Re: [CF-metadata] standard names and area type for ice sheet surface mass balance

2011-07-26 Thread alison.pamment
Dear Jonathan,

Back in February you proposed three new names for ice sheet mass balance:

 
 surface_snow_and_ice_melt_flux (kg m-2 s-1): the mass flux of melting
 at the
 surface
 
 surface_snow_and_ice_refreezing_flux (kg m-2 s-1): the mass flux of
 surface
 meltwater which refreezes within the snow or firn
 
 land_ice_surface_specific_mass_balance_flux (kg m-2 s-1): the net rate
 of
 gain (if positive) or loss (if negative) of frozen water mass per unit
 area
 due to all processes of surface accumulation and ablation
 
 I would also like to propose a new area_type of ice_free_land.
 

No comments were received on any of these names.  The first two are fine and I 
have included them in the table update today.

When entering the third name into the vocabulary editor I noticed that it is 
very similar to an existing name land_ice_surface_specific_mass_balance (m 
s-1). The definition of the existing name says Specific mass balance means the 
net rate at which ice is added per unit area at the land ice surface which 
also sounds very similar to the definition of your proposed name. However, the 
units of m s-1 make me think this name perhaps refers to the thickness of ice 
being deposited/ablated per unit time so should it really refer to mass 
balance? Your proposed name has units of kg m-2 s-1 which seems correct for a 
mass flux. Please can you confirm that the two quantities are distinct? Do you 
think we need to modify the existing name?

I agree that it is fine to introduce a new area_type of ice_free_land.

Best wishes,
Alison
-- 
Scanned by iCritical.
___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata


Re: [CF-metadata] CF feature type trajectory (Ch. 9; May 10, 2011) and axis, attribute

2011-07-26 Thread John Caron

Hi Chris:

I think we agreed that this sentence in section 5 should be removed:

The|axis|attribute is not allowed for auxiliary coordinate variables.

If anyone has a better idea, let me know. otherwise i will submit a 
defect change.


John

On 7/20/2011 7:51 AM, Chris Paver wrote:

Dear list,

Was there any resolution to the issue I brought up?

Thanks,
Chris

 Original Message 
Date: Thu, 07 Jul 2011 11:59:09 -0700
From: Steve Hankin steven.c.han...@noaa.gov
Subject: Re: [CF-metadata] CF feature type trajectory (Ch. 9; May 10,
2011) and axis attribute
To: Jeffrey F. Painter paint...@llnl.gov
Cc: cf-metadata@cgd.ucar.edu
Message-ID: 4e1601fd.5020...@noaa.gov
Content-Type: text/plain; charset=ISO-8859-1; format=flowed



On 7/7/2011 11:53 AM, Jeffrey F. Painter wrote:
  It looks as though you've been reviewing the public draft of the
  future CF Conventions version 1.6.  It's great that someone has been
  looking at it!
 
  It seems to me that z in the examples of Appendix H (formerly
  designated A9) plays the role of an auxiliary coordinate variable,
  although technically it's not because there isn't (but should be) a
  'coordinates' attribute which lists auxiliary coordinate variables.
  I don't know why axes are banned for auxiliary coordinate 
variables in

  the case of trajectories.  Something needs to be clarified here, or
  the examples changed.
 
  This was ticket 37.  Are there any comments from Steve Hankin, the
  moderator, or any of the other people who contributed to writing
  Chapter 9, or anyone else who knows more than me?
stand by.   I think Chris has pointed out a needed correction to Chapter
5 that was discussed, but was not documented.  (thanks Chris)   But need
to confirm with others.

 - Steve



 
  Thanks to all!
  - Jeff Painter
 
  On 7/7/11 5:13 AM, Chris Paver wrote:
  Dear List,
  I have been reviewing the use of the axis attribute as defined in
  Chapter 5, and
  comparing it to the trajectory example in the Chapter 9 document at
  A9.4.  The
  Ch. 5 rules states that only a coordinate variable can have an axis
  attribute,
  whereas the auxiliary variables cannot.  However, in Ch. 9, the 
single

  trajectory dimension is time, but the variable z contains the axis
  attribute. Is
  this a change to the rule as stated in Ch. 5, or a typo?  I briefly
  looked over
  the other feature types in Ch. 9, and they all look to have the 
vertical

  variable listed with the axis attribute, so maybe it is a typo.
 
