Re: [BlueObelisk-discuss] Impact

2014-05-24 Thread Karol M. Langner
Hi Egon,

Great, i don't think you need to list all the pages. I just provided it for 
reference.

- Karol

On May 23 2014, Egon Willighagen wrote:
> Hi Karol, all,
> 
> On Thu, May 22, 2014 at 4:36 PM, Karol M. Langner
>  wrote:
> > You could also add cclib:
> > paper: http://dx.doi.org/10.1002/jcc.20823
> > repo: https://github.com/cclib/cclib
> 
> I added these two, but not the webpage... I have done that only for
> the main Blue Obelisk website, and Open SMILES because that does not
> other "publication"...
> 
> > docs: http://cclib.github.io/
> 
> Should it also list all project specific web (or documentation) pages?
> 
> Egon
> 
> 
> -- 
> E.L. Willighagen
> Department of Bioinformatics - BiGCaT
> Maastricht University (http://www.bigcat.unimaas.nl/)
> Homepage: http://egonw.github.com/
> LinkedIn: http://se.linkedin.com/in/egonw
> Blog: http://chem-bla-ics.blogspot.com/
> PubList: http://www.citeulike.org/user/egonw/tag/papers
> ORCID: -0001-7542-0286

-- 
written by Karol M. Langner
Sat May 24 14:01:19 EDT 2014

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Re: [BlueObelisk-discuss] Impact

2014-05-23 Thread Egon Willighagen
Hi Karol, all,

On Thu, May 22, 2014 at 4:36 PM, Karol M. Langner
 wrote:
> You could also add cclib:
> paper: http://dx.doi.org/10.1002/jcc.20823
> repo: https://github.com/cclib/cclib

I added these two, but not the webpage... I have done that only for
the main Blue Obelisk website, and Open SMILES because that does not
other "publication"...

> docs: http://cclib.github.io/

Should it also list all project specific web (or documentation) pages?

Egon


-- 
E.L. Willighagen
Department of Bioinformatics - BiGCaT
Maastricht University (http://www.bigcat.unimaas.nl/)
Homepage: http://egonw.github.com/
LinkedIn: http://se.linkedin.com/in/egonw
Blog: http://chem-bla-ics.blogspot.com/
PubList: http://www.citeulike.org/user/egonw/tag/papers
ORCID: -0001-7542-0286

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Re: [BlueObelisk-discuss] Impact

2014-05-22 Thread Karol M. Langner
Hi Egon,

You could also add cclib:
paper: http://dx.doi.org/10.1002/jcc.20823
repo: https://github.com/cclib/cclib
docs: http://cclib.github.io/

Cheers,
Karol

On May 14 2014, Egon Willighagen wrote:
> Hi all,
> 
> some weeks ago I started making an ImpactStory profile for the Blue
> Obelisk. May service as back pocket material if you promote the Blue
> Obelisk. It's hard to say we do not have impact, and I think we
> succeeded in making a change.
> 
> I have followed Figure 4 from the second Blue Obelisk paper, and
> listed papers and software hosted on GitHub (no SourceForge support at
> this moment):
> 
> https://impactstory.org/BlueObelisk
> 
> If you find your project missing (likely), please send me the DOI or
> GitHub URL (please only for top level projects, so I list only
> bioclipse.core).
> 
> The ImpactStory page doesn't feature an logo/icon, and this may be a
> good moment to standardize on one, and put that on our project front
> pages (something that keeps coming up now and then but something we
> never all did...)
> 
> Egon
> 
> -- 
> E.L. Willighagen
> Department of Bioinformatics - BiGCaT
> Maastricht University (http://www.bigcat.unimaas.nl/)
> Homepage: http://egonw.github.com/
> LinkedIn: http://se.linkedin.com/in/egonw
> Blog: http://chem-bla-ics.blogspot.com/
> PubList: http://www.citeulike.org/user/egonw/tag/papers
> ORCID: -0001-7542-0286
> 
> --
> "Accelerate Dev Cycles with Automated Cross-Browser Testing - For FREE
> Instantly run your Selenium tests across 300+ browser/OS combos.
> Get unparalleled scalability from the best Selenium testing platform available
> Simple to use. Nothing to install. Get started now for free."
> http://p.sf.net/sfu/SauceLabs
> ___
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written by Karol M. Langner
Thu May 22 10:34:33 EDT 2014

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Re: [BlueObelisk-discuss] Impact

2014-05-14 Thread Egon Willighagen
On Wed, May 14, 2014 at 3:43 PM, Craig James  wrote:
> www.opensmiles.org

Yes, checked and website can indeed be listed. Added!

