Bug#857713: Please clarify license of Copyright Los Alamos National Security, LLC files [ftpmas...@ftp-master.debian.org: librandom123_1.09-1_amd64.changes REJECTED]
Hi John, thanks a lot for the quick and helpful clarification Andreas. On Thu, Mar 16, 2017 at 04:59:03PM -0400, John Salmon wrote: > Those two files were contributed to us by scientists at LANL. It is > our understanding that their intention was to share them with the > community. > > However, if you feel the LANL copyright does not meet your needs, > then you're welcome to redistribute Random123 without those files. > The inclusion of those files is only triggered by the 'xlc' and 'pgcc' > compilers, > neither of which is part of a Debian distribution. > > John Salmon > > On 03/16/2017 03:58 PM, Andreas Tille wrote: > >Hi, > > > >as wrote in my last mail I intend to package Random123 for Debian. > >Before any software can be included into Debian a thorough check of > >licenses is done by our ftpmaster team. One of them has found issues > >with two files. Could you please clarify the permission for using and > >disrtibuting these files? > > > >Kind regards > > > > Andreas. > > > >- Forwarded message from Thorsten Alteholz > > - > > > >Date: Thu, 16 Mar 2017 19:00:11 + > >From: Thorsten Alteholz > >To: Debian Med Packaging Team > >, Andreas Tille > > > >Subject: librandom123_1.09-1_amd64.changes REJECTED > > > > > >Hi Andreas, > > > >the file headers of: > > Random123-1.09/include/Random123/features/pgccfeatures.h > > Random123-1.09/include/Random123/features/xlcfeatures.h > >say: > > > >Copyright (c) 2013, Los Alamos National Security, LLC > >All rights reserved. > > > >"(...)The U.S. Government has rights to use, reproduce, and distribute > >this software.(...)" > > > >But what about my rights? > > > > Thorsten > > > > > > > > > > > >=== > > > >Please feel free to respond to this email if you don't understand why > >your files were rejected, or if you upload new files which address our > >concerns. > > > > > >___ > >Debian-med-packaging mailing list > >debian-med-packag...@lists.alioth.debian.org > >http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-packaging > > > > > >- End forwarded message - > > > > -- > *.* -- http://fam-tille.de
Bug#858015: ITP: gst-omx -- GStreamer OpenMax plugins
Package: wnpp Owner: "Ying-Chun Liu (PaulLiu)" Severity: wishlist * Package name: gst-omx Version : 1.10.4 Upstream Author : Sebastian Dröge * URL : https://gstreamer.freedesktop.org/modules/gst-omx.html * License : LGPL-2.1 Programming Lang: C Description : GStreamer OpenMax plugins This plugin wraps available OpenMAX IL components and makes them available as standard GStreamer elements. -- PaulLiu (劉穎駿) E-mail: Ying-Chun Liu (PaulLiu) signature.asc Description: OpenPGP digital signature
Bug#858015: ITP: gst-omx -- GStreamer OpenMax plugins
On Fri, 17 Mar 2017 18:42:37 +0800 "Ying-Chun Liu (PaulLiu)" wrote: > Package: wnpp > Owner: "Ying-Chun Liu (PaulLiu)" > Severity: wishlist > > * Package name: gst-omx > Version : 1.10.4 > Upstream Author : Sebastian Dröge > * URL : https://gstreamer.freedesktop.org/modules/gst-omx.html > * License : LGPL-2.1 > Programming Lang: C > Description : GStreamer OpenMax plugins > This plugin wraps available OpenMAX IL components and makes > them available as standard GStreamer elements. Hi, Thanks for considering to package gst-omx, but on a generic Debian system this will never work out of the box (you need a hardware specific configuration file) and depending on the target embedded device you will have to compile it specifically for that device. How did you plan on packaging gst-omx? Sebastian signature.asc Description: This is a digitally signed message part
Bug#858026: ITP: libbloom -- simple and small bloom filter implementation in C
Package: wnpp Severity: wishlist Owner: Roger Shimizu * Package name: libbloom Version : 1.4 Upstream Author : Jyri J. Virkki * URL : https://github.com/jvirkki/libbloom * License : BSD-2-Clause Programming Lang: C Description : simple and small bloom filter implementation in C It implements bloom filters: http://en.wikipedia.org/wiki/Bloom_filter . This package provides shared library. PS. It's a new dependency of my package shadowsocks-libev, since version 3.0.3
