Re: [Fink-users] (no subject)

2012-07-31 Thread sshah
Michael,

Thanks a lot, that helped, I think I'm able to build usbmuxd.
Steps I followed are,
mkdir build
cd build
ccmake .. (here fixed USB_INCUDE_DIR)
make
sudo make install

by the way make reported following,
"configuring usbmuxd -vUNKNOWN

also, user/local/lib/pkgconfig/libusbmuxd.pc says "Version: UNKNOWN"
(I think this is the problem Hanspeter mentioned earlier in this thread)

My guess is, if I try "fink install libimobiledevice" at this point, it will try
to rebuild usbmuxd. Is there a workaround to fix this? Thanks. 


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Re: [Fink-users] Build of libvpx fails on ML

2012-07-31 Thread Daniel Johnson

On Jul 31, 2012, at 4:23 PM, Beat Zahnd  wrote:

> Yes, same effect with just 1 build job.
> 
> Thanks, Beat
> On Jul 31, 2012, at 10:14 PM, Alexander Hansen  
> wrote:
> 
>> I'll cc the maintainer.  I know that he has Mountain Lion.
>> 
>> Did you try reducing the number of build jobs to 1?  "Unable to open
>> file..." errors frequently come up when packages aren't set up to build
>> in multiple threads (though the build worked for me with 4 build jobs on
>> 10.7/Xcode 4.4).
>> 
>> -- 
>> Alexander Hansen, Ph.D.
>> Fink User Liaison
>> My package updates: http://finkakh.wordpress.com/
> 

libvpx does indeed fail to build on 10.8. Turns out it needs GNU grep in order 
to build which I added as a BuildDepends. I also updated it to the latest 
upstream version.

Daniel


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Re: [Fink-users] Can't resolve dependency "liboctave343-gcc47-dev" for package "fits-oct343-1.0.2-1"

2012-07-31 Thread Alexander Hansen
On 7/31/12 2:23 PM, Dominique Dhumieres wrote:
> Updating to fits-oct343-1.0.2-1 on both ppc 10.5 and intel 10.6 failed with
> 
> Can't resolve dependency "liboctave343-gcc47-dev" for package
> "fits-oct343-1.0.2-1" (no matching packages/versions found)
> Exiting with failure.
> 
> TIA
> 
> Dominique
> 

Oops, I synchronized 10.7 and 10.4 a bit too much.  That's now fixed in CVS.

-- 
Alexander Hansen, Ph.D.
Fink User Liaison
My package updates: http://finkakh.wordpress.com/

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Re: [Fink-users] Failed: phase installing: wxmaxima-gtk-12.04.0-4 failed

2012-07-31 Thread Alexander Hansen
On 7/31/12 12:58 PM, Viv Kendon wrote:
> On Tue, 31 Jul 2012, Alexander Hansen wrote:
> 
>> On 7/31/12 12:34 AM, Viv Kendon wrote:
>>> This also seems repeatable, maybe a typo of some sort?
>>>
>>> /usr/bin/install -d -m 755
>>> /sw/src/fink.build/root-wxmaxima-gtk-12.04.0-4/sw/Applications
>>> cp -pR 'wxMaxima.app'
>>> '/sw/src/fink.build/root-wxmaxima-gtk-12.04.0-4/sw/Applications/'
>>> chmod -R o-w
>>> '/sw/src/fink.build/root-wxmaxima-gtk-12.04.0-4/sw/Applications/'
>>> if test -x /Developer
>>> Can't exec "if": No such file or directory at
>>> /sw/lib/perl5/Fink/Services.pm line 589,  line 1.
>>> ### execution of if failed, exit code -1
>>> ### execution of /tmp/fink.K5dPz failed, exit code 255
>>>
>>> Package manager version: 0.34.1
>>> Distribution version: selfupdate-rsync Mon Jul 30 22:15:18 2012, 10.6,
>>> x86_64
>>> Trees: local/main local/crypto stable/main stable/crypto unstable/main
>>> unstable/crypto
>>> Xcode.app: 3.2.6
>>> Xcode command-line tools: 3.2.6
>>> Max. Fink build jobs:  4
>>>
>>
>> Two issues:
>>
>> 1)  There's a bug in fink right now that affects generation of app
>> bundles.  You can work around it pending the next release by downloading
>> a new copy of PkgVersion.pm from
>>
>> https://raw.github.com/fink/fink/master/perlmod/Fink/PkgVersion.pm
>>
>> Copy that into /sw/lib/perl5/Fink.
>>
>> 2)  I make no warranty that wxmaxima-gtk will run reliably.   It worked
>> great at one point, and then switched to working only after a lot of
>> restarts, and now I haven't actually been able to get it to run.  If you
>> have any success I'd like to hear about it.
> 
> Many thanks for the help, it all built and installed without further
> problems (bundle-maxima-x11).  xmaxima appears to work fine, but
> wxmaxima cannot start/connect to the server no matter what I've tried to
> reconfigure.  It looks OK apart from that, but obviously I can't test it
> very much in its serverless state. I can't get any more useful debug
> messages out of it either.  The console gave me five copies of
> 
> 31/07/2012 20:24:48 [0x0-0x9b89b8].net.sf.wxMaxima[63477]   
> (wxmaxima:63477): Gtk-WARNING **: Unable to find default local directory
> monitor type
> 
> but I don't think that's relevant.  Comparing console output between
> wxmaxima and xmaxima, I don't think wxmaxima even tries to start/connect
> to a server, despite what it claims in its error dialog.  For xmaxima I get
> 
> 31/07/2012 20:45:36Firewall[60]wish8.5 is listening from
> 0.0.0.0:4008 proto=6
> 
> and "top" also shows an instance of sbcl, but there is clearly nothing
> similar running for wxmaxima.
> 
> cheers,
> -- Viv
> 
> Dr Viv Kendonhttp://quantum.leeds.ac.uk/~viv
> tel: +44 113 343 4864  Physics and Astronomy
> Quantum Information GroupUniversity of Leeds
> 

