clj-bigml

[Myriam Abramson]

Is this project still maintained? Does anyone want to fork it to bring
it up-to-date? 

Thanks for any info.
-- 
   myriam

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Re: Incanter 1.9 and Clojure 1.7

[myriam abramson]

How do you get the latest commit on the develop branch?

On Wed, Apr 20, 2016 at 11:46 AM, Bruce Durling  wrote:

> Myriam,
>
> Would you check with the latest commit on the develop branch please?
> We're trying to get a new SNAPSHOT release out that might sort a
> number of issues.
>
> If yours isn't sorted then I might look at it as we use PCA a fair bit too.
>
> Do you have a small example of some code that is failing?
>
> cheers,
> Bruce
>
> On Wed, Apr 20, 2016 at 3:19 PM, myriam abramson 
> wrote:
> > I am getting the following error with Incanter 1.9 running the PCA
> example
> > from the documentation:
> >
> > CompilerException java.lang.ClassCastException: java.lang.Boolean cannot
> be
> > cast to java.lang.Number, compiling:(pca.clj:17:10)
> >
> > That works fine with Clojure 1.6. (and yes, I know that the latest is
> 1.8).
> >
> > What to do?
> >
> >
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Re: Incanter 1.9 and Clojure 1.7

[myriam abramson]

I am running exactly the code in the example given in (doc
principal-components).


On Wed, Apr 20, 2016 at 11:46 AM, Bruce Durling  wrote:

> Myriam,
>
> Would you check with the latest commit on the develop branch please?
> We're trying to get a new SNAPSHOT release out that might sort a
> number of issues.
>
> If yours isn't sorted then I might look at it as we use PCA a fair bit too.
>
> Do you have a small example of some code that is failing?
>
> cheers,
> Bruce
>
> On Wed, Apr 20, 2016 at 3:19 PM, myriam abramson 
> wrote:
> > I am getting the following error with Incanter 1.9 running the PCA
> example
> > from the documentation:
> >
> > CompilerException java.lang.ClassCastException: java.lang.Boolean cannot
> be
> > cast to java.lang.Number, compiling:(pca.clj:17:10)
> >
> > That works fine with Clojure 1.6. (and yes, I know that the latest is
> 1.8).
> >
> > What to do?
> >
> >
> > --
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Incanter 1.9 and Clojure 1.7

[myriam abramson]

I am getting the following error with Incanter 1.9 running the PCA example
from the documentation:

CompilerException java.lang.ClassCastException: java.lang.Boolean cannot be
cast to java.lang.Number, compiling:(pca.clj:17:10)

That works fine with Clojure 1.6. (and yes, I know that the latest is 1.8).

What to do?

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Re: Pmap on hash maps

[myriam abramson]

I like pmap too. I've set the number of processors call with a defonce to
minimize the calls to this function to speed up pmap. What do ya think?

(defn rt-num-processors []
  (.availableProcessors (Runtime/getRuntime)))

(defonce num-processors (rt-num-processors))


On Mon, Apr 18, 2016 at 1:31 AM, Mars0i  wrote:

> On Sunday, April 17, 2016 at 4:23:32 PM UTC-5, JvJ wrote:
>>
>> Orders of magnitude?  Is it even worth running things in parallel in this
>> case?
>>
>
> I got a 2X-5X speed improvement with pmap, but as adrian says, it depends.
>
> The nice thing about  pmap, though, is that using it just involves adding
> a "p" to the front of a map call.  So if you're already using map for
> something, it's easy to test whether pmap helps (preferably using
> Criterium ).
>
> One thing that can help make pmap worthwhile is rearranging code so that
> the function passed to a single map/pmap call does a lot of work with each
> element of the collection passed to it.  If the amount of computation for
> each element is sufficiently high, pmap will be faster.e.g. rather than
> (map f1 (map f2 (map f3 my-collection))), do (map (comp f1 f2 f3)
> my-collection), and then try adding the "p" on the front.  This avoids
> constructing unnecessary intermediate sequences, too.
>
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Re: Clojure community organisation

[myriam abramson]

I did ask Peter Norvig to show support for Clojure with simple programs
like he did with his Python spellchecker. He could even use Clojure for a
new edition of AIMA. But I am not sure he is going to do that.

