@roswellpark.org> wrote: > It doesn't look like the webhook was ever initialized > > > Please follow the instructions here: > > https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md# > adding-a-web-hook > > After the webhook is set up you will need to do another version bump to > trigger the build - Please post further correspondence regarding your > package submission on the open github issue > > > https://github.com/Bioconductor/Contributions/issues/713 > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *From:* Pijush Das > *Sent:* Tuesday, April 24, 2018 11:33:14 AM > *To:* Shepherd, Lori > *Cc:* Morgan, Martin; bioc-devel@r-project.org > > *Subject:* Re: [Bioc-devel] Need some help to submit a R package. > > Dear sir, > > > I have uploaded the sigFeature package ( Version: 0.99.1) in the existing > git repository and did a version bump. The link is given below. > https://github.com/pijush1285/sigFeature > But still now I am not getting any response. > Is there required to add the web hook again ? > > Thank you > > regards > Pijush > > > > On Tue, Apr 24, 2018 at 5:34 PM, Shepherd, Lori < > lori.sheph...@roswellpark.org> wrote: > > We like to keep track of the changes and have the reviews in one place. > If possible it would be better to replace the contents of existing git > repository and do a version bump. > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *From:* Bioc-devel on behalf of Pijush > Das > *Sent:* Tuesday, April 24, 2018 7:43:04 AM > *To:* Morgan, Martin > *Cc:* bioc-devel@r-project.org > *Subject:* Re: [Bioc-devel] Need some help to submit a R package. > > Dear Sir, > > I have solved most of the issues raised by the reviewers. > There were significant amount of changes in the original code. > So should we submit our package (sigFeature) as a new submission > or replace the contents of existing git repository with version increment. > > > regards > Pijush > > > On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan < > martin.mor...@roswellpark.org> wrote: > > > If you are still having problems understanding warnings, it is probably > > better to use the github issue -- it may take some time to get an answer, > > because the reviewers have many responsibilities. > > > > It looks like your 'webhook' is not correct, and that you are not > changing > > the version of your package (from 0.99.0 to 0.99.1, 0.99.2, ...) when you > > wish to generate another build report. @grimbough indicated in the github > > issue how to address these problems. > > > > Martin > > > > > > On 04/16/2018 03:58 AM, Pijush Das wrote: > > > >> Dear Ruqian, > >> > >> > >> Yes sir, I have opened the build report which is a link to an HTML page > >> with details. > >> But I unable to understand why the WARNING massages are showing. > >> > >> Three days before the other reviewers had made some comments and asked > me > >> to address > >> those issues and also told me to solve the NOTEs produced by BioCheck. > >> > >> Presently I am working on the sigFeature package to address those > issues. > >> I shall communicate soon after solving those issues. > >> > >> > >> Thank you > >> > >> > >> Regards > >> Pijush > >> > >> > >> > >> On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu < > >> ruqi...@student.unimelb.edu.au> > >> wrote: > >> > >> Hi Pijush, > >>> > >>> Did you open the build report which is a link to an HTML page with > >>> details > >>> of the warning? > >>> > >>> > >>> Regards, > >>> Ruqian > >>> > >>> > >>> > >>> On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das > wrote: > >>> > >>> Dear Sir, &g
Re: [Bioc-devel] Need some help to submit a R package.
