Francesco Pietra wrote:
Experience with installing openmpi-1.3.1 with libnuma support?
With debian linux amd64 lenny and openmpi-1.3.1 (dual-opterons)
./configure cc=/opt/intel/cce/10.1.015/bin/icc
cxx=/opt/intel/cce/10.1.015/bin/icpc
F77=/opt/intel/fce/10.1.015/bin/ifort
FC=/opt/intel/fce/10.1.015/bin/ifort --with-libnuma=/usr/lib
failed because
expected file /usr/lib/include/numa.h was not found
In debian amd64 lenny numa.h has a different location
/usr/include/numa.h.
I am not sure if placing a symlink in /usr/lib/include to /usr/include
will be a safe solution. For any better idea, thanks. I regret to have
to use ifort as amber runs faster with it (I could have set gcc above
because amber uses the Fortran compiler only)
francesco pietra
Hi Francesco / list
I haven't tried that particular setup, but from the output of 'configure
--help' in openmpi-1.2.5 it looks like you can use CPPFLAGS or FCFLAGS
to add custom include paths:
CPPFLAGSC/C++/Objective C preprocessor flags, e.g. -Iinclude dir if
you have headers in a nonstandard directory include dir
...
FCFLAGS Fortran compiler flags
So you could try adding '-I/usr/include' there.
Cheers, Jonas
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