On Sun, May 3, 2015 at 7:29 PM, Tom Marble  wrote:

> @deepbluelambda:
>
> Thank you for bringing this up! I am, like you, a huge fan of Clojure
> and Free/Libre Open Source Software (and building community).
>
> In the interest of full disclosure I on the Software Freedom
> Conservancy [0] Evaluation Committee and I am a member of Software in
> the Public Interest [1] (and a contributor to Debian -- one of the big
> SPI projects). I would, therefore, need to recuse myself from voting
> on any Clojure community organization.
>
> The key rational you give on the wiki page [2] in asking for
> support from a fiscal sponsorship organization is (in summary):
>
>   A. GSoC (or a program like it) and student conference travel
>   B. Infrastructure (like Clojars)
>   C. User group/event support
>   D. Provide beginner materials and training
>   E. A place to donate to
>
> Let me comment on each of these...
>
>
> A. GSoC
>
> First of all thank you for being being a GSoC mentor!
> As long as Google continues GSoC (and the Clojure community
> can provide motivated mentors and students) there is reduced
> pressure for additional fiscal sponsorship. Often times mentoring
> organizations will use their $500 portion [3] to help subsidize
> student travel. I would guess that if we asked conference
> organizers to support approved GSoC student travel they may
> be able to help bridge any gaps.
>
> I also want to make everyone aware of Outreachy -- a related internship
> program intended to increase diversity in FLOSS [4]. Outreachy
> is symbiotic with GSoC during the "summer" sessions: Outreachy
> applicants that qualify for GSoC are encouraged to do so.
> Unlike GSoC Outreachy applicants do *not* need to be students and
> Outreachy offers a "winter" session. Outreachy is now a member
> of SFC (and thus can take donations).
>
>
> B. Infrastructure (like Clojars)
>
> I think everyone will agree with me that we owe a lot of gratitude
> to @atosborne @technomancy @tcrawley and @xeqixeqi for making
> Clojars awesome (and an essential part of our Clojure workflow).
>
> I notice that some of the costs are (or at least were) covered
> by sponsors such as Heroku [5]. I am not clear on how additional
> funding could or would be used for Clojars: I think we'd need hear
> opinions on that from the Clojars maintainers directly.
> (That being said I'd definitely donate!)
>
> Both @htmfilho and @albinst brainstormed about additional
> infrastructure ideas (which are cool and I bet there many more)!  One
> tool I use all the time is Grimoire [6] and I wonder if @arrdem has
> what he needs for this (or could do more with more support)?
>
> I'm sort of torn about this... on the one hand I love the idea
> of supporting cool tools, but on the other hand I'm worried
> about how funds would be managed/distributed to toolmakers.
> I think many of the cool tools we already have are works
> of pure passion.
>
>
> C. User group/event support
>
> Typically fiscal sponsorship organizations help projects
> run their own conferences. I can't even imagine trying to outdo
> the amazing conferences put on by @puredanger @lynngrogan
> and Cognitect. What's more I have to recognize conferences like
> Clojure Conj, Clojure/West and Strangeloop for offering
> opportunity grants [7] and diversity scholarships [8].
>
> So if we don't run the conferences and the conferences already support
> diversity and we might have at least a partial solution for students
> (see above) then there may not be very much additional sponsorship
> needed???
>
> It's important to point out that our really cool ClojureBridge
> events [9] benefit already from the fiscal sponsorship of
> BridgeFoundry [10]. (advertisement: @ClojureBridgeMN [11] is
> hosting three more workshops this year in the Twin Cities...
> ask me how you can sponsor ClojureBridge to be even more awesome!)
>
> As for user groups my guess is that local groups can attract local
> sponsors for any other events. I'm not sure there's enough events in
> this category (not covered by conferences and ClojureBridge) to
> justify having a fiscal sponsorship organization.
>
>
> D. Provide beginner materials and training
>
> Providing fiscal sponsorship for beginner materials is tricky
> in the same way funding B. Infrastructure is.
>
> And I'll point out that there already are some community
> resources for beginner materials (including ClojureBridge [12]).
> Don't get me wrong.. I'm all in favor of more and better
> beginner materials! (Well, maybe is fewer/concise materials
> are "more", but that's another story...)
>
> My guess is that training is tricky for a different reason:
> training involves more money, more engineer time (vs. supporting
> infrastructure) and already has competitive commercial offerings.
> I'

Re: Clojure/conj Speakers and Opportunity Grants

[myriam abramson]

Will the videos be uploaded somewhere?


