Bug#886585: Suggests / Recommends two non-existent packages: python-scitools and python-mshr
Package: fenics Version: 1:2017.1.0.1 Severity: minor Hi, I tried to install the Suggested and Recommended packages, but found two are non-existent. python-scitools: appears to have existed at one time, but now removed from Debian; see https://packages.qa.debian.org/s/scitools/news/20160506T061253Z.html This Recommends should probably be removed (?). python-mshr: I guess this is the binary package of src:mshr that is stalled due to using embedded, modified copy of CGAL; c.f. https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=824716 -Steve -- System Information: Debian Release: buster/sid APT prefers unstable APT policy: (500, 'unstable') Architecture: amd64 (x86_64) Foreign Architectures: i386 Kernel: Linux 4.14.0-2-amd64 (SMP w/4 CPU cores) Locale: LANG=en_CA.UTF-8, LC_CTYPE=en_CA.UTF-8 (charmap=UTF-8), LANGUAGE= (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled Versions of packages fenics depends on: ii dolfin-bin 2017.1.0-4 ii dolfin-doc 2017.1.0-4 ii libdolfin-dev 2017.1.0-4+b4 ii python-dijitso 2017.1.0-3 ii python-dolfin 2017.1.0-4+b4 ii python-ffc 2017.1.0-2 ii python-fiat 2017.1.0-2 ii python-instant 2017.1.0-2 ii python-ufl 2017.1.0-2 ii python-ufl-doc 2017.1.0-2 Versions of packages fenics recommends: pn python-scitools Versions of packages fenics suggests: pn python-mshr -- no debconf information -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#857491: Computation of top_dir is fooled by README
Package: python-sfepy Version: 2016.2-2 Severity: normal I tried to run the examples using: sfepy-run simple examples/diffusion/poisson_short_syntax.py and obtained: sfepy: left over: ['verbose', '__builtins__', '__file__', '__doc__', '__name__', 'data_dir', '__package__', '_filename'] sfepy: reading mesh [line2, tri3, quad4, tetra4, hexa8] (/usr/lib/python2.7/dist-packages/meshes/3d/cylinder.mesh)... ... which fails because the mesh path is wrong. There needs to be a sfepy after dist-packages. The root cause of this is the computation of "top_dir" in version.py: # If installed, up_dir is '.', otherwise (in (git) source directory) '..'. for up_dir in ['..', '.']: top_dir = op.normpath(op.realpath(op.join(op.dirname(__file__), up_dir))) aux = op.join(top_dir, 'README') if op.isfile(aux): break else: raise RuntimeError('cannot determine SfePy top level directory!') The trouble is that ".." is tried first and there happens to be a README file at that path: /usr/lib/python2.7/dist-packages/README ! There's an obvious Debian-only fix to remove '..' in version.py, which is what I've done locally for now. -- System Information: Debian Release: 9.0 APT prefers unstable APT policy: (500, 'unstable') Architecture: amd64 (x86_64) Foreign Architectures: i386 Kernel: Linux 4.9.0-2-amd64 (SMP w/4 CPU cores) Locale: LANG=en_CA.UTF-8, LC_CTYPE=en_CA.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Init: systemd (via /run/systemd/system) Versions of packages python-sfepy depends on: ii ipython 5.1.0-3 ii libc6 2.24-9 ii libsuitesparse-dev1:4.5.4-1 ii mayavi2 4.5.0-1 ii python2.7.13-2 ii python-matplotlib 2.0.0+dfsg1-2 ii python-numpy [python-numpy-abi9] 1:1.12.0-2 ii python-pyparsing 2.1.10+dfsg1-1 ii python-scipy 0.18.1-2 ii python-sparse 1.1.1-1 ii python-tables 3.3.0-5 pn python:any python-sfepy recommends no packages. python-sfepy suggests no packages. -- no debconf information -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#844373: ros-image-common: FTBFS (incompatible build-dependencies)
