Re: [O] Using Variable Width Fonts for org-mode and Fixed Width forTabless
Hi Ian,
li...@wilkesley.net writes:
I am struggling to get this to work. In my init files I have:
(set-default-font DejaVu Serif Italic)
I have followed the advice on StackOverflow
http://stackoverflow.com/questions/3758139/variable-pitch-for-org-mode-fixed-pitch-for-tables
and customized my Init file to include:
(set-face-attribute 'org-table nil :inherit 'fixed-pitch)
However, table formatting is still screwed up. C-u C-x = shows
xft:-unknown-IM FELL DW
Pica-normal-italic-normal-*-15-*-*-*-*-0-iso10646-1 (#x29)
Character code properties: customize what to show
name: LATIN CAPITAL LETTER F
general-category: Lu (Letter, Uppercase)
decomposition: (70) ('F')
There are text properties here:
face org-table
fontifiedt
line-prefix [Show]
wrap-prefix [Show]
I have tried setting the font for org-table using Emacs Customize
Interface, but without any success. Ideally I want tables to use a
monospace font like Inconsolata or DejaVu mono. Can anyone provide an
example of how to set org-table to use a specified fixed width font.
I've played a little with this, and here is what I have (straight from
my config file).
First, I set up the font for variable pitch, and I tell emacs to use it
for text modes.
** setup
#+BEGIN_SRC emacs-lisp
(set-face-attribute 'variable-pitch nil :family Ubuntu)
(set-face-attribute 'variable-pitch nil :height 140)
(add-hook 'text-mode-hook 'variable-pitch-mode)
#+END_SRC
Then I set up exceptions for some faces in some modes. I have exceptions
for info, mu4e, and org mode. Here are the ones for org mode.
** org
from
http://yoo2080.wordpress.com/2013/05/30/monospace-font-in-tables-and-source-code-blocks-in-org-mode-proportional-font-in-other-parts/
#+BEGIN_SRC emacs-lisp
(defun my-adjoin-to-list-or-symbol (element list-or-symbol)
(let ((list (if (not (listp list-or-symbol))
(list list-or-symbol)
list-or-symbol)))
(require 'cl-lib)
(cl-adjoin element list)))
(mapc
(lambda (face)
(set-face-attribute
face nil
:inherit
(my-adjoin-to-list-or-symbol
'fixed-pitch
(face-attribute face :inherit
(list 'org-code 'org-block 'org-table 'org-block-background 'org-date
'org-link 'org-footnote))
#+END_SRC
What this says is: use fixed-pitch for the faces in the list at the
end. I have to include dates, links, and footnotes because I use them in
tables and I don't know how to conditionally change a face (i.e., use
fixed-pitch for links in tables but not for links in other places).
Hopefully this will work for you.
Alan
Re: [O] Lots of \n in ox-html output
Hello, Thorsten Jolitz tjol...@gmail.com writes: although I did not update recently, html-export of this test org-file suddenly includes lots of \n in the html output. I cannot reproduce it. Does it also happen with a minimal configuration file? Regards, -- Nicolas Goaziou
[O] Exploring data that is in org-mode format
Hello, This question is slightly off-topic, but it may be of interest to people who have a lot of data entered in org-mode. The short version: what tools are available to explore data, typically stored in org-mode tables? The long version: I've tried an interesting website (https://tictrac.com/) whose goal is to gain some insight about ourselves by exploring some data we collect (think quantified self). I'm not happy with this site for three reasons: - I need to send it the data; - it focuses on health / activity data whereas there is much more that interests me (I for instance have weekly records of natural gas use in my gas-heated house and daily record of temperature average outside which I would love to compare); - it won't let you input arbitrary data (I asked about importing a CSV of my daily coffee consumption, they answered they require an external service to integrate the data). So I collect all this data because it's something I enjoy doing, and I would really like to explore it, from the comfortable position of my own computer. All of this data is in org-mode tables (or can be easily converted to org-mode table). Hence my questions: are there tools you would recommend? I'm not afraid of programming (I suspect an answer will be 'R'), but I would like pointers to tutorials to do these kind of things. The kind of things I would like to do are: - extract weekly or monthly tallies or estimation from data collected at irregular intervals; - compare data sources against each other; - estimate future trends based on past data (how much will my gas bill be?); - display the result in some kind of dashboard. Thanks a lot, Alan
[O] Special characters in tables (iso-latin-1 or utf-8)
Greetings. A lot of my tables contain special characters (such as ä and ö) because those are used in Finnish names. These are now causing problems for me in table formulas. Can someone tell me how to fix the table below so that the formula will work? * testing table | string | same string | |+-| | abc| abc | | smörre | #ERROR | #+TBLFM: $2=$1 When I open a new org-file and type special characters in it, the default encoding seems to be iso-latin-1; changing this to utf-8 has not helped. All the best, Jarmo
Re: [O] Exploring data that is in org-mode format
Dnia 2013-09-27, o godz. 10:18:15 Alan Schmitt alan.schm...@polytechnique.org napisał(a): Hello, This question is slightly off-topic, but it may be of interest to people who have a lot of data entered in org-mode. The short version: what tools are available to explore data, typically stored in org-mode tables? The long version: I've tried an interesting website (https://tictrac.com/) whose goal is to gain some insight about ourselves by exploring some data we collect (think quantified self). I'm not happy with this site for three reasons: - I need to send it the data; - it focuses on health / activity data whereas there is much more that interests me (I for instance have weekly records of natural gas use in my gas-heated house and daily record of temperature average outside which I would love to compare); - it won't let you input arbitrary data (I asked about importing a CSV of my daily coffee consumption, they answered they require an external service to integrate the data). So I collect all this data because it's something I enjoy doing, and I would really like to explore it, from the comfortable position of my own computer. All of this data is in org-mode tables (or can be easily converted to org-mode table). Hence my questions: are there tools you would recommend? I'm not afraid of programming (I suspect an answer will be 'R'), but I would like pointers to tutorials to do these kind of things. The kind of things I would like to do are: - extract weekly or monthly tallies or estimation from data collected at irregular intervals; - compare data sources against each other; - estimate future trends based on past data (how much will my gas bill be?); - display the result in some kind of dashboard. Thanks a lot, Interesting question. And although it is probably of no use for me, I'd love to see an Emacs-based tool to do that... Alan Best, -- Marcin Borkowski http://octd.wmi.amu.edu.pl/en/Marcin_Borkowski Adam Mickiewicz University
Re: [O] Exploring data that is in org-mode format
* Alan Schmitt alan.schm...@polytechnique.org wrote: Hello, Hi Alan! The short version: what tools are available to explore data, typically stored in org-mode tables? Great question! I did some very basic R-scripts to derive boxplots by myself. The long version: I've tried an interesting website (https://tictrac.com/) whose goal is to gain some insight about ourselves by exploring some data we collect (think quantified self). I'm not happy with this site for three reasons: - I need to send it the data; I dislike cloud-based services which are not under my control. - it focuses on health / activity data whereas there is much more that interests me (I for instance have weekly records of natural gas use in my gas-heated house and daily record of temperature average outside which I would love to compare); Absolutely! - it won't let you input arbitrary data (I asked about importing a CSV of my daily coffee consumption, they answered they require an external service to integrate the data). I understand. So I collect all this data because it's something I enjoy doing, and I would really like to explore it, from the comfortable position of my own computer. All of this data is in org-mode tables (or can be easily converted to org-mode table). Hence my questions: are there tools you would recommend? I'm not afraid of programming (I suspect an answer will be 'R'), but I would like pointers to tutorials to do these kind of things. The kind of things I would like to do are: - extract weekly or monthly tallies or estimation from data collected at irregular intervals; - compare data sources against each other; - estimate future trends based on past data (how much will my gas bill be?); - display the result in some kind of dashboard. I collect much data about myself using Memacs (see signature). However, I did not derive anything else but some boxplots from it (visualizing time-differences between periodic events). Something generic which I can feed Org-mode files (most preferably in Memacs-like Org-mode format) and derive some standard graphics (where I pick those that make sense) would be very great! -- mail|git|SVN|photos|postings|SMS|phonecalls|RSS|CSV|XML to Org-mode: get Memacs from https://github.com/novoid/Memacs https://github.com/novoid/extract_pdf_annotations_to_orgmode + more on github
Re: [O] Special characters in tables (iso-latin-1 or utf-8)
Hi Jarmo On Fri, Sep 27, 2013 at 10:21 AM, Jarmo Hurri jarmo.hu...@syk.fi wrote: | string | same string | |+-| | abc| abc | | smörre | #ERROR | #+TBLFM: $2=$1 A lisp formula is the easiest way to just copy fields: #+TBLFM: $2 = '(identity $1) See also the ERT test-org-table/copy-field in testing/lisp/test-org-table.el: http://orgmode.org/w/org-mode.git?p=org-mode.git;a=blob_plain;f=testing/lisp/test-org-table.el Michael
[O] [Bug?] Search string NOT interpreted as individual parts
Hello, I've observed, with the following minimal Org configuration, --8---cut here---start-8--- (require 'org) (define-key global-map (kbd C-c a) 'org-agenda) (setq org-agenda-files '(~/ecm.org)) ;; turn on individual word search (setq org-agenda-search-view-always-boolean t org-agenda-search-view-search-words-only t) ;; match part of a word (setq org-agenda-search-view-force-full-words nil) --8---cut here---end---8--- that the search string is: - WELL interpreted as individual parts for `C-c a s', but - NOT interpreted as individual parts for `C-c / /' inside the document itself You can see (on http://screencast.com/t/JkjcirV2DZ) that the following ECM document is found when searching `C-c a s histo entre RET'. --8---cut here---start-8--- #+TITLE: ECM #+LANGUAGE: fr * Opérations ** TODO Ajouter l'historique de l'entreprise La question Historique de l'entreprise bon ou pas ? est inutile dans le processus... Intégrer l'*historique PFI de l'entreprise* pour vérifier que ... ** TODO Historique ** TODO Entreprise --8---cut here---end---8--- But, when inside the document, - `C-c / / histo entre RET' FAILS - `C-c / / historique entreprise RET' FAILS - `C-c / / historique de l'entreprise RET' works - `C-c / / rique de l'entreprise RET' works That is: - (setq org-agenda-search-view-always-boolean t) is only honored for `C-c a s', NOT for `C-c / /' - (setq org-agenda-search-view-force-full-words nil) is honored for both `C-c a s' and `C-c / /' Best regards, Seb -- Sebastien Vauban
Re: [O] Lots of \n in ox-html output
Nicolas Goaziou n.goaz...@gmail.com writes: Hello, Thorsten Jolitz tjol...@gmail.com writes: although I did not update recently, html-export of this test org-file suddenly includes lots of \n in the html output. I cannot reproduce it. Does it also happen with a minimal configuration file? It must be something emacsclient/server related, since it does not happen when I call (pseudocode): ,--- | emacs -Q -l init.el -e org-export- ... `--- but does happen with ,-- | emacs -Q --daemon=myserver -l init.el | emacsclient -e org-export-... `-- where init.el does _nothing_ but setting load-path and requiring the necessary libs. Does emacsclient behave different w.r.t to encoding line-endings or so? -- cheers, Thorsten
Re: [O] [PATCH] [org-table] user-chosen separator in org-table-convert-region
On Tue, 24 Sep 2013 15:08:10 +0200, Carsten Dominik
carsten.domi...@gmail.com wrote:
could you please explain what this does and show an example on how
this should be used?