It doesn't look like the webhook was ever initialized Please follow the instructions here: https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#adding-a-web-hook After the webhook is set up you will need to do another version bump to trigger the build - Please post further correspondence regarding your package submission on the open github issue https://github.com/Bioconductor/Contributions/issues/713 Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Pijush Das Sent: Tuesday, April 24, 2018 11:33:14 AM To: Shepherd, Lori Cc: Morgan, Martin; bioc-devel@r-project.org Subject: Re: [Bioc-devel] Need some help to submit a R package. Dear sir, I have uploaded the sigFeature package ( Version: 0.99.1) in the existing git repository and did a version bump. The link is given below. https://github.com/pijush1285/sigFeature But still now I am not getting any response. Is there required to add the web hook again ? Thank you regards Pijush On Tue, Apr 24, 2018 at 5:34 PM, Shepherd, Lori mailto:lori.sheph...@roswellpark.org>> wrote: We like to keep track of the changes and have the reviews in one place. If possible it would be better to replace the contents of existing git repository and do a version bump. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel mailto:bioc-devel-boun...@r-project.org>> on behalf of Pijush Das mailto:topij...@gmail.com>> Sent: Tuesday, April 24, 2018 7:43:04 AM To: Morgan, Martin Cc: bioc-devel@r-project.org<mailto:bioc-devel@r-project.org> Subject: Re: [Bioc-devel] Need some help to submit a R package. Dear Sir, I have solved most of the issues raised by the reviewers. There were significant amount of changes in the original code. So should we submit our package (sigFeature) as a new submission or replace the contents of existing git repository with version increment. regards Pijush On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan < martin.mor...@roswellpark.org<mailto:martin.mor...@roswellpark.org>> wrote: > If you are still having problems understanding warnings, it is probably > better to use the github issue -- it may take some time to get an answer, > because the reviewers have many responsibilities. > > It looks like your 'webhook' is not correct, and that you are not changing > the version of your package (from 0.99.0 to 0.99.1, 0.99.2, ...) when you > wish to generate another build report. @grimbough indicated in the github > issue how to address these problems. > > Martin > > > On 04/16/2018 03:58 AM, Pijush Das wrote: > >> Dear Ruqian, >> >> >> Yes sir, I have opened the build report which is a link to an HTML page >> with details. >> But I unable to understand why the WARNING massages are showing. >> >> Three days before the other reviewers had made some comments and asked me >> to address >> those issues and also told me to solve the NOTEs produced by BioCheck. >> >> Presently I am working on the sigFeature package to address those issues. >> I shall communicate soon after solving those issues. >> >> >> Thank you >> >> >> Regards >> Pijush >> >> >> >> On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu < >> ruqi...@student.unimelb.edu.au<mailto:ruqi...@student.unimelb.edu.au>> >> wrote: >> >> Hi Pijush, >>> >>> Did you open the build report which is a link to an HTML page with >>> details >>> of the warning? >>> >>> >>> Regards, >>> Ruqian >>> >>> >>> >>> On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das >>> mailto:topij...@gmail.com>> wrote: >>> >>> Dear Sir, >>>> >>>> >>>> I have submitted an R package named "sigFeature" in Github and also >>>> Bioconductor 9 days before. >>>> The reviewers only said that there is some WARNING problem in the >>>> package >>>> in different platform. >>>> >>>> But after that they are not communicating any thing regarding the >>>> package. >>>> I have checked the package >>>> windows and Ubuntu it is working fine. >>>> >>>> I unable to understand what actually the problem is ? >>>> And the reviewers are not communicating about the problem. Though I am >>>> get
Re: [Bioc-devel] Need some help to submit a R package.
