RE: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL]
I still cannot get it to load the AggregatePlainTextFastUMLSProcessor, but I have a question - the umls support says that the end point to validate the user is not a valid api, then how is it working for others? Are you all changing the umlsaddress in the dictionary xml? Ritika -Original Message- From: Dligach, Dmitriy Sent: Friday, July 20, 2018 1:18 AM To: cTAKES Developer list Subject: Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] Hi Ritika, We had similar issues back in February (you can search the email archive). I was under impression that this happened when multiple instances of cTAKES were run on the same machine under different user names. A couple of times we were able to fix this problem by cleaning out a bunch of files from /tmp (such as conn.xml), but that “fix” stopped working at some problem. We weren’t able to determine the root cause of this problem... Ultimately, we replaced CentOS with Ubuntu on that machine and the problem went away for good. Best, Dima On Jul 19, 2018, at 06:09, Finan, Sean mailto:sean.fi...@childrens.harvard.edu>> wrote: Hi Ritika, I am glad that adding your proxy information got you one step closer to a working configuration. However, I cannot say why your password isn't being properly validated. If you can reach the umls server and your credentials are correct then the umls server should reply positively and ctakes should let the pipeline continue. Does anybody else on the devlist have any ideas? Sean From: Jain, Ritika mailto:ritika.j...@philips.com>> Sent: Thursday, July 19, 2018 5:06 AM To: dev@ctakes.apache.org<mailto:dev@ctakes.apache.org> Subject: RE: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] I can get it working adding proxy parameters in the java command, now I do not get the connection timeout, but a different error that the user is not valid. If you follow the email chain below, the support person from UMLS says that my user is a valid user and the account user to validate the user is not for end point users. Can you help me with this? 14:29:06,054 DEBUG [DataBinder] DataBinder requires binding of required fields [] 14:29:06,060 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@39c6fd02] 14:29:06,067 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@39c6fd02] 14:29:06,072 INFO [Chunker] Chunker model file: org/apache/ctakes/chunker/models/chunker-model.zip 14:29:07,745 DEBUG [DataBinder] DataBinder requires binding of required fields [] 14:29:07,746 INFO [TokenizerAnnotatorPTB] Initializing org.apache.ctakes.core.ae.TokenizerAnnotatorPTB 14:29:07,756 DEBUG [DataBinder] DataBinder requires binding of required fields [] 14:29:07,770 INFO [ContextDependentTokenizerAnnotator] Finite state machines loaded. 14:29:07,778 DEBUG [DataBinder] DataBinder requires binding of required fields [] 14:29:07,779 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@725e7dcc] 14:29:07,782 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@725e7dcc] 14:29:07,785 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@725e7dcc] 14:29:07,792 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@725e7dcc] 14:29:07,854 DEBUG [StandardEnvironment] Initializing new StandardEnvironment 14:29:07,857 DEBUG [StandardEnvironment] Adding [systemProperties] PropertySource with lowest search precedence 14:29:07,858 DEBUG [StandardEnvironment] Adding [systemEnvironment] PropertySource with lowest search precedence 14:29:07,860 DEBUG [StandardEnvironment] Initialized StandardEnvironment with PropertySources [systemProperties,systemEnvironment] 14:29:07,864 DEBUG [StandardEnvironment] Initializing new StandardEnvironment 14:29:07,865 DEBUG [StandardEnvironment] Adding [systemProperties] PropertySource with lowest search precedence 14:29:07,867 DEBUG [StandardEnvironment] Adding [systemEnvironment] PropertySource with lowest search precedence 14:29:07,870 DEBUG [StandardEnvironment] Initialized StandardEnvironment with PropertySources [systemProperties,systemEnvironment] 14:29:07,873 DEBUG [StandardEnvironment] Initializing new StandardEnvironment 14:29:07,875 DEBUG [StandardEnvironment] Adding [systemProperties] PropertySource
RE: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL]