It adds the possibility of a string argument used as a regexp for
arbitrary field separator.
It can be used as following :
(defun my-fjd/convert (beg0 end0 arg)
(interactive r\nsSeparator: )
(let* ((beg (min beg0 end0))
(end (max beg0 end0))
re)
(org-table-convert-region beg0 end0 arg)
))
(global-set-key (kbd f5T) 'my-fjd/convert)
It permits for example to convert in place csv-like table with
semi-colon separator if I pass ; as argument.
I modified the patch to add correct documentation in the function.
---
lisp/org-table.el |3 +++
1 file changed, 3 insertions(+)
diff --git a/lisp/org-table.el b/lisp/org-table.el
index 246cf8d..4883fc6 100644
--- a/lisp/org-table.el
+++ b/lisp/org-table.el
@@ -548,6 +548,7 @@ (defun org-table-convert-region (beg0 end0
optional separator)
'(4) Use the comma as a field separator
'(16)Use a TAB as field separator
integer When a number, use that many spaces as field separator
+string When a string, use it as a regexp for field separator
nil When nil, the command tries to be smart and figure out the
separator in the following way:
- when each line contains a TAB, assume TAB-separated
material
@@ -591,6 +592,8 @@ (defun org-table-convert-region (beg0 end0
optional separator)
(if ( separator 1)
(user-error Number of spaces in separator must be = 1)
(format ^ *\\| *\t *\\| \\{%d,\\} separator)))
+ ((stringp separator)
+ (format ^ *\\|%s separator))
(t (error This should not happen
(while (re-search-forward re end t)
(replace-match | t t)))
--
1.7.10.4
Re: [O] epresent issue
Rustom Mody rustompm...@gmail.com writes: On Fri, Sep 27, 2013 at 7:20 AM, Rustom Mody rustompm...@gmail.com wrote: Hi I am trying to use epresent for presentation. Start epresent with M-x epresent-run I seem to need to press one more q to get out of epresenting and then that q gets into the file. I can't reproduce this problem with a recent version of epresent and Org-mode. For example with the following minimal Emacs invocation (without any configuration, run from the epresent directory). emacs -Q --eval (progn (add-to-list 'load-path \~/src/org-mode/lisp\) (require 'org)) -l epresent.el present.org This is using epresent from https://github.com/eschulte/epresent. Best, Thanks Rusi Sorry for the half-complete line: Start epresent with M-x epresent-run Was meaning to write a scenario but then decided that the one line was enough :-) Did not include usual version stuff (I assumed that I am doing something wrong) so here it is Org-mode version 8.2 (release_8.2-34-g33aded Emacs 23.4.1 epresent downloaded yesterday Rusi -- Eric Schulte https://cs.unm.edu/~eschulte PGP: 0x614CA05D
Re: [O] Request for write access to Word (noorul)
On Fri, Sep 27, 2013 at 2:51 PM, Bastien b...@gnu.org wrote: Noorul Islam Kamal Malmiyoda noo...@noorul.com writes: I am not able to push changes now. Is this now disabled for me? I don't think so, but you need to push to the orgmode.org server, not to repo.or.cz -- please ask for further help on the mailing list. I have the remote set as G |master O| -- git remote -v origin w...@orgmode.org:worg.git (fetch) origin w...@orgmode.org:worg.git (push) G |master O| -- git pull Permission denied (publickey). fatal: The remote end hung up unexpectedly Do I have to resend public key to someone to add? I have that setup on repo.or.cz. Thanks and Regards Noorul
Re: [O] Lots of \n in ox-html output
On Fri, Sep 27, 2013 at 11:29:57AM +0200, Thorsten Jolitz wrote: Nicolas Goaziou n.goaz...@gmail.com writes: Hello, Thorsten Jolitz tjol...@gmail.com writes: although I did not update recently, html-export of this test org-file suddenly includes lots of \n in the html output. I cannot reproduce it. Does it also happen with a minimal configuration file? It must be something emacsclient/server related, since it does not happen when I call (pseudocode): ,--- | emacs -Q -l init.el -e org-export- ... `--- but does happen with ,-- | emacs -Q --daemon=myserver -l init.el | emacsclient -e org-export-... `-- where init.el does _nothing_ but setting load-path and requiring the necessary libs. Can you try emacs -Q -l init.el where you start the server with server-start in init.el? -- Suvayu Open source is the future. It sets us free.
Re: [O] Request for write access to Word (noorul)
Noorul Islam Kamal Malmiyoda noo...@noorul.com writes: Do I have to resend public key to someone to add? You do have this key on the server: ssh-rsa B3NzaC1yc2EA...uOJluuy7Fob1dI93uuU0WWQ== noorul@noorul If this is not the correct one, please send me the new one. Otherwise please try to clone from the server again (not just update the remote git locations) and pull/push. -- Bastien
Re: [O] Special characters in tables (iso-latin-1 or utf-8)
Dnia 2013-09-27, o godz. 11:21:58 Jarmo Hurri jarmo.hu...@syk.fi napisał(a): Greetings. A lot of my tables contain special characters (such as ä and ö) because those are used in Finnish names. These are now causing problems for me in table formulas. Can someone tell me how to fix the table below so that the formula will work? * testing table | string | same string | |+-| | abc| abc | | smörre | #ERROR | #+TBLFM: $2=$1 When I open a new org-file and type special characters in it, the default encoding seems to be iso-latin-1; changing this to utf-8 has not helped. My guess would be that the reason is that calc supports only ASCII strings. All the best, Jarmo Best, -- Marcin Borkowski http://octd.wmi.amu.edu.pl/en/Marcin_Borkowski Adam Mickiewicz University
Re: [O] [BUG] Colored tags generate an error when C-x C-w'ing the agenda
On 11.9.2013, at 14:48, Sebastien Vauban sva-n...@mygooglest.com wrote: Hello, If you have colors for tags: --8---cut here---start-8--- ;; faces for specific tags (setq org-tag-faces '((home . (:slant italic :foreground #5C88D3 :background #BBDDFF)) (work . (:slant italic :foreground #5F7C43 :background #C1D996 --8---cut here---end---8--- you can't export the agenda views anymore; they all generate the following error: Since Emacs does display correctly with this way to specify a font, I'd say this is a bug in ps-print and should be reported to Emacs as such. It does seem to work if you specify the faces like this (without the dot). (setq org-tag-faces '((home (:slant italic :foreground #5C88D3 :background #BBDDFF)) (work (:slant italic :foreground #5F7C43 :background #C1D996 - Carsten #+begin_src text Debugger entered--Lisp error: (wrong-type-argument listp #5C88D3) ps-face-attributes(#5C88D3) ps-face-attribute-list((:slant italic :foreground #5C88D3 :background #BBDDFF)) ps-plot-with-face(459 463 (:slant italic :foreground #5C88D3 :background #BBDDFF)) ps-generate-postscript-with-faces1(1 6850) ps-generate-postscript-with-faces(1 6850) ps-generate(#buffer Agenda View 1 6850 ps-generate-postscript-with-faces) ps-spool-with-faces(1 6850 nil) ps-print-with-faces(1 6850 ~/agenda.ps) ps-print-buffer-with-faces(~/agenda.ps) ... command-execute(org-agenda-write) #+end_src Best regards, Seb -- Sebastien Vauban signature.asc Description: Message signed with OpenPGP using GPGMail
[O] AUCTeX key bindings within Org documents
Hello, Due to a friend's request, I've tried to offer AUCTeX key bindings within Org documents via a minor mode, called org-auctex-keys. If you're interested, check it out at https://github.com/fniessen/org-auctex-key-bindings. Note that I'm willing to add extra AUCTeX keys -- but I don't use AUCTeX enough to know what's important to transfer to Org. Best regards, Fabrice -- Fabrice Niessen Leuven, Belgium
Re: [O] [BUG] Colored tags generate an error when C-x C-w'ing the agenda
Hi Carsten, Carsten Dominik wrote: On 11.9.2013, at 14:48, Sebastien Vauban sva-n...@mygooglest.com wrote: If you have colors for tags: --8---cut here---start-8--- ;; faces for specific tags (setq org-tag-faces '((home . (:slant italic :foreground #5C88D3 :background #BBDDFF)) (work . (:slant italic :foreground #5F7C43 :background #C1D996 --8---cut here---end---8--- you can't export the agenda views anymore; they all generate the following error: It does seem to work if you specify the faces like this (without the dot). (setq org-tag-faces '((home (:slant italic :foreground #5C88D3 :background #BBDDFF)) (work (:slant italic :foreground #5F7C43 :background #C1D996 Without the dot [1], I confirm that I can export both to HTML and PDF with no error. Though, in the PDF, these tags have a white background, not the one specified. This is a small annoyance... Since Emacs does display correctly with this way to specify a font, I'd say this is a bug in ps-print and should be reported to Emacs as such. ... which I'll report (with your analysis) to Emacs. Thanks for your help! Best regards, Seb [1] I'd never ever have thought to remove the dot. How did you discover or know that? -- Sebastien Vauban
Re: [O] org mode R remote code evaluation
Eric Schulte schulte.e...@gmail.com writes: I'd rather not hard-code the value of /tmp/. Perhaps you could rework the patch so that it introduces a new customizable variable (including a documentation string) so that users can set the value for their system. Also, please package the patch with git format-patch. Patch is appended. Thanks, Best regards, Michael. From 2b8db5486de75ec35c2c0d3e6063847cf582ace7 Mon Sep 17 00:00:00 2001 From: Michael Albinus michael.albi...@gmx.de Date: Fri, 27 Sep 2013 13:34:03 +0200 Subject: [PATCH] * ob-core.el (org-babel-local-file-name): Simplify. (org-babel-process-file-name): Apply `expand-file-name' first. (org-babel-remote-temporary-directory): New defcustom. (org-babel-temp-file): Use it. --- lisp/ob-core.el | 19 --- 1 file changed, 12 insertions(+), 7 deletions(-) diff --git a/lisp/ob-core.el b/lisp/ob-core.el index 5a032a1..a7c227b 100644 --- a/lisp/ob-core.el +++ b/lisp/ob-core.el @@ -2680,11 +2680,7 @@ Fixes a bug in `tramp-handle-call-process-region'. (defun org-babel-local-file-name (file) Return the local name component of FILE. - (if (file-remote-p file) - (let (localname) - (with-parsed-tramp-file-name file nil - localname)) -file)) + (or (file-remote-p file 'localname) file)) (defun org-babel-process-file-name (name optional no-quote-p) Prepare NAME to be used in an external process. @@ -2694,7 +2690,10 @@ remotely. The file name is then processed by `expand-file-name'. Unless second argument NO-QUOTE-P is non-nil, the file name is additionally processed by `shell-quote-argument' ((lambda (f) (if no-quote-p f (shell-quote-argument f))) - (expand-file-name (org-babel-local-file-name name + ;; We must apply `expand-file-name' on the whole filename. If we + ;; would apply it on the local filename only, undesired effects + ;; like prepending a drive letter on MS Windows could happen. + (org-babel-local-file-name (expand-file-name name (defvar org-babel-temporary-directory) (unless (or noninteractive (boundp 'org-babel-temporary-directory)) @@ -2707,6 +2706,11 @@ additionally processed by `shell-quote-argument' Used by `org-babel-temp-file'. This directory will be removed on Emacs shutdown.)) +(defcustom org-babel-remote-temporary-directory /tmp/ + Directory to hold temporary files on remote hosts. + :group 'org-babel + :type 'string) + (defmacro org-babel-result-cond (result-params scalar-form rest table-forms) Call the code to parse raw string results according to RESULT-PARAMS. (declare (indent 1) @@ -2736,7 +2740,8 @@ of `org-babel-temporary-directory'. (if (file-remote-p default-directory) (let ((prefix (concat (file-remote-p default-directory) - (expand-file-name prefix temporary-file-directory + (expand-file-name + prefix org-babel-remote-temporary-directory (make-temp-file prefix nil suffix)) (let ((temporary-file-directory (or (and (boundp 'org-babel-temporary-directory) -- 1.8.1.2
Re: [O] AUCTeX key bindings within Org documents
Hello Fabrice,
Fabrice Niessen fni-news-TA4HMoP+1wHrZ44/dzw...@public.gmane.org
writes:
Due to a friend's request, I've tried to offer AUCTeX key bindings within Org
documents via a minor mode, called org-auctex-keys.