Dear sir, I have uploaded the sigFeature package ( Version: 0.99.1) in the existing git repository and did a version bump. The link is given below. https://github.com/pijush1285/sigFeature But still now I am not getting any response. Is there required to add the web hook again ? Thank you regards Pijush On Tue, Apr 24, 2018 at 5:34 PM, Shepherd, Lori < lori.sheph...@roswellpark.org> wrote: > We like to keep track of the changes and have the reviews in one place. > If possible it would be better to replace the contents of existing git > repository and do a version bump. > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *From:* Bioc-devel on behalf of Pijush > Das > *Sent:* Tuesday, April 24, 2018 7:43:04 AM > *To:* Morgan, Martin > *Cc:* bioc-devel@r-project.org > *Subject:* Re: [Bioc-devel] Need some help to submit a R package. > > Dear Sir, > > I have solved most of the issues raised by the reviewers. > There were significant amount of changes in the original code. > So should we submit our package (sigFeature) as a new submission > or replace the contents of existing git repository with version increment. > > > regards > Pijush > > > On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan < > martin.mor...@roswellpark.org> wrote: > > > If you are still having problems understanding warnings, it is probably > > better to use the github issue -- it may take some time to get an answer, > > because the reviewers have many responsibilities. > > > > It looks like your 'webhook' is not correct, and that you are not > changing > > the version of your package (from 0.99.0 to 0.99.1, 0.99.2, ...) when you > > wish to generate another build report. @grimbough indicated in the github > > issue how to address these problems. > > > > Martin > > > > > > On 04/16/2018 03:58 AM, Pijush Das wrote: > > > >> Dear Ruqian, > >> > >> > >> Yes sir, I have opened the build report which is a link to an HTML page > >> with details. > >> But I unable to understand why the WARNING massages are showing. > >> > >> Three days before the other reviewers had made some comments and asked > me > >> to address > >> those issues and also told me to solve the NOTEs produced by BioCheck. > >> > >> Presently I am working on the sigFeature package to address those > issues. > >> I shall communicate soon after solving those issues. > >> > >> > >> Thank you > >> > >> > >> Regards > >> Pijush > >> > >> > >> > >> On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu < > >> ruqi...@student.unimelb.edu.au> > >> wrote: > >> > >> Hi Pijush, > >>> > >>> Did you open the build report which is a link to an HTML page with > >>> details > >>> of the warning? > >>> > >>> > >>> Regards, > >>> Ruqian > >>> > >>> > >>> > >>> On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das > wrote: > >>> > >>> Dear Sir, > >>>> > >>>> > >>>> I have submitted an R package named "sigFeature" in Github and also > >>>> Bioconductor 9 days before. > >>>> The reviewers only said that there is some WARNING problem in the > >>>> package > >>>> in different platform. > >>>> > >>>> But after that they are not communicating any thing regarding the > >>>> package. > >>>> I have checked the package > >>>> windows and Ubuntu it is working fine. > >>>> > >>>> I unable to understand what actually the problem is ? > >>>> And the reviewers are not communicating about the problem. Though I am > >>>> getting lots of email from bioc-devel dealing with others package > >>>> problem . > >>>> > >>>> Please suggest me what should I do now ? > >>>> > >>>> > >>>> > >>>> > >>>> Thank you > >>>> > >>>> > >>>> > >>>> Regards > >>>> Pijush > >>>> > >>>> > >>>> > >>>> > >>>> On Mon, Apr 2
Re: [Bioc-devel] Need some help to submit a R package.
We like to keep track of the changes and have the reviews in one place. If possible it would be better to replace the contents of existing git repository and do a version bump. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of Pijush Das Sent: Tuesday, April 24, 2018 7:43:04 AM To: Morgan, Martin Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] Need some help to submit a R package. Dear Sir, I have solved most of the issues raised by the reviewers. There were significant amount of changes in the original code. So should we submit our package (sigFeature) as a new submission or replace the contents of existing git repository with version increment. regards Pijush On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan < martin.mor...@roswellpark.org> wrote: > If you are still having problems understanding warnings, it is probably > better to use the github issue -- it may take some time to get an answer, > because the reviewers have many responsibilities. > > It looks like your 'webhook' is not correct, and that you are not changing > the version of your package (from 0.99.0 to 0.99.1, 0.99.2, ...) when you > wish to generate another build report. @grimbough indicated in the github > issue how to address these problems. > > Martin > > > On 04/16/2018 03:58 AM, Pijush Das wrote: > >> Dear Ruqian, >> >> >> Yes sir, I have opened the build report which is a link to an HTML page >> with details. >> But I unable to understand why the WARNING massages are showing. >> >> Three days before the other reviewers had made some comments and asked me >> to address >> those issues and also told me to solve the NOTEs produced by BioCheck. >> >> Presently I am working on the sigFeature package to address those issues. >> I shall communicate soon after solving those issues. >> >> >> Thank you >> >> >> Regards >> Pijush >> >> >> >> On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu < >> ruqi...