Bug#858015: ITP: gst-omx -- GStreamer OpenMax plugins
On 2017年03月17日 20:47, Sebastian Dröge wrote: > On Fri, 17 Mar 2017 18:42:37 +0800 "Ying-Chun Liu (PaulLiu)" > wrote: >> Package: wnpp >> Owner: "Ying-Chun Liu (PaulLiu)" >> Severity: wishlist >> >> * Package name: gst-omx >>Version : 1.10.4 >>Upstream Author : Sebastian Dröge >> * URL : https://gstreamer.freedesktop.org/modules/gst-omx.html >> * License : LGPL-2.1 >>Programming Lang: C >>Description : GStreamer OpenMax plugins >> This plugin wraps available OpenMAX IL components and makes >> them available as standard GStreamer elements. > > Hi, > > Thanks for considering to package gst-omx, but on a generic Debian > system this will never work out of the box (you need a hardware > specific configuration file) and depending on the target embedded > device you will have to compile it specifically for that device. > > How did you plan on packaging gst-omx? > > > Sebastian > Hi Sebastian, Sorry forgot to mention my plan. Currently we have some libomxil-bellago* in Debian. I plan to package gst-omx by using update-alternatives on libgstomx.so and /etc/xdg/gstomx.conf on different configs. So my plan is to have the following binary packages: * gstreamer1.0-omx-generic: contains libgstomx-generic.so (build with generic target) and with the lowest priority for libgstomx.so * gstreamer1.0-omx-generic-bin: usr/bin/listcomponents (I think we don't need to alternate this right? as it only reads the component names of openmax IL). * gstreamer1.0-omx-generic-config: contains /etc/xdg/gstomx-generic.conf which is an empty config and provides /etc/xdg/gstomx.conf with lowest priority. * gstreamer1.0-omx-bellagio: contains libgstomx-bellagio.so (build with bellagoi target) and with the mid priority for libgstomx.so. This package will be set priority: extra. * gstreamer1.0-omx-bellagio-config: contains /etc/xdg/gstomx-bellagio.conf modify with current Debian libomxil-bellagio path. And provides /etc/xdg/gstomx.conf with mid priority. This package will be set priority: extra. Do you think this is good? I tried to build RPi but it needs to Build-Depends on proprietary headers so I'm not going to build it. For RPi they can use update-alternatives to override libgstomx.so. Please give me more comments if this is possible. Thank you very much. Yours, Paul -- PaulLiu (劉穎駿) E-mail: Ying-Chun Liu (PaulLiu) signature.asc Description: OpenPGP digital signature
Bug#857713: marked as done (ITP: librandom123 -- parallel random numbers library)
Your message dated Fri, 17 Mar 2017 14:00:12 + with message-id and subject line Bug#857713: fixed in librandom123 1.09+dfsg-1 has caused the Debian Bug report #857713, regarding ITP: librandom123 -- parallel random numbers library to be marked as done. This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 857713: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857713 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems --- Begin Message --- Package: wnpp Severity: wishlist Owner: Andreas Tille * Package name: librandom123 Version : 1.09 Upstream Author : John K. Salmon and Mark A. Moraes and Ron O. Dror and David E. Shaw * URL : http://www.deshawresearch.com/resources_random123.html * License : BSD Programming Lang: C Description : parallel random numbers library Random123 is a family of highly parallelizable counter-based random number generators (CBRNGs) that are useful for a wide range of applications. . Random123 is a library of "counter-based" random number generators (CBRNGs), in which the Nth random number can be obtained by applying a stateless mixing function to N instead of the conventional approach of using N iterations of a stateful transformation. CBRNGs are ideal for a wide range of applications on modern multi-core CPUs, GPUs, clusters, and special-purpose hardware. Three families of