On Tue, Sep 9, 2014 at 5:02 PM, Alex Miller  wrote:

> *Clojure/conj - Nov 20-22, 2014*
> Warner Theater - Washington, DC
> http://clojure-conj.org/
> Tickets
> : $350
> Training
> :
> Intro to Clojure (2 days, $795), Intro to Datomic (1 day, $395)
>
> The Clojure/conj *speakers and talks* have been announced
> :
>
> - Brian Goetz - *Keynote* by the Java Language Architect
> - Rich Hickey - *Transducers*
> - Anna Pawlicka - *Om nom nom nom*
> - Ashton Kemerling - *Generative Integration Tests*
> - Bozhidar Batsov - *The evolution of the Emacs tooling for Clojure*
> - Colin Fleming - *Cursive: a different type of IDE*
> - David Pick - *Building a Data Pipeline with Clojure and Kafka*
> - Ghadi Shayban - *JVM Creature Comforts*
> - Glenn Vanderburg - *Cló: The Algorithms of TeX in Clojure*
> - Jeanine Adkisson - *Variants are Not Unions*
> - Julian Gamble - *Applying the paradigms of core.async in ClojureScript*
> - Lucas Cavalcanti, Edward Wible - *Exploring Four Hidden Superpowers of
> Datomic*
> - Michał Marczyk - *Persistent Data Structures for Special Occasions*
> - Nathan Herzing, Chris Shea - *Helping voters with Pedestal, Datomic, Om
> and core.async*
> - Steve Miner - *Generating Generators*
> - Steven Yi - *Developing Music Systems on the JVM with Pink and Score*
> - Paul deGrandis - *Unlocking Data-Driven Systems*
> - Zach Oakes - *Making Games at Runtime with Clojure*
> - Zach Tellman - *Always Be Composing*
>
> Clojure/conj is also pleased to announce our first ever *Opportunity
> Grant* program to support community members who would not otherwise be
> able to attend the conference for financial reasons. For more information
> on applying, see http://clojure-conj.org/grants.
>
> We hope you can join us at Clojure/conj 2014! It's going to be a great
> show.
>
> - Alex Miller, Lynn Grogan, and Cognitect
>
>
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Re: Need some Advice for my Prolog Project

[myriam abramson]

Good idea! But I would build it on top of Clojure. Maybe something like
Norvig did in his "Paradigms" book. Of course, it depends on how ambitious
you want to be.


On Wed, May 15, 2013 at 12:17 PM, Charles Hoskinson <
charles.hoskin...@gmail.com> wrote:

> I'm starting an open sourced project to port Prolog to the JVM like you
> guys did with LISP and I'd like to get some advice on where to start,
> materials to review, pitfalls to avoid, and anything else you feel would be
> useful to know. Could you either post here or contact me at
> charles.hoskin...@gmail.com
>
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PPAML

[Myriam Abramson]

http://www.darpa.mil/Our_Work/I2O/Programs/Probabilistic_Programming_for_Advanced_Machine_Learning_%28PPAML%29.aspx

I just went to the Proposer's day for this program this morning. It's
more a programming language program than a machine learning
program. They are interested in a probabilistic programming language
built on top of a host language. Naturally, I thought that Clojure
would be perfect for that. There are 4 technical areas and my
understanding is that separate proposals have to be submitted for each
one. They will favor teams of TA2 and TA4. They don't expect many
proposals for TA3. Well, that's all I have off the top of my head
right now.

   myriam


>From the cat's little instruction handbook:

Beware of lit cigarettes.

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Fitting data to distributions with Incanter

[myriam abramson]

Sorry, for posting here. I am not sure if the Incanter mailing list is
active nowadays and I need an answer to this question soon.
Is there an easy way to fit data to distributions with Incanter similar to
fitdistr in R?
TIA

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Re: community interest in machine learning (?)

[myriam abramson]

Yes, I am interested too. All I have done is an implementation of HMM and I
am looking to use clj-ml to interface with Weka.

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Re: Explaining the thrush -> operator.

[myriam abramson]

This is all very nice but it seems to me to be a case of less is more (or
more is less).  I mean, if I am used to read inside out easily, this
operator just makes my life harder. I don't plan to use it but
unfortunately to understand other people's code, I have to switch mindset.

On Sat, Jun 9, 2012 at 12:27 PM, fenton  wrote:

> Noted and updated!  Thx.
>
>
> On Friday, June 8, 2012 11:02:50 AM UTC-7, fenton wrote:
>>
>> I created a tutorial explaining what the thrush -> and ->> operator is.
>>
>> https://github.com/ftravers/**PublicDocumentation/blob/**
>> master/clojure-thrush.md
>>
>> My tutorials are aimed at people who appreciate VERY explicit
>> explanations, which I think there is a bit of a gap among current internet
>> available literature.
>>
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Viterbi

[myriam abramson]

Hello,
I was wondering if you could give me some advice on my Viterbi algorithm in
clojure posted at git://gist.github.com/2301728.git.
I am a complete novice at Clojure. Hopefully, we could include it as an
implementation on the Wikipedia page for the Viterbi algorithm.

