[Dspace-tech] Problems with the browse indexes

2015-05-21 Thread Fernando Gómez Romero
 

Hi!

We have recently upgrade to DSpace 5.1 xmlui and we are realizing of
some errors:

- Firstly, in the browse author indexes we get duplicates because the
search is being made by value and by authority for the same authors,
for example: 

http://*/xmlui/browse?authority=e026eea4-216b-4144-b3e9-ddff077244fdtype=author


http://*/xmlui/browse?value=perico+palotestype=author 

Being the two of them the same author with the same authority number. 

So I guess it is because the indexing is getting the authority field
too, I checked the dspace.cfg and I don't say anything about authority
number: 

webui.browse.index.1 = dateissued:item:dateissued
webui.browse.index.2 =
author:metadata:dc.contributor.author,dc.creator:text
webui.browse.index.3 = title:item:title
webui.browse.index.4 = subject:metadata:dc.subject.*:text 

What could be the problem? Where should I edit or what command should I
run? 

- Second thing is that meanwhile in the previous version this index was
reloaded by itself, right now we have a task that is all the time
indexing with the next commands: 

[dspace]/bin/dspace index-lucene-update 

[dspace]/bin/dspace index-discovery -o

So if I delete the task the index doesn't get the new changes. 

Could you please help me? This browse index thing is driving me nutz!!

Thank you! 

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Re: [Dspace-tech] Customization

2015-05-21 Thread Hilton Gibson
Hi Yerdaulet

Perhaps this will help you get started:
http://wiki.lib.sun.ac.za/index.php/SUNScholar/Theme

Cheers

hg

*Hilton Gibson*
Ubuntu Linux Systems Administrator
Stellenbosch University Library
http://staff.lib.sun.ac.za/~hgibson/docs/cv/cv.html


On 21 May 2015 at 06:43, Yerdaulet Absattar yabsat...@nu.edu.kz wrote:

 Hi guys,

 Could please help me with the page customization? I know that I should
 change some files in  /var/lib/tomcat7/webapps/ROOT, but where is the main
 page that contains html or xml tags?

 Kind regards,
 Yerdaulet


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Re: [Dspace-tech] Problems with the browse indexes

2015-05-21 Thread euler
Hi Fernando,

Just a hunch, maybe you should set your dspace instance to ignore authority
values. The settings can be found in
[dspace-install-dir]/config/modules/discovery.cfg. Reference here: 
https://wiki.duraspace.org/display/DSDOC5x/Discovery?src=search#Discovery-Configurationfiles
https://wiki.duraspace.org/display/DSDOC5x/Discovery?src=search#Discovery-Configurationfiles
  
Don't forget to reindex (ie dspace index-discovery -b).

Hope this helps.

Regards,
euler



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[Dspace-tech] How to translate text in Dspace 4.2 JSPUI

2015-05-21 Thread cbeltran
Hi Everybody,

I need translate texts to spanish language in my dspace installation version
4.2, interface JSPUI over centos server.

how I do?

Attached picture with text i need translate.

http://dspace.2283337.n4.nabble.com/file/n4677976/dspacetranslate.png 

Thanks.

Regards.



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Re: [Dspace-tech] eperson and groups

2015-05-21 Thread Vegard Korvald
Thank you, helix84! By using psql I could add an eperson into a group without 
any problems.

I used SELECT * FROM epersongroup  to get the IDs, but I couldn't seem to 
find the corresponding group name in the database. To find the name I had to 
look it up as an admin on our DSpace page under Access Control-Groups. Is 
there a way to find the IDs and names of the groups in the database?


--
Vegard


-Original Message-
From: ivan.ma...@gmail.com [mailto:ivan.ma...@gmail.com] On Behalf Of
helix84
Sent: Tuesday, May 19, 2015 1:15 PM
To: Vegard Korvald
Cc: dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] eperson and groups

I don't think it's doable with the currently available CLI commands in DSpace:
https://wiki.duraspace.org/display/DSDOC5x/Managing+User+Accounts


You could, however, use a CLI SQL client (psql) to manipulate membership in
the epersongroup2eperson table. You can find out the user and group IDs
from the eperson and epersongroup table, respectively.

