Hi Doug,
That works! Thanks! I don't know why it didn't the first time (I can't find
the old command line). But this command line works (in case anybody else
wants to do the same thing):
[LMR in ~ ] mri_cor2label --i
/home/lmr/ANALYSIS/binary_pmaps/lh_binarymap_area_covar8.mgh
--id 1
--l /home/lmr/ANALYSIS/binary_pmaps/lh_binarymap_area_covar8
--surf fsaverage lh
LMR
Douglas N Greve
<http://www.mail-archive.com/search?l=freesurfer@nmr.mgh.harvard.edu&q=from:%22Douglas+N+Greve%22>
Fri,
11 Jul 2014 11:02:38 -0700
<http://www.mail-archive.com/search?l=freesurfer@nmr.mgh.harvard.edu&q=date:20140711>
use mri_cor2label with the --surf option
On 07/11/2014 01:36 PM, Bruce Fischl wrote:
> Hi Lars
>
> this would be pretty simple to do in matlab, but I'm not sure if we
> have anything do to it otherwise (Doug might)
>
> cheers
> Bruce
> On Fri, 11 Jul 2014, Lars M. Rimol wrote:
>
>> Hi,
>>
>> Is there a way to take a binary .mgh file (surface file with 163842
>> vertices containing 1 or
>> 0) and create a label such that the ones in the input file == the
>> label? For instance, to
>> create a label from a p-map.
>>
>> I tried using mri_cor2label based on previous responses on the
>> mailing list, but that seems
>> to produce volumes and I'm not really sure what it does anyway...
>>
>>
>> Thank you!
>>
>>
>>
>> --
>> yours,
>> Lars M. Rimol, PhD
>> St. Olavs Hospital
>> Trondheim,
>> Norway
>>
>>
>
>
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Bruce
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yours,
Lars M. Rimol, PhD
St. Olavs Hospital
Trondheim,
Norway
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