TIA,
melipone

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Re: Help! Migrating to 1.3.0

[myriam abramson]

I couldn't find quite the equivalent to read-lines from duck-streams. I
found read-line but it's not the same. Where is the equivalent read-lines
outside of clojure.contrib?

On Fri, Jan 13, 2012 at 9:51 PM, Stephen Compall  wrote:

> On Fri, Jan 13, 2012 at 11:47 AM,   wrote:
> > Warning: *default-encoding* not declared dynamic and thus is not
> dynamically
> > rebindable, but its name suggests otherwise. Please either indicate
>
> More indirectly, stop using clojure-contrib and move to
> http://dev.clojure.org/display/design/Where+Did+Clojure.Contrib+Go .
> In the selected example, duck-streams was replaced with the included
> clojure.java.io in Clojure 1.2.
>
> --
> Stephen Compall
> "^aCollection allSatisfy: [:each | aCondition]": less is better than
>
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Re: Adding a jar to dependencies in lein

[myriam abramson]

Thanks, I didn't know about that.

On Fri, Nov 11, 2011 at 4:47 PM, joegallo  wrote:

> Go to search.maven.org, and type in jericho-html.  That'll take you to
> some results pages that will tell you the versions that are available, and
> also the correct groupId and artifactId.
>
> Then you add into project.clj the following [groupId/artifactId
> "version"].  In this case, [net.htmlparser.jericho/jericho-html "3.2"]
> should work.
>
> Joe
>
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Adding a jar to dependencies in lein

[myriam abramson]

I want to interface with the Jericho html-parser available from
sourceforge. How do I specify it in project.clj for lein to fetch?

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Re: clojure and emacs

[myriam abramson]

Yes, keeping track of all those versions is tricky. At the moment, the Lein
method in emacs seems simple enough. We'll see.

On Sat, Sep 3, 2011 at 10:06 PM, Li Zhixiong wrote:

> Basically, the problem I get is due to version conflict between
> swank-clojure and slime, I download the same version as swank-clojure, that
> is, 20100404, then it works.
>
>
> On Sun, Sep 4, 2011 at 8:19 AM, myriam abramson wrote:
>
>>
>> Thanks. I am getting some slime errors unfortunately. I'll have to track
>> that down.
>>
>> On Thu, Sep 1, 2011 at 1:36 PM, Paul Nakata  wrote:
>>
>>> On Thursday, September 1, 2011 10:03:13 AM UTC-7, melipone wrote:
>>>>
>>>> I do like "lein repl" on the command line. How can I have that in emacs?
>>>>
>>>> Basically, if I have a project in Lein, how can I do a (require
>>>> 'projectname) and have all the libraries loaded in emacs?
>>>> I'm just using M-x inferior-lisp at this point. I find swank-clojure too
>>>> complex for right now. Maybe later.
>>>>
>>>> TIA
>>>> melipone
>>>
>>>
>>> I use clojure-jack-in as described here: http://technomancy.us/149 ,
>>> although if you find swank-clojure too complex for you it may not be a great
>>> fit. I have personally found clojure-jack-in to be very simple and easy to
>>> use; I would advocate at least trying it out.
>>>
>>> --
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>>
>>
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>
>
>
> --
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> Yours sincerely, Li Zhixiong
>
>
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Re: Stanford AI Class

[myriam abramson]

Good news! The FAQ mentions that any programming language will do.

On Mon, Aug 8, 2011 at 2:47 PM,  wrote:

> As most of you probably already know, Peter Norvig and S. Thrun will offer
> a free online intro to AI class in the Fall. The problem is that it will
> probably require Python since the third edition of the book is in Python. I
> am somewhat upset that this will make Python the de facto language of AI for
> a very large number of students. I was hoping for Clojure frankly or have
> some breathing room. Anybody knows anything about that?

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Re: clojure and emacs

[myriam abramson]

Thanks. I am getting some slime errors unfortunately. I'll have to track
that down.

