Re: [gmx-users] extrnal itp files
What do you mean by directions? in your topology file you have to include the file martini_v2.1.itp as you would do for any other force field! On Feb 16, 2009, at 11:07 AM, bhf70 wrote: It is possible to set an example ? bhf70 wrote: > Could you tell me, please. > > What's directions need the programm pdb2gmx to use external .itp files, > for example martini_v2.1.itp (Coarse Grained Force Field)? > > How is it to do ? There should be instructions accompanying that force field wherever you got it from. There's some general information here http://wiki.gromacs.org/index.php/Include_File_Mechanism Mark ___ gmx-users mailing listgmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php . ___ gmx-users mailing listgmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php ___ gmx-users mailing listgmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
Re: Re: [gmx-users] extrnal itp files
It is possible to set an example ? bhf70 wrote: > Could you tell me, please. > > What's directions need the programm pdb2gmx to use external .itp files, > for example martini_v2.1.itp (Coarse Grained Force Field)? > > How is it to do ? There should be instructions accompanying that force field wherever you got it from. There's some general information here http://wiki.gromacs.org/index.php/Include_File_Mechanism Mark ___ gmx-users mailing listgmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php . ___ gmx-users mailing listgmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
Re: [gmx-users] extrnal itp files
bhf70 wrote: Could you tell me, please. What's directions need the programm pdb2gmx to use external .itp files, for example martini_v2.1.itp (Coarse Grained Force Field)? How is it to do ? There should be instructions accompanying that force field wherever you got it from. There's some general information here http://wiki.gromacs.org/index.php/Include_File_Mechanism Mark ___ gmx-users mailing listgmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