  Thanks,
  Chris



___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata


Re: [CF-metadata] new TEOS-10 standard names

2011-07-26 Thread Jonathan Gregory
Dear all

I agree with Roy in his remark that the existing salinity Standard Name is a
much broader term than the TEOS-10 recommendations.
In some datasets, it may not be well-defined precisely which kind of salinity
we have. This is particularly the case for model datasets, since most ocean
models used for climate are not capable of distinguishing owing to the
approximations they make. (I note that CF and the standard name table began
as a convention for GCMs, and later expanded to accommodate observations.) We
cannot redefine the existing standard name because of the existing datasets and
because it is useful to have a generic name anyway.

However it is fine both to keep this existing generic name and to define some 
new ones to make the distinction in new obs and model datasets where it is
appropriate, as proposed by Paul and Trevor. It is usual in CF to have a choice
of precision for different applications.

On Paul's proposals, I have a couple of comments:

sea_water_preformed_salinity
Definition: Preformed Salinity is a salinity variable that is designed to be as
conservative as possible, by removing the estimated biogeochemical influences
on the seawater composition from other forms of salinity.

I assume this is a newly introduced term. I would say that it would be good
to be more informative. Preformed does not tell me what it is - it doesn't
suggest anything in particular to me as a non-expert. CF standard names do not
have to be the term in common use if we could be more self-explanatory.
Perhaps we could be more self-explanatory in this term with a phrase such as
assuming_no_biogeochemical_influence. But actually, I am unsure what that
means - could you explain a bit further? How can salinity not be influenced
by geochemistry, in particular? Please excuse my ignorance.

sea_water_potential_enthalpy
Since this quantity is in J kg-1, I suggest that it should contain the word
specific. Omitting this might imply that it was an extensive quantity e.g.
an ocean integral. By analogy with the existing standard name
  specific_kinetic_energy_of_sea_water
it might be best phrased as
  specific_potential_enthalpy_of_sea_water
The salinity quantities are by definition intensive and so specific is
not required.

Best wishes

Jonathan
___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata


Re: [CF-metadata] COARDS - positive attribute

2011-07-26 Thread Jonathan Gregory
Dear Glenn

The positive attribute hasn't been extended to data variables in CF because
the standard name always implies the sign convention e.g.
  toa_net_downward_longwave_flux
  toa_net_upward_shortwave_flux
The advantage of doing it is this way is that it is impossible for the sign
convention to be missing if the quantity is identified by standard name! I am
not clear about the details of your case, but I guess that it should be
possible to use a standard name which states what the sign convention is for
the thickness of the water column.

Best wishes

Jonathan
___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata


Re: [CF-metadata] CF feature type trajectory (Ch. 9; May 10, 2011) and axis, attribute

2011-07-26 Thread Jonathan Gregory
Dear Chris, Jeff, Steve, John

   It seems to me that z in the examples of Appendix H (formerly
   designated A9) plays the role of an auxiliary coordinate variable,
   although technically it's not because there isn't (but should be) a
   'coordinates' attribute which lists auxiliary coordinate variables.
   I don't know why axes are banned for auxiliary coordinate variables in
   the case of trajectories.  Something needs to be clarified here, or
   the examples changed.
  
   This was ticket 37.  Are there any comments from Steve Hankin, the
   moderator, or any of the other people who contributed to writing
   Chapter 9, or anyone else who knows more than me?
 stand by.   I think Chris has pointed out a needed correction to Chapter
 5 that was discussed, but was not documented.  (thanks Chris)   But need
 to confirm with others.

