[ECOLOG-L] Course: Mixed modelling (with intro MCMC)

2013-10-24 Thread Highland Statistics Ltd

We would like to announce the following stats course;

Course: Introduction to MCMC, Linear mixed effects models and GLMM with R
When: 20-24 January, 2014
Where: Bangor University, UK
Info: http://www.highstat.com/statscourse.htm
Flyer: http://www.highstat.com/Courses/Flyer2014_02Bangor.pdf

Kind regards,

Alain

--
Dr. Alain F. Zuur
First author of:

1. Analysing Ecological Data (2007)
2. Mixed effects models and extensions in ecology with R (2009)
3. A Beginner's Guide to R (2009)
4. Zero Inflated Models and GLMM with R (2012)
5. A Beginner's Guide to GAM (2012)
6. A Beginner's Guide to GLM and GLMM (2013)

Highland Statistics Ltd.
6 Laverock road
UK - AB41 6FN Newburgh
Tel: 0044 1358 788177
Email: highs...@highstat.com
URL: www.highstat.com
URL: www.brodgar.com


[ECOLOG-L] Graduate program in plant biology and conservation at Northwestern University

2013-10-24 Thread Daniel Larkin
PLANT BIOLOGY AND CONSERVATION
 
The Graduate Program in Plant Biology and Conservation is a collaboration
between Northwestern University (NU) and the Chicago Botanic Garden (CBG).
Both MS and PhD degrees are offered. This year a new internship-based MS
program in land management and conservation is being offered. The programs
offer a unique opportunity to study ecology, evolution, and environmental
issues at the interface of basic and applied plant science. Students apply
to the program through Northwestern University and take their courses at
both NU and CBG with faculty from both institutions. The Plant Conservation
and Science Center at CBG is a tremendous resource for students, and the
Chicago region provides an excellent community at the forefront of research
in conservation and sustainability. Faculty research areas include:
 
Climate Change
Conservation Genetics
Crop Evolution and Diversity
Invasion Biology
Paleobotany, Paleoecology, and Paleoclimate
Phylogenomics
Plant Animal Interactions
Plant Demography
Plant Reproductive Ecology
Plant and Fungal Systematics and Evolution
Restoration Ecology
Soil Ecology and Fungal Diversity
 
To learn more, contact the program director, Nyree Zerega
(nzer...@chicagobotanic.org) or visit our websites:
Graduate Program: http://www.plantbiology.northwestern.edu/
Plant Science Center:
http://www.chicagobotanic.org/research/labs.php?expanddiv=plant_conservation
 
Application deadlines:
PhD: December 31, 2013
MS (thesis-based): February 15, 2014
MS (internship-based): Applications will be reviewed beginning February 15
and review will continue through April 30, 2014. Admissions are on a rolling
basis.


[ECOLOG-L] Grad Student Opportunities in Global Change Ecology and Stable Isotope Biogeochemistry

2013-10-24 Thread Wendy H. Yang
The Yang Lab (https://sib.illinois.edu/yang) in Global Change Ecology and
Stable Isotope Biogeochemistry in the Departments of Plant Biology and
Geology at the University of Illinois, Urbana-Champaign seeks creative and
motivated graduate students to join the lab in Summer/Fall 2014. We
explore how human activities are changing how natural and managed
ecosystems function and how ecosystem responses to global change can
feedback to drive or slow future global change. We are particularly
interested in the controls on greenhouse gas emissions, the effects of
nitrogen deposition on ecosystem nitrogen retention and loss, the effects
of plant community composition shifts on ecosystem nitrogen and carbon
dynamics, and the coupling of biogeochemical cycles beyond carbon and
nitrogen. Students will be encouraged to develop their own research
related to these themes. Potential local field sites include SoyFACE, the
Energy Biosciences Institute Energy Farm, the Woody Perennial Polyculture
research site, the Bondville Ameriflux site, and the Upper Sangamon Basin
which is part of the Intensively Managed Landscapes Critical Zone
Observatory. Prospective students are also encouraged to consider applying
for the IGERT program in Vertically Integrated Training with Genomics
(http://www.igb.illinois.edu/vintg/igert), which provides the opportunity
to develop research at the Smithsonian Tropical Research Institute in
Panama.