Alternatively, assuming you're using password authentication and want to put
all users into a single group, you can use the login.specialgroup option in
[dspace]/config/modules/authentication-password.cfg. Please note that
special group membership is dynamic - it doesn't appear in the
epersongroup2eperson table, but you can check effective membership in the
profile of a logged in user.


Regards,
~~helix84

Compulsory reading: DSpace Mailing List Etiquette
https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette


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Re: [Dspace-tech] Problems with the browse indexes

2015-05-21 Thread Hilton Gibson
Hi Fernando

Could it be something to do with:
http://wiki.lib.sun.ac.za/index.php/SUNScholar/Browse_Indexes/4.X#Author_Listing_Indexes

Cheers

hg

*Hilton Gibson*
Ubuntu Linux Systems Administrator
Stellenbosch University Library
http://staff.lib.sun.ac.za/~hgibson/docs/cv/cv.html


On 21 May 2015 at 10:46, Fernando Gómez Romero tecnib...@us.es wrote:

  Hi!

 We have recently upgrade to DSpace 5.1 xmlui and we are realizing of some
 errors:

 - Firstly, in the browse author indexes we get duplicates because the
 search is being made by value and by authority for the same authors, for
 example:



 http://
 */xmlui/browse?authority=e026eea4-216b-4144-b3e9-ddff077244fdtype=author

 http://*/xmlui/browse?value=perico+palotestype=author

 Being the two of them the same author with the same authority number.



 So I guess it is because the indexing is getting the authority field too,
 I checked the dspace.cfg and I don't say anything about authority number:



 webui.browse.index.1 = dateissued:item:dateissued
 webui.browse.index.2 =
 author:metadata:dc.contributor.author,dc.creator:text
 webui.browse.index.3 = title:item:title
 webui.browse.index.4 = subject:metadata:dc.subject.*:text



 What could be the problem? Where should I edit or what command should I
 run?



 - Second thing is that meanwhile in the previous version this index was
 reloaded by itself, right now we have a task that is all the time indexing
 with the next commands:

 [dspace]/bin/dspace index-lucene-update

 [dspace]/bin/dspace index-discovery -o

 So if I delete the task the index doesn't get the new changes.





 Could you please help me? This browse index thing is driving me nutz!!

 Thank you!






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Re: [Dspace-tech] Problems with the browse indexes

2015-05-21 Thread Fernando Gómez Romero
 

Not working at all :( I still get the ?authority and the ?value as
different browse indexes. 

Thank you anyway for the answer 

Anyone knows something about it? 

---

FERNANDO GÓMEZ ROMERO
Sección de Informática y Tecnología

Tfn: 954550905
Biblioteca - Universidad de Sevilla
C/ San Fernando, 4
__

El 21/05/2015 11:45, Hilton Gibson escribió: 

 Hi Fernando 
 
 Could it be something to do with: 
 http://wiki.lib.sun.ac.za/index.php/SUNScholar/Browse_Indexes/4.X#Author_Listing_Indexes
  [4] 
 
 Cheers 
 
 hg 
 
 HILTON GIBSON 
 Ubuntu Linux Systems Administrator 
 Stellenbosch University Library
 
 http://staff.lib.sun.ac.za/~hgibson/docs/cv/cv.html [5]
 
 On 21 May 2015 at 10:46, Fernando Gómez Romero tecnib...@us.es wrote:
 
 Hi!
 
 We have recently upgrade to DSpace 5.1 xmlui and we are realizing of some 
 errors:
 
 - Firstly, in the browse author indexes we get duplicates because the search 
 is being made by value and by authority for the same authors, for example: 
 
 http://*/xmlui/browse?authority=e026eea4-216b-4144-b3e9-ddff077244fdtype=author
  
 
 http://*/xmlui/browse?value=perico+palotestype=author 
 
 Being the two of them the same author with the same authority number. 
 
 So I guess it is because the indexing is getting the authority field too, I 
 checked the dspace.cfg and I don't say anything about authority number: 
 
 webui.browse.index.1 = dateissued:item:dateissued
 webui.browse.index.2 = author:metadata:dc.contributor.author,dc.creator:text
 webui.browse.index.3 = title:item:title
 webui.browse.index.4 = subject:metadata:dc.subject.*:text 
 
 What could be the problem? Where should I edit or what command should I run? 
 