non-cryptographic CBRNGs are described in a paper presented at the SC11 conference: ARS (based on the Advanced Encryption System (AES)), Threefry (based on the Threefish encryption function), and Philox (based on integer multiplication). They all satisfy rigorous statistical testing (passing BigCrush in TestU01), vectorize and parallelize well (each generator can produce at least 264 independent streams), have long periods (the period of each stream is at least 2128), require little or no memory or state, and have excellent performance (a few clock cycles per byte of random output). The Random123 library can be used with CPU (C and C++) and GPU (CUDA and OpenCL) applications. Remark: This library is used in a target of Debian Med (exabayes[1]) and thus I intend to maintain it inside the Debian Med team even if the scope is science in general. In case somebody else intends to serve as an additional uploader and prefers Debian Science team I'd be fine to move the packaging from current https://anonscm.debian.org/git/debian-med/librandom123.git to Debian Science git. [1] http://sco.h-its.org/exelixis/web/software/exabayes/ --- End Message --- --- Begin Message --- Source: librandom123 Source-Version: 1.09+dfsg-1 We believe that the bug you reported is fixed in the latest version of librandom123, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 857...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille (supplier of updated librandom123 package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 14 Mar 2017 09:55:13 +0100 Source: librandom123 Binary: librandom123-dev librandom123-doc Architecture: source all Version: 1.09+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: librandom123-dev - parallel random numbers library librandom123-doc - documentation and examples of parallel random numbers library Closes: 857713 Changes: librandom123 (1.09+dfsg-1) unstable; urgency=medium . * Initial release (Closes: #857713) Checksums-Sha1: 2d7f9d00be11839f5865591aba1d20acd1ac846f 2075 librandom123_1.09+dfsg-1.dsc 73c69c8d4e241a2fcd085a376c8f9177d60cba46 362492 librandom123_1.09+dfsg.orig.tar.xz 18277dd689639942958b5bdbbbd74a24a69f6728 3880 librandom123_1.09+dfsg-1.debian.tar.xz 6e1b98c720f99f343a90b5daf9b0bb05944d7717 31288 librandom123-dev_1.09+dfsg-1_all.deb 76048a5207b2a9b249b9f128585ced065893de14 420240 librandom123-doc_1.09+dfsg-1_all.deb b69ab799515979475673764b4972e005abb8e6e7 4926 librandom123_1.09+dfsg-1_amd64.buildinfo Checksums-Sha256: 28cd892a4efe7199b8e661f6ea9fe72d069f8371836617b7bd9068e9a0210d51 2075 librandom123_1.09+dfsg-1.dsc d1faf010a48649c22cdc66c2992804a9274a3b8f38198
Bug#857813: marked as done (ITP: python-dbfread -- read DBF Files with Python)
Your message dated Fri, 17 Mar 2017 14:00:13 + with message-id and subject line Bug#857813: fixed in python-dbfread 2.0.7-1 has caused the Debian Bug report #857813, regarding ITP: python-dbfread -- read DBF Files with Python to be marked as done. This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 857813: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857813 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems --- Begin Message --- Package: wnpp Severity: wishlist Owner: Ghislain Antony Vaillant * Package name: python-dbfread Version : 2.0.7 Upstream Author : Ole Martin Bjorndalen * URL : https://dbfread.readthedocs.io/ * License : Expat Programming Lang: Python Description : read DBF Files with Python Long-Description: DBF is a file format used by databases such dBase, Visual FoxPro, and FoxBase+. This library reads DBF files and returns the data as native Python data types for further processing. It is primarily intended for batch jobs and one-off scripts. This package is a dependency to src:python-agate-dbf (itself necessary for csvkit. It will be maintained by the Debian Python Modules Team. Cheers, Ghis --- End Message --- --- Begin Message --- Source: python-dbfread Source-Version: 2.0.7-1 We believe that the bug you reported is fixed in the latest version of python-dbfread, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 857...