I've tried checking the maxima mailing list archives on this issue, too,
but nothing jumped out at me.

wxmaxima-mac gives me the following processes:

$ wxmaxima
$ ps ax | grep maxima
18126   ??  U  0:00.47
/sw/Applications/wxMaxima.app/Contents/MacOS/wxmaxima -psn_0_3961799
18154   ??  S  0:00.11 /sw/opt/sbcl-1.0.57/lib/sbcl/sbcl --core
/sw/lib/maxima/5.27.0/binary-sbcl/maxima.core --noinform
--end-runtime-options --eval (cl-user::run) --end-toplevel-options -r
:lisp (setup-client 4010)
18172 s001  S+ 0:00.00 grep maxima

Maybe wxmaxima isn't waiting long enough to connect in the gtk case.
-- 
Alexander Hansen, Ph.D.
Fink User Liaison
My package updates: http://finkakh.wordpress.com/

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Re: [Fink-users] Build of libvpx fails on ML

2012-07-31 Thread Beat Zahnd
Yes, same effect with just 1 build job.

Thanks, Beat
On Jul 31, 2012, at 10:14 PM, Alexander Hansen  
wrote:

> I'll cc the maintainer.  I know that he has Mountain Lion.
> 
> Did you try reducing the number of build jobs to 1?  "Unable to open
> file..." errors frequently come up when packages aren't set up to build
> in multiple threads (though the build worked for me with 4 build jobs on
> 10.7/Xcode 4.4).
> 
> -- 
> Alexander Hansen, Ph.D.
> Fink User Liaison
> My package updates: http://finkakh.wordpress.com/


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[Fink-users] Can't resolve dependency "liboctave343-gcc47-dev" for package "fits-oct343-1.0.2-1"

2012-07-31 Thread Dominique Dhumieres
Updating to fits-oct343-1.0.2-1 on both ppc 10.5 and intel 10.6 failed with

Can't resolve dependency "liboctave343-gcc47-dev" for package
"fits-oct343-1.0.2-1" (no matching packages/versions found)
Exiting with failure.

TIA

Dominique

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[Fink-users] Failed: phase compiling: fits-oct360-1.0.2-1 failed

2012-07-31 Thread Dominique Dhumieres

Updating to fits-oct360-1.0.2-1 failed on

Package manager version: 0.34.1
Distribution version: selfupdate-rsync Tue Jul 31 21:36:08 2012, 10.5, powerpc
Trees: local/main stable/main stable/crypto unstable/main unstable/crypto
Xcode.app: 3.1.4
Xcode command-line tools: 3.1.4
fits-oct360-1.0.2-1 is set to build with only one job.

with

...
ans = /sw/src/fink.build/fits-oct360-1.0.2-1/bld/share/octave/3.6.0/packages
mkdir (/var/tmp/oct-yrpnU0)
untar (./fits.tar, /var/tmp/oct-yrpnU0)
read_fits_image.cc: In function 'octave_value_list Fread_fits_image(const 
octave_value_list&, int)':
read_fits_image.cc:83: error: 'class std::vector >' has no member named 'data'
read_fits_image.cc:143: error: 'class std::vector >' has no member named 'data'
make: *** [read_fits_image.oct] Error 1
'make' returned the following error: make: Entering directory 
`/private/var/tmp/oct-yrpnU0/fits-1.0.2/src'
mkoctfile --verbose -Wall -L/sw/lib -lcfitsio read_fits_image.cc
oct-cxx -c -I/sw/include -I/sw/include/octave-3.6.0/octave/.. 
-I/sw/include/octave-3.6.0/octave -I/sw/include -I/sw/include 
-I/sw/include/freetype2 -I/sw/include -I/sw/include -O0 -Wall 
read_fits_image.cc -o read_fits_image.o
make: Leaving directory `/private/var/tmp/oct-yrpnU0/fits-1.0.2/src'
error: called from `pkg>configure_make' in file 
/sw/share/octave/3.6.0/m/pkg/pkg.m near line 1385, column 9
error: called from:
error:   /sw/share/octave/3.6.0/m/pkg/pkg.m at line 827, column 5
error:   /sw/share/octave/3.6.0/m/pkg/pkg.m at line 383, column 9
error:   /sw/src/fink.build/fits-oct360-1.0.2-1/bld/octave-forge-comp at line 
4, column 1
### execution of /tmp/fink.U4pf8 failed, exit code 1
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-fits-oct360-1.0.2-1
(Reading database ... 558751 files and directories currently installed.)
Removing fink-buildlock-fits-oct360-1.0.2-1 ...
Failed: phase compiling: fits-oct360-1.0.2-1 failed

TIA

Dominique

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Re: [Fink-users] Failed: phase compiling: imlib-1.9.15-1027 failed

2012-07-31 Thread Dominique Dhumieres
> I'd recommend renaming /usr/X11/bin/xmkmf to get cleaner X11 setup,
> since any Fink packages that need xmkmf use fink's xmkmf package.

It worked, thanks for the tip.

Dominique

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Re: [Fink-users] Failed: phase installing: wxmaxima-gtk-12.04.0-4failed

2012-07-31 Thread Daniel Macks
On Tue, 31 Jul 2012 20:58:59 +0100 (BST), Viv Kendon 
 wrote:

> Many thanks for the help, it all built and installed without further 
> problems (bundle-maxima-x11).  xmaxima appears to work fine, but 
> wxmaxima cannot start/connect to the server no matter what I've tried 
> to reconfigure.  It looks OK apart from that, but obviously I can't 
> test it very much in its serverless state. I can't get any more 
> useful debug messages out of it either.  The console gave me five 
> copies of
>
> 31/07/2012 20:24:48 [0x0-0x9b89b8].net.sf.wxMaxima[63477] 
> (wxmaxima:63477): Gtk-WARNING **: Unable to find default local 
> directory monitor type
>
> but I don't think that's relevant. 