 - Second thing is that meanwhile in the previous version this index was 
 reloaded by itself, right now we have a task that is all the time indexing 
 with the next commands: 
 
 [dspace]/bin/dspace index-lucene-update 
 
 [dspace]/bin/dspace index-discovery -o
 
 So if I delete the task the index doesn't get the new changes. 
 
 Could you please help me? This browse index thing is driving me nutz!!
 
 Thank you! 
 
 --
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 Performance metrics, stats and reports that give you Actionable Insights
 Deep dive visibility with transaction tracing using APM Insight.
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 https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette [3]
 

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[4]
http://wiki.lib.sun.ac.za/index.php/SUNScholar/Browse_Indexes/4.X#Author_Listing_Indexes
[5] http://staff.lib.sun.ac.za/~hgibson/docs/cv/cv.html
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Re: [Dspace-tech] Resource policies rptype is null after upgrading

2015-05-21 Thread Ondřej Košarko
https://jira.duraspace.org/browse/DS-2587

2015-05-21 12:26 GMT+02:00 Ondřej Košarko kosa...@ufal.mff.cuni.cz:

 Hi all,

 We did an upgrade from 1.8 to 5_x and there is a trouble with the
 resourcepolicy table.

 When an item is withdrawn

 AuthorizeManager.removeAllPoliciesByDSOAndTypeNotEqualsTo(ourContext,
 this, ResourcePolicy.TYPE_CUSTOM);

 gets called, meaning the following sql gets executed

 DatabaseManager.updateQuery(c, DELETE FROM resourcepolicy WHERE 
 + resource_type_id= ? AND resource_id= ? AND rptype  ?
 ,
 o.getType(), o.getID(), type);


 But since there was no rptype in 1.8, and the upgrade process does not add
 any, the column is null and nothing is deleted, because  doesnt compare
 against null values.

 This actually means if there was an anonymous read on an item, the item is
 still visible after being withdrawn...

 I'll be filling that as a bug, but the question is what is the cleanest
 solution?
 a) adding some type
 b) modifying the query with something like ...AND (rptype  ? or rptype
 is null)
 c) ?

 Regards,
 OK

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Re: [Dspace-tech] eperson and groups

2015-05-21 Thread helix84
On Thu, May 21, 2015 at 12:22 PM, Vegard Korvald vegard.korv...@usit.uio.no
 wrote:

 I used SELECT * FROM epersongroup  to get the IDs, but I couldn't seem
 to find the corresponding group name in the database. To find the name I
 had to look it up as an admin on our DSpace page under Access
 Control-Groups. Is there a way to find the IDs and names of the groups in
 the database?


Sorry about that, I forgot to note that since DSpace 5, the epersongroup
table changed due to the metadata for all dspace objects feature. You can
get the same view on the table as in previous versions using this query
instead (6 is the constant for group):

SELECT e.*, m.text_value AS name FROM epersongroup eLEFT JOIN
metadatavalue m ON (
  m.resource_id = e.eperson_group_id
  AND m.resource_type_id = 6)



Regards,
~~helix84

Compulsory reading: DSpace Mailing List Etiquette
https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
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[Dspace-tech] Full text of an uploaded document not viewable

2015-05-21 Thread Admire Mutsikiwa
I have installed dspace 5.1 on an Ubuntu server and everything went
successfully. I can upload documents and they are committed to the archive.
My major challenge is the uploaded documents are not viewable or
downloadable when one clicks on View/Open link.

 

Any pointers on how to resolve this problem 

 

Kind Regards,

 

Admire Mutsikiwa (Mr)

ICT Manager

Libraries

University of Zimbabwe

Tel:+263-4-303276

Mob:+263782476883

 

It is easy to dodge our responsibilities, but we cannot dodge the
consequences of dodging our responsibilities.  Josiah Charles Stamp
http://www.goodreads.com/author/show/4867406.Josiah_Charles_Stamp 

 


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[Dspace-tech] Resource policies rptype is null after upgrading

2015-05-21 Thread Ondřej Košarko
Hi all,

We did an upgrade from 1.8 to 5_x and there is a trouble with the
resourcepolicy table.