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Ghislain Antony Vaillant (supplier of updated python-dbfread package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 15 Mar 2017 18:48:15 + Source: python-dbfread Binary: python3-dbfread python-dbfread-doc Architecture: source all Version: 2.0.7-1 Distribution: unstable Urgency: low Maintainer: Debian Python Modules Team Changed-By: Ghislain Antony Vaillant Description: python-dbfread-doc - documentation for dbfread python3-dbfread - read DBF Files with Python Closes: 857813 Changes: python-dbfread (2.0.7-1) unstable; urgency=low . * Initial release. (Closes: #857813) Checksums-Sha1: 08e2a544153d1cce4ea270a5283503eaf67d62ee 2293 python-dbfread_2.0.7-1.dsc 8b53c4b81ae3165fadf050119c6d947cf9b5362b 33212 python-dbfread_2.0.7.orig.tar.gz ed85706cacdd01cff23571e04c11ca820bd8d6ef 2684 python-dbfread_2.0.7-1.debian.tar.xz ed31b7cf3ef2bb64402a244cc23c878aae3ef3ae 39490 python-dbfread-doc_2.0.7-1_all.deb 0dbd8f958a4a0a4f5d313aa8b44d78c406709435 6065 python-dbfread_2.0.7-1_amd64.buildinfo 9e272f7436f9ea02276e9872dab6d2aacffaca37 17422 python3-dbfread_2.0.7-1_all.deb Checksums-Sha256: a6eb50866867b95b9f80d80b6abd79197b8d4b6892e6a1880c15044521f0a9d9 2293 python-dbfread_2.0.7-1.dsc 07c8a9af06ffad3f6f03e8fe91ad7d2733e31a26d2b72c4dd4cfbae07ee3b73d 33212 python-dbfread_2.0.7.orig.tar.gz 87f3054da56fe50e610908cf3d9ec8b62f45a121a382c8236d266dae8aa75b08 2684 python-dbfread_2.0.7-1.debian.tar.xz e313b12ade6176ed222e216ed1151972e652f1811f830dab54029d5e1ed68983 39490 python-dbfread-doc_2.0.7-1_all.deb f5adb431625d7f61d257d02877adda66e0f66f1b0e619e67729d3914861d8ba4 6065 python-dbfread_2.0.7-1_amd64.buildinfo 2b537bdd322162a1784eff6b2675ee785dc528a23ec7446dc9376e388058dbf2 17422 python3-dbfread_2.0.7-1_all.deb Files: 45c3e68739207cb984eb56d3dd7fb967 2293 python optional python-dbfread_2.0.7-1.dsc 44963a81f213d406ecb35d8f887c702d 33212 python optional python-dbfread_2.0.7.orig.tar.gz e20f4d91ddb3df97750815dbf443a822 2684 python optional python-dbfread_2.0.7-1.debian.tar.xz 7f6d5d71f282a875265ba9c414e1b182 39490 doc optional python-dbfread-doc_2.0.7-1_all.deb c42754382bd9613bb23f598d7a58ae27 6065 python optional python-dbfread_2.0.7-1_amd64.buildinfo b41b392a6f0a948156a345ab820afe18 17422 python optional python3-dbfread_2.0.7-1_all.deb -BEGIN PGP SIGNATURE- Version: GnuPG v1 iQIcBAEBCAAGBQJYyq9XAAoJEFeKBJTRxkbR8acQAIJIfVbMYc6Wamy5H/DFncNV Igs3vcNjvoJIgArJKRg8+7PHzJMHqAjKqTZyqky41I6tSfvsnxCXYFJ1QF4nlzUt 50akTk/0eTzvhL4SNcJ4upGeYP5qnjzNLGkio+eXThpRmGpAjcjW9N3SnS/f5+sI F7dJLa6XRBHYXdrvgYhNOcpfz0N6rZEkrzvPuhLq5Zu7Iwa4AkKw2XlbXGS6v4wE v+8KlmgKNQZcsVvab/b1n00gvX1tTlTH9sAC/mJCalMmvg
Bug#857388: marked as done (ITP: python-leather -- charting library for Python)
Your message dated Fri, 17 Mar 2017 14:00:13 + with message-id and subject line Bug#857388: fixed in python-leather 0.3.3-1 has caused the Debian Bug report #857388, regarding ITP: python-leather -- charting library for Python to be marked as done. This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 857388: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=857388 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems --- Begin Message --- Package: wnpp Severity: wishlist Owner: Ghislain Antony Vaillant * Package name: python-leather Version : 0.3.3 Upstream Author : Christopher Groskopf * URL : http://leather.readthedocs.org/ * License : Expat Programming Lang: Python Description : charting library for Python This package is a build dependency for src:python-agate. It will be maintained by the DPMT alongside the latter. Cheers, Ghis --- End Message --- --- Begin Message --- Source: python-leather Source-Version: 0.3.3-1 We believe that the bug you reported is fixed in the latest version of python-leather, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 857...