I have configured the password in both the places - xml and as environmental variable. Another thing to notice is that if I hit the API that ctakes is using to valiate the user using postman ( web debugger) I still get a false -- POST https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser BODY: licenseCode=NLM-3495749 user=ritikajain password=XX and I still a false. You can also try hitting the API with a vaild UMLS license with postman, and hopefully it should give a false Ritika -Original Message- From: Miller, Timothy Sent: Thursday, July 19, 2018 4:55 PM To: dev@ctakes.apache.org Subject: Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] Are you providing your password via the xml descriptor file or an environment variable? The only thing I can think of is that there might be some misformatting in the xml, like an extra trailing space/newline in the field where one of the username/password goes. Tim From: Jain, Ritika Sent: Thursday, July 19, 2018 7:15 AM To: dev@ctakes.apache.org Subject: RE: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] Hi Sean See this reply from UMLS support That endpoint (documented here: https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.proofpoint.com%2Fv2%2Furl%3Fu%3Dhttps-3A__emea01.safelinks.protection.outlook.com_-3Furl-3Dhttps-253A-252F-252Furldefense.proofpoint.com-252Fv2-252Furl-253Fu-253Dhttps-2D3A-5F-5Futs.nlm.nih.gov-5Fhelp-5Flicense-5Fvalidateumlsuserhelp.html-2526d-253DDwIFAg-2526c-253DqS4goWBT7poplM69zy-5F3xhKwEW14JZMSdioCoppxeFU-2526r-253Dfs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao-2526m-253DfQiwb4h2SxUTGfMyinBlOo9wdbQdJuM3zugwflzf1F8-2526s-253DuO0nsPPev-2DybnYKedCLy-5F4HwS1GZsf7u-2D8H5w2UOyek-2526e-26amp-3Bdata-3D02-257C01-257C-257C032497f07be34e9a6b3908d5ecd6787f-257C1a407a2d76754d178692b3ac285306e4-257C0-257C0-257C636675328259370278-26amp-3Bsdata-3DkRL2rxurzA6WxsuiSYm9zRwvVeaMAys3dXFcbR1y-252BZc-253D-26amp-3Breserved-3D0-3D%26d%3DDwIFAg%26c%3DqS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU%26r%3Dfs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao%26m%3DGqHa003bWO-wQ-O5I0ufpc_LJHggfChk83dWdrndMS4%26s%3D-bDdjhQcUbADrAh24ci4iuJtNAILeTUJ7wYnpPORBQU%26edata=02%7C01%7C%7C2cb58d890ef94c7aa76408d5ece0669d%7C1a407a2d76754d178692b3ac285306e4%7C0%7C0%7C636675370907437611sdata=MAlPCxcpI%2F5QX92datNpg%2BfZjSyb9IBRl%2FE7q9mevzw%3Dreserved=0= ) is not meant for end users, so it will not work with your license code and username. The ctakes CVD uses the same end point ( also, pointed out in the logs I shared). Regards, Ritika -Original Message- From: Finan, Sean Sent: Thursday, July 19, 2018 4:39 PM To: dev@ctakes.apache.org Subject: Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] Hi Ritika, I am glad that adding your proxy information got you one step closer to a working configuration. However, I cannot say why your password isn't being properly validated. If you can reach the umls server and your credentials are correct then the umls server should reply positively and ctakes should let the pipeline continue. Does anybody else on the devlist have any ideas? Sean From: Jain, Ritika Sent: Thursday, July 19, 2018 5:06 AM To: dev@ctakes.apache.org Subject: RE: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] I can get it working adding proxy parameters in the java command, now I do not get the connection timeout, but a different error that the user is not valid. If you follow the email chain below, the support person from UMLS says that my user is a valid user and the account user to validate the user is not for end point users. Can you help me with this? 14:29:06,054 DEBUG [DataBinder] DataBinder requires binding of required fields [] 14:29:06,060 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@39c6fd02] 14:29:06,067 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@39c6fd02] 14:29:06,072 INFO [Chunker] Chunker model file: org/apache/ctakes/chunker/models/chunker-model.zip 14:29:07,745 DEBUG [DataBinder] DataBinder requires binding of required fields [] 14:29:07,746 INFO [TokenizerAnnotatorPTB] Initializing org.apache.ctakes.core.ae.TokenizerAnnotatorPTB 14:29:07,756 DEBUG [DataBinder] DataBinder requires binding of required fields [] 14:29:07,770 INFO [ContextDependentTokenizerAnnotator] Finite state machines loaded. 14:29:07,778 DEBUG [DataBinder] DataBinder requires binding of required fields [] 14:29:07,779 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor
RE: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL]