There are multiple opportunities to join the lab to pursue a Master’s or
Ph.D. degree:
(1) Department of Plant Biology
(http://www.life.illinois.edu/plantbio/index.html) – Deadline January 1
(2) Department of Geology (http://www.geology.illinois.edu/) – Deadline
January 15
(3) Program in Ecology, Evolution, and Conservation Biology
(http://sib.illinois.edu/peec/) – Deadline January 1

If you are interested in joining the lab, please email Dr. Wendy Yang at
ya...@illinois.edu. Please include a brief statement of your research
interests and your CV.

~~~
Wendy H. Yang, Ph.D.
Assistant Professor
Departments of Plant Biology and Geology
University of Illinois, Urbana-Champaign
265 Morrill Hall
505 S Goodwin Ave
Urbana, IL 61801

Lab/Office: 639 Morrill Hall
Office phone: 217-244-2614


[ECOLOG-L] Graduate Student Opportunities in Evolutionary Biology at Arizona State University

2013-10-24 Thread Nico Franz
Graduate Student Opportunities in Evolutionary Biology at Arizona State
University

The School of Life Sciences (SoLS) at Arizona State University
(https://sols.asu.edu/) is recruiting outstanding graduate student
applicants in Evolutionary Biology. Located in the Valley of the Sun in
Tempe, Arizona, SoLS houses a broad group of more than 100 faculty and 250
graduate students engaged in cutting-edge research across the spectrum of
biological sciences. As one of the top research institutions in the country,
we offer diverse opportunities for graduate training – largely tailored to a
student's individual interests and background.

Evolutionary Biology is a growing interdisciplinary graduate degree program
that offers Ph.D.-level training in the historical, conceptual, empirical,
and quantitative aspects of biological evolution. The program is supported
by a diverse faculty affiliated with numerous science units across the
university (see
https://sols.asu.edu/graduate-studies/degrees/evolutionary-biology/faculty).
It provides bridges between temporal and spatial scales, allows integration
of information and patterns across levels of organization, and informs the
theoretical foundations of subfields ranging from population genetics to
systematics to ecosystem ecology. 

Student training opportunities range from unit-based programs such as those
in the School of Life Sciences and the School of Human Evolution and Social
Change (https://shesc.asu.edu/), to collaborations with major ASU research
institutes and centers  including the Institute for Human Origins
(http://iho.asu.edu/), the Center for Social Dynamics and Complexity
(https://csdc.asu.edu/), the International Institute for Species Exploration
(http://species.asu.edu/), the Center for Biology and Society
(https://cbs.asu.edu/), and the Center for Evolutionary Medicine and
Informatics (http://www.biodesign.asu.edu/research/research-centers). School
of Life Sciences Ph.D. students receive a minimum of five years guaranteed
funding through research and teaching fellowships.

The application deadline for entry in the Fall semester of 2014 is December
15, 2013. Information about how to apply is available at
https://sols.asu.edu/graduate-studies/degrees/evolutionary-biology/process.

We strongly encourage prospective candidates to explore the breadth of our
research activities on-line and contact specific faculty members prior to
submitting an application. General questions regarding the Ph.D. program in
Evolutionary Biology may be addressed to Drs. Michael Rosenberg
(m...@asu.edu) or Nico Franz (nico.fr...@asu.edu).

Submitted by Nico Franz
http://taxonbytes.org/


[ECOLOG-L] Call for contributions: Take the Biodiversity Challenge

2013-10-24 Thread Fletcher Halliday
A few months ago, Sharon Baruch-Mordo posted a provocative challenge 
(http://bit.ly/12mfSPs) on 
BioDiverse Perspectives (www.BioDV.com), a student run blog that writes about 
biodiversity research. 
She called it the biodiversity challenge and offered it as an opportunity to 
engage the public - an 
opportunity to speak to non-scientists about our work and to convince them that 
they should care 
about it. 

Here’s the challenge (posted in full here: http://bit.ly/1ae9UBG):
Write a 500-word essay for a newspaper or magazine about the importance of your 
research in the 
context of biodiversity and conservation. Your target audience is the general 
public and your goal is 
to be educational and convincing. 