When an item is withdrawn

AuthorizeManager.removeAllPoliciesByDSOAndTypeNotEqualsTo(ourContext, this,
ResourcePolicy.TYPE_CUSTOM);

gets called, meaning the following sql gets executed

DatabaseManager.updateQuery(c, DELETE FROM resourcepolicy WHERE 
+ resource_type_id= ? AND resource_id= ? AND rptype  ? ,
o.getType(), o.getID(), type);


But since there was no rptype in 1.8, and the upgrade process does not add
any, the column is null and nothing is deleted, because  doesnt compare
against null values.

This actually means if there was an anonymous read on an item, the item is
still visible after being withdrawn...

I'll be filling that as a bug, but the question is what is the cleanest
solution?
a) adding some type
b) modifying the query with something like ...AND (rptype  ? or rptype
is null)
c) ?

Regards,
OK
--
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[Dspace-tech] Now available: DSpace 5.2 release, providing bug fixes to 5.x

2015-05-21 Thread Pottinger, Hardy J.
Dear DSpace Community:
 
On behalf of the DSpace developers, I would like to formally announce
that DSpace 5.2 is now available. DSpace 5.2 is a bug-fix release and
contains no new features.
 
DSpace 5.2 can be downloaded immediately at either of the following
locations:
 
* SourceForge: https://sourceforge.net/projects/dspace/files/
* GitHub: https://github.com/DSpace/DSpace/ (see the dspace-5.2 tag)
 
In addition, you are welcome to try out DSpace 5.2 on
http://demo.dspace.org/ and continue to provide any early feedback you
may have.
 
== Fixed in 5.2 ==
 
* Solr statistics upgrade fixes:
- Resolve issues where statistics index was not being properly upgraded.
DS-2486, DS-2487, DS-2489
- Failure when sharding the Solr statistics index. DS-2212
 
* OAI fixes:
- Handle dates correctly in resumption tokens, so that harvesting captures
the full specified range. DS-2546, DS-2582
- List all authors in METS formatted metadata. DS-2474
- Change the declared OAI deletion mode to transient, which corresponds
to what DSpace actually does. DS-2491
- Restore the ability to create additional Filters for OAI-PMH interface.
DS-2423
 
* REST API fixes:
- wrong SQL in REST /items/find-by-metadata-field. DS-2501
- Listing collections would fail when using Oracle DB. DS-2508
- Correctly apply bitstream policies. DS-2511
 
* Other notable fixes:
- dspace update-handle-prefix failed when using Oracle DB. DS-2218
- Do not index items that are still in a submitter's workspace. DS-2403
- Remember the context (community, collection) during browsing. DS-2482
- Better handle upload of file with a semicolon in its name. DS-2513
- EZID DOI minting properly sets the URI of the identified item. DS-2518
- Update of the list of robots recognized by DSpace. DS-2531
 
For much more information on each of these and other fixes, please visit our
5.x Release Notes:
 
https://wiki.duraspace.org/display/DSDOC5x/Release+Notes
 
== 5.2 Documentation ==
 
The DSpace 5.x documentation is available online at:
https://wiki.duraspace.org/display/DSDOC5x/
 
A PDF copy of the documentation can also be downloaded from:
http://www.dspace.org/latest-release/
 
== 5.2 Acknowledgments ==
 
The DSpace application would not exist without the hard work and
support of the community. Thank you to the many developers who have
worked very hard to deliver all the new features and
improvements. Also thanks to the users who provided input and feedback
on the development, as well those who participated in the
testathons.
 
In particular, I'd like to single out Dr. Andrea Schweer
for her identification of various Solr statistics issues, and her
contributed fixes for those issues. Dr. Schweer also helped identify
and test many other fixes for this release, and 5.2 would not
be the same without her efforts.
 
Additionally I would like to thank Tim Donohue of DuraSpace for ensuring
that every DSpace release goes off without a hitch. Likewise, I would be
remiss if I did not mention the tireless efforts of everyone on the
DSpace 5 Release Team. I hope they don't mind me mentioning their names
one last time:
 
* Peter Dietz (Longsight)
* Hardy Pottinger (University of Missouri Library Systems)
* Ivan Masár
* Mark H. Wood (Indiana University)
* Robin Taylor (University of Edinburgh)
* Pascal-Nicolas Becker (Technische Universität Berlin)
* Andrea Schweer (Library Consortium of New Zealand)
 
A detailed listing of all known people/institutions who contributed
directly to DSpace 5.2 is available in the Release Notes. If you
contributed and were accidentally not listed, please let us know so
that we can correct it!
 