@student.unimelb.edu.au> >> wrote: >> >> Hi Pijush, >>> >>> Did you open the build report which is a link to an HTML page with >>> details >>> of the warning? >>> >>> >>> Regards, >>> Ruqian >>> >>> >>> >>> On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das wrote: >>> >>> Dear Sir, >>>> >>>> >>>> I have submitted an R package named "sigFeature" in Github and also >>>> Bioconductor 9 days before. >>>> The reviewers only said that there is some WARNING problem in the >>>> package >>>> in different platform. >>>> >>>> But after that they are not communicating any thing regarding the >>>> package. >>>> I have checked the package >>>> windows and Ubuntu it is working fine. >>>> >>>> I unable to understand what actually the problem is ? >>>> And the reviewers are not communicating about the problem. Though I am >>>> getting lots of email from bioc-devel dealing with others package >>>> problem . >>>> >>>> Please suggest me what should I do now ? >>>> >>>> >>>> >>>> >>>> Thank you >>>> >>>> >>>> >>>> Regards >>>> Pijush >>>> >>>> >>>> >>>> >>>> On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh < >>>> nitesh.tur...@roswellpark.org> wrote: >>>> >>>> Hi, >>>>> >>>>> Please read through this documentation. >>>>> >>>>> http://bioconductor.org/developers/package-submission/ >>>>> >>>>> >>>>> Nitesh >>>>> >>>>> On Apr 2, 2018, at 2:00 AM, Pijush Das wrote: >>>>>> >>>>>> Dear Sir, >>>>>> >>>>>> >>>>>> >>>>>> I have developed an R package. I want to submit this package in >>>>>> Bioconductor. >>>>>> Please help me to submit the R package. >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> regards
Re: [Bioc-devel] Need some help to submit a R package.
Dear Sir, I have solved most of the issues raised by the reviewers. There were significant amount of changes in the original code. So should we submit our package (sigFeature) as a new submission or replace the contents of existing git repository with version increment. regards Pijush On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan < martin.mor...@roswellpark.org> wrote: > If you are still having problems understanding warnings, it is probably > better to use the github issue -- it may take some time to get an answer, > because the reviewers have many responsibilities. > > It looks like your 'webhook' is not correct, and that you are not changing > the version of your package (from 0.99.0 to 0.99.1, 0.99.2, ...) when you > wish to generate another build report. @grimbough indicated in the github > issue how to address these problems. > > Martin > > > On 04/16/2018 03:58 AM, Pijush Das wrote: > >> Dear Ruqian, >> >> >> Yes sir, I have opened the build report which is a link to an HTML page >> with details. >> But I unable to understand why the WARNING massages are showing. >> >> Three days before the other reviewers had made some comments and asked me >> to address >> those issues and also told me to solve the NOTEs produced by BioCheck. >> >> Presently I am working on the sigFeature package to address those issues. >> I shall communicate soon after solving those issues. >> >> >> Thank you >> >> >> Regards >> Pijush >> >> >> >> On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu < >> ruqi...@student.unimelb.edu.au> >> wrote: >> >> Hi Pijush, >>> >>> Did you open the build report which is a link to an HTML page with >>> details >>> of the warning? >>> >>> >>> Regards, >>> Ruqian >>> >>> >>> >>> On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das wrote: >>> >>> Dear Sir, I have submitted an R package named "sigFeature" in Github and also Bioconductor 9 days before. The reviewers only said that there is some WARNING problem in the package in different platform. But after that they are not communicating any thing regarding the package. I have checked the package windows and Ubuntu it is working fine. I unable to understand what actually the problem is ? And the reviewers are not communicating about the problem. Though I am getting lots of email from bioc-devel dealing with others package problem . Please suggest me what should I do now ? Thank you Regards Pijush On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh < nitesh.tur...@roswellpark.org> wrote: Hi, > > Please read through this documentation. > > http://bioconductor.org/developers/package-submission/ > > > Nitesh > > On Apr 2, 2018, at 2:00 AM, Pijush Das wrote: >> >> Dear Sir, >> >> >> >> I have developed an R package. I want to submit this package in >> Bioconductor. >> Please help me to submit the R package. >> >> >> >> >> >> >> >> >> >> regards >> Pijush Das >> >>[[alternative HTML version deleted]] >> >> ___ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> > > > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee > or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. > > [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel >>> >>> >> [[alternative HTML version deleted]] >> >> ___ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> >> > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. > [[alternative HTML version deleted]] ___ Bioc-devel@r-
Re: [Bioc-devel] Need some help to submit a R package.