Next week, we’ll be posting submissions to the biodiversity challenge at 
BioDiverse Perspectives, and 
we challenge you to join in. You can upload it on the website at 
www.biodiverseperspectives.com/contribute or email it to us at 
i...@biodiverseperspectives.com. We 
will publish them all next week, in full, as we receive them, unedited in all 
their glory. 

Thanks, and I look forward to reading your contributions!

Fletcher Halliday
Editor-in-chief: BioDiverse Perspectives
PhD Student: UNC Chapel Hill
www.BioDV.com


[ECOLOG-L] Job: Trout Unlimited - Fisheries Data Specialist

2013-10-24 Thread Dan Dauwalter
Title:  Fisheries Data Specialist (11 month term)
Reports To: Fisheries Scientist
Dept: Science   
FLSA: Exempt

About Trout Unlimited 
Today, Trout Unlimited is a national organization with more than 150,000 
volunteers organized into about 400 chapters nationwide. This dedicated 
grassroots army is matched by a respected staff of organizers, lawyers, 
policy experts and scientists, who work out of more than 30 offices. Our 
mission is to conserve, protect and restore North America's cold-water 
fisheries and their watersheds.  

Position Summary 
Trout Unlimited’s science team anticipates hiring a Fisheries Data 
Specialist to be based in Boise, ID, as part of a NASA-funded project to 
develop broad-scale population and genetic models of population viability in 
trout. The person hired for this position will be responsible for 
assembling, managing, and analyzing fish abundance and genetics data, as 
well as assembling and manipulating spatial datasets using a geographic 
information system (GIS). Occasional travel to adjacent states to work with 
collaborators may be required. There may be limited opportunities for field 
work on related projects, but 95% of work time will be spent in an office. 
This is an 11-month term position with the possibility of a one-year 
renewal. Salary is $35,000 per year plus health benefits (Medical, Dental 
and Vision). 

Duties and Responsibilities 
•   Assemble and organize database of fish collections
•   Calculate fish abundances from count data
•   Assemble and organize a database of fish movement barriers
•   Use a geographic information system (GIS) to map data
•   Assemble and organize fish genetics data
•   Assist in data analysis
•   Assist on related projects as needed


Qualifications
•   Bachelors of Science in a natural resources related field. Master’s 
degree preferred.
•   Experience in database development and management using Filemaker, 
Access, SQL, or other platforms.
•   Experience in data manipulation and analysis, preferably in R.
•   Experience with GIS.
•   Knowledge of fish sampling techniques and methods of estimating 
population abundance preferred.
•   Excellent attention to detail.
•   Knowledge of population viability analysis, distribution modeling 
and population genetics is a plus.

How to Apply
Please send a letter of interest, resume, and 3 professional 
references(names, phone numbers, e-mail addresses, and relation to 
applicant). If possible, please combine all in one PDF and send by email 
with “Fisheries Data Specialist” in the subject line to: Dan Dauwalter, 
Fisheries Scientist, ddauwalter at tu.org. Review of applications will begin 
November 4th, 2013 and continue until a suitable candidate is found.  

TU is an Equal Employment Opportunity  Affirmative Action Employer pursuant 
to Section 503 of the Rehabilitation Act  Vietnam Era Veterans Readjustment 
Assistant Act. TU hires staff without regard to race, color, religion, 
national origin, age, gender, sexual orientation, marital status or 
disability.


[ECOLOG-L] Instructional assistantship plus Research assistantship for MS on hormones and behavior in salamanders

2013-10-24 Thread Caitlin Gabor
Instructional assistantship plus Research assistantship for MS on hormones
and behavior in salamanders

Applications are being sought from students with grit and optimism that wish
to pursue a Masters degree in Conservation and Population Biology. Students
should also have both curiosity and zest about anthropogenic affects on
behavior and hormones in salamanders. I have 3 months of summer funding to
examine the effect of captive rearing on stress and reproductive hormones in
Barton Springs salamanders, Eurycea sosorum. I am hoping for this project to