On Tuesday, November 15, 2016 1:02:10 AM CST Santiago Vila wrote: > Package: librospack-dev,libgtest-dev,src:ros-image-common > Severity: serious > > Dear maintainer: > > I tried to build ros-image-common in stretch with "dpkg-buildpackage -A" > (which is what the "Arch: all" autobuilder would do to build it) > but it failed: > > > [...] > Unpacking librospack-dev (2.3.1-1+b1) ... > dpkg: error processing archive > /tmp/apt-dpkg-install-dJJuDK/111-librospack-dev_2.3.1-1+b1_amd64.deb > (--unpack): trying to overwrite '/usr/include/gtest/gtest-death-test.h', > which is also in package libgtest-dev:amd64 1.7.0-4 dpkg-deb: error: > subprocess paste was killed by signal (Broken pipe) I think it should be clear that /usr/include/gtest is owned by libgtest-dev, so I'll reassign the bug to librospack-dev. Best case: librospack-dev can use Debian's libgtest-dev. If not, then please place the files somewhere else. > OTOH, if one of the packages librospack-dev or libgtest-dev should not > contain the file, then please reassign to the package at fault and > also send an "affects" command to the control address, so that we can > still see that this bug affects src:ros-image-common in its BTS web page. > > Sorry that I can't tell for sure which one of those cases is the truth, > I just detected this problem by trying to build ros-image-common. > > Thanks. signature.asc Description: This is a digitally signed message part. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: Comments regarding ipe_7.2.4-1_amd64.changes
On Monday, June 27, 2016 12:38:45 PM CDT Chris Lamb wrote: > please clarify src/ipelib/ipebitmap.cpp Can I request that you ask a more specific question, please? Thanks, -Steve signature.asc Description: This is a digitally signed message part. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#822129: Boost 1.55 to be removed; your attention required
Package: diet Severity: normal Boost 1.55 has not built correctly since the GCC 5 introduction in July 2015 and I plan to ask for its removal from unstable very shortly. It has already been removed from testing. The package diet appeared on a list of reverse dependencies generated using 'dak rm -Rn boost1.55' (see below). This bug is to request an upload with updated boost dependencies. If your package build-depends on the default boost, then a simple rebuild will suffice. If your package uses 1.55-versioned build-deps, then please check whether you can move to default boost. Or if not, at least move to 1.58. Output from ssh mirror.ftp-master.debian.org "dak rm -Rn boost1.55" follows. Checking reverse dependencies... # Broken Depends: ball: ballview [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libball1.4 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libballview1.4 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] python-ball [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] python-ballview [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] cufflinks/non-free: cufflinks [amd64] diet: diet-agent [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libdiet-admin2.8 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libdiet-client2.8 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libdiet-dagda2.8 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libdiet-sed2.8 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] feel++: feel++-apps [amd64 i386 powerpc] libfeel++1 [amd64 i386 powerpc] gqrx-sdr: gqrx-sdr [kfreebsd-amd64 kfreebsd-i386] gr-air-modes: gr-air-modes [kfreebsd-amd64 kfreebsd-i386] libair-modes0 [kfreebsd-amd64 kfreebsd-i386] gr-osmosdr: gr-osmosdr [kfreebsd-amd64 kfreebsd-i386] libgnuradio-osmosdr0.1.3 [kfreebsd-amd64 kfreebsd-i386] kig: kig [hurd-i386] librime: librime-bin [hurd-i386] librime1 [hurd-i386] limereg: limereg [mips mipsel] mongodb: mongodb-clients [hurd-i386 kfreebsd-i386] mongodb-server [hurd-i386 kfreebsd-i386] openvrml: libopenvrml9 [amd64 armel armhf i386 mips mipsel powerpc ppc64el s390x] openvrml-lookat [amd64 armel armhf i386 mips mipsel powerpc ppc64el s390x] pcb2gcode: pcb2gcode [kfreebsd-amd64 kfreebsd-i386] qbittorrent: qbittorrent [kfreebsd-amd64 kfreebsd-i386] qbittorrent-nox [kfreebsd-amd64 kfreebsd-i386] qpid-cpp: libqpidcommon2 [amd64 arm64 i386 mipsel powerpc ppc64el] qpidd [amd64 arm64 i386 mipsel powerpc ppc64el] smc: smc [amd64 armel armhf i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc s390x] swift-im: libswiften-dev [amd64 arm64 armel armhf i386 mips mipsel powerpc ppc64el s390x] libswiften2 [amd64 arm64 armel armhf i386 mips mipsel powerpc ppc64el s390x] swift-im [amd64 arm64 armel armhf i386 mips mipsel powerpc ppc64el s390x] -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#822125: Boost 1.55 to be removed; your attention required