If you are still having problems understanding warnings, it is probably
better to use the github issue -- it may take some time to get an
answer, because the reviewers have many responsibilities.
It looks like your 'webhook' is not correct, and that you are not
changing the version of your package (from 0.99.0 to 0.99.1, 0.99.2,
...) when you wish to generate another build report. @grimbough
indicated in the github issue how to address these problems.
Martin
On 04/16/2018 03:58 AM, Pijush Das wrote:
Dear Ruqian,
Yes sir, I have opened the build report which is a link to an HTML page
with details.
But I unable to understand why the WARNING massages are showing.
Three days before the other reviewers had made some comments and asked me
to address
those issues and also told me to solve the NOTEs produced by BioCheck.
Presently I am working on the sigFeature package to address those issues.
I shall communicate soon after solving those issues.
Thank you
Regards
Pijush
On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu
wrote:
Hi Pijush,
Did you open the build report which is a link to an HTML page with details
of the warning?
Regards,
Ruqian
On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das wrote:
Dear Sir,
I have submitted an R package named "sigFeature" in Github and also
Bioconductor 9 days before.
The reviewers only said that there is some WARNING problem in the package
in different platform.
But after that they are not communicating any thing regarding the package.
I have checked the package
windows and Ubuntu it is working fine.
I unable to understand what actually the problem is ?
And the reviewers are not communicating about the problem. Though I am
getting lots of email from bioc-devel dealing with others package
problem .
Please suggest me what should I do now ?
Thank you
Regards
Pijush
On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh <
nitesh.tur...@roswellpark.org> wrote:
Hi,
Please read through this documentation.
http://bioconductor.org/developers/package-submission/
Nitesh
On Apr 2, 2018, at 2:00 AM, Pijush Das wrote:
Dear Sir,
I have developed an R package. I want to submit this package in
Bioconductor.
Please help me to submit the R package.
regards
Pijush Das
[[alternative HTML version deleted]]
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or
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Re: [Bioc-devel] Need some help to submit a R package.
Dear Ruqian, Yes sir, I have opened the build report which is a link to an HTML page with details. But I unable to understand why the WARNING massages are showing. Three days before the other reviewers had made some comments and asked me to address those issues and also told me to solve the NOTEs produced by BioCheck. Presently I am working on the sigFeature package to address those issues. I shall communicate soon after solving those issues. Thank you Regards Pijush On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu wrote: > Hi Pijush, > > Did you open the build report which is a link to an HTML page with details > of the warning? > > > Regards, > Ruqian > > > > On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das wrote: > >> Dear Sir, >> >> >> I have submitted an R package named "sigFeature" in Github and also >> Bioconductor 9 days before. >> The reviewers only said that there is some WARNING problem in the package >> in different platform. >> >> But after that they are not communicating any thing regarding the package. >> I have checked the package >> windows and Ubuntu it is working fine. >> >> I unable to understand what actually the problem is ? >> And the reviewers are not communicating about the problem. Though I am >> getting lots of email from bioc-devel dealing with others package >> problem . >> >> Please suggest me what should I do now ? >> >> >> >> >> Thank you >> >> >> >> Regards >> Pijush >> >> >> >> >> On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh < >> nitesh.tur...@roswellpark.org> wrote: >> >> > Hi, >> > >> > Please read through this documentation. >> > >> > http://bioconductor.org/developers/package-submission/ >> > >> > >> > Nitesh >> > >> > > On Apr 2, 2018, at 2:00 AM, Pijush Das wrote: >> > > >> > > Dear Sir, >> > > >> > > >> > > >> > > I have developed an R package. I want to submit this package in >> > > Bioconductor. >> > > Please help me to submit the R package. >> > > >> > > >> > > >> > > >> > > >> > > >> > > >> > > >> > > >> > > regards >> > > Pijush Das >> > > >> > > [[alternative HTML version deleted]] >> > > >> > > ___ >> > > Bioc-devel@r-project.org mailing list >> > > https://stat.ethz.ch/mailman/listinfo/bioc-devel >> > >> > >> > >> > This email message may contain legally privileged and/or confidential >> > information. If you are not the intended recipient(s), or the employee >> or >> > agent responsible for the delivery of this message to the intended >> > recipient(s), you are hereby notified that any disclosure, copying, >> > distribution, or use of this email message is prohibited. If you have >> > received this message in error, please notify the sender immediately by >> > e-mail and delete this email message from your computer. Thank you. >> > >> >> [[alternative HTML version deleted]] >> >> ___ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> > > [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] Need some help to submit a R package.