Hi Sean See this reply from UMLS support That endpoint (documented here: https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.proofpoint.com%2Fv2%2Furl%3Fu%3Dhttps-3A__emea01.safelinks.protection.outlook.com_-3Furl-3Dhttps-253A-252F-252Furldefense.proofpoint.com-252Fv2-252Furl-253Fu-253Dhttps-2D3A-5F-5Futs.nlm.nih.gov-5Fhelp-5Flicense-5Fvalidateumlsuserhelp.html-2526d-253DDwIFAg-2526c-253DqS4goWBT7poplM69zy-5F3xhKwEW14JZMSdioCoppxeFU-2526r-253Dfs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao-2526m-253DfQiwb4h2SxUTGfMyinBlOo9wdbQdJuM3zugwflzf1F8-2526s-253DuO0nsPPev-2DybnYKedCLy-5F4HwS1GZsf7u-2D8H5w2UOyek-2526e-26amp-3Bdata-3D02-257C01-257C-257C032497f07be34e9a6b3908d5ecd6787f-257C1a407a2d76754d178692b3ac285306e4-257C0-257C0-257C636675328259370278-26amp-3Bsdata-3DkRL2rxurzA6WxsuiSYm9zRwvVeaMAys3dXFcbR1y-252BZc-253D-26amp-3Breserved-3D0-3D%26d%3DDwIFAg%26c%3DqS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU%26r%3Dfs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao%26m%3DGqHa003bWO-wQ-O5I0ufpc_LJHggfChk83dWdrndMS4%26s%3D-bDdjhQcUbADrAh24ci4iuJtNAILeTUJ7wYnpPORBQU%26edata=02%7C01%7C%7C2cb58d890ef94c7aa76408d5ece0669d%7C1a407a2d76754d178692b3ac285306e4%7C0%7C0%7C636675370907437611sdata=MAlPCxcpI%2F5QX92datNpg%2BfZjSyb9IBRl%2FE7q9mevzw%3Dreserved=0= ) is not meant for end users, so it will not work with your license code and username. The ctakes CVD uses the same end point ( also, pointed out in the logs I shared). Regards, Ritika -Original Message- From: Finan, Sean Sent: Thursday, July 19, 2018 4:39 PM To: dev@ctakes.apache.org Subject: Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] Hi Ritika, I am glad that adding your proxy information got you one step closer to a working configuration. However, I cannot say why your password isn't being properly validated. If you can reach the umls server and your credentials are correct then the umls server should reply positively and ctakes should let the pipeline continue. Does anybody else on the devlist have any ideas? Sean From: Jain, Ritika Sent: Thursday, July 19, 2018 5:06 AM To: dev@ctakes.apache.org Subject: RE: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] I can get it working adding proxy parameters in the java command, now I do not get the connection timeout, but a different error that the user is not valid. If you follow the email chain below, the support person from UMLS says that my user is a valid user and the account user to validate the user is not for end point users. Can you help me with this? 14:29:06,054 DEBUG [DataBinder] DataBinder requires binding of required fields [] 14:29:06,060 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@39c6fd02] 14:29:06,067 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@39c6fd02] 14:29:06,072 INFO [Chunker] Chunker model file: org/apache/ctakes/chunker/models/chunker-model.zip 14:29:07,745 DEBUG [DataBinder] DataBinder requires binding of required fields [] 14:29:07,746 INFO [TokenizerAnnotatorPTB] Initializing org.apache.ctakes.core.ae.TokenizerAnnotatorPTB 14:29:07,756 DEBUG [DataBinder] DataBinder requires binding of required fields [] 14:29:07,770 INFO [ContextDependentTokenizerAnnotator] Finite state machines loaded. 14:29:07,778 DEBUG [DataBinder] DataBinder requires binding of required fields [] 14:29:07,779 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@725e7dcc] 14:29:07,782 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@725e7dcc] 14:29:07,785 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@725e7dcc] 14:29:07,792 TRACE [TypeConverterDelegate] Converting String to [class java.lang.String] using property editor [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@725e7dcc] 14:29:07,854 DEBUG [StandardEnvironment] Initializing new StandardEnvironment 14:29:07,857 DEBUG [StandardEnvironment] Adding [systemProperties] PropertySource with lowest search precedence 14:29:07,858 DEBUG [StandardEnvironment] Adding [systemEnvironment] PropertySource with lowest search precedence 14:29:07,860 DEBUG [StandardEnvironment] Initialized StandardEnvironment with PropertySources [systemProperties,systemEnvironment] 14:29:07,864 DEBUG [StandardEnvironment] Initializing new StandardEnvironment 14:29:07,865 DEBUG [StandardEnvironment] Adding [systemProperties
RE: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL]