jump start study questions about anthropogenic impacts on predator-prey
interactions or other relevant behavioral and hormonal changes. 

You can read more about work in our lab and research interests here
http://gabor.wp.txstate.edu/. 

The Department of Biology offers a strong environment for training students
in conservation and evolutionary ecology. The Masters program in
Conservation and Population Biology would be the best fit for such an
applicant. For more information on the Population and Conservation Biology
program see
http://www.bio.txstate.edu/Graduate-Programs/pop-and-con-biology.html. For
more information on admissions see
http://www.bio.txstate.edu/Graduate-Programs/pop-and-con-biology/how-to-apply.html.


Interested students should send an email with a statement of interest that
includes a summary of why you are interested in working on this project, as
well broadly discussing your research interests. Preference will be given to
a student who can start Spring 2014. Please include a copy of your CV,
relevant coursework, GRE, and any other relevant experience to Caitlin Gabor
by email (gabor at txstate.edu). Reference letters for top candidates will
be solicited at a later date. Applications will be reviewed as they come in.
Applications to our Masters program are evaluated on a rolling basis so it
is still possible to start January 2014.


[ECOLOG-L] Call for contributions: Take the Biodiversity Challenge

2013-10-24 Thread Fletcher Halliday
A few months ago, Sharon Baruch-Mordo posted a provocative challenge (
http://bit.ly/12mfSPs) on BioDiverse Perspectives (http://www.BioDV.com), a
student run blog that writes about biodiversity research. She called it the
biodiversity challenge and offered it as an opportunity to engage the
public - an opportunity to speak to non-scientists about our work and to
convince them that they should care about it.



Here’s the challenge (posted in full here: http://bit.ly/1ae9UBG):**

*Write a 500-word essay for a newspaper or magazine about the importance of
your research in the context of biodiversity and conservation. Your target
audience is the general public and your goal is to be educational and
convincing. *



Next week, we’ll be posting submissions to the biodiversity challenge at
BioDiverse Perspectives, and we challenge you to join in. You can upload it
on the website at www.biodiverseperspectives.com/contribute or email it to
us at i...@biodiverseperspectives.com. We will publish them all next week,
in full, as we receive them, unedited in all their glory.



Thanks, and I look forward to reading your contributions!


-

Fletcher Halliday

Editor-in-chief: BioDiverse Perspectives

PhD Student: UNC Chapel Hill

www.BioDV.com http://www.biodv.com/


[ECOLOG-L] Fisheries opportunities at UCSB

2013-10-24 Thread Katie Nichols
Title: Fisheries Scientist
Job Description: The Sustainable Fisheries Group (SFG) at the University of 
California, Santa Barbara seeks up to two fisheries scientists to explore 
innovative solutions to challenges in fisheries, marine resource management 
and conservation. The fisheries scientist(s) will be responsible for leading 
both theoretical work and applied analyses with partners related to diverse 
projects around the world including California, Latin America, the Indo-
Pacific and the Caribbean. 
Qualifications: 
• Master’s or PhD in fisheries science, marine ecology or closely related 
field
• Strong background in fisheries science and excellent quantitative, 
statistical and modeling skills. 
• 2-5 years experience developing models related to stock assessment, 
spatial fisheries management, fishery sustainability, and/or marine spatial 
planning.  
• Innovative analytical problem solving skills with the ability to generate 
new ideas and solutions.
• Excellent oral and written communication skills, including ability to 
interface with partners and develop peer-reviewed scientific publications 
and presentations.
Salary and Benefits: 100% time appointment for one year from start date, 
with strong possibility for additional year(s) of employment contingent upon 
performance and funding. Start date is negotiable but ideally would be at 
the end of 2013 or early 2014. Salary is competitive and commensurate with 
the applicant’s qualifications; full benefits package included.  
To Apply: Please submit letter of interest, CV, and contact information for 