For DSpace 5.2, we had a total of 22 individuals contribute bug fixes.
A big thanks goes out to everyone who participated. We hope you'll
continue to be a valuable addition to the DSpace community for the
next release and beyond!
 
== More Information ==
 
More information on this release is also available in the DSpace 5.2
Release Notes at:
 
https://wiki.duraspace.org/display/DSDOC5x/Release+Notes
 
As always, we are happy to hear back from the community about DSpace.
Please let us know what you think of 5.2!
 
Hardy Pottinger, on behalf of the DSpace 5.2 Release Team, and all the
DSpace developers. 
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[Dspace-tech] Database upgrade error step 10 - 11

2015-05-21 Thread Lewatle Phaladi
Hi All,

I have got the following error messages after upgrading my DSpace application 
while I was doing step 10 -11 of 
https://wiki.duraspace.org/display/DSDOC5x/Upgrading+DSpace
inside my dspace.cfg I have put DB Driver as follows like I was doing it with 
DSpace 3.2 but on error message I can see it comes as one of things to worry 
about :
db.driver = org.postgresql.Driver
any idea is much appreciated.


dspace@dspacetest:~/runtime$ ../install/dspace5.1/bin/dspace database info
Caught exception:
java.sql.SQLException: java.lang.ClassNotFoundException: db.driver = 
org.postgresql.Driver
at 
org.dspace.storage.rdbms.DataSourceInit.getDatasource(DataSourceInit.java:171)
at 
org.dspace.storage.rdbms.DatabaseManager.initDataSource(DatabaseManager.java:1440)
at org.dspace.storage.rdbms.DatabaseUtils.main(DatabaseUtils.java:83)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at 
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at 
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at 
org.dspace.app.launcher.ScriptLauncher.runOneCommand(ScriptLauncher.java:225)
at org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:77)
Caused by: java.lang.ClassNotFoundException: db.driver = org.postgresql.Driver
at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:331)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:264)
at 
org.dspace.storage.rdbms.DataSourceInit.getDatasource(DataSourceInit.java:41)
... 8 more



dspace@dspacetest:~/runtime$ ../install/dspace5.1/bin/dspace database migrate
Caught exception:
java.sql.SQLException: java.lang.ClassNotFoundException: db.driver = 
org.postgresql.Driver
at 
org.dspace.storage.rdbms.DataSourceInit.getDatasource(DataSourceInit.java:171)
at 
org.dspace.storage.rdbms.DatabaseManager.initDataSource(DatabaseManager.java:1440)
at org.dspace.storage.rdbms.DatabaseUtils.main(DatabaseUtils.java:83)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at 
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at 
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at 
org.dspace.app.launcher.ScriptLauncher.runOneCommand(ScriptLauncher.java:225)
at org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:77)
Caused by: java.lang.ClassNotFoundException: db.driver = org.postgresql.Driver
at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:331)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:264)
at 
org.dspace.storage.rdbms.DataSourceInit.getDatasource(DataSourceInit.java:41)
... 8 more

Regards,
Lewatle

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Re: [Dspace-tech] Some items are never in search results [Dspace 3.2, SOLR]

2015-05-21 Thread Alcides Carlos de Moraes Neto
So, I figured these are permission groups, the number is the database ID
for the epersongroup table.

I had to add the Administrator group (id 1) to the group 451. Should this
really be necessary? Shouldn't the admin group see all items, every time?

2015-05-20 15:00 GMT-03:00 Alcides Carlos de Moraes Neto 
alcides.n...@gmail.com:

 Hello all,

 We recently submitted 228 items to our dspace install.
 But only 215 show in search results and browse pages (both use
 Discovery/SOLR).

 Rebuilding the index did not solve the problem (update-discovery-index  -b)

 Querying SOLR directly, I can get the 13 missing items.

 Checking the logs, I found this filter query that dspace sends to SOLR,
 with several g### values for attribute read:

 read:(g0 OR e1 OR g0 OR g1 OR g262 OR g315 OR g314 OR g317 OR g316 OR g319
 OR g318 OR g343 OR g342 OR g341 OR g340 ...[snip]... OR g449) OR (!read[*
 TO *])

 What are these values? I figured the 13 items are not showing in search
 results because they have g450 and g451 for their read values.


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