I don't know anything about maxima, just want to confirm that this is 
indeed a warning that occurs from all sorts of packages on all OS X 
platforms that use certain features of glib2 (or related library 
package), related to a feature that is fairly linux-specific as far as 
I know. 

dan

  --
Daniel Macks
dma...@netspace.org



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Re: [Fink-users] Failed: phase installing: gmsh-2.6.1-1 failed

2012-07-31 Thread Viv Kendon
On Tue, 31 Jul 2012, Alexander Hansen wrote:

> On 7/31/12 12:25 AM, Viv Kendon wrote:
>> This seems to be repeatable, but might not be a gmsh
>> problem:
>>
>> [100%] Building CXX object
>> CMakeFiles/shared.dir/contrib/Tetgen1.5/predicates.cx
>> x.o
>> Linking CXX shared library libGmsh.dylib
>> ld: warning: duplicate dylib /usr/lib/libz.dylib
>> ld: warning: duplicate dylib /sw/lib/libpng.dylib
>> [100%] Built target shared
>> make -j1 verbose=1 html
>> Scanning dependencies of target html
>> Generating ../doc/texinfo/gmsh.html
>> Built target html
>> make -j1 verbose=1 info
>> Scanning dependencies of target info
>> Generating ../doc/texinfo/gmsh.info
>> Built target info
>> make -j1 verbose=1 txt
>> Scanning dependencies of target txt
>> [100%] Generating ../doc/texinfo/gmsh.txt
>> [100%] Built target txt
>> bootstrap_parent() 268435459
>> Could not get location of job overrides database.
>> launch_msg(): Socket is not connected
>> /bin/rm -rf /sw/src/fink.build/root-gmsh-2.6.1-1
>> /bin/mkdir -p /sw/src/fink.build/root-gmsh-2.6.1-1/sw
>> /bin/mkdir -p /sw/src/fink.build/root-gmsh-2.6.1-1/DEBIAN
>> /usr/sbin/chown -R fink-bld:fink-bld
>> /sw/src/fink.build/root-gmsh-2.6.1-1
>> chown: fink-bld: Invalid argument
>> ### execution of /usr/sbin/chown failed, exit code 1



> It looks more like a fink problem with the directory permissions.
>
> There's a fix for this issue queued up pending a release.  If you download
>
> https://raw.github.com/fink/fink/master/perlmod/Fink/PkgVersion.pm
>
> and
>
> https://raw.github.com/fink/fink/master/perlmod/Fink/Config.pm
>
> and copy them into /sw/lib/perl5/Fink/, that should hopefully clear this up.

many thanks, that seems to have worked, my update-all is 
past gmsh now and onto octave361 (which will take some 
time...)

-- Viv

Dr Viv Kendonhttp://quantum.leeds.ac.uk/~viv
tel: +44 113 343 4864  Physics and Astronomy
Quantum Information GroupUniversity of Leeds


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Re: [Fink-users] Build of libvpx fails on ML

2012-07-31 Thread Alexander Hansen
On 7/31/12 11:56 AM, Beat Zahnd wrote:
> Build of libvpx fails on Mountain Lion and Xcode 4.4
> Cheers, Beat
> 
> 



> sudo -u fink-bld [ENV] sh -c /tmp/fink.Yv83H
> perl -pi -e 's/-isysroot.*sdk//g' build/make/configure.sh
> perl -pi -e 's/USE_POSIX_MMAP 0/USE_POSIX_MMAP 1/' vpxenc.c
> sudo -u fink-bld [ENV] sh -c /tmp/fink.LLKwx
> /tmp/fink.dsRs8
> #!/bin/bash -ev
>   
>   let version=`uname -r | cut -d . -f 1`
> uname -r | cut -d . -f 1
>   if [ $version -gt 9 ]; then
>   let version=9
>   fi
>   
>   if [ "x86_64" = "powerpc" ]; then
>   ./configure --prefix=/sw --target=ppc32-darwin${version}-gcc
>   elif [ "x86_64" = "i386" ]; then
>   if [ $version = "8" ]; then
>   ./configure --prefix=/sw 
> --target=x86-darwin${version}-gcc --disable-postproc
>   else
>   ./configure --prefix=/sw 
> --target=x86-darwin${version}-gcc
>   fi
>   else
>   ./configure --prefix=/sw --target=x86_64-darwin${version}-gcc
>   fi
> Configuring selected codecs
>   enabling vp8_encoder
>   enabling vp8_decoder
> Configuring for target 'x86_64-darwin9-gcc'
>   enabling x86_64
>   enabling runtime_cpu_detect
>   enabling mmx
>   enabling sse
>   enabling sse2
>   enabling sse3
>   enabling ssse3
>   enabling sse4_1
>   using yasm
>   enabling postproc
> Creating makefiles for x86_64-darwin9-gcc libs
> Creating makefiles for x86_64-darwin9-gcc examples
> Creating makefiles for x86_64-darwin9-gcc docs
>   make
> [DEP] vpx_ports/x86_abi_support.asm.d
>[DEP] vp8/decoder/x86/dequantize_mmx.asm.d
> [DEP] vp8/common/x86/postproc_sse2.asm.d
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> [DEP] vp8/common/x86/subpixel_ssse3.asm.d
> [DEP] vp8/common/x86/postproc_mmx.asm.d
> [DEP] vp8/common/x86/iwalsh_sse2.asm.d
> [DEP] vp8/common/x86/loopfilter_sse2.asm.d
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> [DEP] vp8/common/x86/recon_sse2.asm.d
> .d
>   [DEP] 
> vp8/common/x86/loopfilter_mmx.asm.d
> [DEP] vp8/common/x86/idctllm_sse2.asm.d
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> [DEP] vp8/common/x86/subpixel_mmx.asm.d
> [DEP] vp8/common/x86/recon_mmx.asm.d
> [DEP] vp8/common/x86/iwalsh_mmx.asm.d
> [DEP] vp8/common/x86/idctllm_mmx.asm.d
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalidinvalid
>
> egrep: repetition-operator operand invalid
> [DEP] vp8/encoder/x86/ssim_opt.asm.d
> [DEP] vp8/encoder/x86/encodeopt.asm.d
> [DEP] vp8/encoder/x86/quantize_mmx.asm.d
> [DEP] vp8/encoder/x86/quantize_sse4.asm.d
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> [DEP] vp8/encoder/x86/sad_sse4.asm.d
> [DEP] vp8/encoder/x86/quantize_ssse3.asm.d
> sm.d
>[DEP] 
> vp8/encoder/x86/sad_ssse3.asm.d
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> [DEP] vp8/encoder/x86/sad_sse3.asm.d
> [DEP] vp8/encoder/x86/temporal_filter_apply_sse2.asm.d
> [DEP] vp8/encoder/x86/subtract_sse2.asm.d
> [DEP] vp8/encoder/x86/quantize_sse2.asm.d
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> [DEP] vp8/encoder/x86/fwalsh_sse2.asm.d
> [DEP] vp8/encoder/x86/sad_sse2.asm.d
> se2.asm.d
>  [DEP] 
> vp8/encoder/x86/dct_sse2.asm.d
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> egrep: repetition-operator operand invalid
> [DEP] vp8/encoder/x86/subtract_mmx.asm.d
> [DEP] 
> vp8/encoder/x86/sad_mmx.asm.d
> [DEP] vp8/encoder/x86/variance_impl_mmx.asm.d
> egrep: repetition-operator operand invalid
> egrep:repetition-operator operand invalid 
>   
>  [DEP] vpx_config.c.d
> [DEP] vpx_ports/x86_cpuid.c.d
> [DEP] vp8/decoder/x86/idct_blk_sse2.c.d
> egrep: repetition-operator operand invalid
> [DEP] vp8/decoder/x86/idct_