Ticket 62 discusses the proposed change to allow auxiliary coordinate
variables to have the axis attribute. This ticket was originally proposed by
Karl to correct a defect, and I think when we were writing chapter 9 we had
in mind this change. I propose that ticket 62 should be implemented in CF 1.6
(it wasn't one of the tickets I had listed earlier to Jeff - I must have
overlooked it).  In that ticket, I proposed some wording, to which no-one
subsequently objected, and that was many months ago.

Also, Jeff, if there are any examples in App H where a data variables does
not list its aux coord vars in a coordinates attribute, please could you
correct them? This is required, as you say. It says in 9.5, The coordinates
attribute must be attached to every data variable to indicate the
spatiotemporal coordinate variables that are needed to geo-locate the data.

Best wishes and thanks

Jonathan
___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata


Re: [CF-metadata] the need to store lat/lon coordinates in a CF metadata compliant netCDF file

2011-07-26 Thread Jonathan Gregory
Dear all

For datasets which are intended for analysis by end-users I think it would be
undesirable to remove the requirement of providing explicit lat and lon
coords even if a grid_mapping is provided. I think it is unrealistic to expect
all software which someone might use to analyse netCDF files to be able to
recognise and act upon all possible values of the CF grid_mapping attribute,
and without the lat and lon information the user would have a problem. If the
issue is storage space in the file I think the much better choice is to store
the explicit coordinates in another file, by extending the CF convention to
allow datasets to be distributed over several linked files, as gridspec does
for example.

Steve appears to suggest that grid_mapping is required in some circumstances,
but I don't think it is at present. However, the text Steve quotes may not be
quite right:

   /When the coordinate variables for a horizontal grid are not
   longitude and latitude,*_it is required that the true latitude and
   longitude coordinates be supplied_* via the coordinates attribute/.

The text should make it clear that this requirement applies when the data has a
geolocated horizontal grid. It doesn't necessarily apply to idealised cases.
We could clarify this with a defect ticket.

Without the grid_mapping, the lat and lon still make sense in the common case
(and original CF case) of GCM data, and in many other cases, the intended
usage of the data does not require precision about the figure of the Earth.
Although this metadata could be valuable if it can be defined, I think it would
be too onerous to require it.

CF is primarily intended to promote the processing and sharing of netCDF
files, it says in the Abstract. As John notes, it could be used for other
purposes, such as internal files in models. Do they have to be CF-compliant,
however, if they're not intended for analysis or for sharing?

Cheers

Jonathan
___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata


Re: [CF-metadata] More background on the burned area

2011-07-26 Thread Jonathan Gregory
Dear Kevin

burned_area and burned_area_fraction would be OK as standard names, I think,
but I would tend to agree with your suggestion that vegetation could also be
mentioned somehow, in order to make the standard_name more self-explanatory
when in the context of a dataset that might contain many other geophysical
quantities.

Best wishes

Jonathan
___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata


Re: [CF-metadata] Units: degrees - COARDS/CF Convention

2011-07-26 Thread Jonathan Gregory
Dear Glenn

I too agree with your interpretation. COARDS and CF disallow degree for lat
and lon, but degree is allowed for some other quantities in the standard name
table e.g. grid_latitude and grid_longitude (for a rotated-pole system) have
units of degree.

I agree with Roy that quantities which are distinguished by according to
either magnetic or true bearing should have that distinction indicated in CF
by semantics i.e. standard_name, not by units.

Best wishes

Jonathan
___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata


Re: [CF-metadata] new TEOS-10 standard names:- reply to two emails.

2011-07-26 Thread Lowry, Roy K.
Hi Trevor,

As one who has worked in a data centre for a long time I can tell you that the 
transition to Practical Salinity was nowhere near as clean as you imply.  The 
1978 Equations of State weren't published by UNESCO until 1982 or 1983 and it 
took some people a long while to latch on (I remember locating at least one bit 
of code in use in the 90s that hadn't been updated). There was also uncertainty 
resulting from the lack of information on the algorithms built into the STD 
systems of the 70s that were still in use well into the 80s.