I checked that out because I often find myself doing C-c C-e while in
org-mode, but I expected it would insert
#+BEGIN_SRC latex
\begin{prompted_env}
\end{prompted_env}
#+END_SRC
instead of a new item.
OTOH, I don't really want such a feature, because when I do this, I
usually realize that it's time for me to export the tree to LaTeX and go
on from there.
If you're interested, check it out at
https://github.com/fniessen/org-auctex-key-bindings.
I see no licence, which I think (though IANAL) is equal to a strict and
super restrictive copyright ; is that intended ?
Best wishes,
--
Nicolas.
[O] Bug: *bold* text isn't fontified unless text is changed on the same line [8.1 (release_8.1-3-ga005db)]
Hi, The font-lock works fine as I type, but when I re-open the file, or call `revert-buffer', the *bold* text loses its fontification. Note that all others, like /italic/ or =code=, work fine. Only *bold* is affected. I attach a test file. * Emphasis test ** bold test *bold* ** italic test /italic/ ** underlined test _underlined_ ** code test =code= ** verbatim test ~verbatim~ ** strike-through test +strike-through+ Tested with org-mode from git, as well as with emacs -q. regards, Oleh
[O] [BABEL] BUG - error on tangling - disappears when changing the filename
Hi I have a strange error when tangling. I have a large org file with several code blocks tangling in about 20 R files and one bash file. Usually tangling works perfectly, but sometimes one code block does not tangle a code block to a file. These are different blocks. When I change the name of the fiole to be tangled to, it works again. After d=some time, I can rename it again and it works again. The last time it happened, I was debugging the function. But even when deleting all the content of the code block, the problem persists. This persists over restarts of org. The code block looks as follow: , | *** dispProb2D (./R/dispProd2D.R) | :PROPERTIES: | :tangle: ./R/dispProd2D.R | :comments: yes | :no-expand: TRUE | :END: | #+begin_src R | cat(5) | #+end_src ` In the original version, there is obviously code in it, but the error occurs even in the empty block. I just renamed the block, and it is working again. Any idea what is causing this? Please find the backtrace below. Cheers, Rainer , | ebugger entered--Lisp error: (wrong-type-argument stringp nil) | set-buffer(nil) | (save-current-buffer (set-buffer (get-file-buffer file)) (revert-buffer t t t)) | org-babel-find-file-noselect-refresh(./R/dispProd2D.R) | (let* ((temp-path file) (visited-p (get-file-buffer temp-path)) temp-result temp-file) (org-babel-find-file-noselect-refresh temp-path) (setq temp-file (get-file-buffer temp-path)) (save-current-buffer (set-buffer temp-file) (setq temp-result (progn (run-hooks (quote org-babel-post-tangle-hook) (if visited-p nil (kill-buffer temp-file)) temp-result) | (lambda (file) (let* ((temp-path file) (visited-p (get-file-buffer temp-path)) temp-result temp-file) (org-babel-find-file-noselect-refresh temp-path) (setq temp-file (get-file-buffer temp-path)) (save-current-buffer (set-buffer temp-file) (setq temp-result (progn (run-hooks (quote org-babel-post-tangle-hook) (if visited-p nil (kill-buffer temp-file)) temp-result))(./R/dispProd2D.R) | mapc((lambda (file) (let* ((temp-path file) (visited-p (get-file-buffer temp-path)) temp-result temp-file) (org-babel-find-file-noselect-refresh temp-path) (setq temp-file (get-file-buffer temp-path)) (save-current-buffer (set-buffer temp-file) (setq temp-result (progn (run-hooks (quote org-babel-post-tangle-hook) (if visited-p nil (kill-buffer temp-file)) temp-result)) (postTangleScript.sh ./.gitignore ./DESCRIPTION ./.Rbuildignore ./R/parmsFire.R ./R/parmsPinus.R ./R/parmsAcacia.R ./R/parmsRubus.R ./R/parmsBudget.R ./R/parameter.R ./R/endYear.R ./R/germEst.R ./R/seedDispersal.R ./R/seedProduction.R ./R/fireAliens.R ./R/clearAliens.R ./R/prioritisation.R ./R/beginYear.R ./R/main.R ./R/cumulativeDc.R ./R/dcToIndLayer.R ./R/competition.R ./R/dispProd2D.R ./R/initfun.R ./R/newInDrak.R ./R/resetOptions.R ./R/stats.R ./R/layerIO.R ./R/layerNames.R ./R/onLoad.R ./NAMESPACE ./R/package.R)) | (progn (mapc (function (lambda (file) (let* ((temp-path file) (visited-p (get-file-buffer temp-path)) temp-result temp-file) (org-babel-find-file-noselect-refresh temp-path) (setq temp-file (get-file-buffer temp-path)) (save-current-buffer (set-buffer temp-file) (setq temp-result (progn ...))) (if visited-p nil (kill-buffer temp-file)) temp-result))) (mapcar (function car) path-collector))) | (if org-babel-post-tangle-hook (progn (mapc (function (lambda (file) (let* ((temp-path file) (visited-p ...) temp-result temp-file) (org-babel-find-file-noselect-refresh temp-path) (setq temp-file (get-file-buffer temp-path)) (save-current-buffer (set-buffer temp-file) (setq temp-result ...)) (if visited-p nil (kill-buffer temp-file)) temp-result))) (mapcar (function car) path-collector | (let ((block-counter 0) (org-babel-default-header-args (if target-file (org-babel-merge-params org-babel-default-header-args (list (cons :tangle target-file))) org-babel-default-header-args)) (tangle-file (if (equal arg (quote (16))) (progn (or (cdr (assoc :tangle ...)) (user-error Point is not in a source code block) path-collector) (mapc (function (lambda (by-lang) (let* ((lang (car by-lang)) (specs (cdr by-lang)) (ext (or ... lang)) (lang-f (intern ...)) she-banged) (mapc (function (lambda ... ...)) specs (if (equal arg (quote (4))) (org-babel-tangle-single-block 1 t) (org-babel-tangle-collect-blocks lang tangle-file))) (message Tangled %d code block%s from %s block-counter (if (= block-counter 1) s) (file-name-nondirectory (buffer-file-name (or (buffer-base-buffer) (current-buffer) (if org-babel-post-tangle-hook (progn (mapc (function (lambda (file) (let* (... ... temp-result temp-file) (org-babel-find-file-noselect-refresh temp-path) (setq temp-file ...) (save-current-buffer ... ...) (if visited-p nil ...) temp-result))) (mapcar (function car) path-collector (mapc (function (lambda (pair) (if (cdr pair) (progn (set-file-modes (car pair) (cdr pair)) path-collector) (mapcar (function
Re: [O] AUCTeX key bindings within Org documents
Dnia 2013-09-27, o godz. 13:21:40 Fabrice Niessen fni-n...@pirilampo.org napisał(a): Hello, Due to a friend's request, I've tried to offer AUCTeX key bindings within Org documents via a minor mode, called org-auctex-keys. If you're interested, check it out at https://github.com/fniessen/org-auctex-key-bindings. Note that I'm willing to add extra AUCTeX keys -- but I don't use AUCTeX enough to know what's important to transfer to Org. Interesting idea - for me, especially C-c C-f bindings might be useful. What might be missing: C-c C-f C-e emphasize, might just be equivalent to C-c C-f C-i C-c C-j new item, might be equivalent to C-RET or something C-c C-c in AUCTeX, this just runs a TeX job. Here it initiate export or something like that. Best regards, Fabrice Best, -- Marcin Borkowski http://octd.wmi.amu.edu.pl/en/Marcin_Borkowski Adam Mickiewicz University
Re: [O] Lots of \n in ox-html output
Suvayu Ali fatkasuvayu+li...@gmail.com writes: On Fri, Sep 27, 2013 at 11:29:57AM +0200, Thorsten Jolitz wrote: Nicolas Goaziou n.goaz...@gmail.com writes: Hello, Thorsten Jolitz tjol...@gmail.com writes: although I did not update recently, html-export of this test org-file suddenly includes lots of \n in the html output. I cannot reproduce it. Does it also happen with a minimal configuration file? It must be something emacsclient/server related, since it does not happen when I call (pseudocode): ,--- | emacs -Q -l init.el -e org-export- ... `--- but does happen with ,-- | emacs -Q --daemon=myserver -l init.el | emacsclient -e org-export-... `-- where init.el does _nothing_ but setting load-path and requiring the necessary libs. Can you try emacs -Q -l init.el where you start the server with server-start in init.el? I tried, but to no avail. Seems like emacsclient somehow fiddles with the linefeed encoding ... -- cheers, Thorsten
Re: [O] Exploring data that is in org-mode format
Alan Schmitt alan.schm...@polytechnique.org writes: Hello, This question is slightly off-topic, but it may be of interest to people who have a lot of data entered in org-mode. The short version: what tools are available to explore data, typically stored in org-mode tables? The long version: I've tried an interesting website (https://tictrac.com/) whose goal is to gain some insight about ourselves by exploring some data we collect (think quantified self). I'm not happy with this site for three reasons: - I need to send it the data; - it focuses on health / activity data whereas there is much more that interests me (I for instance have weekly records of natural gas use in my gas-heated house and daily record of temperature average outside which I would love to compare); - it won't let you input arbitrary data (I asked about importing a CSV of my daily coffee consumption, they answered they require an external service to integrate the data). So I collect all this data because it's something I enjoy doing, and I would really like to explore it, from the comfortable position of my own computer. All of this data is in org-mode tables (or can be easily converted to org-mode table). Hence my questions: are there tools you would recommend? I'm not afraid of programming (I suspect an answer will be 'R'), but I would like pointers to tutorials to do these kind of things. The kind of things I would like to do are: - extract weekly or monthly tallies or estimation from data collected at irregular intervals; - compare data sources against each other; - estimate future trends based on past data (how much will my gas bill be?); - display the result in some kind of dashboard. Not org-related and not even emacs-related (sorry Marcin!) but applicable to the question: Apart from R and Matlab, there is also ... Python: I'm currently reading a very nice book that uses Python, Numpy, Pandas and Matplotlib for data exploration. It is called Python for Data Analysis, by Wes McKinney (the original developer of Pandas). I'm about a third of the way through it and I can recommend it. You can find a link to the book at the Pandas site: http://pandas.pydata.org/ Just in case the question arises: no, I'm not a paid endorser - just a satisfied customer :-) -- Nick
Re: [O] Elpa color-theme with emacs24
Hi Rene, On Fri, Sep 27, 2013 at 02:08:43AM +, Rene wrote: Sebastien Vauban sva-news@... writes: For the sake of completion, I think that, starting with Emacs 24, it's better to use their new custom theme mechanism, which is more general than the `color-theme' package (and offers the same services regarding color themes). You're right. DefTheme is the way to go and should be advised on the worg page: http://orgmode.org/worg/org-color-themes.html At least one of the themes on that page has an updated version using def-theme: https://github.com/suvayu/.emacs.d/blob/master/themes/dark-emacs-theme.el I'm the maintainer. -- Suvayu Open source is the future. It sets us free.