Re: [Fink-users] Failed: phase installing: wxmaxima-gtk-12.04.0-4 failed

2012-07-31 Thread Viv Kendon
On Tue, 31 Jul 2012, Alexander Hansen wrote:

> On 7/31/12 12:34 AM, Viv Kendon wrote:
>> This also seems repeatable, maybe a typo of some sort?
>>
>> /usr/bin/install -d -m 755
>> /sw/src/fink.build/root-wxmaxima-gtk-12.04.0-4/sw/Applications
>> cp -pR 'wxMaxima.app'
>> '/sw/src/fink.build/root-wxmaxima-gtk-12.04.0-4/sw/Applications/'
>> chmod -R o-w
>> '/sw/src/fink.build/root-wxmaxima-gtk-12.04.0-4/sw/Applications/'
>> if test -x /Developer
>> Can't exec "if": No such file or directory at
>> /sw/lib/perl5/Fink/Services.pm line 589,  line 1.
>> ### execution of if failed, exit code -1
>> ### execution of /tmp/fink.K5dPz failed, exit code 255
>>
>> Package manager version: 0.34.1
>> Distribution version: selfupdate-rsync Mon Jul 30 22:15:18 2012, 10.6,
>> x86_64
>> Trees: local/main local/crypto stable/main stable/crypto unstable/main
>> unstable/crypto
>> Xcode.app: 3.2.6
>> Xcode command-line tools: 3.2.6
>> Max. Fink build jobs:  4
>>
>
> Two issues:
>
> 1)  There's a bug in fink right now that affects generation of app
> bundles.  You can work around it pending the next release by downloading
> a new copy of PkgVersion.pm from
>
> https://raw.github.com/fink/fink/master/perlmod/Fink/PkgVersion.pm
>
> Copy that into /sw/lib/perl5/Fink.
>
> 2)  I make no warranty that wxmaxima-gtk will run reliably.   It worked
> great at one point, and then switched to working only after a lot of
> restarts, and now I haven't actually been able to get it to run.  If you
> have any success I'd like to hear about it.

Many thanks for the help, it all built and installed without 
further problems (bundle-maxima-x11).  xmaxima appears to 
work fine, but wxmaxima cannot start/connect to the server 
no matter what I've tried to reconfigure.  It looks OK apart 
from that, but obviously I can't test it very much in its 
serverless state. I can't get any more useful debug messages 
out of it either.  The console gave me five copies of

31/07/2012 20:24:48 
[0x0-0x9b89b8].net.sf.wxMaxima[63477]   (wxmaxima:63477): 
Gtk-WARNING **: Unable to find default local directory 
monitor type

but I don't think that's relevant.  Comparing console output 
between wxmaxima and xmaxima, I don't think wxmaxima even 
tries to start/connect to a server, despite what it claims 
in its error dialog.  For xmaxima I get

31/07/2012 20:45:36 Firewall[60]wish8.5 is listening 
from 0.0.0.0:4008 proto=6

and "top" also shows an instance of sbcl, but there is 
clearly nothing similar running for wxmaxima.

cheers,
-- Viv

Dr Viv Kendonhttp://quantum.leeds.ac.uk/~viv
tel: +44 113 343 4864  Physics and Astronomy
Quantum Information GroupUniversity of Leeds


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Re: [Fink-users] Failed: phase installing: gmsh-2.6.1-1 failed