Package: limereg Severity: normal Boost 1.55 has not built correctly since the GCC 5 introduction in July 2015 and I plan to ask for its removal from unstable very shortly. It has already been removed from testing. The package limereg appeared on a list of reverse dependencies generated using 'dak rm -Rn boost1.55' (see below). This bug is to request an upload with updated boost dependencies. If your package build-depends on the default boost, then a simple rebuild will suffice. If your package uses 1.55-versioned build-deps, then please check whether you can move to default boost. Or if not, at least move to 1.58. Output from ssh mirror.ftp-master.debian.org "dak rm -Rn boost1.55" follows. Checking reverse dependencies... # Broken Depends: ball: ballview [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libball1.4 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libballview1.4 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] python-ball [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] python-ballview [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] cufflinks/non-free: cufflinks [amd64] diet: diet-agent [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libdiet-admin2.8 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libdiet-client2.8 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libdiet-dagda2.8 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libdiet-sed2.8 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] feel++: feel++-apps [amd64 i386 powerpc] libfeel++1 [amd64 i386 powerpc] gqrx-sdr: gqrx-sdr [kfreebsd-amd64 kfreebsd-i386] gr-air-modes: gr-air-modes [kfreebsd-amd64 kfreebsd-i386] libair-modes0 [kfreebsd-amd64 kfreebsd-i386] gr-osmosdr: gr-osmosdr [kfreebsd-amd64 kfreebsd-i386] libgnuradio-osmosdr0.1.3 [kfreebsd-amd64 kfreebsd-i386] kig: kig [hurd-i386] librime: librime-bin [hurd-i386] librime1 [hurd-i386] limereg: limereg [mips mipsel] mongodb: mongodb-clients [hurd-i386 kfreebsd-i386] mongodb-server [hurd-i386 kfreebsd-i386] openvrml: libopenvrml9 [amd64 armel armhf i386 mips mipsel powerpc ppc64el s390x] openvrml-lookat [amd64 armel armhf i386 mips mipsel powerpc ppc64el s390x] pcb2gcode: pcb2gcode [kfreebsd-amd64 kfreebsd-i386] qbittorrent: qbittorrent [kfreebsd-amd64 kfreebsd-i386] qbittorrent-nox [kfreebsd-amd64 kfreebsd-i386] qpid-cpp: libqpidcommon2 [amd64 arm64 i386 mipsel powerpc ppc64el] qpidd [amd64 arm64 i386 mipsel powerpc ppc64el] smc: smc [amd64 armel armhf i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc s390x] swift-im: libswiften-dev [amd64 arm64 armel armhf i386 mips mipsel powerpc ppc64el s390x] libswiften2 [amd64 arm64 armel armhf i386 mips mipsel powerpc ppc64el s390x] swift-im [amd64 arm64 armel armhf i386 mips mipsel powerpc ppc64el s390x] -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#822120: Boost 1.55 to be removed; your attention required
Package: feel++ Severity: normal Boost 1.55 has not built correctly since the GCC 5 introduction in July 2015 and I plan to ask for its removal from unstable very shortly. It has already been removed from testing. The package feel++ appeared on a list of reverse dependencies generated using 'dak rm -Rn boost1.55' (see below). This bug is to request an upload with updated boost dependencies. If your package build-depends on the default boost, then a simple rebuild will suffice. If your package uses 1.55-versioned build-deps, then please check whether you can move to default boost. Or if not, at least move to 1.58. Output from ssh mirror.ftp-master.debian.org "dak rm -Rn boost1.55" follows. Checking reverse dependencies... # Broken Depends: ball: ballview [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libball1.4 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libballview1.4 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] python-ball [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] python-ballview [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] cufflinks/non-free: cufflinks [amd64] diet: diet-agent [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libdiet-admin2.8 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libdiet-client2.8 