Hopefully, the transition to TEOS-10 will be much cleaner.

Thanks for correcting my misunderstanding that models couldn't generate 
Practical Salinity. However, I still feel that aliasing the current salinity 
standard names to practical salinity is a little too risky.

Cheers, Roy.

-Original Message-
From: cf-metadata-boun...@cgd.ucar.edu 
[mailto:cf-metadata-boun...@cgd.ucar.edu] On Behalf Of trevor.mcdoug...@csiro.au
Sent: 22 July 2011 03:05
To: trevor.mcdoug...@csiro.au; ngalbra...@whoi.edu; CF-metadata@cgd.ucar.edu; 
paul.dur...@csiro.au; paul.bar...@csiro.au; rainer.feis...@io-warnemuende.de; 
r...@eos.ubc.ca; King, Brian A.; stephen.griff...@noaa.gov
Subject: Re: [CF-metadata] new TEOS-10 standard names:- reply to two emails.

Two replies follow, first to Karl Taylor, then to Roy Lowrie.

Hello Karl,

(1) potential temperature is what it always was, namely the temperature 
of a seawater parcel after an adiabatic and isohaline change of pressure to p = 
0 dbar.

(2) Conservative Temperature is proportional to potential enthalpy which 
is the enthalpy of a seawater parcel after the same adiabatic and isohaline 
change of pressure to p = 0 dbar.  Conservative temperature is a more accurate 
measure of the heat content of seawater, by a factor of one hundred, than is 
potential temperature.  See the figure on page 10 of Getting _Started.. to 
see how different Conservative Temperature is to potential temperature.

(3) in situ temperature is a pretty useless variable.  It corresponds to 
electrical conductivity in that both are measured variables, but we quickly 
move on from these measured variables to calculate variables that have the 
potential property, and that are as conservative as possible.

   It is, and always has been, a little dangerous (although not illegal) to use 
the word temperature if in-situ temperature t is intended.  Rather it is best 
described as in-situ temperature.

   I refer you to the brochure Getting Started with TEOS-10 and the Gibbs 
SeaWater Oceanographic Toolbox (nicknamed TEOS-10 for dummies) where the new 
variables, Absolute Salinity and Conservative Temperature are explained, as is 
the way in which TEOS-10 should be included in ocean models.  This document can 
be found here
http://www.teos-10.org/pubs/Getting_Started.pdf

   TEOS-10 allows the calculation of heaps of thermodynamic properties of 
seawater, ice and humid air; properties that we never had beforehand (the 
mathematical beauty and self-consistency of having three Gibbs functions allows 
this, namely Gibbs functions for seawater, for ice and for humid air).  For 
example we now have entropy, enthalpy, internal energy, latent heat of melting, 
latent heat of evaporation, all precisely defined and we have algorithms that 
are really accurate and that are 100% consistent with each other.  But the 
things that are important for oceanographers are Absolute Salinity and 
Conservative Temperature.  These variables are the axes for our T-S diagrams 
now.  As far as the practicing ocean modeller and climate scientist is 
concerned, once Absolute Salinity and Conservative Temperature are adopted, all 
of the other beautiful thermodynamic machinery that underlies TEOS-10 does not 
need to be learnt; it is there as a supporting thermodynamic framework.

_

Now I am replying to an email from Roy Lowrie.

Roy, First, thanks for drawing attention to the following, Finally, can I 
draw peoples' attention to the statement on the TEOS-10 Web Site that data 
centres should continue to ingest and store salinity observations as Practical 
Salinity.  It is abundantly clear from a number of conversations I have had 
recently that this is being overlooked.

This is perhaps the MOST IMPORTANT point for people to grasp, especially 
data centres!  This is one thing we cannot afford to get wrong; observational 
data must be stored as Practical Salinity.


