Re: [COOT] WinCoot Issue
Hi Ian, I am trying to run wincoot on a Windows7 (64bit) machine . Coot installs and starts up fine, with all the tool bars just fine, but the display will not show anything ( keeps the desktop image in the coot window as i try and move it around). I have set all the desktop and graphics settings as suggested in the FAQ (using windows classic etc). Has anyone else been able to solve a similar problem? Are you running Coot in Full Screen mode? And more importantly do you have an 'auto-hide' Windows taskbar. The latter supposedly causes this problem. So please try to disable the autohide Taskbar. http://www.ysbl.york.ac.uk/~lohkamp/coot/wincoot-faq.html#mozTocId514994 Hope this helps, B -- *** Dr. Bernhard Lohkamp Assistant Professor Div. Molecular Structural Biology Dept. of Medical Biochemistry and Biophysics (MBB) Karolinska Institutet S-17177 Stockholm Sweden phone: (+46) 08-52487651 fax: (+46) 08-327626 email: bernhard.lohk...@ki.se
Re: [COOT] Coot 0.6.0 and sequence view
Stefan Becker wrote: recently I installed Coot 0.6.0 and had so far no problems using it. Now I wanted to use it combined with shelxl refinement but encounter the problem that the Sequence view window in the Coot 0.6.0 version doesn´t present the chains as in earlier versions. I must number chains in Coot e.g. 1001, 2001, 3001 etc. for creating the shelxl .ins file. Now the sequence view in the new Coot version positions the chains along a number line and this line stops after 3245, so that I cannot see e.g. the glycerols that are in the 3000 range and the waters that are in the 4000 range. With the older Coot versions this was not an issue. There all chains were listed in rows below each other and there was no number line. Confirmed - even in the latest 0.6.2 pre. This needs to be fixed. Thanks, Paul.
[COOT] PyGTK in standalone OS X builds
When I use the 0.6.1 package from Bill's web site, I get this error when I try to start the Python scripting GUI: COOT_PYTHON_DIR was defined to be /usr/local/xtal/coot64/share/coot/python but no PyGtk and hence no coot_gui. Not sure what to do about this, because it appears to have the module installed: nat:~ ls /usr/local/xtal/coot64/lib/python2.6/site-packages/ README cairo gtk-2.0 numpy numpy-1.3.0-py2.6.egg-info pygtk.pth pygtk.py pygtk.pyo thanks, Nat
Re: [COOT] PyGTK in standalone OS X builds
Check /usr/local/xtal/coot64/bin/coot to see if I set $PYTHONPATH right. It should have /usr/local/xtal/coot64/lib/python2.6/site-packages/gtk-2.0 Nathaniel Echols wrote: When I use the 0.6.1 package from Bill's web site, I get this error when I try to start the Python scripting GUI: COOT_PYTHON_DIR was defined to be /usr/local/xtal/coot64/share/coot/python but no PyGtk and hence no coot_gui. Not sure what to do about this, because it appears to have the module installed: nat:~ ls /usr/local/xtal/coot64/lib/python2.6/site-packages/ README cairo gtk-2.0 numpy numpy-1.3.0-py2.6.egg-info pygtk.pth pygtk.py pygtk.pyo thanks, Nat