2012-07-31 Thread Alexander Hansen
On 7/31/12 12:25 AM, Viv Kendon wrote:
> This seems to be repeatable, but might not be a gmsh 
> problem:
> 
> [100%] Building CXX object 
> CMakeFiles/shared.dir/contrib/Tetgen1.5/predicates.cx
> x.o
> Linking CXX shared library libGmsh.dylib
> ld: warning: duplicate dylib /usr/lib/libz.dylib
> ld: warning: duplicate dylib /sw/lib/libpng.dylib
> [100%] Built target shared
> make -j1 verbose=1 html
> Scanning dependencies of target html
> Generating ../doc/texinfo/gmsh.html
> Built target html
> make -j1 verbose=1 info
> Scanning dependencies of target info
> Generating ../doc/texinfo/gmsh.info
> Built target info
> make -j1 verbose=1 txt
> Scanning dependencies of target txt
> [100%] Generating ../doc/texinfo/gmsh.txt
> [100%] Built target txt
> bootstrap_parent() 268435459
> Could not get location of job overrides database.
> launch_msg(): Socket is not connected
> /bin/rm -rf /sw/src/fink.build/root-gmsh-2.6.1-1
> /bin/mkdir -p /sw/src/fink.build/root-gmsh-2.6.1-1/sw
> /bin/mkdir -p /sw/src/fink.build/root-gmsh-2.6.1-1/DEBIAN
> /usr/sbin/chown -R fink-bld:fink-bld 
> /sw/src/fink.build/root-gmsh-2.6.1-1
> chown: fink-bld: Invalid argument
> ### execution of /usr/sbin/chown failed, exit code 1
> Removing runtime build-lock...
> Removing build-lock package...
> /sw/bin/dpkg-lockwait -r fink-buildlock-gmsh-2.6.1-1
> (Reading database ... 340803 files and directories currently 
> installed.)
> Removing fink-buildlock-gmsh-2.6.1-1 ...
> bootstrap_parent() 268435459
> Could not get location of job overrides database.
> launch_msg(): Socket is not connected
> bootstrap_parent() 268435459
> Could not get location of job overrides database.
> launch_msg(): Socket is not connected
> 
> ...
> 
> Package manager version: 0.34.1
> Distribution version: selfupdate-rsync Mon Jul 30 21:13:30 
> 2012, 10.6, x86_64
> Trees: local/main local/crypto stable/main stable/crypto 
> unstable/main unstable/crypto
> Xcode.app: 3.2.6
> Xcode command-line tools: 3.2.6
> Max. Fink build jobs:  4
> 
> Note that other similar chown commands work fine:
> 
> grep chown fua120730-2.log
> /usr/sbin/chown -R fink-bld:fink-bld 
> /sw/src/fink.build/root-fontconfig2-dev-2.10.1-1
> /usr/sbin/chown -R fink-bld:fink-bld 
> /sw/src/fink.build/root-fontconfig2-shlibs-2.10.1-1
> /usr/sbin/chown -R fink-bld:fink-bld 
> /sw/src/fink.build/root-fontconfig-config-2.10.1-1
> /usr/sbin/chown -R fink-bld:fink-bld 
> /sw/src/fink.build/root-gmsh-2.6.1-1
> chown: fink-bld: Invalid argument
> 
> and
> 
> ls -ltr /sw/src/fink.build/
> 0 drwxr-xr-x 3 fink-bld fink-bld  1 Jul 29 21:59 octave-atlas-x11-3.6.1-7/
> 0 drwxr-xr-x 3 root admin57 Jul 30 21:29 ../
> 0 drwxr-xr-x 3 fink-bld fink-bld  1 Jul 30 22:16 gmsh-2.6.1-1/
> 0 drwxr-xr-x 4 root admin 1 Jul 30 22:24 root-gmsh-2.6.1-1/
> 
> TIA
> -- Viv
> 
> Dr Viv Kendonhttp://quantum.leeds.ac.uk/~viv
> tel: +44 113 343 4864  Physics and Astronomy
> Quantum Information GroupUniversity of Leeds
> 
> 

It looks more like a fink problem with the directory permissions.

There's a fix for this issue queued up pending a release.  If you download

https://raw.github.com/fink/fink/master/perlmod/Fink/PkgVersion.pm

and

https://raw.github.com/fink/fink/master/perlmod/Fink/Config.pm

and copy them into /sw/lib/perl5/Fink/, that should hopefully clear this up.
-- 
Alexander Hansen, Ph.D.
Fink User Liaison
My package updates: http://finkakh.wordpress.com/

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Re: [Fink-users] Failed: phase installing: wxmaxima-gtk-12.04.0-4 failed

2012-07-31 Thread Alexander Hansen
On 7/31/12 12:34 AM, Viv Kendon wrote:
> This also seems repeatable, maybe a typo of some sort?
> 
> /usr/bin/install -d -m 755
> /sw/src/fink.build/root-wxmaxima-gtk-12.04.0-4/sw/Applications
> cp -pR 'wxMaxima.app'
> '/sw/src/fink.build/root-wxmaxima-gtk-12.04.0-4/sw/Applications/'
> chmod -R o-w
> '/sw/src/fink.build/root-wxmaxima-gtk-12.04.0-4/sw/Applications/'
> if test -x /Developer
> Can't exec "if": No such file or directory at
> /sw/lib/perl5/Fink/Services.pm line 589,  line 1.
> ### execution of if failed, exit code -1
> ### execution of /tmp/fink.K5dPz failed, exit code 255
> 
> Package manager version: 0.34.1
> Distribution version: selfupdate-rsync Mon Jul 30 22:15:18 2012, 10.6,
> x86_64
> Trees: local/main local/crypto stable/main stable/crypto unstable/main
> unstable/crypto
> Xcode.app: 3.2.6
> Xcode command-line tools: 3.2.6
> Max. Fink build jobs:  4
> 
> TIA
> -- Viv
> 
> Dr Viv Kendonhttp://quantum.leeds.ac.uk/~viv
> tel: +44 113 343 4864  Physics and Astronomy
> Quantum Information GroupUniversity of Leeds
> 

Two issues:

1)  There's a bug in fink right now that affects generation of app
bundles.  You can work around it pending the next release by downloading
a new copy of PkgVersion.pm from

https://raw.github.com/fink/fink/master/perlmod/Fink/PkgVersion.pm

Copy that into /sw/lib/perl5/Fink.

2)  I make no warranty that wxmaxima-gtk will run reliably.   It worked
great at one point, and then switched to working only after a lot of
restarts, and now I haven't actually been able to get it to run.  If you
have any success I'd like to hear about it.