3 references, to https://recruit.ap.ucsb.edu/apply/JPF00264. Position will 
remain open until filled, but application review will commence on November 
21, 2013.


Title: Researcher/Coordinator
Job Description: The Sustainable Fisheries Group (SFG) at the University of 
California, Santa Barbara seeks an outstanding researcher to support a 
partnership with the Waitt Institute focused on collaborations with local 
governments and communities to create comprehensive ocean zoning and 
fisheries management solutions that empower communities to restore their 
oceans to full productivity. The researcher will be responsible for leading 
economic analyses and biological assessments of marine resources, conducting 
literature reviews and synthesis in fisheries, ecology and natural resource 
economics, and running bioeconomic models and tradeoff analyses in order to 
provide scientific input to multi-use marine spatial planning initiatives.
Qualifications: 
• Master’s or PhD in marine biology, ecology, natural resource economics, 
fishery science or related field
• Excellent quantitative, statistical and modeling skills including 
experience using models related to spatial fisheries management, stock 
assessment, fishery sustainability, and/or marine spatial planning 
• Proficiency with R and/or Matlab required; familiarity with GIS preferred
• Experience conducting literature reviews, literature and data synthesis, 
and economic valuation of natural resources
• Excellent skills in oral and written communication and coordination, 
including ability to interface with partners, coordinate with part-time 
research assistants, and develop reports and presentations for diverse 
audiences. Interest in and experience writing peer-reviewed scientific 
publications is a plus. 
• Willingness to travel internationally (most likely to the Caribbean)
Salary and Benefits: 100% time appointment for one year from start date, 
with strong possibility for additional year(s) of employment contingent upon 
performance and funding. Start date is negotiable but ideally would be at 
the end of 2013 or in the first quarter of 2014. Salary is competitive and 
commensurate with the applicant’s qualifications; full benefits package 
included.  
To Apply: Please submit letter of interest, CV, and contact information for 
3 references, to https://recruit.ap.ucsb.edu/apply/JPF00265. Position will 
remain open until filled, but application review will commence on November 
24, 2013.


[ECOLOG-L] Pennsylvania State University- M.S. Graduate Assistantship

2013-10-24 Thread John Tooker
A research assistantship is available for a M.S. student interested in 
investigating greenhouse gas 
emissions and soil carbon dynamics within a sustainable dairy forage cropping 
system, beginning in 
the Spring or Fall 2014 semesters.  The objective of the project is to 
determine if reduced nitrogen 
fertilizer additions, in response to innovative crop rotations and manure 
management, result in 
reduced greenhouse gas emissions and increased soil carbon sequestration.  The 
research will 
primarily focus on field measurements and laboratory analysis. The student will 
work jointly with the 
Penn State University College of Agriculture Sciences and the USDA-Agricultural 
Research Service at 
University Park, PA. The assistantship is a half-time appointment with full 
tuition compensation. A 
description of the sustainable dairy forage cropping system project is 
available at: 
http://plantscience.psu.edu/research/areas/crop-ecology-and-management/cropping-systems

Applications should have a BS in an agricultural, environmental, life, or 
physical science field. 
Interested applicants should contact Dr. Curtis Dell (curtis.d...@ars.usda.gov, 
814-863-0984), Dr. 
Heather Karsten (h...@psu.edu, 814-863-3179), or Dr. Doug Beegle (d...@psu.edu, 
814-863-
1016). Application materials for the Penn State graduate program in Soil 
Science or Agronomy are 
available at 
http://ecosystems.psu.edu/graduateprograms/soil-science/masters/procedures-for-
admission and 
http://plantscience.psu.edu/graduateprograms/agronomy/masters/procedures-for-
admission.


[ECOLOG-L] Garden Club of America pollinator fellowship

2013-10-24 Thread David Inouye
For a graduate student to study causes of pollinator decline.  See 
http://pollinator.org/GCAfellowship.htm for more information.


$4,000, deadline 1 February 2014.