Re: [O] example filter for code blocks?
Actually, it turns out the publisher did put up the pdf with embedded files, you just can't open them in a pdf in a browser. If you download the file and open in a good pdf reader, you can open the embedded files. It just made my day to figure that out! This link: http://pubs.acs.org/doi/suppl/10.1021/ie400582a/suppl_file/ie400582a_si_001.pdf is a supporting information file created from org-mode, with embedded excel sheets, and the org-file that was exported to the pdf! It contains all of the data used to make the figures in the paper, along with the python scripts we used to make the figures. It is probably our most complete supplemental file ever. And, this file is freely available (although the manuscript requires a subscription to the journal). We actually wrote the manuscript in org-mode too, and submitted the latex source that was exported from the org-file. Now, if we can just get publishers to let us embed the org-source of the manuscript in the supporting information file so at least the content is available for free... John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Thu, Sep 26, 2013 at 4:58 PM, Thomas S. Dye t...@tsdye.com wrote: Hi John, Terrific! There go my plans for the weekend ... :) Good luck with the heavy-handed journal processor. It seems worth pursuing to me. All the best, Tom John Kitchin jkitc...@andrew.cmu.edu writes: I think it is so interesting, we have actually tried a variation of it! I set up an org-file that exported a supplementary information file, using attachfile to embed data files and scripts in the pdf. Unfortunately, the journal processed the pdf file, and stripped those files out ;( We haven't tried to see if we can get our original supplemental pdf accepted. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Thu, Sep 26, 2013 at 3:43 PM, Thomas S. Dye t...@tsdye.com wrote: Hi John, John Kitchin jkitc...@andrew.cmu.edu writes: Hi everyone, Thanks for the tips in using export filters for code blocks. I thought I would share my current solution. The goal was to export all the code blocks in an org-file to files systematically named part1/script-%d.py where %d is a number. I didnot want to tangle exactly, because I wanted to avoid naming the code block tangle files. Then, I wanted to insert a pdf link that would open the file, after the syntax highlighted code. I wanted this because it is not convenient to copy and paste the syntax-highlighted code into an editor. I teach from the pdf that is generated, and it would be convenient to just open the code, edit and rerun to explore solutions. This seems like it might be an elegant way to distribute a piece of reproducible research. I suspect most readers would prefer to have a pdf entry point into a compendium over an Org-mode entry point. Instead of distributing the Org-mode file that is configured to make a pdf file, carry out calculations, draw figures, etc., one could distribute a ready-made pdf file with an appendix of Supplementary Material that has all the code for calculations, figures, etc. What do you think? All the best, Tom -- Thomas S. Dye http://www.tsdye.com I think it is so interesting, we have actually tried a variation of it! I set up an org-file that exported a supplementary information file, using attachfile to embed data files and scripts in the pdf. Unfortunately, the journal processed the pdf file, and stripped those files out ;( We haven't tried to see if we can get our original supplemental pdf accepted. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Thu, Sep 26, 2013 at 3:43 PM, Thomas S. Dye t...@tsdye.com wrote: Hi John, John Kitchin jkitc...@andrew.cmu.edu writes: Hi everyone, Thanks for the tips in using export filters for code blocks. I thought I would share my current solution. The goal was to export all the code blocks in an org-file to files systematically named part1/script-%d.py where %d is a number. I didnot want to tangle exactly, because I wanted to avoid naming the code block tangle files. Then, I wanted to insert a pdf link that would open the file, after the syntax highlighted code. I wanted this because it is not convenient to
Re: [O] How to trigger the clockcheck in an agenda view.
On 10.9.2013, at 17:07, Nicolas Girard girard.nico...@gmail.com wrote: 2013/8/5 Sebastien Vauban sva-n...@mygooglest.com: Except the above, I definitely don't understand why it wouldn't work for you. Can you reproduce the problem with a minimal Emacs config file (adding the require of `org' and `org-agenda' before)? I think I understand why Rainer has a problem. According to the docstring from `org-agenda-custom-commands', there are two acceptable syntaxes for defining a command: - the simple one : (key desc type match settings files) - and the complex or composite one : (key desc (cmd1 cmd2 ...) general-settings-for-whole-set files). Now, the following code defines two commands, who are functionally identical, but syntactically different. The first one uses the simple syntax, and the second one, the complex syntax. If you evaluate the code and trigger the agenda, you'll see that the first command *doesn't* work as expected, while the second works. (I just borrowed your scissors to delimit my code, hope you don't mind ;-) ) --8---cut here---start-8--- (setq org-agenda-custom-commands nil) (setq org-agenda-custom-commands (append org-agenda-custom-commands '( (G Good: Clock Review ((agenda ((org-agenda-show-log 'clockcheck) (org-agenda-clockreport-mode t) (B Bad: Clock Review agenda ((org-agenda-show-log 'clockcheck) (org-agenda-clockreport-mode t)) --8---cut here---end---8--- There are a couple of subtle issues here. First of all, do not bind org-agenda-clockreport-mode or org-agenda-show-log in this way, these are internal variables and meant for a mode that is toggled interactively. Use org-agenda-start-with-clockreport-mode and org-agenda-start-with-log-mode instead. These are the values chosen when a new agenda buffer is created, and at that time its value is copied into internal variables. Second, because this happens when the agenda buffer is created, these need to be in the global list of variables, not the local ones for the agenda list, when you use a list of commands. So the example below will work in both cases: (setq org-agenda-custom-commands (append org-agenda-custom-commands '( (H Good: Clock Review ((agenda )) ((org-agenda-start-with-log-mode 'clockcheck) (org-agenda-start-with-clockreport-mode t))) (C Bad: Clock Review agenda ((org-agenda-start-with-log-mode 'clockcheck) (org-agenda-start-with-clockreport-mode t)) Hope this helps. - Carsten signature.asc Description: Message signed with OpenPGP using GPGMail
Re: [O] [BUG] Colored tags generate an error when C-x C-w'ing the agenda
On Sep 27, 2013, at 1:35 PM, Sebastien Vauban sva-n...@mygooglest.com wrote: Hi Carsten, Carsten Dominik wrote: On 11.9.2013, at 14:48, Sebastien Vauban sva-n...@mygooglest.com wrote: If you have colors for tags: --8---cut here---start-8--- ;; faces for specific tags (setq org-tag-faces '((home . (:slant italic :foreground #5C88D3 :background #BBDDFF)) (work . (:slant italic :foreground #5F7C43 :background #C1D996 --8---cut here---end---8--- you can't export the agenda views anymore; they all generate the following error: It does seem to work if you specify the faces like this (without the dot). (setq org-tag-faces '((home (:slant italic :foreground #5C88D3 :background #BBDDFF)) (work (:slant italic :foreground #5F7C43 :background #C1D996 Without the dot [1], I confirm that I can export both to HTML and PDF with no error. Though, in the PDF, these tags have a white background, not the one specified. This is a small annoyance... Since Emacs does display correctly with this way to specify a font, I'd say this is a bug in ps-print and should be reported to Emacs as such. ... which I'll report (with your analysis) to Emacs. Thank you! - Carsten Thanks for your help! Best regards, Seb [1] I'd never ever have thought to remove the dot. How did you discover or know that? -- Sebastien Vauban signature.asc Description: Message signed with OpenPGP using GPGMail
Re: [O] [BABEL] BUG - error on tangling - disappears when changing the filename
Forgot: tried with 8.2 stable release and with version from git - both the same. Rainer M Krug rai...@krugs.de writes: Hi I have a strange error when tangling. I have a large org file with several code blocks tangling in about 20 R files and one bash file. Usually tangling works perfectly, but sometimes one code block does not tangle a code block to a file. These are different blocks. When I change the name of the fiole to be tangled to, it works again. After d=some time, I can rename it again and it works again. The last time it happened, I was debugging the function. But even when deleting all the content of the code block, the problem persists. This persists over restarts of org. The code block looks as follow: , | *** dispProb2D (./R/dispProd2D.R) | :PROPERTIES: | :tangle: ./R/dispProd2D.R | :comments: yes | :no-expand: TRUE | :END: | #+begin_src R | cat(5) | #+end_src ` In the original version, there is obviously code in it, but the error occurs even in the empty block. I just renamed the block, and it is working again. Any idea what is causing this? Please find the backtrace below. Cheers, Rainer , | ebugger entered--Lisp error: (wrong-type-argument stringp nil) | set-buffer(nil) | (save-current-buffer (set-buffer (get-file-buffer file)) (revert-buffer t t t)) | org-babel-find-file-noselect-refresh(./R/dispProd2D.R) | (let* ((temp-path file) (visited-p (get-file-buffer temp-path)) | temp-result temp-file) (org-babel-find-file-noselect-refresh | temp-path) (setq temp-file (get-file-buffer temp-path)) | (save-current-buffer (set-buffer temp-file) (setq temp-result (progn | (run-hooks (quote org-babel-post-tangle-hook) (if visited-p nil | (kill-buffer temp-file)) temp-result) | (lambda (file) (let* ((temp-path file) (visited-p (get-file-buffer | temp-path)) temp-result temp-file) | (org-babel-find-file-noselect-refresh temp-path) (setq temp-file | (get-file-buffer temp-path)) (save-current-buffer (set-buffer | temp-file) (setq temp-result (progn (run-hooks (quote | org-babel-post-tangle-hook) (if visited-p nil (kill-buffer | temp-file)) temp-result))(./R/dispProd2D.R) | mapc((lambda (file) (let* ((temp-path file) (visited-p | (get-file-buffer temp-path)) temp-result temp-file) | (org-babel-find-file-noselect-refresh temp-path) (setq temp-file | (get-file-buffer temp-path)) (save-current-buffer (set-buffer | temp-file) (setq temp-result (progn (run-hooks (quote | org-babel-post-tangle-hook) (if visited-p nil (kill-buffer | temp-file)) temp-result)) (postTangleScript.sh ./.gitignore | ./DESCRIPTION ./.Rbuildignore ./R/parmsFire.R | ./R/parmsPinus.R ./R/parmsAcacia.R ./R/parmsRubus.R | ./R/parmsBudget.R ./R/parameter.R ./R/endYear.R | ./R/germEst.R ./R/seedDispersal.R ./R/seedProduction.R | ./R/fireAliens.R ./R/clearAliens.R ./R/prioritisation.R | ./R/beginYear.R ./R/main.R ./R/cumulativeDc.R | ./R/dcToIndLayer.R ./R/competition.R ./R/dispProd2D.R | ./R/initfun.R ./R/newInDrak.R ./R/resetOptions.R ./R/stats.R | ./R/layerIO.R ./R/layerNames.R ./R/onLoad.R ./NAMESPACE | ./R/package.R)) | (progn (mapc (function (lambda (file) (let* ((temp-path file) | (visited-p (get-file-buffer temp-path)) temp-result temp-file) | (org-babel-find-file-noselect-refresh temp-path) (setq temp-file | (get-file-buffer temp-path)) (save-current-buffer (set-buffer | temp-file) (setq temp-result (progn ...))) (if visited-p nil | (kill-buffer temp-file)) temp-result))) (mapcar (function car) | path-collector))) | (if org-babel-post-tangle-hook (progn (mapc (function (lambda | (file) (let* ((temp-path file) (visited-p ...) temp-result | temp-file) (org-babel-find-file-noselect-refresh temp-path) (setq | temp-file (get-file-buffer temp-path)) (save-current-buffer | (set-buffer temp-file) (setq temp-result ...)) (if visited-p nil | (kill-buffer temp-file)) temp-result))) (mapcar (function car) | path-collector | (let ((block-counter 0) (org-babel-default-header-args (if | target-file (org-babel-merge-params org-babel-default-header-args | (list (cons :tangle target-file))) org-babel-default-header-args)) | (tangle-file (if (equal arg (quote (16))) (progn (or (cdr (assoc | :tangle ...)) (user-error Point is not in a source code block) | path-collector) (mapc (function (lambda (by-lang) (let* ((lang (car | by-lang)) (specs (cdr by-lang)) (ext (or ... lang)) (lang-f (intern | ...)) she-banged) (mapc (function (lambda ... ...)) specs (if | (equal arg (quote (4))) (org-babel-tangle-single-block 1 t) | (org-babel-tangle-collect-blocks lang tangle-file))) (message | Tangled %d code block%s from %s block-counter (if (= block-counter | 1) s) (file-name-nondirectory (buffer-file-name (or | (buffer-base-buffer) (current-buffer) (if | org-babel-post-tangle-hook (progn (mapc (function (lambda (file) | (let* (... ... temp-result temp-file) |
Re: [O] A tutorial on using ox-rss.el to publish an Emacs-made blog
Hi flammable (?), flammable project flammable.proj...@gmail.com writes: * EMACS You need to have an Emacs version greater than 24.2.1. The function 'url-encode-url' must be present to generate successfully the RSS feed. Since I'm using Xubuntu 13.4. I had to add the PAA of Damien CASSOU to my apt config. Then I installed Emacs 24.3.1. The command 'url-encode-url' was listed in. Thanks -- I updated the blog post to mention this constraint. * ORG Files You should take care about the PROPERTIES section you use in your org_files or section used to generate the RSS feeed. the CATEGORY might be usefull to manage multiple feeds. Personnaly I don't try it but with Liferea RSS reader this option is visible. (I don't use the CATEGORY property myself but maybe will.) Personnaly, I put the same date for the DATE and PUBDATE options. The date are correctly displayed in my RSS reader. Why do you need the :DATE: ? :PUBDATE: is automatically added if not already present, and should be enough for the feed to know about the publication date. Thanks for testing! -- Bastien
Re: [O] A tutorial on using ox-rss.el to publish an Emacs-made blog
On Fri, Sep 27, 2013 at 03:38:01PM +0200, Bastien wrote: Hi flammable (?), The post was signed Basile. :-p -- Suvayu Open source is the future. It sets us free.
Re: [O] [BABEL] BUG - error on tangling - disappears when changing the filename
OK - narrowed it down to a post tangle hook which I need for proper debugging of R (jumping to source line in org file and not tangled R file): , | #+begin_src emacs-lisp | (defvar org-babel-tangled-file nil | If non-nill, current file was tangled with org-babel-tangle) | (put 'org-babel-tangled-file 'safe-local-variable 'booleanp) | | (defun org-babel-mark-file-as-tangled () | (when (string-match [.]R (buffer-file-name)) | (add-file-local-variable 'org-babel-tangled-file t) | (add-file-local-variable 'buffer-read-only t) | (add-file-local-variable 'eval: '(auto-revert-mode)) | (basic-save-buffer))) | | (add-hook 'org-babel-post-tangle-hook 'org-babel-mark-file-as-tangled) | #+end_src ` The question is now why is this function org-babel-mark-file-as-tangled receives NULL as a buffer-file-name? I can't remove the when as I am also tangling some files which do not have any comment characters (DESCRIPTION file in R packages). Any suggestions welcome, Rainer Rainer M Krug rai...@krugs.de writes: Forgot: tried with 8.2 stable release and with version from git - both the same. Rainer M Krug rai...@krugs.de writes: Hi I have a strange error when tangling. I have a large org file with several code blocks tangling in about 20 R files and one bash file. Usually tangling works perfectly, but sometimes one code block does not tangle a code block to a file. These are different blocks. When I change the name of the fiole to be tangled to, it works again. After d=some time, I can rename it again and it works again. The last time it happened, I was debugging the function. But even when deleting all the content of the code block, the problem persists. This persists over restarts of org. The code block looks as follow: , | *** dispProb2D (./R/dispProd2D.R) | :PROPERTIES: | :tangle: ./R/dispProd2D.R | :comments: yes | :no-expand: TRUE | :END: | #+begin_src R | cat(5) | #+end_src ` In the original version, there is obviously code in it, but the error occurs even in the empty block. I just renamed the block, and it is working again. Any idea what is causing this? Please find the backtrace below. Cheers, Rainer , | ebugger entered--Lisp error: (wrong-type-argument stringp nil) | set-buffer(nil) | (save-current-buffer (set-buffer (get-file-buffer file)) (revert-buffer t t t)) | org-babel-find-file-noselect-refresh(./R/dispProd2D.R) | (let* ((temp-path file) (visited-p (get-file-buffer temp-path)) | temp-result temp-file) (org-babel-find-file-noselect-refresh | temp-path) (setq temp-file (get-file-buffer temp-path)) | (save-current-buffer (set-buffer temp-file) (setq temp-result (progn | (run-hooks (quote org-babel-post-tangle-hook) (if visited-p nil | (kill-buffer temp-file)) temp-result) | (lambda (file) (let* ((temp-path file) (visited-p (get-file-buffer | temp-path)) temp-result temp-file) | (org-babel-find-file-noselect-refresh temp-path) (setq temp-file | (get-file-buffer temp-path)) (save-current-buffer (set-buffer | temp-file) (setq temp-result (progn (run-hooks (quote | org-babel-post-tangle-hook) (if visited-p nil (kill-buffer | temp-file)) temp-result))(./R/dispProd2D.R) | mapc((lambda (file) (let* ((temp-path file) (visited-p | (get-file-buffer temp-path)) temp-result temp-file) | (org-babel-find-file-noselect-refresh temp-path) (setq temp-file | (get-file-buffer temp-path)) (save-current-buffer (set-buffer | temp-file) (setq temp-result (progn (run-hooks (quote | org-babel-post-tangle-hook) (if visited-p nil (kill-buffer | temp-file)) temp-result)) (postTangleScript.sh ./.gitignore | ./DESCRIPTION ./.Rbuildignore ./R/parmsFire.R | ./R/parmsPinus.R ./R/parmsAcacia.R ./R/parmsRubus.R | ./R/parmsBudget.R ./R/parameter.R ./R/endYear.R | ./R/germEst.R ./R/seedDispersal.R ./R/seedProduction.R | ./R/fireAliens.R ./R/clearAliens.R ./R/prioritisation.R | ./R/beginYear.R ./R/main.R ./R/cumulativeDc.R | ./R/dcToIndLayer.R ./R/competition.R ./R/dispProd2D.R | ./R/initfun.R ./R/newInDrak.R ./R/resetOptions.R ./R/stats.R | ./R/layerIO.R ./R/layerNames.R ./R/onLoad.R ./NAMESPACE | ./R/package.R)) | (progn (mapc (function (lambda (file) (let* ((temp-path file) | (visited-p (get-file-buffer temp-path)) temp-result temp-file) | (org-babel-find-file-noselect-refresh temp-path) (setq temp-file | (get-file-buffer temp-path)) (save-current-buffer (set-buffer | temp-file) (setq temp-result (progn ...))) (if visited-p nil | (kill-buffer temp-file)) temp-result))) (mapcar (function car) | path-collector))) | (if org-babel-post-tangle-hook (progn (mapc (function (lambda | (file) (let* ((temp-path file) (visited-p ...) temp-result | temp-file) (org-babel-find-file-noselect-refresh temp-path) (setq | temp-file (get-file-buffer temp-path)) (save-current-buffer | (set-buffer temp-file) (setq temp-result ...)) (if visited-p nil | (kill-buffer temp-file))
Re: [O] A tutorial on using ox-rss.el to publish an Emacs-made blog
Suvayu Ali fatkasuvayu+li...@gmail.com writes: On Fri, Sep 27, 2013 at 03:38:01PM +0200, Bastien wrote: Hi flammable (?), The post was signed Basile. :-p Yep, sorry Basile ! -- Bastien
Re: [O] Amazing demonstration by John Kitchin
John, I finally got a chance to watch your really nice SciPy talk last night. I've been trying to incorporate Reproducible Research methods with org into my own work. I strive to do more and what you are doing looks to provide a wealth of examples. I hope more researchers follow this methodology. One thing I've yet to get a good handle on is publishing org content in an automated (and beautiful) way. I was very taken with your github.io pages and would like to try to set up something similar for myself. Do you have a write-up or other guidance on this that I might follow? I've started to go through your related github repositories to figure out what you do but if something more guided exists it would help. Thanks, -Brett. Carsten Dominik carsten.domi...@gmail.com writes: Hi, I don't know if this has been linked to before on this mailing list. At SciPy 2013, John Kitchin has made an amazing demonstration of Org-mode as a tool for reproducible research. Really amazing to watch. http://www.youtube.com/watch?v=1-dUkyn_fZA - Carsten pgp7cZIYAKeld.pgp Description: PGP signature
Re: [O] Convention for tags and properties
Nicolas Goaziou wrote: Sebastien Vauban writes: Following those conventions, I guess that: - The `crypt' tag should be renamed `CRYPT' - The `Effort' property should be renamed `EFFORT' Right? FWIW, I think you're correct. Would such a patch be accepted, then, if I can make it? Best regards, Seb -- Sebastien Vauban
[O] Round-tripping data between org-mode table and sqlite db using python
Hi,
I've written an org file in which I use org tables and ob-python blocks
to manipulate an sqlite database. Updates to the database are a mix of
manual data entry and computed values. I'm using org-8.0.3 at the
moment.