Hi Pijush, Did you open the build report which is a link to an HTML page with details of the warning? Regards, Ruqian On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das wrote: > Dear Sir, > > > I have submitted an R package named "sigFeature" in Github and also > Bioconductor 9 days before. > The reviewers only said that there is some WARNING problem in the package > in different platform. > > But after that they are not communicating any thing regarding the package. > I have checked the package > windows and Ubuntu it is working fine. > > I unable to understand what actually the problem is ? > And the reviewers are not communicating about the problem. Though I am > getting lots of email from bioc-devel dealing with others package > problem . > > Please suggest me what should I do now ? > > > > > Thank you > > > > Regards > Pijush > > > > > On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh < > nitesh.tur...@roswellpark.org> wrote: > > > Hi, > > > > Please read through this documentation. > > > > http://bioconductor.org/developers/package-submission/ > > > > > > Nitesh > > > > > On Apr 2, 2018, at 2:00 AM, Pijush Das wrote: > > > > > > Dear Sir, > > > > > > > > > > > > I have developed an R package. I want to submit this package in > > > Bioconductor. > > > Please help me to submit the R package. > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > regards > > > Pijush Das > > > > > > [[alternative HTML version deleted]] > > > > > > ___ > > > Bioc-devel@r-project.org mailing list > > > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > > > > > > > This email message may contain legally privileged and/or confidential > > information. If you are not the intended recipient(s), or the employee > or > > agent responsible for the delivery of this message to the intended > > recipient(s), you are hereby notified that any disclosure, copying, > > distribution, or use of this email message is prohibited. If you have > > received this message in error, please notify the sender immediately by > > e-mail and delete this email message from your computer. Thank you. > > > > [[alternative HTML version deleted]] > > ___ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] Need some help to submit a R package.
Dear Sir, I have submitted an R package named "sigFeature" in Github and also Bioconductor 9 days before. The reviewers only said that there is some WARNING problem in the package in different platform. But after that they are not communicating any thing regarding the package. I have checked the package windows and Ubuntu it is working fine. I unable to understand what actually the problem is ? And the reviewers are not communicating about the problem. Though I am getting lots of email from bioc-devel dealing with others package problem . Please suggest me what should I do now ? Thank you Regards Pijush On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh < nitesh.tur...@roswellpark.org> wrote: > Hi, > > Please read through this documentation. > > http://bioconductor.org/developers/package-submission/ > > > Nitesh > > > On Apr 2, 2018, at 2:00 AM, Pijush Das wrote: > > > > Dear Sir, > > > > > > > > I have developed an R package. I want to submit this package in > > Bioconductor. > > Please help me to submit the R package. > > > > > > > > > > > > > > > > > > > > regards > > Pijush Das > > > > [[alternative HTML version deleted]] > > > > ___ > > Bioc-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. > [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] Need some help to submit a R package.
Hi, Please read through this documentation. http://bioconductor.org/developers/package-submission/ Nitesh > On Apr 2, 2018, at 2:00 AM, Pijush Das wrote: > > Dear Sir, > > > > I have developed an R package. I want to submit this package in > Bioconductor. > Please help me to submit the R package. > > > > > > > > > > regards > Pijush Das > > [[alternative HTML version deleted]] > > ___ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
[Bioc-devel] Need some help to submit a R package.
Dear Sir, I have developed an R package. I want to submit this package in Bioconductor. Please help me to submit the R package. regards Pijush Das [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