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libdiet-dagda2.8 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] libdiet-sed2.8 [amd64 arm64 armel armhf hurd-i386 i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc ppc64el s390x] feel++: feel++-apps [amd64 i386 powerpc] libfeel++1 [amd64 i386 powerpc] gqrx-sdr: gqrx-sdr [kfreebsd-amd64 kfreebsd-i386] gr-air-modes: gr-air-modes [kfreebsd-amd64 kfreebsd-i386] libair-modes0 [kfreebsd-amd64 kfreebsd-i386] gr-osmosdr: gr-osmosdr [kfreebsd-amd64 kfreebsd-i386] libgnuradio-osmosdr0.1.3 [kfreebsd-amd64 kfreebsd-i386] kig: kig [hurd-i386] librime: librime-bin [hurd-i386] librime1 [hurd-i386] limereg: limereg [mips mipsel] mongodb: mongodb-clients [hurd-i386 kfreebsd-i386] mongodb-server [hurd-i386 kfreebsd-i386] openvrml: libopenvrml9 [amd64 armel armhf i386 mips mipsel powerpc ppc64el s390x] openvrml-lookat [amd64 armel armhf i386 mips mipsel powerpc ppc64el s390x] pcb2gcode: pcb2gcode [kfreebsd-amd64 kfreebsd-i386] qbittorrent: qbittorrent [kfreebsd-amd64 kfreebsd-i386] qbittorrent-nox [kfreebsd-amd64 kfreebsd-i386] qpid-cpp: libqpidcommon2 [amd64 arm64 i386 mipsel powerpc ppc64el] qpidd [amd64 arm64 i386 mipsel powerpc ppc64el] smc: smc [amd64 armel armhf i386 kfreebsd-amd64 kfreebsd-i386 mips mipsel powerpc s390x] swift-im: libswiften-dev [amd64 arm64 armel armhf i386 mips mipsel powerpc ppc64el s390x] libswiften2 [amd64 arm64 armel armhf i386 mips mipsel powerpc ppc64el s390x] swift-im [amd64 arm64 armel armhf i386 mips mipsel powerpc ppc64el s390x] -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#780186: GMP doesn't manage memory correctly
On Tue, Mar 10, 2015 at 09:07:52AM +0100, Julien Puydt wrote: > Package: gmp > Version: 2:6.0.0+dfsg-6 > > Hi, > > the sagemath software is using MPIR, but we're trying to package it for > debian using the default lib for multi-precision arithmetic : GMP. > > Sagemath uses mp_set_memory_functions to override the default memory > management and make it better for their purpose (trigger their error > handling), but there are places where gmp still calls its own functions! Please list the places. > And we have a failing test in their suites where an abort is triggered, > because _mpz_realloc in mpz/realloc.c is called instead of the > sagemath-provided realloc. "their" suites -- is that a GMP test suite or something else? > GMP shouldn't call its own realloc if a better one has been provided. I'll need more information to process this bug further. Thanks, -Steve signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: Bug#745233: libhogweed2: should have versioned depend on newer libgmp10
Well, Thank you. On April 21, 2014 04:56:21 PM Niels Möller wrote: > Magnus Holmgren writes: > > Oh well, I went ahead and did it for you. However, as you can see, some > > symbols went missing in both 5.1 and 6.0. > > Are those the ones in the #MISSING: lines in your file? They are all > undocumented internal functions in GMP. I think I understand the rationale for using the super-fine-grained symbol versioning. If someone from the debian-science-maintainers team would like to maintain this file, please go ahead and commit it to the repository. Unfortunately, I don't have the time to audit each release; so if left to me, I will use the easy and conservative "dh_makeshlibs -V" solution. Regards, -Steve signature.asc Description: This is a digitally signed message part. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: Bug#744302: mpz_invert behavior -addendum
On April 22, 2014 07:43:18 PM Benjamin Eltzner wrote: > Ah, yes, sorry I forgot about that. The bug can be closed. Done. For future reference: you can close the bug yourself simply by emailing nnn-d...@bugs.debian.org. Regards, -Steve signature.asc Description: This is a digitally signed message part. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: Bug#745233: libhogweed2: should have versioned depend on newer libgmp10