-- 
Alexander Hansen, Ph.D.
Fink User Liaison
My package updates: http://finkakh.wordpress.com/

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Re: [Fink-users] graphviz-dev missing in 10.8 branch

2012-07-31 Thread Martin Costabel
On 31/07/12 10:08, Attila Krasznahorkay wrote:
> Hi Alexander,
>
> Okay, after I moved graphviz.patch in the right place, now the installation 
> almost finished.
>
> Now it fails in compiling root5 itself, with the following messages:
>
> clang++ -O2 -m64 -pipe -Wshadow -W -Wall -Woverloaded-virtual -fsigned-char 
> -fno-common -Iinclude -DR__HAVE_CONFIG -pthread -I/sw/include -o 
> graf2d/x11/src/TGX11.o -c 
> /sw/src/fink.build/root5-5.34.00-11/root/graf2d/x11/src/TGX11.cxx
> In file included from 
> /sw/src/fink.build/root5-5.34.00-11/root/graf2d/x11/src/GX11Gui.cxx:32:
> include/TGX11.h:34:10: fatal error: 'X11/cursorfont.h' file not found
> #include 

This is a bug in the package sources (missing -I/usr/X11/include) that 
will require some nontrivial fix. It is revealed by the disappearance in 
10.8 of the symlink /usr/include/X11->/usr/X11/include/X11. There are 
other packages touched by this; I am currently fighting with the texmacs 
build system trying to convince it to place X11 include and lib 
directories at the right places.

-- 
Martin


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Re: [Fink-users] graphviz-dev missing in 10.8 branch

2012-07-31 Thread Attila Krasznahorkay
Hi Alexander,

Okay, after I moved graphviz.patch in the right place, now the installation 
almost finished.

Now it fails in compiling root5 itself, with the following messages:

clang++ -O2 -m64 -pipe -Wshadow -W -Wall -Woverloaded-virtual -fsigned-char 
-fno-common -Iinclude -DR__HAVE_CONFIG -pthread -I/sw/include -o 
graf2d/x11/src/TGX11.o -c 
/sw/src/fink.build/root5-5.34.00-11/root/graf2d/x11/src/TGX11.cxx
In file included from 
/sw/src/fink.build/root5-5.34.00-11/root/graf2d/x11/src/GX11Gui.cxx:32:
include/TGX11.h:34:10: fatal error: 'X11/cursorfont.h' file not found
#include 
 ^
bin/rmkdepend -R -fgraf2d/x11/src/gifdecode.d -Y -w 1000 -- -m64 -pipe -Wshadow 
-W -Wall -fsigned-char -fno-common -Iinclude -DR__HAVE_CONFIG   -pthread -- 
/sw/src/fink.build/root5-5.34.00-11/root/graf2d/x11/src/gifdecode.c
clang -O2 -m64 -pipe -Wshadow -W -Wall -fsigned-char -fno-common -Iinclude 
-DR__HAVE_CONFIG   -pthread -o graf2d/x11/src/gifdecode.o -c 
/sw/src/fink.build/root5-5.34.00-11/root/graf2d/x11/src/gifdecode.c
In file included from 
/sw/src/fink.build/root5-5.34.00-11/root/graf2d/x11/src/TGX11.cxx:26:
include/TGX11.h:34:10: fatal error: 'X11/cursorfont.h' file not found
#include 
 ^
bin/rmkdepend -R -fgraf2d/x11/src/gifencode.d -Y -w 1000 -- -m64 -pipe -Wshadow 
-W -Wall -fsigned-char -fno-common -Iinclude -DR__HAVE_CONFIG   -pthread -- 
/sw/src/fink.build/root5-5.34.00-11/root/graf2d/x11/src/gifencode.c
clang -O2 -m64 -pipe -Wshadow -W -Wall -fsigned-char -fno-common -Iinclude 
-DR__HAVE_CONFIG   -pthread -o graf2d/x11/src/gifencode.o -c 
/sw/src/fink.build/root5-5.34.00-11/root/graf2d/x11/src/gifencode.c
1 error generated.
make: *** [graf2d/x11/src/GX11Gui.o] Error 1
make: *** Waiting for unfinished jobs
1 error generated.
make: *** [graf2d/x11/src/TGX11.o] Error 1
### execution of /tmp/fink.1cVSu failed, exit code 2
### execution of /tmp/fink.3gx6d failed, exit code 2

I'm including Remi, as this should be something for him to look at.

I looked around in /usr/X11R6/include and /sw/include, but didn't find this 
include that the source files complain about. Interestingly enough when I 
compiled ROOT by hand, it didn't miss this header. It had some other issues, 
but it didn't miss this particular header. :-P

In any case, I think it would be safe to update the graphviz description files, 
as that package did manage to build without problems on my system.

Cheers,
 Attila

On Jul 29, 2012, at 9:52 PM, Alexander Hansen  
wrote:

