Re: [Freesurfer] loading qdec.table.dat error
Thank you Nick, Now I have another error: Loading data table /Applications/freesurfer/subjects/group_analysis/qdec/qdec.table.dat... Number of columns: 384 fsid column:1 Number of factors: 383 Number of subjects: 0 ERROR: QdecDataTable::Load: number of subjects = 0 Error loading the data table. Although there are just 3 columns and 126 subjects.Maybe I do something wrong when creating the file, therefore here are my steps: 1. Create table it in MS Excel, save it as tab-delimited qdec.table.txt 2. Open qdec.table.txt and end one carriage return in the end to prevent problem described above 3. change .txt into .dat Am I doing something wrong? Thanks, Tanja. On Sat, May 21, 2011 at 6:09 PM, Nick Schmansky ni...@nmr.mgh.harvard.edu wrote: I think you might need to add an extra carriage return at the end of the last line. in other words, your cursor should go an empty line at the bottom of the file. n. On Sat, 2011-05-21 at 14:34 +0200, Tetiana Dadakova wrote: Dear list, I am trying to load qdec.table.dat file using qdec, and get the following error: Loading data table /Applications/freesurfer/subjects/group_analysis/qdec/qdec.table.dat... QdecDataTable::Load: will attempt to open as Mac text file... Number of columns: 3 fsid column: 1 Number of factors: 2 Number of subjects: 126 ERROR: QdecDataTable::Load: problem parsing file /Applications/freesurfer/subjects/group_analysis/qdec/qdec.table.dat This line did not appear to end with a newline: PAT_ViOl 25 pat Error loading the data table. This is the last line in the file and therefore there is no new line after it. What can cause this error? Thank you, Tanja. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Re: [Freesurfer] loading qdec.table.dat error
Ok, now everything works. I just opened the file in terminal using pico and saved it. On Mon, May 23, 2011 at 9:43 AM, Tetiana Dadakova tetian...@gmail.com wrote: Thank you Nick, Now I have another error: Loading data table /Applications/freesurfer/subjects/group_analysis/qdec/qdec.table.dat... Number of columns: 384 fsid column: 1 Number of factors: 383 Number of subjects: 0 ERROR: QdecDataTable::Load: number of subjects = 0 Error loading the data table. Although there are just 3 columns and 126 subjects.Maybe I do something wrong when creating the file, therefore here are my steps: 1. Create table it in MS Excel, save it as tab-delimited qdec.table.txt 2. Open qdec.table.txt and end one carriage return in the end to prevent problem described above 3. change .txt into .dat Am I doing something wrong? Thanks, Tanja. On Sat, May 21, 2011 at 6:09 PM, Nick Schmansky ni...@nmr.mgh.harvard.edu wrote: I think you might need to add an extra carriage return at the end of the last line. in other words, your cursor should go an empty line at the bottom of the file. n. On Sat, 2011-05-21 at 14:34 +0200, Tetiana Dadakova wrote: Dear list, I am trying to load qdec.table.dat file using qdec, and get the following error: Loading data table /Applications/freesurfer/subjects/group_analysis/qdec/qdec.table.dat... QdecDataTable::Load: will attempt to open as Mac text file... Number of columns: 3 fsid column: 1 Number of factors: 2 Number of subjects: 126 ERROR: QdecDataTable::Load: problem parsing file /Applications/freesurfer/subjects/group_analysis/qdec/qdec.table.dat This line did not appear to end with a newline: PAT_ViOl 25 pat Error loading the data table. This is the last line in the file and therefore there is no new line after it. What can cause this error? Thank you, Tanja. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
[Freesurfer] loading qdec.table.dat error
Dear list, I am trying to load qdec.table.dat file using qdec, and get the following error: Loading data table /Applications/freesurfer/subjects/group_analysis/qdec/qdec.table.dat... QdecDataTable::Load: will attempt to open as Mac text file... Number of columns: 3 fsid column:1 Number of factors: 2 Number of subjects: 126 ERROR: QdecDataTable::Load: problem parsing file /Applications/freesurfer/subjects/group_analysis/qdec/qdec.table.dat This line did not appear to end with a newline: PAT_ViOl25 pat Error loading the data table. This is the last line in the file and therefore there is no new line after it. What can cause this error? Thank you, Tanja. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Re: [Freesurfer] loading qdec.table.dat error
I think you might need to add an extra carriage return at the end of the last line. in other words, your cursor should go an empty line at the bottom of the file. n. On Sat, 2011-05-21 at 14:34 +0200, Tetiana Dadakova wrote: Dear list, I am trying to load qdec.table.dat file using qdec, and get the following error: Loading data table /Applications/freesurfer/subjects/group_analysis/qdec/qdec.table.dat... QdecDataTable::Load: will attempt to open as Mac text file... Number of columns: 3 fsid column:1 Number of factors: 2 Number of subjects: 126 ERROR: QdecDataTable::Load: problem parsing file /Applications/freesurfer/subjects/group_analysis/qdec/qdec.table.dat This line did not appear to end with a newline: PAT_ViOl25 pat Error loading the data table. This is the last line in the file and therefore there is no new line after it. What can cause this error? Thank you, Tanja. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