On April 20, 2014 06:59:31 PM Magnus Holmgren wrote: > reassign 745233 libgmp10 > retitle 745233 libgmp10: Wrong shlibs information after 6.0.0 adds new > symbols affects 745233 libhogweed2 > thanks > > söndagen den 20 april 2014 12.55.09 Ivo De Decker: > > On Sun, Apr 20, 2014 at 01:14:18AM +0200, Magnus Holmgren wrote: > > > That kind of thing should never happen; that's what we have shlibs and > > > symbols files for. Do you know if there's any reason that libgmp10 > > > doesn't include a symbols file and/or declare new a minimum version in > > > it's shlibs file? > > > > I agree that this shouldn't happen, but I don't know why libgmp10 doesn't > > include symbols or shlibs files that enforce this dependency. I'm adding a > > Cc to to gmp maintainers. Well, the reason would be ignorance and sloth on my part. :-( > I think I can even dare reassign the bug. Please update the dh_makeshlibs > command for gmp 6.0.0 So to be sure: adding "-V" is the right thing to do here? Thanks, -Steve signature.asc Description: This is a digitally signed message part. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#744302: mpz_invert yields wrong result
On Sat, Apr 12, 2014 at 07:08:35PM +0200, Benjamin Eltzner wrote: > I have no idea, whether this bug is in the package or in the upstream > library. If it concerns upstream, I would be very glad if you forwarded > it and set me to CC. There is only one tiny patch to gmp in this version: to disable one bit of assembly in arm/thumb; c.f. #742814. So this issue is either an upstream bug or a usage problem. I can't tell which, so I suggest you contact upstream with all the required information https://gmplib.org/#BUGREPORTS One of the items required will be a complete self-contained program, which you almost provided. Regards, -Steve signature.asc Description: Digital signature -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: Bug#742814: please address the issue, don't work around it (assembly not ready for ARM Thumb)
On April 6, 2014 12:12:29 PM Matthias Klose wrote: > Control: reopen -1 > Control: severity -1 important > Control: tags -1 + help > > you applied a work around, but didn't fix the issue. Please keep the issue > open until it is addressed. I fixed the build failure with a patch from upstream, so #742814 is indeed closed. There is no upstream support for Thumb assembly. You already reported this in #649740 and that issue remains open with a request for help from upstream: This looks incomplete, and is not documented. I will not apply a patch in such a state, sorry. Please do follow-up with gmp-devel mailing list. Regards, -Steve signature.asc Description: This is a digitally signed message part. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#743177: libvtk6 should conflicts with libvtk5.8
On April 1, 2014 09:12:24 AM Anton Gladky wrote: > 2014-03-31 10:58 GMT+02:00 Mathieu Malaterre : > > Typical scenarios that should not happen is an app linked against > > vtkCommon and vtkCommonCore. This gets even worst with python > > > > $ python > > import vtkCommon > > import vtkCommonCore > > We can declare as conflicting python-vtk and python-vtk6. > IMHO we get a lot of troubles, declaring libvtk5.8 and libvtk6 as > conflicting. I agree with the last statement. Now I'm just curious about the original motivation for the bug. Mathieu: did you experience some trouble? -Steve signature.asc Description: This is a digitally signed message part. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#743177: libvtk6 should conflicts with libvtk5.8
On April 1, 2014 08:59:13 AM you wrote: > As explained in details libs have different SONAME (vtkCommon != > vtkCommonCore) however they provide the same symbols (up to the ABI > diff). This is bad (tm) ! Sorry, what details are you referring to? -Steve signature.asc Description: This is a digitally signed message part. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: Bug#743177: libvtk6 should conflicts with libvtk5.8