On Thu, Sep 1, 2011 at 1:36 PM, Paul Nakata  wrote:

> On Thursday, September 1, 2011 10:03:13 AM UTC-7, melipone wrote:
>>
>> I do like "lein repl" on the command line. How can I have that in emacs?
>> Basically, if I have a project in Lein, how can I do a (require
>> 'projectname) and have all the libraries loaded in emacs?
>> I'm just using M-x inferior-lisp at this point. I find swank-clojure too
>> complex for right now. Maybe later.
>>
>> TIA
>> melipone
>
>
> I use clojure-jack-in as described here: http://technomancy.us/149 ,
> although if you find swank-clojure too complex for you it may not be a great
> fit. I have personally found clojure-jack-in to be very simple and easy to
> use; I would advocate at least trying it out.
>
> --
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Re: Stanford AI Class

[Myriam Abramson]

I'm just concerned that teaching AI to 25K+ students is going to have an
impact and it shouldn't be because P. Norvig didn't publish the next edition
of AIMA. I wish they would realize that and change their mind on the
assignments for the class. Even Javascript is more suitable for AI than
Python!

On Sat, Aug 13, 2011 at 5:14 PM, Ken Wesson  wrote:

> On Sat, Aug 13, 2011 at 1:36 PM, Lee Spector 
> wrote:
> > As someone who works on code-modifying AI (genetic programming, much
> along the lines described above -- which, BTW, I would expect Thrun and
> Norvig to mention only briefly, if at all... but that's a debate for a
> different forum) I find that languages that make code manipulation simple
> and elegant do help one to experiment and develop these kinds of AI systems
> more easily.
> >
> > But this is true whether the manipulated code is compiled and executed in
> the normal way or treated as a data structure and interpreted in some other
> way.
> >
> > On the one hand most people who work in genetic programming these days
> write in non-Lisp languages but evolve Lisp-like programs that are
> interpreted via simple, specialized interpreters written in those other
> languages (C, Java, whatever).
>
> The ultimate in Greenspunning. :)
>
> --
> Protege: What is this seething mass of parentheses?!
> Master: Your father's Lisp REPL. This is the language of a true
> hacker. Not as clumsy or random as C++; a language for a more
> civilized age.
>
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Re: Parsing HTML in clojure

[Myriam Abramson]

Me too, starting in October. I still need to get up to speed with Clojure
however.

On Sun, Jun 5, 2011 at 11:04 PM, Andreas Kostler <
andreas.koestler.le...@gmail.com> wrote:

> There's a Java library called HtmlCleaner. You might wanna give that a
> shot.
> Btw, I'm working on quite a similar project so if you like email me and we
> can maybe join forces.
> Andreas
>
> On 06/06/2011, at 11:01 AM, Base wrote:
>
> > hi all,
> >
> > I am working on an app that will parse web pages to do some NLP and
> > statistics.  I am able to parse the HTML using several different tool
> > ( enlive, HTML parser, etc).  However I would like to discard all the
> > rest of the junk in the web page that is not pertinent (I.e. Ads).
> > Does anyone have any experience doing this?  Any tips On how to do
> > this - or even better, tools that you can recommend?   I have been
> > digging around on this for a while now and am stuck!
> >
> > Thanks!
> >
> > Base
> >
> > --
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Re: HPC in scala ..

[Myriam Abramson]

Hi Chad!

Where are you at NRL? I'm also working there. I was dreaming of having 
a clojure users group there. 


-- 
   myriam
cej38  writes:

> I am currently at the Naval Research Laboratory, Washington DC.
>
> Chad
>
>
>
> On Jan 18, 11:59 am, Konrad Hinsen  wrote:
>> On 18 Jan, 2011, at 17:37 , cej38 wrote:
>>
>> > I think the clojure community should be seeking the type of funding to
>> > make it the goto language for HPC.  As a community we definitely have
>> > the brains to make it happen.
>>
>> The brains, yes, but not the academic infrastructure. Scala is based at 
>> EPFL, and the work on parallel programming is done in collaboration with 
>> Stanford. That makes all of a difference when applying for funding in the 
>> academic world, such as the ERC grant that the Scala guys got.
>>
>> Just out of curiosity: is there anyone else on this list who has an 
>> affiliation with an academic institution? Perhaps we could get together and 
>> see if we can apply for an interesting grant for some Clojure-related work.
>>
>> Konrad.

>From the cat's little instruction handbook:

Learn to appreciate fine books -- especially when somebody else is
reading them.

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Re: CL libraries - Newbie question

[Myriam Abramson]

David Nolen  writes:

> Not unless you port it ;)
>

Is there something to do that easily? After all the syntax is not that
much different and that's what lisp do well. 

On May 8, 7:17 pm, André Thieme  wrote:
> In principle you could run Clojure and ABCL inside the same VM.  
> http://common-lisp.net/project/armedbear/

>>That sounds like a nightmare.  You still couldn't call a CL function
>> directly from Clojure without some Java in between.

Jikes! I hope a solution will emerge. 


-- 
   myriam

>From the cat's little instruction handbook:

No matter how old you are, never be afraid to express the kitten
within you.

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