Then you make the point that the existing data bases contain at least two 
different types of salinity.  There is the Knudsen salinity (ppt) which is 
calculated from

S_K  = 0.03  +  1.805 Cl

and I think I am correct in saying that any salinity data in national data 
centres with dates between 1901 and 1977 will be this Knudsen salinity.  Then 
after 1978, the salinity in national data bases should be Practical Salinity 
S_P (sometimes called PSAL).  The 

Re: [CF-metadata] new TEOS-10 standard names

2011-07-26 Thread Jonathan Gregory
Dear all

I understand the need to be clear, with new standard names, which observational
quantity is being collected in future. I do not agree, however, that we should
make the plain salinity name an alias for something more precise. This is
partly because that might change the meaning of existing data, possibly
incorrectly as Trevor points out. Partly it is also because I think it is
quite possible that models, perhaps idealised, may be used in which it would
not be meaningful to be more precise than just salinity.

Trevor argues that existing ocean models use practical salinity because (a)
they are initialised with observations of that and (b) they assume so in their
equation of state. I don't think (a) is necessarily so. In some cases, they
might not be initialised with observations, for instance in idealised
investigations of spin-up. Even when initialised from obs,
they will almost certainly drift to a less realistic state. I don't know enough
about it to be sure about (b). Unless we could be certain this is always the
case, I think plain salinity should be retained for possible use in models.
However, we could certainly recommend that models should use one of the new
more precise terms if definitely appropriate. This recommendation could be
included in the standard_name definition of plain salinity.

I understand the existing standard name sea_water_temperature to mean in-situ
temperature, as it does for air temperature. This could be stated in the
definition.

The purpose of standard names themselves is not to prescribe or recommend what
quantities people should store in netCDF files. It is to allow them to describe
with sufficient precision the quantities they have chosen to store, in order
to make it possible to decide which quantities from different datasets should
be regarded as comparable.

Standard names are all in lower case, regardless of what case is used in
ordinary writing. This is for simplicity in matching strings. Case-sensitive
matching would inevitably trip people up and cause a nuisance when they got
it wrong.

Best wishes

Jonathan
___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata


Re: [CF-metadata] standard names and area type for ice sheet surface mass balance

2011-07-26 Thread Jonathan Gregory
Dear Alison

Re: land_ice_surface_specific_mass_balance_flux (kg m-2 s-1)

When entering the third name into the vocabulary editor I noticed that it is
very similar to an existing name land_ice_surface_specific_mass_balance (m
s-1). The definition of the existing name says Specific mass balance means
the net rate at which ice is added per unit area at the land ice surface
which also sounds very similar to the definition of your proposed
name. However, the units of m s-1 make me think this name perhaps refers to
the thickness of ice being deposited/ablated per unit time so should it really
refer to mass balance? Your proposed name has units of kg m-2 s-1 which
seems correct for a mass flux. Please can you confirm that the two quantities
are distinct? Do you think we need to modify the existing name?

Thanks for noticing this. It shows the value of the vocab editor! Yes, I
propose that the existing name in m s-1 should be changed to
  land_ice_surface_specific_mass_balance_rate
and the same for
  land_ice_lwe_surface_specific_mass_balance_rate
The use of rate is consistent with other names in m s-1 such as
  land_ice_lwe_basal_melt_rate
and will distinguish them from flux names.

Thanks for making the other changes.

Best wishes

Jonathan
___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata


Re: [CF-metadata] CF feature type trajectory (Ch. 9; May 10, 2011) and axis, attribute

2011-07-26 Thread Chris Paver

Hey John,
Thanks for the info.  Jonathan Gregory stated that this fix would roll out with 
CF-1.6; is that still correct?


What will the Chapter 9 examples look like then?  Will any requirements based on 
feature types be addressed for the axis attribute?


Thanks,
Chris

On 07/25/2011 12:51 PM, John Caron wrote:

Hi Chris:

I think we agreed that this sentence in section 5 should be removed:

The|axis|attribute is not allowed for auxiliary coordinate variables.

If anyone has a better idea, let me know. otherwise i will submit a defect 
change.

John

On 7/20/2011 7:51 AM, Chris Paver wrote:

Dear list,

Was there any resolution to the issue I brought up?