14:29:07,946 INFO [DictionaryDescriptorParser] Parsing dictionary specifications: 14:29:07,990 INFO [UmlsUserApprover] Checking UMLS Account at https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser for user ritikajain: 14:29:10,569 ERROR [UmlsUserApprover] UMLS Account at https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser is not valid for user with x Ritika -Original Message- From: Jain, Ritika Sent: Thursday, July 19, 2018 9:18 AM To: dev@ctakes.apache.org Subject: Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] I am using a proxy. — Regards, Ritika > On 19-Jul-2018, at 9:03 AM, Finan, Sean > wrote: > > Hi Ritika, > > The last line of this log is: > > 01:41:17,563 ERROR [UmlsUserApprover] Connection timed out: connect > > Are you behind a firewall? > > ________ > From: Jain, Ritika > Sent: Wednesday, July 18, 2018 4:12 PM > To: dev@ctakes.apache.org > Subject: RE: Re: Cannot authenticate license on REST API > TRACKING:000308016 [EXTERNAL] > > 01:40:54,218 DEBUG [DataBinder] DataBinder requires binding of > required fields [] > 01:40:54,225 TRACE [TypeConverterDelegate] Converting String to [class > java.lang.String] using property editor > [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@57 > 04835d] > 01:40:54,233 TRACE [TypeConverterDelegate] Converting String to [class > java.lang.String] using property editor > [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@57 > 04835d] > 01:40:54,238 INFO [Chunker] Chunker model file: > org/apache/ctakes/chunker/models/chunker-model.zip > 01:40:55,825 DEBUG [DataBinder] DataBinder requires binding of > required fields [] > 01:40:55,825 INFO [TokenizerAnnotatorPTB] Initializing > org.apache.ctakes.core.ae.TokenizerAnnotatorPTB > 01:40:55,835 DEBUG [DataBinder] DataBinder requires binding of > required fields [] > 01:40:55,845 INFO [ContextDependentTokenizerAnnotator] Finite state machines > loaded. > 01:40:55,853 DEBUG [DataBinder] DataBinder requires binding of > required fields [] > 01:40:55,854 TRACE [TypeConverterDelegate] Converting String to [class > java.lang.String] using property editor > [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@40 > 36e837] > 01:40:55,856 TRACE [TypeConverterDelegate] Converting String to [class > java.lang.String] using property editor > [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@40 > 36e837] > 01:40:55,860 TRACE [TypeConverterDelegate] Converting String to [class > java.lang.String] using property editor > [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@40 > 36e837] > 01:40:55,862 TRACE [TypeConverterDelegate] Converting String to [class > java.lang.String] using property editor > [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@40 > 36e837] > 01:40:55,916 DEBUG [StandardEnvironment] Initializing new > StandardEnvironment > 01:40:55,919 DEBUG [StandardEnvironment] Adding [systemProperties] > PropertySource with lowest search precedence > 01:40:55,921 DEBUG [StandardEnvironment] Adding [systemEnvironment] > PropertySource with lowest search precedence > 01:40:55,923 DEBUG [StandardEnvironment] Initialized > StandardEnvironment with PropertySources > [systemProperties,systemEnvironment] > 01:40:55,926 DEBUG [StandardEnvironment] Initializing new > StandardEnvironment > 01:40:55,927 DEBUG [StandardEnvironment] Adding [systemProperties] > PropertySource with lowest search precedence > 01:40:55,928 DEBUG [StandardEnvironment] Adding [systemEnvironment] > PropertySource with lowest search precedence > 01:40:55,930 DEBUG [StandardEnvironment] Initialized > StandardEnvironment with PropertySources > [systemProperties,systemEnvironment] > 01:40:55,933 DEBUG [StandardEnvironment] Initializing new > StandardEnvironment > 01:40:55,934 DEBUG [StandardEnvironment] Adding [systemProperties] > PropertySource with lowest search precedence > 01:40:55,936 DEBUG [StandardEnvironment] Adding [systemEnvironment] > PropertySource with lowest search precedence > 01:40:55,938 DEBUG [StandardEnvironment] Initialized > StandardEnvironment with PropertySources > [systemProperties,systemEnvironment] > 01:40:55,949 DEBUG [StandardEnvironment] Initializing new > StandardEnvironment > 01:40:55,950 DEBUG [StandardEnvironment] Adding [systemProperties] > PropertySource with lowest search precedence > 01:40:55,953 DEBUG [StandardEnvironment] Adding [systemEnvironment] > PropertySource with lowest search precedence > 01:40:55,955 DEBUG [StandardEnvironment] Initialized > StandardEnvironment with PropertySources > [systemPro
Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL]
I am using a proxy. — Regards, Ritika > On 19-Jul-2018, at 9:03 AM, Finan, Sean > wrote: > > Hi Ritika, > > The last line of this log is: > > 01:41:17,563 ERROR [UmlsUserApprover] Connection timed out: connect > > Are you behind a firewall? > > ________ > From: Jain, Ritika > Sent: Wednesday, July 18, 2018 4:12 PM > To: dev@ctakes.apache.org > Subject: RE: Re: Cannot authenticate license on REST API TRACKING:000308016 > [EXTERNAL] > > 01:40:54,218 DEBUG [DataBinder] DataBinder requires binding of required > fields [] > 01:40:54,225 TRACE [TypeConverterDelegate] Converting String to [class > java.lang.String] using property editor > [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@5704835d] > 01:40:54,233 TRACE [TypeConverterDelegate] Converting String to [class > java.lang.String] using property editor > [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@5704835d] > 01:40:54,238 INFO [Chunker] Chunker model file: > org/apache/ctakes/chunker/models/chunker-model.zip > 01:40:55,825 DEBUG [DataBinder] DataBinder requires binding of required > fields [] > 01:40:55,825 INFO [TokenizerAnnotatorPTB] Initializing > org.apache.ctakes.core.ae.TokenizerAnnotatorPTB > 01:40:55,835 DEBUG [DataBinder] DataBinder requires binding of required > fields [] > 01:40:55,845 INFO [ContextDependentTokenizerAnnotator] Finite state machines > loaded. > 01:40:55,853 DEBUG [DataBinder] DataBinder requires binding of required > fields [] > 01:40:55,854 TRACE [TypeConverterDelegate] Converting String to [class > java.lang.String] using property editor > [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@4036e837] > 01:40:55,856 TRACE [TypeConverterDelegate] Converting String to [class > java.lang.String] using property editor > [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@4036e837] > 01:40:55,860 TRACE [TypeConverterDelegate] Converting String to [class > java.lang.String] using property editor > [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@4036e837] > 01:40:55,862 TRACE [TypeConverterDelegate] Converting String to [class > java.lang.String] using property editor > [org.apache.uima.fit.internal.propertyeditors.GetAsTextStringEditor@4036e837] > 01:40:55,916 DEBUG [StandardEnvironment] Initializing new StandardEnvironment > 01:40:55,919 DEBUG [StandardEnvironment] Adding [systemProperties] > PropertySource with lowest search precedence > 01:40:55,921 DEBUG [StandardEnvironment] Adding [systemEnvironment] > PropertySource with lowest search precedence > 01:40:55,923 DEBUG [StandardEnvironment] Initialized StandardEnvironment with > PropertySources [systemProperties,systemEnvironment] > 01:40:55,926 DEBUG [StandardEnvironment] Initializing new StandardEnvironment > 01:40:55,927 DEBUG [StandardEnvironment] Adding [systemProperties] > PropertySource with lowest search precedence > 01:40:55,928 DEBUG [StandardEnvironment] Adding [systemEnvironment] > PropertySource with lowest search precedence > 01:40:55,930 DEBUG [StandardEnvironment] Initialized StandardEnvironment with > PropertySources [systemProperties,systemEnvironment] > 01:40:55,933 DEBUG [StandardEnvironment] Initializing new StandardEnvironment > 01:40:55,934 DEBUG [StandardEnvironment] Adding [systemProperties] > PropertySource with lowest search precedence > 01:40:55,936 DEBUG [StandardEnvironment] Adding [systemEnvironment] > PropertySource with lowest search precedence > 01:40:55,938 DEBUG [StandardEnvironment] Initialized StandardEnvironment with > PropertySources [systemProperties,systemEnvironment] > 01:40:55,949 DEBUG [StandardEnvironment] Initializing new StandardEnvironment > 01:40:55,950 DEBUG [StandardEnvironment] Adding [systemProperties] > PropertySource with lowest search precedence > 01:40:55,953 DEBUG [StandardEnvironment] Adding [systemEnvironment] > PropertySource with lowest search precedence > 01:40:55,955 DEBUG [StandardEnvironment] Initialized StandardEnvironment with > PropertySources [systemProperties,systemEnvironment] > 01:40:55,960 DEBUG [StandardEnvironment] Initializing new StandardEnvironment > 01:40:55,961 DEBUG [StandardEnvironment] Adding [systemProperties] > PropertySource with lowest search precedence > 01:40:55,963 DEBUG [StandardEnvironment] Adding [systemEnvironment] > PropertySource with lowest search precedence > 01:40:55,965 DEBUG [StandardEnvironment] Initialized StandardEnvironment with > PropertySources [systemProperties,systemEnvironment] > 01:40:55,972 TRACE [TypeConverterDelegate] Converting String to [int] using > property editor > [org.springframework.beans.propertyeditors.CustomNumberEdito
RE: Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL]
Does this help? I generated the logs Ritika -Original Message- From: Finan, Sean Sent: Thursday, July 19, 2018 12:28 AM To: dev@ctakes.apache.org Subject: Re: Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] Hi Ritika, In your ctakes directory there might be a file named cTAKES.error.log If it is present you can check for more detailed information. I can't think of anything else to tell you right now. Sean From: Jain, Ritika Sent: Wednesday, July 18, 2018 2:13 PM To: dev@ctakes.apache.org Subject: RE: Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] Hi Sean, Thanks for reaching out, the password and username is right, it has been 2-3 days now since I have been struggling with it. There are no special characters anywhere, which is why I am sure if there is something else happening. The steps that I am following are: - update the runctakescvd.bat and runctakescpe.bat java commands as mentioned in the install guide - added the username password and vendor information in the resource.xml Anything else that I am missing? Ritika -Original Message- From: Finan, Sean Sent: Wednesday, July 18, 2018 11:10 PM To: dev@ctakes.apache.org Subject: Re: Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] Hi Ritika, It is a little easier to start the clinical pipeline as outlined here: https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.proofpoint.com%2Fv2%2Furl%3Fu%3Dhttps-3A__emea01.safelinks.protection.outlook.com_-3Furl-3Dhttps-253A-252F-252Fcwiki.apache.org-252Fconfluence-252Fdisplay-252FCTAKES-252FDefault-252BClinical-252BPipeline-26amp-3Bdata-3D02-257C01-257C-257C032497f07be34e9a6b3908d5ecd6787f-257C1a407a2d76754d178692b3ac285306e4-257C0-257C0-257C636675328259370278-26amp-3Bsdata-3DKr6BVnysDEBAOtmGdQ2g32VyEzUI9ALeIDjMxMZEziQ-253D-26amp-3Breserved-3D0%26d%3DDwIFAg%26c%3DqS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU%26r%3Dfs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao%26m%3DGqHa003bWO-wQ-O5I0ufpc_LJHggfChk83dWdrndMS4%26s%3DefdtCufyrjpKEACItRl7ndVqPziRZjypcKSP9uzgS80%26edata=02%7C01%7C%7C2cb58d890ef94c7aa76408d5ece0669d%7C1a407a2d76754d178692b3ac285306e4%7C0%7C0%7C636675370907437611sdata=ShtdLe6ASvx0rt6aey%2BE9XLCZCKM9vML%2FneF%2BBXVm9o%3Dreserved=0= One thing that may cause problems would be a space or special character in the username or password. Even if it is valid for the umls browser it may not go across the wire from ctakes properly. If that is the case then please log a jira item and provide a username or password formatted like yours (but not yours). https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.proofpoint.com%2Fv2%2Furl%3Fu%3Dhttps-3A__emea01.safelinks.protection.outlook.com_-3Furl-3Dhttps-253A-252F-252Fissues.apache.org-252Fjira-252Fprojects-252FCTAKES-26amp-3Bdata-3D02-257C01-257C-257C032497f07be34e9a6b3908d5ecd6787f-257C1a407a2d76754d178692b3ac285306e4-257C0-257C0-257C636675328259370278-26amp-3Bsdata-3D-252FkHBBB-252FpKzdtuTPYFMXh7XfBDyDc5Quru3lfmkHKn-252FE-253D-26amp-3Breserved-3D0%26d%3DDwIFAg%26c%3DqS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU%26r%3Dfs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao%26m%3DGqHa003bWO-wQ-O5I0ufpc_LJHggfChk83dWdrndMS4%26s%3DIQyL081ACyuobqOLExFlnZklSZptVNatpiBe1AE9TBE%26edata=02%7C01%7C%7C2cb58d890ef94c7aa76408d5ece0669d%7C1a407a2d76754d178692b3ac285306e4%7C0%7C0%7C636675370907437611sdata=dIJztzDlH%2BGCmzZgPNlbyeXAHl3PGZjn0sG4nP%2BQmuc%3Dreserved=0= Sean From: Jain, Ritika Sent: Wednesday, July 18, 2018 1:13 PM To: dev@ctakes.apache.org Subject: FW: Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] Hi, I am running into issue while following the user installation manual i.e. running the CVD Debugger with Fast Annotator. It keeps saying that the UMLS user is invalid but as the email confirms below that the user I am using is indeed valid. I am following the exact steps as mentioned in the user install guide https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.proofpoint.com%2Fv2%2Furl%3Fu%3Dhttps-3A__emea01.safelinks.protection.outlook.com_-3Furl-3Dhttps-253A-252F-252Furldefense.proofpoint.com-252Fv2-252Furl-253Fu-253Dhttps-2D3A-5F-5Fcwiki.apache.org-5Fconfluence-5Fdisplay-5FCTAKES-5FcTAKES-2D2B4.0-2D2BUser-2D2BInstall-2D2BGuide-2526d-253DDwIFAg-2526c-253DqS4goWBT7poplM69zy-5F3xhKwEW14JZMSdioCoppxeFU-2526r-253Dfs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao-2526m-253DfQiwb4h2SxUTGfMyinBlOo9wdbQdJuM3zugwflzf1F8-2526s-253DlORPr0LqRFrzX1VLCOtSG-5FHO6PQBUu5BEy7pTPZd4Kg-2526e-26amp-3Bdata-3D02-257C01-257C-257C032497f07be34e9a6b3908d5ecd6787f-257C1a407a2d76754d178692b3ac285306e4-257C0-257C0-257C636675328259370278-26amp-3Bsdata-3D6xFM48A8dJgiGf9NwDSEVaTKh-252FxVdd3lq-252FbqHWozEIg-253D-26amp-3Breserved-3D0-3D%26d%3DDwIFAg%26c%3DqS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU%26r
RE: Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL]
Hi Sean, Thanks for reaching out, the password and username is right, it has been 2-3 days now since I have been struggling with it. There are no special characters anywhere, which is why I am sure if there is something else happening. The steps that I am following are: - update the runctakescvd.bat and runctakescpe.bat java commands as mentioned in the install guide - added the username password and vendor information in the resource.xml Anything else that I am missing? Ritika -Original Message- From: Finan, Sean Sent: Wednesday, July 18, 2018 11:10 PM To: dev@ctakes.apache.org Subject: Re: Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] Hi Ritika, It is a little easier to start the clinical pipeline as outlined here: https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fcwiki.apache.org%2Fconfluence%2Fdisplay%2FCTAKES%2FDefault%2BClinical%2BPipelinedata=02%7C01%7C%7C032497f07be34e9a6b3908d5ecd6787f%7C1a407a2d76754d178692b3ac285306e4%7C0%7C0%7C636675328259370278sdata=Kr6BVnysDEBAOtmGdQ2g32VyEzUI9ALeIDjMxMZEziQ%3Dreserved=0 One thing that may cause problems would be a space or special character in the username or password. Even if it is valid for the umls browser it may not go across the wire from ctakes properly. If that is the case then please log a jira item and provide a username or password formatted like yours (but not yours). https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fissues.apache.org%2Fjira%2Fprojects%2FCTAKESdata=02%7C01%7C%7C032497f07be34e9a6b3908d5ecd6787f%7C1a407a2d76754d178692b3ac285306e4%7C0%7C0%7C636675328259370278sdata=%2FkHBBB%2FpKzdtuTPYFMXh7XfBDyDc5Quru3lfmkHKn%2FE%3Dreserved=0 Sean From: Jain, Ritika Sent: Wednesday, July 18, 2018 1:13 PM To: dev@ctakes.apache.org Subject: FW: Re: Cannot authenticate license on REST API TRACKING:000308016 [EXTERNAL] Hi, I am running into issue while following the user installation manual i.e. running the CVD Debugger with Fast Annotator. It keeps saying that the UMLS user is invalid but as the email confirms below that the user I am using is indeed valid. I am following the exact steps as mentioned in the user install guide https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.proofpoint.com%2Fv2%2Furl%3Fu%3Dhttps-3A__cwiki.apache.org_confluence_display_CTAKES_cTAKES-2B4.0-2BUser-2BInstall-2BGuide%26d%3DDwIFAg%26c%3DqS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU%26r%3Dfs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao%26m%3DfQiwb4h2SxUTGfMyinBlOo9wdbQdJuM3zugwflzf1F8%26s%3DlORPr0LqRFrzX1VLCOtSG_HO6PQBUu5BEy7pTPZd4Kg%26edata=02%7C01%7C%7C032497f07be34e9a6b3908d5ecd6787f%7C1a407a2d76754d178692b3ac285306e4%7C0%7C0%7C636675328259370278sdata=6xFM48A8dJgiGf9NwDSEVaTKh%2FxVdd3lq%2FbqHWozEIg%3Dreserved=0= Please help! Regards, Ritika Jain Philips Healthcare India From: NLM Support Sent: Wednesday, July 18, 2018 8:38 PM To: Jain, Ritika Subject: RE: Re: Cannot authenticate license on REST API TRACKING:000308016 Hi Ritika, That endpoint (documented here: https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.proofpoint.com%2Fv2%2Furl%3Fu%3Dhttps-3A__uts.nlm.nih.gov_help_license_validateumlsuserhelp.html%26d%3DDwIFAg%26c%3DqS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU%26r%3Dfs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao%26m%3DfQiwb4h2SxUTGfMyinBlOo9wdbQdJuM3zugwflzf1F8%26s%3DuO0nsPPev-ybnYKedCLy_4HwS1GZsf7u-8H5w2UOyek%26edata=02%7C01%7C%7C032497f07be34e9a6b3908d5ecd6787f%7C1a407a2d76754d178692b3ac285306e4%7C0%7C0%7C636675328259370278sdata=kRL2rxurzA6WxsuiSYm9zRwvVeaMAys3dXFcbR1y%2BZc%3Dreserved=0=) is not meant for end users, so it will not work with your license code and username. I can confirm that your account is active, so everything should be okay on our end. You can check your username and password by logging in here: https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.proofpoint.com%2Fv2%2Furl%3Fu%3Dhttps-3A__utslogin.nlm.nih.gov_cas_login-3Fservice-3Dhttps-3A__uts.nlm.nih.gov-3A443__j-5Fspring-5Fcas-5Fsecurity-5Fcheck%26d%3DDwIFAg%26c%3DqS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU%26r%3Dfs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao%26m%3DfQiwb4h2SxUTGfMyinBlOo9wdbQdJuM3zugwflzf1F8%26s%3DgKSa_R22LhzzLZz5-fa4N9IEVxx4Uf4uJyZBUN_VRbM%26edata=02%7C01%7C%7C032497f07be34e9a6b3908d5ecd6787f%7C1a407a2d76754d178692b3ac285306e4%7C0%7C0%7C636675328259370278sdata=cCwMvTWY0PBffEfcfzms%2FvVUNpEMIwPIXKyu5RcnMR0%3Dreserved=0=. Is cTakes giving you an error message? You may want to check the cTakes listserv or post a question there: https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.proofpoint.com%2Fv2%2Furl%3Fu%3Dhttps-3A__ctakes.markmail.org_search_-3Fq-3D%26d%3DDwIFAg%26c%3DqS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU%26r%3Dfs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao%26m%3DfQiwb4h2SxUTGfMyinBlOo9wdbQdJuM3zugwflzf1F8%26s
FW: Re: Cannot authenticate license on REST API TRACKING:000308016
Hi, I am running into issue while following the user installation manual i.e. running the CVD Debugger with Fast Annotator. It keeps saying that the UMLS user is invalid but as the email confirms below that the user I am using is indeed valid. I am following the exact steps as mentioned in the user install guide https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+4.0+User+Install+Guide Please help! Regards, Ritika Jain Philips Healthcare India From: NLM Support Sent: Wednesday, July 18, 2018 8:38 PM To: Jain, Ritika Subject: RE: Re: Cannot authenticate license on REST API TRACKING:000308016 Hi Ritika, That endpoint (documented here: https://uts.nlm.nih.gov/help/license/validateumlsuserhelp.html) is not meant for end users, so it will not work with your license code and username. I can confirm that your account is active, so everything should be okay on our end. You can check your username and password by logging in here: https://utslogin.nlm.nih.gov/cas/login?service=https://uts.nlm.nih.gov:443//j_spring_cas_security_check. Is cTakes giving you an error message? You may want to check the cTakes listserv or post a question there: https://ctakes.markmail.org/search/?q= Regards, UMLS Support --- Original Message --- From: Ritika Jain Received: Tue Jul 17 2018 21:03:59 GMT-0400 (Eastern Daylight Time) To: Inbound - NLM Support Subject: Re: Cannot authenticate license on REST API TRACKING:000308016 Hello, I did follow instructions on ctakes and it didn't work, then I tried hitting the API using postman tool to validate user and it still did not work. Please check the attachment from previous email. I am not able to validate my user for umls - Regards, Ritika > On 18-Jul-2018, at 2:44 AM, NLM Support > mailto:nlm-supp...@nlm.nih.gov>> wrote: > > Thank you for your question. Keep in mind that we are not involved with the > development or support of cTakes, but I looked at the cTakes install > instructions, and it looks like there is a section called "Add UMLS Access > Rights." See: > https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+4.0+User+Install+Guide#cTAKES4.0UserInstallGuide-InstallcTAKES<https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fcwiki.apache.org%2Fconfluence%2Fdisplay%2FCTAKES%2FcTAKES%2B4.0%2BUser%2BInstall%2BGuide%23cTAKES4.0UserInstallGuide-InstallcTAKES=02%7C01%7C%7C65eb59d48e304bac81a508d5ecc03bba%7C1a407a2d76754d178692b3ac285306e4%7C0%7C0%7C636675232734902490=t8VxdpyU4oQSs%2BQ%2BEiualeDiduL3CVy6TNwCxGuUepo%3D=0> > > See if that helps. It looks like the only information that is required is > your username and password. Please let us know if you have questions. > > Regards, > UMLS Support > > > > > Case Information: > Case #: CAS-241505-Y9C4L8 > > Summary: Cannot authenticate license on REST API > > Details: Hello, > > I am trying to validate the license as part of Apache cTAKES and keep getting > false in response. > > I have tried to use it with postman also an still does not work, attachment > has the request from postman > > Regards > Ritika Jain > Philips Healthcare > India > > Case Created: 7/17/2018 The information contained in this message may be confidential and legally protected under applicable law. The message is intended solely for the addressee(s). If you are not the intended recipient, you are hereby notified that any use, forwarding, dissemination, or reproduction of this message is strictly prohibited and may be unlawful. If you are not the intended recipient, please contact the sender by return e-mail and destroy all copies of the original message.