> On 7/29/12 12:41 PM, Alexander Hansen wrote:
>> On 7/29/12 12:28 PM, Attila Krasznahorkay wrote:
>>> Hi Alexander,
>>> 
>>> This should be the full command, and then the failure:
>>> 
>>> g++ -DHAVE_CONFIG_H -DNDEBUG -I. -I. -I../../../.. -I. 
>>> -I../../../../include -I../../../../ndb/include -I../../../../include 
>>> -I../../../../mysys -I../../../../ndb/include 
>>> -I../../../../ndb/include/util -I../../../../ndb/include/portlib 
>>> -I../../../../ndb/include/logger -I/sw/include -DDBUG_OFF -Wimplicit 
>>> -Wreturn-type -Wswitch -Wtrigraphs -Wcomment -W -Wchar-subscripts -Wformat 
>>> -Wparentheses -Wsign-compare -Wwrite-strings -Woverloaded-virtual 
>>> -Wsign-promo -Wreorder -Wctor-dtor-privacy -Wnon-virtual-dtor 
>>> -felide-constructors -fno-exceptions -fno-rtti -O3 -fno-omit-frame-pointer 
>>> -g -fno-implicit-templates -fno-exceptions -fno-rtti -D_P1003_1B_VISIBLE 
>>> -DSIGNAL_WITH_VIO_CLOSE -DSIGNALS_DONT_BREAK_READ -DIGNORE_SIGHUP_SIGQUIT 
>>> -c Parser.cpp  -fno-common -DPIC -o .libs/Parser.o
>>> clang: warning: argument unused during compilation: 
>>> '-fno-implicit-templates'
>>> In file included from Parser.cpp:19:
>>> ../../../../ndb/include/util/Parser.hpp:253:16: error: 'm_breakOnCmd' is a 
>>> private member of 'ParserImpl'
>>>  return impl->m_breakOnCmd;
>>>   ^
>>> ../../../../ndb/include/util/Parser.hpp:152:8: note: declared private here
>>>  bool m_breakOnCmd;
>>>   ^
>>> ../../../../ndb/include/util/Parser.hpp:260:9: error: 'm_breakOnCmd' is a 
>>> private member of 'ParserImpl'
>>>  impl->m_breakOnCmd = v;
>>>^
>>> ../../../../ndb/include/util/Parser.hpp:152:8: note: declared private here
>>>  bool m_breakOnCmd;
>>>   ^
>>> ../../../../ndb/include/util/Parser.hpp:267:16: error: 'm_breakOnEmpty' is 
>>> a private member of 'ParserImpl'
>>>  return impl->m_breakOnEmpty;
>>>   ^
>>> ../../../../ndb/include/util/Parser.hpp:151:8: note: declared private here
>>>  bool m_breakOnEmpty;
>>>   ^
>>> ../../../../ndb/include/util/Parser.hpp:273:9: error: 'm_breakOnEmpty' is a 
>>> private member of 'ParserImpl'
>>>  impl->m_breakOnEmpty = v;
>>>^
>>> ../../../../ndb/include/util/Parser.hpp:151:8: note: declared private here
>>>  bool m_breakOnEmpty;
>>>   ^
>>> ../../../../ndb/include/util/Parser.hpp:280:16: error: 
>>> 'm_breakOnInvalidArg' is a private member of 'ParserImpl'
>>>  return impl->m_breakOnInvalidArg;
>>>   ^
>>> ../../../../ndb/include/util/Par

Re: [Fink-users] Fink-users Digest, Vol 75, Issue 25

2012-07-31 Thread Schindler Karl-Michael
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA1

> Message: 5
> Date: Tue, 31 Jul 2012 02:23:02 + (UTC)
> From: sshah 
> Subject: Re: [Fink-users] "fink list libimobiledevice" does not find
>   findlib on Mac OS X 10.7.4
> To: fink-users@lists.sourceforge.net
> Message-ID: 
> Content-Type: text/plain; charset=us-ascii
> 
> Schindler Karl-Michael  web.de> writes:
>> Am 20.07.2012 um 02:06 schrieb Hanspeter Niederstrasser:
>>> On 7/19/2012 7:43 PM, Alexander Hansen wrote:
 On 7/19/12 4:16 PM, sshah wrote:
> Hi there,
> 
> I'm new to fink so if this is not the right forum, please point me to the
> appropriate forum.
> 
> Mac OS X 10.7.4
> fink: 0.34
> 
> I tried "dselect",
 
 dselect doesn't really do much for 10.6 or 10.7, since there are no
 official binary distributions for those platforms.
 
> "fink select libimobiledevice"
 
 It helps if you use command verbs that actually exist 
 
> as well as "fink install libimobiledevice", but none of them
> list or install libimobiledevice. Is 10.7.4 supported?
> 
> Thanks,
> sshah
 
 According to
 
 http://pdb.finkproject.org/pdb/package.php/libimobiledevice
 
 it is not yet available for 10.7.  The maintainer (cc'ed) may have more
 insight as to why it isn't available.
>>> 
>>> Karl-Michael,
>>> 
>>> usbmuxd (a dependency for libimobiledevice) needs an extra flag to
>>> successfully build (tested on
>>> 10.6/i386 and also on a locally copied 10.7 info).
>>> 
>>> -DUSB_INCLUDE_DIR=%p/include/libusb-1.0 must be added to the cmake command
>>> in order to find the
>>> libusb1 header.  This allows the build to finish.  Otherwise it fails during
>>> the cmake command.
>>> 
>>> However, even after this is patched, the libusbmuxd.pc file is not formed
>>> correctly, and the Version: field is given a value of "UNKNOWN".  
>>> This causes libimobiledevice to then fail during ./configure when
>>> trying to find usbmuxd.  usbmuxd's self-version check seems broken
>>> (see Modules/VersionTag.cmake and Modules/describe.sh)
>>> 
>>> Hanspeter
>> 
>> I am too busy at work at the moment to look at this right away. I'll have a
>> look into it in about 2 weeks. Sorry.
>> 
>> Michael
> 
> Thanks Hanspeter and Michael. I'm trying to "fink install libimobiledevice" on
> 10.6 and now having problems with usbmuxd (USB_INCLUDE_DIR gets set to
> USB_INCLUDE_DIR-NOTFOUND). I just reread Hanspeter's reply and realized that
> usbmuxd is not ready for 10.6 too. I tried setting USB_INCLUDE_DIR to
> /sw/include/libusb-1.0, but when I attempt "fink install usbmuxd", cmake again
> reports USB_INCLUDE_DIR-NOTFOUND. I tried 2 different ways (a) edit
> CMakeCache.txt and (b) ccmake -D USB_INCLUDE_DIR:PATH=/sw/include/libusb-1.0
> but it fails in both the cases. After "fink install usbmuxd" CMakeCache.txt 
> loses my
> changes. Am I modifying wrong CMakeLists.txt (via ccmake)? If so if you can 
> tell
> me which one I need to modify (there are a few under usbmuxd's build 
> directory).
> I will appreciate any pointers to make it work on my system, so if there is a
> workaround to take care of libusbmuxd.pc file too - please let me know. I'm
> ready to  try even if official build is not yet ready. THANKS A LOT.  

I started to look at the issues with usbmuxd and libimobiledevice.
One point is that there are substantial patches in their repositories, which 
are 
not part of the latest source tarballs. I usually include that directly in the 
patchscript. 
However, they are larger and are better included as a patchfile. 
Actually, I was hoping that they release a new version soon, but this does not 
seem 
to be the case. i have to completely rework usbmuxd and libimobile. 
Sorry for the inconvenience. In case you want to try yourself, i found the 
interactive ccmake helpful in the struggle with cmake, where you have a list of 
the variables, which you can set.
  mkdir build
  cd build
  ccmake ..
then toggle on the expert modus, which shows the complete list of variables.
In case something goes wrong, simply delete the directory build and you can 
start 
from a clean setup.

I hope to make some progress within this week.

Michael.
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Comment: GPGTools - http://gpgtools.org

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[Fink-users] Failed: phase installing: wxmaxima-gtk-12.04.0-4 failed

2012-07-31 Thread Viv Kendon
This also seems repeatable, maybe a typo of some sort?

/usr/bin/install -d -m 755 
/sw/src/fink.build/root-wxmaxima-gtk-12.04.0-4/sw/Applications
cp -pR 'wxMaxima.app' 
'/sw/src/fink.build/root-wxmaxima-gtk-12.04.0-4/sw/Applications/'
chmod -R o-w 
'/sw/src/fink.build/root-wxmaxima-gtk-12.04.0-4/sw/Applications/'
if test -x /Developer
Can't exec "if": No such file or directory at 
/sw/lib/perl5/Fink/Services.pm line 589,  line 1.
### execution of if failed, exit code -1
### execution of /tmp/fink.K5dPz failed, exit code 255

Package manager version: 0.34.1
Distribution version: selfupdate-rsync Mon Jul 30 22:15:18 
2012, 10.6, x86_64
Trees: local/main local/crypto stable/main stable/crypto 
unstable/main unstable/crypto
Xcode.app: 3.2.6
Xcode command-line tools: 3.2.6
Max. Fink build jobs:  4

TIA
-- Viv

Dr Viv Kendonhttp://quantum.leeds.ac.uk/~viv
tel: +44 113 343 4864  Physics and Astronomy
Quantum Information GroupUniversity of Leeds


--
Live Security Virtual Conference
Exclusive live event will cover all the ways today's security and 
threat landscape has changed and how IT managers can respond. Discussions 
will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/
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[Fink-users] Failed: phase installing: gmsh-2.6.1-1 failed

2012-07-31 Thread Viv Kendon
This seems to be repeatable, but might not be a gmsh 
problem:

[100%] Building CXX object 
CMakeFiles/shared.dir/contrib/Tetgen1.5/predicates.cx
x.o
Linking CXX shared library libGmsh.dylib
ld: warning: duplicate dylib /usr/lib/libz.dylib
ld: warning: duplicate dylib /sw/lib/libpng.dylib
[100%] Built target shared
make -j1 verbose=1 html
Scanning dependencies of target html
Generating ../doc/texinfo/gmsh.html
Built target html
make -j1 verbose=1 info
Scanning dependencies of target info
Generating ../doc/texinfo/gmsh.info
Built target info
make -j1 verbose=1 txt
Scanning dependencies of target txt
[100%] Generating ../doc/texinfo/gmsh.txt
[100%] Built target txt
bootstrap_parent() 268435459
Could not get location of job overrides database.
launch_msg(): Socket is not connected
/bin/rm -rf /sw/src/fink.build/root-gmsh-2.6.1-1
/bin/mkdir -p /sw/src/fink.build/root-gmsh-2.6.1-1/sw
/bin/mkdir -p /sw/src/fink.build/root-gmsh-2.6.1-1/DEBIAN
/usr/sbin/chown -R fink-bld:fink-bld 
/sw/src/fink.build/root-gmsh-2.6.1-1
chown: fink-bld: Invalid argument
### execution of /usr/sbin/chown failed, exit code 1
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-gmsh-2.6.1-1
(Reading database ... 340803 files and directories currently 
installed.)
Removing fink-buildlock-gmsh-2.6.1-1 ...
bootstrap_parent() 268435459
Could not get location of job overrides database.
launch_msg(): Socket is not connected
bootstrap_parent() 268435459
Could not get location of job overrides database.
launch_msg(): Socket is not connected

...

Package manager version: 0.34.1
Distribution version: selfupdate-rsync Mon Jul 30 21:13:30 
2012, 10.6, x86_64
Trees: local/main local/crypto stable/main stable/crypto 
unstable/main unstable/crypto
Xcode.app: 3.2.6
Xcode command-line tools: 3.2.6
Max. Fink build jobs:  4

Note that other similar chown commands work fine:

grep chown fua120730-2.log
/usr/sbin/chown -R fink-bld:fink-bld 
/sw/src/fink.build/root-fontconfig2-dev-2.10.1-1
/usr/sbin/chown -R fink-bld:fink-bld 
/sw/src/fink.build/root-fontconfig2-shlibs-2.10.1-1
/usr/sbin/chown -R fink-bld:fink-bld 
/sw/src/fink.build/root-fontconfig-config-2.10.1-1
/usr/sbin/chown -R fink-bld:fink-bld 
/sw/src/fink.build/root-gmsh-2.6.1-1
chown: fink-bld: Invalid argument

and

ls -ltr /sw/src/fink.build/
0 drwxr-xr-x 3 fink-bld fink-bld  1 Jul 29 21:59 octave-atlas-x11-3.6.1-7/
0 drwxr-xr-x 3 root admin57 Jul 30 21:29 ../
0 drwxr-xr-x 3 fink-bld fink-bld  1 Jul 30 22:16 gmsh-2.6.1-1/
0 drwxr-xr-x 4 root admin 1 Jul 30 22:24 root-gmsh-2.6.1-1/

TIA
-- Viv

Dr Viv Kendonhttp://quantum.leeds.ac.uk/~viv
tel: +44 113 343 4864  Physics and Astronomy
Quantum Information GroupUniversity of Leeds


--
Live Security Virtual Conference
Exclusive live event will cover all the ways today's security and 
threat landscape has changed and how IT managers can respond. Discussions 
will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/
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