Thanks,
Chris

 Original Message 
Date: Thu, 07 Jul 2011 11:59:09 -0700
From: Steve Hankin steven.c.han...@noaa.gov
Subject: Re: [CF-metadata] CF feature type trajectory (Ch. 9; May 10,
2011) and axis attribute
To: Jeffrey F. Painter paint...@llnl.gov
Cc: cf-metadata@cgd.ucar.edu
Message-ID: 4e1601fd.5020...@noaa.gov
Content-Type: text/plain; charset=ISO-8859-1; format=flowed



On 7/7/2011 11:53 AM, Jeffrey F. Painter wrote:
  It looks as though you've been reviewing the public draft of the
  future CF Conventions version 1.6. It's great that someone has been
  looking at it!
 
  It seems to me that z in the examples of Appendix H (formerly
  designated A9) plays the role of an auxiliary coordinate variable,
  although technically it's not because there isn't (but should be) a
  'coordinates' attribute which lists auxiliary coordinate variables.
  I don't know why axes are banned for auxiliary coordinate variables in
  the case of trajectories. Something needs to be clarified here, or
  the examples changed.
 
  This was ticket 37. Are there any comments from Steve Hankin, the
  moderator, or any of the other people who contributed to writing
  Chapter 9, or anyone else who knows more than me?
stand by. I think Chris has pointed out a needed correction to Chapter
5 that was discussed, but was not documented. (thanks Chris) But need
to confirm with others.

- Steve



 
  Thanks to all!
  - Jeff Painter
 
  On 7/7/11 5:13 AM, Chris Paver wrote:
  Dear List,
  I have been reviewing the use of the axis attribute as defined in
  Chapter 5, and
  comparing it to the trajectory example in the Chapter 9 document at
  A9.4. The
  Ch. 5 rules states that only a coordinate variable can have an axis
  attribute,
  whereas the auxiliary variables cannot. However, in Ch. 9, the single
  trajectory dimension is time, but the variable z contains the axis
  attribute. Is
  this a change to the rule as stated in Ch. 5, or a typo? I briefly
  looked over
  the other feature types in Ch. 9, and they all look to have the vertical
  variable listed with the axis attribute, so maybe it is a typo.
 
  Thanks,
  Chris





___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata


--
Chris Paver, Oceanographer
NOAA/NODC E/OC1
1315 East-West Hwy
Silver Spring MD 20910
Phone:  301-713-3272 ext. 118
Fax:  301-713-3302
http://www.nodc.noaa.gov/
___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata


Re: [CF-metadata] CF feature type trajectory (Ch. 9; May 10, 2011) and axis, attribute

2011-07-26 Thread Jeffrey F. Painter

I'll include Ticket 62 with CF-1.6.
The Chapter 9 examples are Appendix H, now available in the public draft 
of CF 1.6.  At the moment I don't remember what's in them!


- Jeff

On 7/26/11 2:13 PM, Chris Paver wrote:

Hey John,
Thanks for the info.  Jonathan Gregory stated that this fix would roll out with
CF-1.6; is that still correct?

What will the Chapter 9 examples look like then?  Will any requirements based on
feature types be addressed for the axis attribute?

Thanks,
Chris

On 07/25/2011 12:51 PM, John Caron wrote:

Hi Chris:

I think we agreed that this sentence in section 5 should be removed:

The|axis|attribute is not allowed for auxiliary coordinate variables.

If anyone has a better idea, let me know. otherwise i will submit a defect 
change.

John

On 7/20/2011 7:51 AM, Chris Paver wrote:

Dear list,

Was there any resolution to the issue I brought up?

Thanks,
Chris

 Original Message 
Date: Thu, 07 Jul 2011 11:59:09 -0700
From: Steve Hankinsteven.c.han...@noaa.gov
Subject: Re: [CF-metadata] CF feature type trajectory (Ch. 9; May 10,
2011) and axis attribute
To: Jeffrey F. Painterpaint...@llnl.gov
Cc: cf-metadata@cgd.ucar.edu
Message-ID:4e1601fd.5020...@noaa.gov
Content-Type: text/plain; charset=ISO-8859-1; format=flowed



On 7/7/2011 11:53 AM, Jeffrey F. Painter wrote:

It looks as though you've been reviewing the public draft of the
future CF Conventions version 1.6. It's great that someone has been
looking at it!