I was going to post asking how to do this but I managed to develop a
working solution this morning, see the attached org file and the ascii
export below. I'm sure it could be improved, so I'm interested in advice
on how to go about that.
My main issue is that I wish to export the ob-python code as well as the
org-table showing the data, but present them under separate topics. So,
I would like the freedom to place the org-table anywhere within the org
file, preferably as a named table in a topic without an org-babel block
above it. Also, in my application the tables have about 100 rows and
having org-babel blocks hanging around add visual clutter when I'm
performing the edits.
I've not posted to this list much (at all?) so if there is a better way
to present the org example, let me know.
Cheers,
Colin.
Round trip table of data through an ob-python block
===
I'd like to edit values in tables, store them to an Sqlite database,
update the table from the Sqlite database, make changes, and store
them back to the database.
Here is an example table (I don't know any Hungarian):
Hungarian English
alpha matches
beta station
gamma tobacco
Data entry and Retrieval from Sqlite database
=
Before making any edits run retrieveFromSqliteDb to update the data
entry table.
,
| #!/usr/bin/env python
| import sqlite3
| con = sqlite3.connect('/var/tmp/test.db')
| cur = con.cursor()
| cur.execute(SELECT * FROM translations)
| rows = cur.fetchall()
| print '|-+-|'
| print '| Hungarian | English |'
| print '|-+-|'
| for row in rows:
| id, hungarian, english = row
| print '| {hungarian} | {english}
|'.format(hungarian=hungarian,english=english)
|
| print '|-+-|'
| con.close()
`
Listing 1: Retrieve records from database on disk, update data entry
table
Hungarian English
onetwo
three four
Table 1: Data entry table for Hungarian-English translation
I placed a calls here to make it a bit handier for running the write
to database block.
Writing data to the Sqlite database
===
Run this ob-python block to update the Sqlite database
,
| #!/usr/bin/env python
| import sqlite3
| con = sqlite3.connect('/var/tmp/test.db')
| c = con.cursor()
| c.execute(DROP TABLE IF EXISTS translations)
| c.execute('''CREATE TABLE translations (
| id INTEGER PRIMARY KEY AUTOINCREMENT,
| hungarian TEXT,
| english TEXT);
| ''')
| c.executemany('INSERT INTO translations (hungarian,english) VALUES (?,?)',
inData)
| con.commit()
| con.close()
`
Listing 2: Write records from table to database on disk
Utilities for working with the database
===
,
| #!/usr/bin/env python
| import sqlite3
| con = sqlite3.connect('/var/tmp/test.db')
| c = con.cursor()
| c.execute(DROP TABLE IF EXISTS translations)
| c.execute('''CREATE TABLE translations (
| id INTEGER PRIMARY KEY AUTOINCREMENT,
| hungarian TEXT,
| english TEXT);
| ''')
| con.commit()
| con.close()
`
Listing 3: Creating an empty database
,
| .mode column
| .headers on
| select * from translations;
`
Listing 4: Dump records from the database on disk
#+TITLE: Round trip table of data through an ob-python block
#+AUTHOR:Colin Hall
#+EMAIL: colingh...@gmail.com
#+DATE: 2013-09-27 Fri
#+DESCRIPTION: An example of round tripping data from org through an Sqlite database
#+LANGUAGE: en
#+OPTIONS: H:1 num:nil toc:nil \n:nil @:t ::t |:t ^:{} -:t f:nil *:t :nil
#+OPTIONS: TeX:t LaTeX:t skip:nil d:nil todo:nil pri:nil tags:nil
#+STARTUP: overview
#+STARTUP: hidestars
* Round trip table of data through an ob-python block
I'd like to edit values in tables, store them to an Sqlite database,
update the table from the Sqlite database, make changes, and store
them back to the database.
Here is an example table (I don't know any Hungarian):
#+attr_html: :border 2 :rules all :frame border
|---+-|
| Hungarian | English |
|---+-|
| alpha | matches |
| beta | station |
| gamma | tobacco |
|---+-|
* Data entry and Retrieval from Sqlite database
Before making any edits
Re: [O] [Babel] Padlines
Hi Eric, Eric Schulte wrote: Sebastien Vauban sva-n...@mygooglest.com writes: Eric Schulte wrote: aditya siram aditya.si...@gmail.com writes: What's the rationale for having padlines by default in tangled source? It generates wrong programs for languages where whitespace is significant (Haskell) and, for me, doesn't noticeably improve the look of the tangled file in cases where it isn't. It is possible to change the value of default header arguments on a per-language basis because e.g., while (:padlines yes) may make sense for sh, it probably doesn't for Haskell. Could it be possible that :padline yes does not insert a blank line in front of the very first block, only *between* all blocks? I just pushed up a commit which implements this behavior. See the attached file for an example. #+Title: Examples with the new padline behavior The blank line which was inserted between blocks isn't anymore for me. ECM: --8---cut here---start-8--- * Tangle these blocks :PROPERTIES: :tangle: yes :padline: yes :END: #+begin_src emacs-lisp :file test.csv data #+end_src #+begin_src emacs-lisp :file test.csv datb #+end_src --8---cut here---end---8--- results in: --8---cut here---start-8--- data datb --8---cut here---end---8--- Note that I tried adding :padline to yes, but I normally should not, as it is the default. Best regards, Seb -- Sebastien Vauban
Re: [O] Amazing demonstration by John Kitchin
Here is part of how I use org-mode to publish to my blog: http://jkitchin.github.io/blog/2013/09/27/Publishing-to-blogofile-using-org-mode/ My approach is pretty automated, but I have left some manual steps in place. Basically I write a post as a heading in some org-file, press a key, which generates the html post in the required format and in the right place. Then I build the blog, and push it to github. All that could happen with a key press, but sometimes I like to inspect the content before pushing. I will try to describe the actual blog setup another time. I use blogofile, which is a static blog generator, so it is quite different from using wordpress, or other blog systems that you publish to via rss, xml-rpc, etc... John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Fri, Sep 27, 2013 at 9:55 AM, Brett Viren b...@bnl.gov wrote: John, I finally got a chance to watch your really nice SciPy talk last night. I've been trying to incorporate Reproducible Research methods with org into my own work. I strive to do more and what you are doing looks to provide a wealth of examples. I hope more researchers follow this methodology. One thing I've yet to get a good handle on is publishing org content in an automated (and beautiful) way. I was very taken with your github.io pages and would like to try to set up something similar for myself. Do you have a write-up or other guidance on this that I might follow? I've started to go through your related github repositories to figure out what you do but if something more guided exists it would help. Thanks, -Brett. Carsten Dominik carsten.domi...@gmail.com writes: Hi, I don't know if this has been linked to before on this mailing list. At SciPy 2013, John Kitchin has made an amazing demonstration of Org-mode as a tool for reproducible research. Really amazing to watch. http://www.youtube.com/watch?v=1-dUkyn_fZA - Carsten
Re: [O] example filter for code blocks?
Hi John, jkitc...@andrew.cmu.edu writes: Actually, it turns out the publisher did put up the pdf with embedded files, you just can't open them in a pdf in a browser. If you download the file and open in a good pdf reader, you can open the embedded files. It just made my day to figure that out! This link: http://pubs.acs.org/doi/suppl/10.1021/ie400582a/suppl_file/ie400582a_si_001.pdf I tried opening it with both Skim, Preview, and PdfPen and I don't see the pushpin I'm supposed to double-click. I see the pushpins when opening the file with emacs, but I cannot click them. Should I use a specific PDF viewer? Thanks, Alan
Re: [O] example filter for code blocks?