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Ghislain Antony Vaillant (supplier of updated python-leather package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 16 Mar 2017 15:59:53 + Source: python-leather Binary: python3-leather python-leather-doc Architecture: source all Version: 0.3.3-1 Distribution: unstable Urgency: low Maintainer: Debian Python Modules Team Changed-By: Ghislain Antony Vaillant Description: python-leather-doc - documentation for leather python3-leather - charting library for Python Closes: 857388 Changes: python-leather (0.3.3-1) unstable; urgency=low . * Initial release. (Closes: #857388) Checksums-Sha1: 07edeb7849cd832dec092c75e867eddb2b6236ee 2462 python-leather_0.3.3-1.dsc b432acb75165fc67b84e03687f2fea6d185c0730 40522 python-leather_0.3.3.orig.tar.gz 15d8e77310a90d5e5302a837bfccde81a50cf256 3512 python-leather_0.3.3-1.debian.tar.xz 1f44a623a181ca97fac9ab3883e099d14adc02e9 47000 python-leather-doc_0.3.3-1_all.deb bed66cf9a3744c1bdaec37aa6d8bd005571a3c1c 7043 python-leather_0.3.3-1_amd64.buildinfo d837d3b3fa5255a06aa5f3f87feaa4d7ed32e419 19034 python3-leather_0.3.3-1_all.deb Checksums-Sha256: 99e417113d6fdb159ac3f13276726fd6da2cebe646099ccaa4774626ff300d48 2462 python-leather_0.3.3-1.dsc 70f621f7c5ddac6bc3261850134c0187cb200844243eb878a29f8a8f15a8db46 40522 python-leather_0.3.3.orig.tar.gz 1641823bb55874d44ea63154e607be1a4d4a748217968f70b466934ff723ab05 3512 python-leather_0.3.3-1.debian.tar.xz d4d86e14152c3e43d5ae3e23fdbb96a81aade1de29fedabca8baae6cfd81a052 47000 python-leather-doc_0.3.3-1_all.deb 7c667f175b14b837a3a794458b17ab0a1a419a012d44e24a18956cf34b373d8d 7043 python-leather_0.3.3-1_amd64.buildinfo b53fe75d3cac196b54677d27314ff6cbe8e285de291b01c320611d03764ee22d 19034 python3-leather_0.3.3-1_all.deb Files: 21568b75f82e8e5f7336650b907fb354 2462 python optional python-leather_0.3.3-1.dsc 459474a69ecb998b300bebe93942d17a 40522 python optional python-leather_0.3.3.orig.tar.gz f1e2c4446574e25036138ae9ca447136 3512 python optional python-leather_0.3.3-1.debian.tar.xz b4559570ab90fd9ed2284ee6efa332d9 47000 doc optional python-leather-doc_0.3.3-1_all.deb 2df37c66c03bf4902ff1b4b2aa4263d6 7043 python optional python-leather_0.3.3-1_amd64.buildinfo 30a2b2c32a0a81117c2076324ce8d035 19034 python optional python3-leather_0.3.3-1_all.deb -BEGIN PGP SIGNATURE- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAljLrM4RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHjiw/+KvGrTBOVWXsmIKThEcG7p1edsdFi5/Lj +dsYaS61v1nzGH51uQjQs2P9FY+pv7sdzaDD0MMfR3VDj6P2vxpDzxJLfA/LBU6Q 6hemeM2wJaj+szd8iTTWYiq+UKlg/f7aR4m2uXf7/ayn7hfXWWIJeYvWkvzPndYN 1PvRVGwcCKe7E+dClJdukToAmYtlmAJGnxm5x32OESefGzvB2YipRa3VDncZ1lgL Xx4DhKnlsjqV75jxgOSZS/vKk7VCOwMUQFYn6uG/pzBEeKN5z91x+9DS0/wuKMsC 9NWtvC1MEFUOaNmmDqWKSvhixNBbI7mtNRwj9FbLGGMdG6fjRMTgbfCh1vRRBcWq ZqHVImXsgr7nCWtbPros5I/b5qTwsWQVSh1RE84iAQTBCKxVYOpVUu/rE2EMQ0gZ DAoMxiyWMs++zjraecES7oXjPhEL2qNXocvl9z1hLQmi0VYKer2U6OvaAAX6jpmu 0YEpryA57cf8TWmbtT9TQAqSCO082
Bug#851306: marked as done (ITP: freebayes -- Bayesian haplotype-based polymorphism discovery and genotyping)
Your message dated Fri, 17 Mar 2017 14:00:12 + with message-id and subject line Bug#851306: fixed in freebayes 1.0.2-1 has caused the Debian Bug report #851306, regarding ITP: freebayes -- Bayesian haplotype-based polymorphism discovery and genotyping to be marked as done. This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 851306: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=851306 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems --- Begin Message --- Package: wnpp Severity: wishlist Owner: Andreas Tille * Package name: freebayes Version : 1.0.2 Upstream Author : Erik Garrison * URL : https://github.com/ekg/freebayes * License : MIT Programming Lang: C++ Description : Bayesian haplotype-based polymorphism discovery and genotyping FreeBayes is a Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment. Remark: This package is maintained by the Debian Med team at https://anonscm.debian.org/git/debian-med/freebayes.git --- End Message --- --- Begin Message --- Source: freebayes Source-Version: 1.0.2-1 We believe that the bug you reported is fixed in the latest version of freebayes, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 851...