It seems to me that z in the examples of Appendix H (formerly
designated A9) plays the role of an auxiliary coordinate variable,
although technically it's not because there isn't (but should be) a
'coordinates' attribute which lists auxiliary coordinate variables.
I don't know why axes are banned for auxiliary coordinate variables in
the case of trajectories. Something needs to be clarified here, or
the examples changed.

This was ticket 37. Are there any comments from Steve Hankin, the
moderator, or any of the other people who contributed to writing
Chapter 9, or anyone else who knows more than me?

stand by. I think Chris has pointed out a needed correction to Chapter
5 that was discussed, but was not documented. (thanks Chris) But need
to confirm with others.

- Steve




Thanks to all!
- Jeff Painter

On 7/7/11 5:13 AM, Chris Paver wrote:

Dear List,
I have been reviewing the use of the axis attribute as defined in
Chapter 5, and
comparing it to the trajectory example in the Chapter 9 document at
A9.4. The
Ch. 5 rules states that only a coordinate variable can have an axis
attribute,
whereas the auxiliary variables cannot. However, in Ch. 9, the single
trajectory dimension is time, but the variable z contains the axis
attribute. Is
this a change to the rule as stated in Ch. 5, or a typo? I briefly
looked over
the other feature types in Ch. 9, and they all look to have the vertical
variable listed with the axis attribute, so maybe it is a typo.

Thanks,
Chris



___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata

___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata


Re: [CF-metadata] CF feature type trajectory (Ch. 9; May 10, 2011) and axis, attribute

2011-07-26 Thread Jeffrey F. Painter
I added Ticket 62 to my to-do list for CF 1.6.   This is a bit unusual 
in that the ticket has no moderator.   So if there are no objections, 
I'll close the ticket and implement the wording which Jonathan proposed 
on the Trac system on 12/23/10.


I was wrong when I said there were examples without the required 
coordinates attribute - I hadn't looked at them carefully enough.


- Jeff

On 7/26/11 2:13 AM, Jonathan Gregory wrote:

Dear Chris, Jeff, Steve, John


It seems to me that z in the examples of Appendix H (formerly
designated A9) plays the role of an auxiliary coordinate variable,
although technically it's not because there isn't (but should be) a
'coordinates' attribute which lists auxiliary coordinate variables.
I don't know why axes are banned for auxiliary coordinate variables in
the case of trajectories.  Something needs to be clarified here, or
the examples changed.

This was ticket 37.  Are there any comments from Steve Hankin, the
moderator, or any of the other people who contributed to writing
Chapter 9, or anyone else who knows more than me?

stand by.   I think Chris has pointed out a needed correction to Chapter
5 that was discussed, but was not documented.  (thanks Chris)   But need
to confirm with others.

Ticket 62 discusses the proposed change to allow auxiliary coordinate
variables to have the axis attribute. This ticket was originally proposed by
Karl to correct a defect, and I think when we were writing chapter 9 we had
in mind this change. I propose that ticket 62 should be implemented in CF 1.6
(it wasn't one of the tickets I had listed earlier to Jeff - I must have
overlooked it).  In that ticket, I proposed some wording, to which no-one
subsequently objected, and that was many months ago.

Also, Jeff, if there are any examples in App H where a data variables does
not list its aux coord vars in a coordinates attribute, please could you
correct them? This is required, as you say. It says in 9.5, The coordinates
attribute must be attached to every data variable to indicate the
spatiotemporal coordinate variables that are needed to geo-locate the data.

Best wishes and thanks

Jonathan
___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata

___
CF-metadata mailing list
CF-metadata@cgd.ucar.edu
http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata