[Dspace-tech] Collection Visualisation tool ?
Hi all, We've seen the subject / collection visualisation tool which is available via DigitalCommons - the "wheel" which appears on the following site: http://www.repository.law.indiana.edu/ We were wondering whether anything like this is available for DSpace 3.X which could be included on our landing / welcome page. Thanks in Advance. Regards, Patrick Rynhart -- October Webinars: Code for Performance Free Intel webinars can help you accelerate application performance. Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from the latest Intel processors and coprocessors. See abstracts and register > http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech List Etiquette: https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
Re: [Dspace-tech] CRIS Installation not clear
Dear Keir, have you published under tomcat the new webapp builded with mvn package? I have the suspect that the code in your tomcat is out-of-update. You have mentioned tomcat5, please upgrade tomcat at least to the 6 version, DSpace-CRIS is not tested for tomcat5 Luigi Andrea Il 17/10/2013 01:32, Keir Vaughan-Taylor ha scritto: > Thank you for you help. > I recompiled doing a fresh_install > The postgres sql updates ran without error and also the sql > base-configuration-crismodule.sql ran without error. > Restored the original database > > After restarting httpd and tomcat5 the CRIS module in the administration > section reference in the installation guide doesn't appear. > > Must be close to working but can't see where the module is initiated. > > > On Wed, 2013-10-16 at 09:07 +0200, Andrea Bollini wrote: >> Hi Keir, >> you are right the installation instructions are not so clear as need and >> don't include information for upgrading an existent installation. >> We will try to update this documentation as soon as possible, please >> note that, in these last weeks, much developer resources from my company >> has been devolved to the next DSpace 4.0 release so we are slight late >> with the dspace-cris upgrade. >> 1) mvn package from the dspace-src directory is the right way to build >> DSpace-CRIS >> 2) to install dspace-cris on top of an existent dspace installation, you >> need to follow the steps required for a normal dspace update (like you >> have done) plus execute the following sql scripts: >> addon-crismodule.sql, addon-crispubmed.sql, addon-subscription.sql all >> located in >> https://github.com/CILEA/DSpace/tree/dspace-cris-1.8.2.1-beta/dspace/etc/postgres >> These sql will create the extra tables and sequences need by the >> DSpace-CRIS entities. >> Finally, if you want to start with a preconfigured, very basic, >> datamodel you can proceed with the post installation instructions, i.e. >> load /etc/postgres/base-configuration-crismodule.sql >> >> Hope this help, >> Andrea >> >> >> >> Il 16/10/2013 04.00, Keir Vaughan-Taylor ha scritto: >>> I want to install CRIS on DSpace 1.82. In academia the package is all >>> the rage. I have been using install instructions from Github >>> >>> http://cilea.github.io/dspace-cris/installation.html >>> >>> The install instructions refer to unpacking the CRIS module in >>> [dspace-parent] >>> >>> The "mvn package" command only works for me in the >>> [dspace-src] directory. I can go with that but possibly that is wrong >>> also. >>> >>> The GIT instructions are for a fresh install with no existing database >>> rather than adding the module to an existing setup. >>> >>> At first I tried leaving the database intact and compiling using >>> "ant update" instead of "ant fresh_install". >>> >>> After which the post-install script "base-configuration-crismodule.sql" >>> fails (using psql) and also the CRIS module doesn't appear in the DSpace >>> administration. >>> >>> I tried deleting the existing database and using ant fresh_install >>> but still running base-configuration-crismodule.sql with psql fails. >>> (It tries to do inserts into non existant tables.) Again CRIS module >>> doesn't appear in administration tab >>> >>> Anyone know what I'm doing wrong? Any hints and tips? >>> >>> >> -- October Webinars: Code for Performance Free Intel webinars can help you accelerate application performance. Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from the latest Intel processors and coprocessors. See abstracts and register > http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech List Etiquette: https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
Re: [Dspace-tech] CRIS Installation not clear