Egon

-- 
E.L. Willighagen
Department of Bioinformatics - BiGCaT
Maastricht University (http://www.bigcat.unimaas.nl/)
Homepage: http://egonw.github.com/
LinkedIn: http://se.linkedin.com/in/egonw
Blog: http://chem-bla-ics.blogspot.com/
PubList: http://www.citeulike.org/user/egonw/tag/papers
ORCID: -0001-7542-0286

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Re: [BlueObelisk-discuss] Impact

2014-05-14 Thread Craig James
I don't know if a web site qualifies as a paper...

www.opensmiles.org

Craig


On Wed, May 14, 2014 at 3:13 AM, Egon Willighagen <
egon.willigha...@gmail.com> wrote:

> Hi all,
>
> some weeks ago I started making an ImpactStory profile for the Blue
> Obelisk. May service as back pocket material if you promote the Blue
> Obelisk. It's hard to say we do not have impact, and I think we
> succeeded in making a change.
>
> I have followed Figure 4 from the second Blue Obelisk paper, and
> listed papers and software hosted on GitHub (no SourceForge support at
> this moment):
>
> https://impactstory.org/BlueObelisk
>
> If you find your project missing (likely), please send me the DOI or
> GitHub URL (please only for top level projects, so I list only
> bioclipse.core).
>
> The ImpactStory page doesn't feature an logo/icon, and this may be a
> good moment to standardize on one, and put that on our project front
> pages (something that keeps coming up now and then but something we
> never all did...)
>
> Egon
>
> --
> E.L. Willighagen
> Department of Bioinformatics - BiGCaT
> Maastricht University (http://www.bigcat.unimaas.nl/)
> Homepage: http://egonw.github.com/
> LinkedIn: http://se.linkedin.com/in/egonw
> Blog: http://chem-bla-ics.blogspot.com/
> PubList: http://www.citeulike.org/user/egonw/tag/papers
> ORCID: -0001-7542-0286
>
>
> --
> "Accelerate Dev Cycles with Automated Cross-Browser Testing - For FREE
> Instantly run your Selenium tests across 300+ browser/OS combos.
> Get unparalleled scalability from the best Selenium testing platform
> available
> Simple to use. Nothing to install. Get started now for free."
> http://p.sf.net/sfu/SauceLabs
> ___
> Blueobelisk-discuss mailing list
> Blueobelisk-discuss@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/blueobelisk-discuss
>



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-
Craig A. James
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eMolecules, Inc.
-
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Re: [BlueObelisk-discuss] Impact

2014-05-14 Thread Egon Willighagen
On Wed, May 14, 2014 at 1:29 PM, Peter Murray-Rust  wrote:
> I am giving a keynote on Open Data at the Hinxton Genome Campus tomorrow and
> will highlight this.

Ah, that reminds me I still had to upload BODR 10 to FigShare... now done:

http://figshare.com/articles/Blue_Obelisk_Data_Repository_10/1025775

Egon

-- 
E.L. Willighagen
Department of Bioinformatics - BiGCaT
Maastricht University (http://www.bigcat.unimaas.nl/)
Homepage: http://egonw.github.com/
LinkedIn: http://se.linkedin.com/in/egonw
Blog: http://chem-bla-ics.blogspot.com/
PubList: http://www.citeulike.org/user/egonw/tag/papers
ORCID: -0001-7542-0286

--
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Re: [BlueObelisk-discuss] Impact

2014-05-14 Thread Peter Murray-Rust
Thanks Egon,

I am giving a keynote on Open Data at the Hinxton Genome Campus tomorrow
and will highlight this.


On Wed, May 14, 2014 at 11:13 AM, Egon Willighagen <
egon.willigha...@gmail.com> wrote:

> Hi all,
>
> some weeks ago I started making an ImpactStory profile for the Blue
> Obelisk. May service as back pocket material if you promote the Blue
> Obelisk. It's hard to say we do not have impact, and I think we
> succeeded in making a change.
>
> I have followed Figure 4 from the second Blue Obelisk paper, and
> listed papers and software hosted on GitHub (no SourceForge support at
> this moment):
>
> https://impactstory.org/BlueObelisk
>
> If you find your project missing (likely), please send me the DOI or
> GitHub URL (please only for top level projects, so I list only
> bioclipse.core).
>
> The ImpactStory page doesn't feature an logo/icon, and this may be a
> good moment to standardize on one, and put that on our project front
> pages (something that keeps coming up now and then but something we
> never all did...)
>
> Egon
>
> --
> E.L. Willighagen
> Department of Bioinformatics - BiGCaT
> Maastricht University (http://www.bigcat.unimaas.nl/)
> Homepage: http://egonw.github.com/
> LinkedIn: http://se.linkedin.com/in/egonw
> Blog: http://chem-bla-ics.blogspot.com/
> PubList: http://www.citeulike.org/user/egonw/tag/papers
> ORCID: -0001-7542-0286
>
>
> --
> "Accelerate Dev Cycles with Automated Cross-Browser Testing - For FREE
> Instantly run your Selenium tests across 300+ browser/OS combos.
> Get unparalleled scalability from the best Selenium testing platform
> available
> Simple to use. Nothing to install. Get started now for free."
> http://p.sf.net/sfu/SauceLabs
> ___
> Blueobelisk-discuss mailing list
> Blueobelisk-discuss@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/blueobelisk-discuss
>