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille (supplier of updated freebayes package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 08 Nov 2016 11:40:28 +0100 Source: freebayes Binary: freebayes Architecture: source amd64 Version: 1.0.2-1 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: freebayes - Bayesian haplotype-based polymorphism discovery and genotyping Closes: 851306 Changes: freebayes (1.0.2-1) unstable; urgency=low . * Initial packaging (Closes: #851306) Checksums-Sha1: 0ccec51827227c1ef997dd74237e0b53dd3cfa1a 2055 freebayes_1.0.2-1.dsc f43aec0074b72cd5ef32decf3dd4490493c0da9c 2343751 freebayes_1.0.2.orig.tar.gz ecee973c0bc7e5d1fd59bbbdf6c74eca42e8188a 19920 freebayes_1.0.2-1.debian.tar.xz 86c309619810aa39b6c95b3ea7001f5e444b059e 4953530 freebayes-dbgsym_1.0.2-1_amd64.deb 97db1ff5e383413a07a8b33aaf0e34db668eb19d 6386 freebayes_1.0.2-1_amd64.buildinfo 039303dc2b1dec07151a2d59a0f25b0acca18cdc 860092 freebayes_1.0.2-1_amd64.deb Checksums-Sha256: 911dbbdb5eaa72aeafafe71c5194645a516c9dce6f502d39d9519f1b58531e55 2055 freebayes_1.0.2-1.dsc f47544702d36f1b388ed0a7c3950af3750f966656b7e2b884c8090643b58c2d2 2343751 freebayes_1.0.2.orig.tar.gz c0789997b0c1586698f6854f4d79fb02c7623ccb954d428f06a6bf480bf9253a 19920 freebayes_1.0.2-1.debian.tar.xz e4f05a02d41fee706fecb76018b2bc6115c06af420542e4cc87312f94b59bea9 4953530 freebayes-dbgsym_1.0.2-1_amd64.deb 7ee888cc5a1c196b7b5fd38bd5eb9a981abda416068110f57e65b027aec565cc 6386 freebayes_1.0.2-1_amd64.buildinfo 1b09e3bf581720e2160e9ea9a779ed7067ff89753a520897ee8dbb6c7151e179 860092 freebayes_1.0.2-1_amd64.deb Files: d5ffe5fd2958b456593555a1934bdeac 2055 science optional freebayes_1.0.2-1.dsc cacdbc2f9e927568c7c144f0e8acb975 2343751 science optional freebayes_1.0.2.orig.tar.gz a73698a756ef1ad8ef2834198213c1dd 19920 science optional freebayes_1.0.2-1.debian.tar.xz 3644d50a332076c8d8e6f55f80e0be01 4953530 debug extra freebayes-dbgsym_1.0.2-1_amd64.deb 406b972b91a82ae79ad76671dac15c78 6386 science optional freebayes_1.0.2-1_amd64.buildinfo 0e1446cb1afd5218c35ef8bbf277b48c 860092 science optional freebayes_1.0.2-1_amd64.deb -BEGIN PGP SIGNATURE- Version: GnuPG v1 iQIcBAEBCAAGBQJYy9udAAoJEFeKBJTRxkbR3GMP/RXXTt3LLjS6fNJLE7kn6fQ5 ERA4A4Vd6oJdAVf0BMA5v8HtcLXPX42yRmvOHbfu5lkvRDEcXbOwJTpeqyDdCP6E CTzJxY/7FH3NmfhbaQr7wYbYionssUQfuSgilGKXGGVFJD3PgNn0uWV3XZ74HBvF V9/QoRhQjseqzjiVdsKDIe7cTYSwvdxkf7Xy/Upu3mfmo2u27sVVnEbXEJywoahb N9oh+3hdeEA9d1uja1hXyvwFiN9TaBaAP9p3+4O4flzAEZ/pPYlfDLhvHCtIk3Oy hhrEuaYi49j+CiHs6f7GRyFeWkndD92rT6XOnT
Bug#858015: ITP: gst-omx -- GStreamer OpenMax plugins
On Fri, 2017-03-17 at 21:58 +0800, Ying-Chun Liu (PaulLiu) wrote: > Sorry forgot to mention my plan. > Currently we have some libomxil-bellago* in Debian. > I plan to package gst-omx by using update-alternatives on > libgstomx.so and /etc/xdg/gstomx.conf on different configs. Bellagio is a rather useless OpenMAX implementation and for all the codecs it provides (which are software based), there are better native GStreamer plugins available. > So my plan is to have the following binary packages: > * gstreamer1.0-omx-generic: contains libgstomx-generic.so (build > with > generic target) and with the lowest priority for libgstomx.so > * gstreamer1.0-omx-generic-bin: usr/bin/listcomponents (I think we > don't need to alternate this right? as it only reads the component > names > of openmax IL). I wouldn't install that one, it's more a debugging tool and also probably should be renamed to gst-omx-listcomponents instead otherwise. Maybe put it into /usr/doc :) > * gstreamer1.0-omx-generic-config: contains > /etc/xdg/gstomx-generic.conf which is an empty config and provides > /etc/xdg/gstomx.conf with lowest priority. > * gstreamer1.0-omx-bellagio: contains libgstomx-bellagio.so (build > with > bellagoi target) and with the mid priority for libgstomx.so. This > package will be set priority: extra. > * gstreamer1.0-omx-bellagio-config: contains > /etc/xdg/gstomx-bellagio.conf modify with current Debian > libomxil-bellagio path. And provides /etc/xdg/gstomx.conf with