Thank you for you help. I recompiled doing a fresh_install The postgres sql updates ran without error and also the sql base-configuration-crismodule.sql ran without error. Restored the original database After restarting httpd and tomcat5 the CRIS module in the administration section reference in the installation guide doesn't appear. Must be close to working but can't see where the module is initiated. On Wed, 2013-10-16 at 09:07 +0200, Andrea Bollini wrote: > Hi Keir, > you are right the installation instructions are not so clear as need and > don't include information for upgrading an existent installation. > We will try to update this documentation as soon as possible, please > note that, in these last weeks, much developer resources from my company > has been devolved to the next DSpace 4.0 release so we are slight late > with the dspace-cris upgrade. > 1) mvn package from the dspace-src directory is the right way to build > DSpace-CRIS > 2) to install dspace-cris on top of an existent dspace installation, you > need to follow the steps required for a normal dspace update (like you > have done) plus execute the following sql scripts: > addon-crismodule.sql, addon-crispubmed.sql, addon-subscription.sql all > located in > https://github.com/CILEA/DSpace/tree/dspace-cris-1.8.2.1-beta/dspace/etc/postgres > These sql will create the extra tables and sequences need by the > DSpace-CRIS entities. > Finally, if you want to start with a preconfigured, very basic, > datamodel you can proceed with the post installation instructions, i.e. > load /etc/postgres/base-configuration-crismodule.sql > > Hope this help, > Andrea > > > > Il 16/10/2013 04.00, Keir Vaughan-Taylor ha scritto: > > I want to install CRIS on DSpace 1.82. In academia the package is all > > the rage. I have been using install instructions from Github > > > > http://cilea.github.io/dspace-cris/installation.html > > > > The install instructions refer to unpacking the CRIS module in > > [dspace-parent] > > > > The "mvn package" command only works for me in the > > [dspace-src] directory. I can go with that but possibly that is wrong > > also. > > > > The GIT instructions are for a fresh install with no existing database > > rather than adding the module to an existing setup. > > > > At first I tried leaving the database intact and compiling using > > "ant update" instead of "ant fresh_install". > > > > After which the post-install script "base-configuration-crismodule.sql" > > fails (using psql) and also the CRIS module doesn't appear in the DSpace > > administration. > > > > I tried deleting the existing database and using ant fresh_install > > but still running base-configuration-crismodule.sql with psql fails. > > (It tries to do inserts into non existant tables.) Again CRIS module > > doesn't appear in administration tab > > > > Anyone know what I'm doing wrong? Any hints and tips? > > > > > > -- -- October Webinars: Code for Performance Free Intel webinars can help you accelerate application performance. Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from the latest Intel processors and coprocessors. See abstracts and register > http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech List Etiquette: https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
Re: [Dspace-tech] mergeing assetstores.
Hi All, Sorry to bump a really old thread, but I just ran into this problem today, and figured I should share my notes: http://library.osu.edu/blogs/it/merge-two-assetstores-dspace/ I think the best part of the story is that we didn't have any nagios alerts on this box, I just randomly ssh'ed in, and noticed that the old assetstores we're nearing 99.9% full. DSpace log didn't yet have any application errors, since there was still some 500MB of space left... yikes. We have inherited a DSpace instance from another service provider, and they have used multiple assetstores to hold the bitstreams. Our sysadmin can do disk-magic, and just present large disks, so we are going to merge two existing assetstores into a single one. Here’s a simplification of the situation. /assetstore0 == 200GB /assetstore1 == 100GB /consolidatedAssetstore == 400GB dspace.cfg has: assetstore.dir = /dspace/assetstore assetstore.dir.1 = /assetstore1 assetstore.incoming = 0 And /dspace/assetstore is a symlink to /assetstore0 So. To address this, my process is: ##sync contents of the two assetstores to a single assetstore rsync -a –progress –stats /assetstore0/ /consolidatedAssetstore rsync -a –progress –stats /assetstore1/ /consolidatedAssetstore ##point the symlink to the new storage location unlink /dspace/assetstore ln -s /consolidatedAssetstore /dspace/assetstore ##run some sql to “merge” the two assetstores psql dspace update bitstream set store_number=0; ##Trim the dspace.cfg to remove the second assetstore. assetstore.dir = /dspace/assetstore assetstore.incoming = 0 Restart tomcat, so that the updated dspace.cfg takes effect. Then test to make sure your bitstreams still work. Lastly, here’s a SQL query to find bitstreams in assetstore2, hosted on GitHub Gist. https://gist.github.com/peterdietz/7009560 Peter Dietz On Tue, Jun 14, 2011 at 2:39 PM, Blanco, Jose wrote: > Oh, ok I see. I share in your paranoia and will keep this in mind. > > Thank you! > Jose > > -Original Message- > From: Brian Freels-Stendel [mailto:bfre...@unm.edu] > Sent: Tuesday, June 14, 2011 2:26 PM > To: dspace-tech@lists.sourceforge.net; Blanco, Jose > Subject: Re: [Dspace-tech] mergeing assetstores. > > Certainly, if they differ, there's no problem. (And, to fess up, I was > considering the last string as part of the string, not the filename, but it > leaves us with the same situation.) If they're the same, one would > overwrite the other. As I say, it's unlikely that the randomly-generated > numbers would be the same, but it's possible. I'm a little paranoid about > unlikely-but-possible things, but I think they're worth keeping in mind. > > B-- > > >>> On 6/14/2011 at 12:07 PM, in message > > <54fa544e85d3934baa21bf8a84be5cd9171d464...@itcs-ecls-1-vs3.adsroot.itcs.umich.e > u>, "Blanco, Jose" wrote: > > I don't quite see what you're saying. > > > > Say I have two files, could they not both be in the same dir, but but > have > > different names, like here: > > > > /assetstore/10/04/02/10040212345 > > /assetstore/10/04/02/10040209898 > > > > ? > > > > -Original Message- > > From: Brian Freels-Stendel [mailto:bfre...@unm.edu] > > Sent: Tuesday, June 14, 2011 2:00 PM > > To: dspace-tech@lists.sourceforge.net; Blanco, Jose > > Subject: RE: [Dspace-tech] mergeing assetstores. > > > > At that level, they don't have names...only the path and then the file > as a > > string of bits. The names and file extensions are handled in the > database. > > > > B-- > > > On 6/14/2011 at 11:56 AM, in message > > > <54fa544e85d3934baa21bf8a84be5cd9171d464...@itcs-ecls-1-vs3.adsroot.itcs.umich.e > > > > u>, "Blanco, Jose" wrote: > >> But why would two items having the same path be a problem as long as > their > >> name is distinct. > >> > >> -Jose > >> > >> -Original Message- > >> From: Brian Freels-Stendel [mailto:bfre...@unm.edu] > >> Sent: Tuesday, June 14, 2011 1:11 PM > >> To: dspace-tech@lists.sourceforge.net; Blanco, Jose > >> Subject: Re: [Dspace-tech] mergeing assetstores. > >> > >> Hi Jose, > >> > >> This process should work, with one thing to look out for. It's > unlikely, > >> but possible, that items might be assigned the same path in both > > assetstores. > >> Your merge process should be able to alert you about that. > >> > >> B-- > >> > > On 6/14/2011 at 9:48 AM, in message > >> > <54fa544e85d3934baa21bf8a84be5cd9171d464...@itcs-ecls-1-vs3.adsroot.itcs.umich.e > > > >> > >> u>, "Blanco, Jose" wrote: > >>> The intent of this email it to verify that merging two assetstores is > doable > > > >> > >>> in dspace. > >>> > >>> Presently we have two assetstores: > >>> > >>> assetstore.dir = /directory1 > >>> assetstore.dir.1 = /directory2 > >>> > >>> what we want to do is to merge these two onto new storage hardware. > So what > > > >> > >>> we plan to do is: > >>> > >>> 1. Merge onto the new location ( with the instance down towards the > end of > >>> the merge ) > >>> 2. Change the dspace.cfg parameter
Re: [Dspace-tech] OAI-PMH not working
Hi Keith,
looking at the documentation at
https://wiki.duraspace.org/display/DSDOC3x/OAI+2.0+Server, it looks like this
command only works if you have solr as data source.
If you have the database as data source, the command should be
[dspace]/bin/dspace oi compile-items.
Regards,
Marina
Op 16 okt. 2013, om 15:13 heeft Keith Jones het volgende geschreven:
>
> Hello,
>
> I did not realize you had to run this, but when I used the command it did not
> run, it gave me help info with the available parameters:
>
> OAI Manager Script
> Syntax: oai [parameters]
>> Possible actions:
> clean-cache - Cleans the OAI cached responses
> compile-items - Compiles all DSpace items
> erase-compiled-items - Erase the OAI compiled items
>> Parameters:
> -v Verbose output
> -h Shows this text
>
>
> On Wed, 16 Oct 2013, Muilwijk, M. (Marina) wrote:
>
>> Hi Keith,
>>
>> have you run the oai indexer recently? ([dspace]/bin/dpace oai import)
>> We recently updated to DSpace 3.2 and had to create the index again.
>>
>>
>> Regards,
>> Marina
>>
>>
>> Op 16 okt. 2013, om 14:59 heeft Keith Jones het volgende geschreven:
>>
>>>
>>> Hi,
>>>
>>> I checked the setting, we had it set for solr, but we are running solr as
>>> well. I set it to database(Postgres), stopped tomcat and restarted tomcat
>>> and I'm still not getting results.
>>>
>>> Here is our url:
>>>
>>> http://udspace.udel.edu/dspace-oai/request?verb=Identify
>>>
>>> On Wed, 16 Oct 2013, Kostas Stamatis wrote:
>>>
Hi,
DSpace 3 and above integrates xoai that uses solr indexing to display the
items. Are you using solr or Postgres/Oracle?
In the latter case, keep in mind that in the file
{...}/config/modules/oai.cfg the option "storage", at the very beginning,
must be equal to "database" and not "solr", which is the default value.
Regards,
Kostas
On Oct 15, 2013, at 6:39 PM, Keith Jones wrote:
>
>
> We have an installation of DSpace version 3.2, which I recently updated a
> test server. I'm still not able to get the OAI-PMH interface to work, has
> anyone been able to use the OAI-PMH?
> the verb identify will present an response, sets will sow but I'm not able
> to retrieve records or identifiers.
>
> Thanks
> Keith
>
>
> --
> October Webinars: Code for Performance
> Free Intel webinars can help you accelerate application performance.
> Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most
> from
> the latest Intel processors and coprocessors. See abstracts and register >
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> ___
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>>>
>>> --
>>> October Webinars: Code for Performance
>>> Free Intel webinars can help you accelerate application performance.
>>> Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most
>>> from
>>> the latest Intel processors and coprocessors. See abstracts and register >
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>>
>>
>> --
>> October Webinars: Code for Performance
>> Free Intel webinars can help you accelerate application performance.
>> Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from
>> the latest Intel processors and coprocessors. See abstracts and register >
>> http://pubads.g.doubleclick.net/gampad/clk?id
Re: [Dspace-tech] OAI-PMH not working
Hi Keith,
have you run the oai indexer recently? ([dspace]/bin/dpace oai import)
We recently updated to DSpace 3.2 and had to create the index again.
Regards,
Marina
Op 16 okt. 2013, om 14:59 heeft Keith Jones het volgende geschreven:
>
> Hi,
>
> I checked the setting, we had it set for solr, but we are running solr as
> well. I set it to database(Postgres), stopped tomcat and restarted tomcat
> and I'm still not getting results.
>
> Here is our url:
>
> http://udspace.udel.edu/dspace-oai/request?verb=Identify
>
> On Wed, 16 Oct 2013, Kostas Stamatis wrote:
>
>> Hi,
>>
>> DSpace 3 and above integrates xoai that uses solr indexing to display the
>> items. Are you using solr or Postgres/Oracle?
>> In the latter case, keep in mind that in the file
>> {...}/config/modules/oai.cfg the option "storage", at the very beginning,
>> must be equal to "database" and not "solr", which is the default value.
>>
>> Regards,
>>
>> Kostas
>>
>>
>>
>> On Oct 15, 2013, at 6:39 PM, Keith Jones wrote:
>>
>>>
>>>
>>> We have an installation of DSpace version 3.2, which I recently updated a
>>> test server. I'm still not able to get the OAI-PMH interface to work, has
>>> anyone been able to use the OAI-PMH?
>>> the verb identify will present an response, sets will sow but I'm not able
>>> to retrieve records or identifiers.
>>>
>>> Thanks
>>> Keith
>>>
>>>
>>> --
>>> October Webinars: Code for Performance
>>> Free Intel webinars can help you accelerate application performance.
>>> Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most
>>> from
>>> the latest Intel processors and coprocessors. See abstracts and register >
>>> http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk
>>> ___
>>> DSpace-tech mailing list
>>> DSpace-tech@lists.sourceforge.net
>>> https://lists.sourceforge.net/lists/listinfo/dspace-tech
>>> List Etiquette:
>>> https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
>>
>>
>> --
>> October Webinars: Code for Performance
>> Free Intel webinars can help you accelerate application performance.
>> Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from
>> the latest Intel processors and coprocessors. See abstracts and register >
>> http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk
>> ___
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>>
>
> --
> October Webinars: Code for Performance
> Free Intel webinars can help you accelerate application performance.
> Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from
> the latest Intel processors and coprocessors. See abstracts and register >
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Re: [Dspace-tech] OAI-PMH not working
Hi,
I checked the setting, we had it set for solr, but we are running solr as
well. I set it to database(Postgres), stopped tomcat and restarted tomcat
and I'm still not getting results.
Here is our url:
http://udspace.udel.edu/dspace-oai/request?verb=Identify
On Wed, 16 Oct 2013, Kostas Stamatis wrote:
> Hi,
>
> DSpace 3 and above integrates xoai that uses solr indexing to display the
> items. Are you using solr or Postgres/Oracle?
> In the latter case, keep in mind that in the file
> {...}/config/modules/oai.cfg the option "storage", at the very beginning,
> must be equal to "database" and not "solr", which is the default value.
>
> Regards,
>
> Kostas
>
>
>
> On Oct 15, 2013, at 6:39 PM, Keith Jones wrote:
>
>>
>>
>> We have an installation of DSpace version 3.2, which I recently updated a
>> test server. I'm still not able to get the OAI-PMH interface to work, has
>> anyone been able to use the OAI-PMH?
>> the verb identify will present an response, sets will sow but I'm not able
>> to retrieve records or identifiers.
>>
>> Thanks
>> Keith
>>
>>
>> --
>> October Webinars: Code for Performance
>> Free Intel webinars can help you accelerate application performance.
>> Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from
>> the latest Intel processors and coprocessors. See abstracts and register >
>> http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk
>> ___
>> DSpace-tech mailing list
>> DSpace-tech@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/dspace-tech
>> List Etiquette:
>> https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
>
>
> --
> October Webinars: Code for Performance
> Free Intel webinars can help you accelerate application performance.
> Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from
> the latest Intel processors and coprocessors. See abstracts and register >
> http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk
> ___
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>
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Re: [Dspace-tech] CRIS Installation not clear
Hi Keir, you are right the installation instructions are not so clear as need and don't include information for upgrading an existent installation. We will try to update this documentation as soon as possible, please note that, in these last weeks, much developer resources from my company has been devolved to the next DSpace 4.0 release so we are slight late with the dspace-cris upgrade. 1) mvn package from the dspace-src directory is the right way to build DSpace-CRIS 2) to install dspace-cris on top of an existent dspace installation, you need to follow the steps required for a normal dspace update (like you have done) plus execute the following sql scripts: addon-crismodule.sql, addon-crispubmed.sql, addon-subscription.sql all located in https://github.com/CILEA/DSpace/tree/dspace-cris-1.8.2.1-beta/dspace/etc/postgres These sql will create the extra tables and sequences need by the DSpace-CRIS entities. Finally, if you want to start with a preconfigured, very basic, datamodel you can proceed with the post installation instructions, i.e. load /etc/postgres/base-configuration-crismodule.sql Hope this help, Andrea Il 16/10/2013 04.00, Keir Vaughan-Taylor ha scritto: > I want to install CRIS on DSpace 1.82. In academia the package is all > the rage. I have been using install instructions from Github > > http://cilea.github.io/dspace-cris/installation.html > > The install instructions refer to unpacking the CRIS module in > [dspace-parent] > > The "mvn package" command only works for me in the > [dspace-src] directory. I can go with that but possibly that is wrong > also. > > The GIT instructions are for a fresh install with no existing database > rather than adding the module to an existing setup. > > At first I tried leaving the database intact and compiling using > "ant update" instead of "ant fresh_install". > > After which the post-install script "base-configuration-crismodule.sql" > fails (using psql) and also the CRIS module doesn't appear in the DSpace > administration. > > I tried deleting the existing database and using ant fresh_install > but still running base-configuration-crismodule.sql with psql fails. > (It tries to do inserts into non existant tables.) Again CRIS module > doesn't appear in administration tab > > Anyone know what I'm doing wrong? Any hints and tips? > > -- Andrea Bollini Dipartimento Servizi e Soluzioni per l'Amministrazione Universitaria Divisione Ricerca Via dei Tizii, 6 00185 Roma, Italy tel. +39 06 44 486 087 - mob. +39 348 82 77 525 http://www.cineca.it -- October Webinars: Code for Performance Free Intel webinars can help you accelerate application performance. Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from the latest Intel processors and coprocessors. See abstracts and register > http://pubads.g.doubleclick.net/gampad/clk?id=60135031&iu=/4140/ostg.clktrk ___ DSpace-tech mailing list DSpace-tech@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/dspace-tech List Etiquette: https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