On March 31, 2014 10:58:28 AM Mathieu Malaterre wrote: > Package: libvtk6 > > Clearly there is something missing here. libvtk6 can be co-installed > with libvtk5.8. VTK API (ABI too) is completely incompatible in > between those two versions. Clearly I'm missing something, because it is routine to have different-SONAME versions of a library co-installable. That is largely the point of having the SOVERSION in the package name. > Typical scenarios that should not happen is an app linked against > vtkCommon and vtkCommonCore. These have the SOVERSION correctly set in the library, don't they? The 5.8 libraries do steve@riemann{~}objdump -p /usr/lib/libvtkCommon.so.5.8.0|grep SON SONAME libvtkCommon.so.5.8 and while I don't have 6.0 installed, the list of files shows the library names all end with ".so.6.0". Any application will contain within it a list of the SONAMES required, so there is no confusion if both libvtkCommon.so.5.8 and libvtkCommon.so.6.0 are present on the system. > This gets even worst with python > > $ python > import vtkCommon > import vtkCommonCore Well, this is a problem in that the python scripts don't or can't declare which version of VTK API they conform to. I presume the trouble is that "import vtkCommon" brings in a different API on 5.8 v.s. 6.0. If so, that is a still a problem even if the two packages conflict: I may write a script for the 5.8 API, then upgrade to VTK 6 (removing VTK 5.8) and the script is broken. -Steve signature.asc Description: This is a digitally signed message part. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Re: Boost needs help
On March 12, 2014 01:56:26 PM Jose Luis Rivero wrote: > New boost release version (-5) was uploaded fixing the bug 739904 according > to the changelog[1]. Yes. Strangely sometime after I sent the "help boost" message to the mailing list, my originally-rejected upload got published. I appreciate that. However; no-one contacted me to say what changed, so I expect the next upload will face similar issues and the request for help still stands. -Steve > > [1] > http://metadata.ftp-master.debian.org/changelogs//main/b/boost1.54/boost1.54 > _1.54.0-5_changelog > > > On Wed, Mar 5, 2014 at 10:20 AM, Leopold Palomo-Avellaneda > wrote: > > > > A Dimecres, 5 de març de 2014, Steve M. Robbins va escriure: > > > On March 3, 2014 09:22:01 AM Leopold Palomo-Avellaneda wrote: > > > > > [1] https://svn.boost.org/trac/boost/ticket/8731 > > > > > [2] https://svn.boost.org/trac/boost/changeset/84950 > > > > > [3] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=739904 > > > > > [4] https://bugs.gentoo.org/show_bug.cgi?id=482372 > > > > > > > > Thanks Jose, > > > > > > > > so, when the new package of boost were upload, then we can try to > > > > build > > > > again and see if it works... I hope so. > > > > > > The fix for this bug has been made and uploaded. > > > > > > Unfortunately, the upload was rejected for unrelated bugs. Apparently > > > > they > > > > > are "serious" bugs but not the kind I am not motivated to fix. So > > > > patches > > for > > > > > #735339 and #735353 would be welcome. Please work against > > > svn.debian.org/svn/pkg-boost/boost/branches/1.54.0 > > > > Hi, > > > > I don't know if I'm surprised, thinking if it's Aprils fools or what. > > Simply I > > don't understand the situation. Anyway, looking the bugs: > > > > 735339:Non free w3m valid icons > > > > I think that it could be several solutions. One is repack the source > > without > > that file. I don't know how to send a patch for this. It's a NMU. Maybe, > > we > > can change the icon, but ... > > > > If it's just to change the icon, I can borrow the equivalent icons from > > piuparts and change it. > > > > And the last is create a libboost-nonfree with all this stuff. > > > > > > 735353: Sourceless file > > > > I have no idea about javascript. Looking the files the are scripts, some > > firstly I don't understand the bug. However, I imagine that this "strange > > files" come from some sources, and the file provided is just the exit from > > another script. > > > > I don't know sufficiently the policies but maybe it could be sufficient > > do: > > or put a note in the README with the two links from where download the > > sources, > > or include the two sources in some place of the package. > > > > > > Regards, > > > > Leopold > > > > > > > > -- > > -- > > Linux User 152692 > > Catalonia signature.asc Description: This is a digitally signed message part. -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers