Using trjconv -ur compact -pbc atom worked.
JW
On 10/9/07, JW Feng [EMAIL PROTECTED] wrote:
GMX users,
In 3.3.1, I used trjconv -ur compact -pbc whole to convert a
rhombic dodecahedron box so it could be displayed properly in VMD.
This does not appear to be working in 3.3.2. Is there another way to
convert a box so it displays properly in a visualization program?
This is the command that I used,
echo 0 | trjconv -ur compact -pbc whole -f 1fsv_heat300.gro -s
1fsv_heat300.gro -o 1fsv_heat300_visual.gro
Thanks,
JW
--
Jianwen A Feng
Center for Computational Biology
Washington University in St. Louis
--
Jianwen A Feng
Center for Computational Biology
Washington University in St. Louis
___
gmx-users mailing listgmx-users@gromacs.org
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