It works in Adobe Reader, Adobe, and Bluebeam Revu. I haven't tried any others. John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Fri, Sep 27, 2013 at 11:24 AM, Alan Schmitt alan.schm...@polytechnique.org wrote: Hi John, jkitc...@andrew.cmu.edu writes: Actually, it turns out the publisher did put up the pdf with embedded files, you just can't open them in a pdf in a browser. If you download the file and open in a good pdf reader, you can open the embedded files. It just made my day to figure that out! This link: http://pubs.acs.org/doi/suppl/10.1021/ie400582a/suppl_file/ie400582a_si_001.pdf I tried opening it with both Skim, Preview, and PdfPen and I don't see the pushpin I'm supposed to double-click. I see the pushpins when opening the file with emacs, but I cannot click them. Should I use a specific PDF viewer? Thanks, Alan
Re: [O] Amazing demonstration by John Kitchin
John Kitchin jkitc...@andrew.cmu.edu writes: Here is part of how I use org-mode to publish to my blog: http://jkitchin.github.io/blog/2013/09/27/Publishing-to-blogofile-using-org-mode/ Thank you very much for typing this up! I now have some weekend entertainment to try and replicate it for myself. -Brett. pgpEelfEMRLq4.pgp Description: PGP signature
[O] Needing help on org-gnus + LaTeX export -
Hi, I would be very happy to use LaTeX in gnus in scientific correspondence, instead of using LaTeX it with Thunderbird. I know that it is possible with org-mode , but I have difficulties to find a clear tutorial to help me in this task. My question is twofold: how concretely making links between my gnus and my org-mode installation, and once is done, how can I use it to write an email with every feature that gives me LaTeX (with texlive)? I would be very thankful to everyone trying to help me. In advance, thanks. Jo.
Re: [O] epresent issue
On Fri, Sep 27, 2013 at 3:13 PM, Eric Schulte schulte.e...@gmail.comwrote: Rustom Mody rustompm...@gmail.com writes: On Fri, Sep 27, 2013 at 7:20 AM, Rustom Mody rustompm...@gmail.com wrote: Hi I am trying to use epresent for presentation. Start epresent with M-x epresent-run I seem to need to press one more q to get out of epresenting and then that q gets into the file. I can't reproduce this problem with a recent version of epresent and Org-mode. For example with the following minimal Emacs invocation (without any configuration, run from the epresent directory). emacs -Q --eval (progn (add-to-list 'load-path \~/src/org-mode/lisp\) (require 'org)) -l epresent.el present.org I tried this (with my-path adjustments); and a just-downloaded epresent from above link; still the same behavior In more detail: 0. Run command emacs -Q --eval (progn (add-to-list 'load-path \~/pdsw/org-mode/lisp\) (require 'org)) -l ~/.emacs.d/downloads/epresent.el lastLect.org and then in emacs: 1. Start with epresent-run The buffer changes form half-way -- ie a. it becomes full-screen, b the menu line vanishes but c. the mode line is present d. the fonts are still small 2. After than whatever key I press (including q) it becomes like a presentation -- ie no mode-line and large fonts 3. One more q and it quits with the q appearing where point was last
Re: [O] Amazing demonstration by John Kitchin
no problem! I also typed up my notes on setting up blogofile here: http://jkitchin.github.io/blog/2013/09/27/Installing-and-configuring-blogofile/ I think they are pretty complete, but some of it was from memory. best wishes, John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu On Fri, Sep 27, 2013 at 11:41 AM, Brett Viren b...@bnl.gov wrote: John Kitchin jkitc...@andrew.cmu.edu writes: Here is part of how I use org-mode to publish to my blog: http://jkitchin.github.io/blog/2013/09/27/Publishing-to-blogofile-using-org-mode/ Thank you very much for typing this up! I now have some weekend entertainment to try and replicate it for myself. -Brett.
[O] Fwd: epresent issue
On Fri, Sep 27, 2013 at 9:58 PM, Rustom Mody rustompm...@gmail.com wrote: On Fri, Sep 27, 2013 at 3:13 PM, Eric Schulte schulte.e...@gmail.comwrote: Rustom Mody rustompm...@gmail.com writes: On Fri, Sep 27, 2013 at 7:20 AM, Rustom Mody rustompm...@gmail.com wrote: Hi I am trying to use epresent for presentation. Start epresent with M-x epresent-run I seem to need to press one more q to get out of epresenting and then that q gets into the file. I can't reproduce this problem with a recent version of epresent and Org-mode. For example with the following minimal Emacs invocation (without any configuration, run from the epresent directory). emacs -Q --eval (progn (add-to-list 'load-path \~/src/org-mode/lisp\) (require 'org)) -l epresent.el present.org I tried this (with my-path adjustments); and a just-downloaded epresent from above link; still the same behavior In more detail: 0. Run command emacs -Q --eval (progn (add-to-list 'load-path \~/pdsw/org-mode/lisp\) (require 'org)) -l ~/.emacs.d/downloads/epresent.el lastLect.org and then in emacs: 1. Start with epresent-run The buffer changes form half-way -- ie a. it becomes full-screen, b the menu line vanishes but c. the mode line is present d. the fonts are still small 2. After than whatever key I press (including q) it becomes like a presentation -- ie no mode-line and large fonts 3. One more q and it quits with the q appearing where point was last Also just checked with this trivial 4-line file in case there was something in my org file. Still the same -- * H1 ** H11 ** H12 * H2 --- I just wonder if its to do with 1. emacs version 23.4.1 2. I am using xfce not the more common gnome/kde etc Thinking of the second because there is a kind of lag in the full-screening of the window -- something which seems related to the window manager?? -- http://www.the-magus.in http://blog.languager.org
Re: [O] Exploring data that is in org-mode format
On Fri, Sep 27, 2013 at 3:18 AM, Alan Schmitt alan.schm...@polytechnique.org wrote: Hello, This question is slightly off-topic, but it may be of interest to people who have a lot of data entered in org-mode. The short version: what tools are available to explore data, typically stored in org-mode tables? [snip] So I collect all this data because it's something I enjoy doing, and I would really like to explore it, from the comfortable position of my own computer. All of this data is in org-mode tables (or can be easily converted to org-mode table). Hence my questions: are there tools you would recommend? I'm not afraid of programming (I suspect an answer will be 'R'), but I would like pointers to tutorials to do these kind of things. The kind of things I would like to do are: - extract weekly or monthly tallies or estimation from data collected at irregular intervals; - compare data sources against each other; - estimate future trends based on past data (how much will my gas bill be?); - display the result in some kind of dashboard. For simple exploration, you might have a look at ggobi? [1] It allows you to do some really quick/easy exploration by plotting and being able to check which variables to use for X and Y, coloring, filtering, changing plot type, and so on. There's an R package which allows you to call ggobi on an R data object, which you could easily create with babel and your existing org tables with the #+name option for the table and :var specification in the babel block header. I'd also highly recommend taking a look at shiny via R-Studio.[2] Not sure if you can call it from Org-mode, but even if you can't... not *everything* has to be done with Org. You could use the file to do some data munging/summarization/etc., save it as a new data set (.csv or similar), and then read that into Shiny. It could be *awesome* for something like this. I only recently started playing with it but it's just fantastic and would make for the ability to subset, change scales/time ranges, and much more in an interactive web app. I applied for a public server account with RStudio and got it so that as I learn and do more, I can make them public. As a result of an SO question, I repaid the answerer by creating an app from his reply: - Post: http://stackoverflow.com/questions/17958730/faceting-a-set-of-contour-plots-in-ggplot-r - Shiny app: http://spark.rstudio.com/jwhendy/interactive-contour/ Good luck! John [1] http://www.ggobi.org/ [2] http://www.rstudio.com/shiny/ Thanks a lot, Alan
Re: [O] example filter for code blocks?
That is a pretty interesting pdf. I cannot think of a way to do this simply. I think that filters get an info argument, which contains the parse tree. Maybe you could use that to build up a table of which blocks refer to each other somehow. I guess you would need some syntax in the src-block to indicate which blocks were referred to. then, use filters to modify the output of the rendered src-block by inserting the links in. From: Sebastien Vauban sva-n...@mygooglest.com To: emacs-orgmode@gnu.org Cc: Date: Fri, 27 Sep 2013 09:42:39 +0200 Subject: Re: [O] example filter for code blocks? Hello, John Kitchin wrote: Thanks for the tips in using export filters for code blocks. I thought I would share my current solution. The goal was to export all the code blocks in an org-file to files systematically named part1/script-%d.py where %d is a number. I didnot want to tangle exactly, because I wanted to avoid naming the code block tangle files. Then, I wanted to insert a pdf link that would open the file, after the syntax highlighted code. Thanks for sharing your wonderful solution! Related to such things, something I'd like to have for long (but never found time investigating it more) is that the PDF produced by Org would resemble more the PDF produced by Noweb. In the attached example file (sent on this ML in... 2009), you see that the Noweb extension to LaTeX - generated a code block number: page number + order (if there are multiple code blocks on the same page); - for each code block, attached a reference to all code blocks using it. In the example, you see that code block sql-init.sql (defined on page 2) gets the number 2a (in that export [1]), and is used in code blocks 2c and 3. And all those references are hyperlinks. I found that very handy for reading your LP (or RR) document. Best regards, Seb [1] It could change if text or code is added in the documentation. -- Sebastien Vauban John --- John Kitchin Associate Professor Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 http://kitchingroup.cheme.cmu.edu
[O] Exporting C++ code block to html