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Unilever Centre, Dep. Of Chemistry
University of Cambridge
CB2 1EW, UK
+44-1223-763069
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Re: [BlueObelisk-discuss] Impact

2014-05-14 Thread Egon Willighagen
On Wed, May 14, 2014 at 12:26 PM, Rzepa, Henry S  wrote:
> I wonder how that might be useful for collaborative applications such as eg  
> CDK, JSmol and the like?  Would all the contributor’s ORCIDs bee needed?

Interesting idea! Passed along to @ImpactStory:
https://twitter.com/egonwillighagen/status/466525714376712192

Egon


-- 
E.L. Willighagen
Department of Bioinformatics - BiGCaT
Maastricht University (http://www.bigcat.unimaas.nl/)
Homepage: http://egonw.github.com/
LinkedIn: http://se.linkedin.com/in/egonw
Blog: http://chem-bla-ics.blogspot.com/
PubList: http://www.citeulike.org/user/egonw/tag/papers
ORCID: -0001-7542-0286

--
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Re: [BlueObelisk-discuss] Impact

2014-05-14 Thread Rzepa, Henry S
I had not imagined that  Impact story would apply to groups as well as 
individuals, but it makes great sense.

ImpactStory also operates against an individual’s  ORCiD identifier, and  I am 
not aware that a group can also acquire a  ORCiD? 

Also, we  have been using the  ORCID public  API to authenticate ORCID 
identifies into applications  (such as eg an  ELN or a digital repository), so 
that the trust is firm and complete. I wonder how that might be useful for 
collaborative applications such as eg  CDK, JSmol and the like?  Would all the 
contributor’s ORCIDs bee needed?

On 14 May 2014, at 11:13, Egon Willighagen  wrote:

> Hi all,
> 
> some weeks ago I started making an ImpactStory profile for the Blue
> Obelisk. May service as back pocket material if you promote the Blue
> Obelisk. It's hard to say we do not have impact, and I think we
> succeeded in making a change.
> 
> I have followed Figure 4 from the second Blue Obelisk paper, and
> listed papers and software hosted on GitHub (no SourceForge support at
> this moment):
> 
> https://impactstory.org/BlueObelisk
> 
> If you find your project missing (likely), please send me the DOI or
> GitHub URL (please only for top level projects, so I list only
> bioclipse.core).
> 
> The ImpactStory page doesn't feature an logo/icon, and this may be a
> good moment to standardize on one, and put that on our project front
> pages (something that keeps coming up now and then but something we
> never all did…)
> 



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[BlueObelisk-discuss] Impact

2014-05-14 Thread Egon Willighagen
Hi all,

some weeks ago I started making an ImpactStory profile for the Blue
Obelisk. May service as back pocket material if you promote the Blue
Obelisk. It's hard to say we do not have impact, and I think we
succeeded in making a change.

I have followed Figure 4 from the second Blue Obelisk paper, and
listed papers and software hosted on GitHub (no SourceForge support at
this moment):

https://impactstory.org/BlueObelisk

If you find your project missing (likely), please send me the DOI or
GitHub URL (please only for top level projects, so I list only
bioclipse.core).

The ImpactStory page doesn't feature an logo/icon, and this may be a
good moment to standardize on one, and put that on our project front
pages (something that keeps coming up now and then but something we
never all did...)

Egon

-- 
E.L. Willighagen
Department of Bioinformatics - BiGCaT
Maastricht University (http://www.bigcat.unimaas.nl/)
Homepage: http://egonw.github.com/
LinkedIn: http://se.linkedin.com/in/egonw
Blog: http://chem-bla-ics.blogspot.com/
PubList: http://www.citeulike.org/user/egonw/tag/papers
ORCID: -0001-7542-0286

--
"Accelerate Dev Cycles with Automated Cross-Browser Testing - For FREE
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