mid > priority. This package will be set priority: extra. > > Do you think this is good? > I tried to build RPi but it needs to Build-Depends on proprietary > headers so I'm not going to build it. > > For RPi they can use update-alternatives to override libgstomx.so. > > Please give me more comments if this is possible. Thank you very > much. Generally this approach seems sensible. You make a generic package and then have update-alternatives for selecting between the different ones. The main problem here is that on a generic system you don't have any useful OpenMAX IL implementation. Bellagio is not useful. So only specific variants for different hardware devices would seem useful. I guess on ARM you could make a generic build, for many OpenMAX IL implementations only a configuration file is needed and not a custom build. Hope this helps somehow :) I'm not sure what the best to do here is, that's why I didn't consider packaging it myself. IMHO that's the job of whoever does the distribution for a specific piece of hardware. Sebastian signature.asc Description: This is a digitally signed message part
Bug#858033: ITP: golang-honnef-go-augeas -- TODO
Package: wnpp Severity: wishlist Owner: Hilko Bengen * Package name: golang-honnef-go-augeas Version : 0.0~git20161110.0.ca62e35-1 Upstream Author : Dominik Honnef * URL : https://honnef.co/go-augeas * License : MIT Programming Lang: Go Description : Go bindings for Augeas This package provides Go bindings for the Augeas configuration editing tool
Bug#858044: ITP: dsync -- A distributed sync package.
Package: wnpp Severity: wishlist Owner: Henti Smith X-Debbugs-CC: debian-de...@lists.debian.org, pkg-go-maintain...@lists.alioth.debian.org * Package name: dsync Version : 0.0~git20170209.0.b9f7da7-1 Upstream Author : Minio Cloud Storage * URL : https://github.com/minio/dsync * License : Apache-2.0 Programming Lang: Go Description : A distributed sync package. dsync Slack (https://slack.minio.io) Go Report Card A distributed locking and syncing package for Go. Introduction dsync is a package for doing distributed locks over a network of n nodes. It is designed with simplicity in mind and hence offers limited scalability (n <= 16). Each node will be connected to all other nodes and lock requests from any node will be broadcast to all connected nodes. A node will succeed in getting the lock if n/2 + 1 nodes (whether or not including itself) respond positively. If the lock is acquired it can be held for as long as the client desires and needs to be released afterwards. This will cause the release to be broadcast to all nodes after which the lock becomes available again. Motivation This package was developed for the distributed server version of Minio Object Storage (https://minio.io/). For this we needed a distributed locking mechanism for up to 16 servers that each would be running minio server. The locking mechanism itself should be a reader/writer mutual exclusion lock meaning that it can be held by a single writer or an arbitrary number of readers. -- --
Bug#858061: ITP: python-xopen -- Python module to open compressed files transparently
Package: wnpp Severity: wishlist Owner: Andreas Tille * Package name: python-xopen Version : 0.1.1 Upstream Author : Marcel Martin * URL : https://github.com/marcelm/xopen * License : MIT Programming Lang: Python Description : Python module to open compressed files transparently This small Python module provides a xopen function that works like the built-in open function, but can also deal with compressed files. Supported compression formats are gzip, bzip2 and xz. They are automatically recognized by their file extensions .gz, .bz2 or .xz. . The focus is on being as efficient as possible on all supported Python versions. For example, simply using gzip.open is slow in older Pythons, and it is a lot faster to use a gzip subprocess. . This module has originally been developed as part of the cutadapt tool that is used in bioinformatics to manipulate sequencing data. It has been in successful use within that software for a few years. Remark: It turned out that this is a precondition for python-cutadapt vesion 1.12 as it is reported in bug #858053. To be able to fix the bug quickly and convince the release team to accept it into testing to fix a potential RC bug (reporter did not yet confirmed RC) it would help if it could be accepted quickly. The package will be maintained by the Debian Med team at https://anonscm.debian.org/git/debian-med/python-xopen.git