Dear Orgers, I face a problem when I want to 'html' export a pretty simple org file : test.org contains the following lines #+BEGIN_SRC c++ int j= 1; #+END_SRC If I do emacs --batch -q --eval '(require (quote org))' --visit test.org \ --funcall org-html-export-to-html I get Loading vc-git... Loading cc-langs... Symbol's function definition is void: nil I have also activated the debug mode but the messages are quite cryptic for me (attached file). The point is that it only crashes with C/C++ languages but works with python, awk, sh, emacs-lisp ... I'm using orgmode 8.2-35 from the git repository. Thanks for your help, Xavier oading vc-git... Loading cc-langs... Debugger entered--Lisp error: (void-function nil) nil(1 12 nil) c-font-lock-fontify-region(1 12 nil) font-lock-fontify-region(1 12 nil) byte-code(\212\303 \304\216\305ed #\210\306 \210\307\211+\207 [save-match-data-internal verbose font-lock-fontified match-data ((byte-code \30\302\\207 [save-match-data-internal set-match-data evaporate] 3)) font-lock-fontify-region font-lock-after-fontify-buffer t] 4) font-lock-default-fontify-buffer() font-lock-fontify-buffer() org-html-fontify-code(int j = 1;\n c++) org-html-do-format-code(int j = 1;\n c++ nil t nil) org-html-format-code((src-block (:language c++ :switches nil :parameters nil :begin 1 :end 39 :number-lines nil :preserve-indent nil :retain-labels t :use-labels t :label-fmt nil :hiddenp nil :value int j = 1;\n :post-blank 0 :post-affiliated 1 :parent (section (:begin 1 :end 39 :contents-begin 1 :contents-end 39 :post-blank 0 :parent (org-data nil #2)) #0))) (:export-options nil :input-file /home/garrido/Teachdir/C++.test/test.org :title test :html-extension html :html-link-org-as-html t :html-doctype xhtml-strict :html-container div :html-html5-fancy nil :html-link-use-abs-url nil :html-link-home :html-link-up :html-mathjax :html-postamble auto :html-preamble t :html-head :html-head-extra :html-head-include-default-style t :html-head-include-scripts t :html-table-attributes (:border 2 :cellspacing 0 :cellpadding 6 :rules groups :frame hsides) :html-table-row-tags (tr . /tr) :html-xml-declaration ((html . ?xml version=\1.0\ encoding=\%s\?) (php . ?php echo \?xml version=\\\1.0\\\ encoding=\\\%s\\\ ?\; ?)) :html-inline-images t :creator a href=\http://www.gnu.org/software/emacs/\;Emacs/a 24.3.1 (a href=\http://orgmode.org\;Org/a mode 8.2) :with-latex t :author nil ...)) org-html-src-block((src-block (:language c++ :switches nil :parameters nil :begin 1 :end 39 :number-lines nil :preserve-indent nil :retain-labels t :use-labels t :label-fmt nil :hiddenp nil :value int j = 1;\n :post-blank 0 :post-affiliated 1 :parent (section (:begin 1 :end 39 :contents-begin 1 :contents-end 39 :post-blank 0 :parent (org-data nil #2)) #0))) nil (:export-options nil :input-file /home/garrido/Teachdir/C++.test/test.org :title test :html-extension html :html-link-org-as-html t :html-doctype xhtml-strict :html-container div :html-html5-fancy nil :html-link-use-abs-url nil :html-link-home :html-link-up :html-mathjax :html-postamble auto :html-preamble t :html-head :html-head-extra :html-head-include-default-style t :html-head-include-scripts t :html-table-attributes (:border 2 :cellspacing 0 :cellpadding 6 :rules groups :frame hsides) :html-table-row-tags (tr . /tr) :html-xml-declaration ((html . ?xml version=\1.0\ encoding=\%s\?) (php . ?php echo \?xml version=\\\1.0\\\ encoding=\\\%s\\\ ?\; ?)) :html-inline-images t :creator a href=\http://www.gnu.org/software/emacs/\;Emacs/a 24.3.1 (a href=\http://orgmode.org\;Org/a mode 8.2) :with-latex t :author nil ...)) org-export-data((src-block (:language c++ :switches nil :parameters nil :begin 1 :end 39 :number-lines nil :preserve-indent nil :retain-labels t :use-labels t :label-fmt nil :hiddenp nil :value int j = 1;\n :post-blank 0 :post-affiliated 1 :parent (section (:begin 1 :end 39 :contents-begin 1 :contents-end 39 :post-blank 0 :parent (org-data nil #2)) #0))) (:export-options nil :input-file /home/garrido/Teachdir/C++.test/test.org :title test :html-extension html :html-link-org-as-html t :html-doctype xhtml-strict :html-container div :html-html5-fancy nil :html-link-use-abs-url nil :html-link-home :html-link-up :html-mathjax :html-postamble auto :html-preamble t :html-head :html-head-extra :html-head-include-default-style t :html-head-include-scripts t :html-table-attributes (:border 2 :cellspacing 0 :cellpadding 6 :rules groups :frame hsides) :html-table-row-tags (tr . /tr) :html-xml-declaration ((html . ?xml version=\1.0\ encoding=\%s\?) (php . ?php echo \?xml version=\\\1.0\\\ encoding=\\\%s\\\ ?\; ?)) :html-inline-images t :creator a href=\http://www.gnu.org/software/emacs/\;Emacs/a 24.3.1 (a href=\http://orgmode.org\;Org/a mode 8.2) :with-latex t :author nil ...)) #[(element) \302 \\207 [element info org-export-data] 3]((src-block (:language c++ :switches nil :parameters nil :begin 1 :end 39 :number-lines
[O] `orgstruct++-mode',`fill-paragraph', and `mail-mode'
I like the intuitive way the Org mode structure editing and list formatting works. Thus I turn it on in mail-mode with (add-hook 'mail-mode-hook 'turn-on-orgstruct) This works alright. But when I use `orgstruct++-mode' (add-hook 'mail-mode-hook 'turn-on-orgstruct++) Then `fill-paragraph' (M-q) doesn't behave correctly anymore when applied to the paragraph right below the `mail-header-separator' (--text follows this line--). All the above lines get rearranged. I just realized that with `orgstruct-mode' the regexp `paragraph-separate' contains the `mail-header-separator', whereas with `orgstruct++-mode' this regexp does NOT contain the `mail-header-separator'. The value of `paragraph-separate' is predefined in `sendmail.el'. `orgstruct-mode' appends new regexps to `paragraph-separate', whereas `orgstruct++-mode' replaces the initial value (given within `sendmail.el') by orgmode specific ones. -- Rene
[O] org-debbugs.el
Hi, I have produced a very first shot of org-debbugs.el. It shows you bug reports from debbugs.gnu.org as TODO items. It needs the debbugs package from the GNU ELPA repository. If you want to try it, you could call (org-debbugs nil '(org-mode)) You will see a list of TODO items which belong to the org-mode bugs on debbugs.gnu.org. The last link of such an item, [[Messages]], shows you all corresponding messages for that bug. If you want to see a bulk of bug reports, call (org-debbugs '(serious important normal) '(emacs)) This returns much more bugs (from the emacs project), presented as chunk of 500 TODO items. If you follow the link at the very end of the buffer, you will get the next 500 items. And so on. You can call it also interactively, via M-x org-debbugs or C-u M-x org-debbugs. Have fun! Best regards, Michael. org-debbugs.el Description: application/emacs-lisp
Re: [O] org-debbugs.el
On Fri, Sep 27, 2013 at 09:28:00PM +0200, Michael Albinus wrote: Hi, I have produced a very first shot of org-debbugs.el. It shows you bug reports from debbugs.gnu.org as TODO items. It needs the debbugs package from the GNU ELPA repository. If you want to try it, you could call (org-debbugs nil '(org-mode)) You will see a list of TODO items which belong to the org-mode bugs on debbugs.gnu.org. The last link of such an item, [[Messages]], shows you all corresponding messages for that bug. If you want to see a bulk of bug reports, call (org-debbugs '(serious important normal) '(emacs)) This returns much more bugs (from the emacs project), presented as chunk of 500 TODO items. If you follow the link at the very end of the buffer, you will get the next 500 items. And so on. You can call it also interactively, via M-x org-debbugs or C-u M-x org-debbugs. Have fun! I did not do extensive testing, but from a quick look, absolutely amazing! This package should definitely go into contrib. Thanks a lot Michael. :) -- Suvayu Open source is the future. It sets us free.
[O] Table of Contents Title header
Hi,
I am using Org-mode for writing product manuals and documentation and
exporting to PDF using the Latex Export. (I'm still using Org-Mode 7.8 as
I've been a little apprehensive about upgrading to the new Latex Export
version).
I am using the fancy header package:
#+LATEX_HEADER: \usepackage{fancyhdr}
#+LATEX_HEADER: \pagestyle{fancy}
#+LATEX_HEADER:
\fancyhead[RO,RE]{\includegraphics[width=1.5cm]{company_logo.pdf}}
It outputs a nice section header together with the company logo nicely
positioned at the top of the page.
My only problem is that I want to include a table of contents which I do as
follows in the title header:
#+OPTIONS: H:3 num:t toc:t \n:nil @:t ::t |:t ^:t -:t f:t *:t :t
However the Table of Contents section title 'Contents' overwrites the
section header 'contents' at the top of the page. Is there a way of being
able to suppress the Table of Contents title 'Contents'.
I know that in Latex one can have an additional option of how a section
header is displayed and just show a blank text. However I haven't been able
to do that.
Any suggestions would be very welcome!
Ciaran
[O] Transpose or open functions for table cells
Hi, I was wondering if there are any transpose functions for table cells; something akin to transpose-lines, or transpose-words. I am also looking for something like org-open-line, but only for a table cell. This is my use case: | col 1 | col 2 | | col 1 | col 2 | |---+---+ +---+---| | 1 | a | | 1 | a | | 2 | b | -- | 2 | b | | 3 | d | | 3 | | | 4 | e | | 4 | d | | 5 | | | 5 | e | If neither exists, any thoughts how might one go about writing one? Thanks for any ideas. -- Suvayu Open source is the future. It sets us free.
[O] how to provide feedback to the org documentation on the website?
Hi, I noticed a word that is probably wrong in the org doco online. What's the general procedure for providing feedback? It's not editable like a wiki is it? Specifically on the page http://orgmode.org/manual/Beamer-export.html Eventually, every plain list has support should read Finally, every plain list has support Jason -- Jason Lewis http://emacstragic.net signature.asc Description: OpenPGP digital signature
Re: [O] how to provide feedback to the org documentation on the website?
Hi Jason, It is editable! You can find how to register and use git for editing Worg here: http://orgmode.org/worg/worg-about.html It's actually a pleasure to work on its org-mode files. All the best, Tom Jason Lewis ja...@dickson.st writes: Hi, I noticed a word that is probably wrong in the org doco online. What's the general procedure for providing feedback? It's not editable like a wiki is it? Specifically on the page http://orgmode.org/manual/Beamer-export.html Eventually, every plain list has support should read Finally, every plain list has support Jason -- Jason Lewis http://emacstragic.net Hi, I noticed a word that is probably wrong in the org doco online. What's the general procedure for providing feedback? It's not editable like a wiki is it? Specifically on the page http://orgmode.org/manual/Beamer-export.html Eventually, every plain list has support should read Finally, every plain list has support Jason -- Thomas S. Dye http://www.tsdye.com
[O] EXPORT_FILE_NAME when exporting the entire org file ?
Hi everyone, when exporting only a subtree to pdf, we can set the output file such as: * Some headline:PROPERTIES::EXPORT_FILE_NAME: /path/filename:END: Is it possible to set the output path/filename when exporting the entire org file ? (e.g. in the heading #+OPTIONS) Thanks !Martin
Re: [O] how to provide feedback to the org documentation on the website?
t...@tsdye.com (Thomas S. Dye) writes: Jason Lewis ja...@dickson.st writes: I noticed a word that is probably wrong in the org doco online. What's the general procedure for providing feedback? It's not editable like a wiki is it? Specifically on the page http://orgmode.org/manual/Beamer-export.html Eventually, every plain list has support should read Finally, every plain list has support It is editable! You can find how to register and use git for editing Worg here: http://orgmode.org/worg/worg-about.html It's actually a pleasure to work on its org-mode files. That's true for worg files but Jason was talking about the org-mode manual. I believe that's not editable except by developers. The easiest way to make a change is to send a bug report. It's also possible to post a patch to the list - in the same way that one would provide a patch for code (with all the conditions that this implies: TINY change, FSF copyright assignment, following conventions etc.). For details, see http://orgmode.org/worg/org-contribute.html -- Nick