Bug#858067: ITP: xtensor -- multi-dimensional arrays with broadcasting and lazy computing
Package: wnpp Severity: wishlist Owner: Ghislain Antony Vaillant * Package name: xtensor Version : 0.7.1 Upstream Author : Johan Mabille and Sylvain Corlay * URL : http://quantstack.net/xtensor * License : BSD Programming Lang: C++ Description : multi-dimensional arrays with broadcasting and lazy computing This package will be maintained by the Debian Science Team. It is a dependency to xtensor-python.
Bug#858068: ITP: xtensor-python -- Python bindings for the xtensor library
Package: wnpp Severity: wishlist Owner: Ghislain Antony Vaillant * Package name: xtensor-python Version : 0.6.0 Upstream Author : Johan Mabille and Sylvain Corlay * URL : http://quantstack.net/xtensor * License : BSD Programming Lang: C++ Description : Python bindings for the xtensor library This package will be maintained by the Debian Science Team alongside pybind11 which it complements.
Processed: retitle 835654 to ITA: net-snmp -- SNMP configuration script, MIBs and documentation, owner it !
Processing commands for cont...@bugs.debian.org: > retitle 835654 ITA: net-snmp -- SNMP configuration script, MIBs and > documentation, owner it ! Bug #835654 [wnpp] O: net-snmp -- SNMP configuration script, MIBs and documentation Changed Bug title to 'ITA: net-snmp -- SNMP configuration script, MIBs and documentation, owner it !' from 'O: net-snmp -- SNMP configuration script, MIBs and documentation'. > thanks Stopping processing here. Please contact me if you need assistance. -- 835654: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=835654 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
Processed: libbloom: block ITP 858026 by RFS 858083
Processing commands for cont...@bugs.debian.org: > block 858026 by 858083 Bug #858026 [wnpp] ITP: libbloom -- simple and small bloom filter implementation in C 858026 was not blocked by any bugs. 858026 was not blocking any bugs. Added blocking bug(s) of 858026: 858083 > stop Stopping processing here. Please contact me if you need assistance. -- 858026: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=858026 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
Processed: owner 835654, retitle 835654 to ITA: net-snmp -- SNMP configuration script, MIBs and documentation
Processing commands for cont...@bugs.debian.org: > owner 835654 ! Bug #835654 [wnpp] ITA: net-snmp -- SNMP configuration script, MIBs and documentation, owner it ! Owner recorded as Craig Small . > retitle 835654 ITA: net-snmp -- SNMP configuration script, MIBs and > documentation Bug #835654 [wnpp] ITA: net-snmp -- SNMP configuration script, MIBs and documentation, owner it ! Changed Bug title to 'ITA: net-snmp -- SNMP configuration script, MIBs and documentation' from 'ITA: net-snmp -- SNMP configuration script, MIBs and documentation, owner it !'. > thanks Stopping processing here. Please contact me if you need assistance. -- 835654: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=835654 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
Bug#858087: RFP: stenc -- SCSI Tape Encryption Manager
Package: wnpp Severity: wishlist * Package name: stenc Version : 1.0.7 Upstream Author : John Coleman * URL : https://sourceforge.net/projects/stenc/ * License : GPLv2 Programming Lang: C++ Description : SCSI Tape Encryption Manager Stenc manages encryption on capabale LTO tape drives with hardware-based encryption. Program should work on any other SSP capable tape drives. Built specifically for Linux and AIX. Now supports key change auditing and key descriptors (uKAD).
