subject:"\[gmx\-users\] \"cmake\" failed to install"

Re: [gmx-users] "cmake" failed to install

2017-06-01 Thread ZHANG Cheng

Dear Mark and Mario,
Thank you very much. I delete the gromacs and redo the cmake and it works now.


Yours sincerely
Cheng




-- Original --
From:  "mario";<ma...@exactas.unlpam.edu.ar>;
Date:  Thu, Jun 1, 2017 04:07 PM
To:  "ZHANG Cheng"<272699...@qq.com>; 
Cc:  "mario"<ma...@exactas.unlpam.edu.ar>; "gmx-users"<gmx-us...@gromacs.org>; 
"gromacs.org_gmx-users"<gromacs.org_gmx-users@maillist.sys.kth.se>; 
Subject:  Re: Re:  [gmx-users] "cmake" failed to install



Seems to be an old problem. You should read this

https://mailman-1.sys.kth.se/pipermail/gromacs.org_gmx-users/2015-May/097312.html

> After following Mario's link, I still could not solve it. The same problem
> happens.
>
>
> My command line is:
>
>
> lee@ubuntu:~/Jef/gromacs/gromacs-5.1.4/build$ cmake ..
> -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
> -- The CXX compiler identification is GNU 4.8.4
> -- Check for working CXX compiler: /usr/bin/c++
> -- Check for working CXX compiler: /usr/bin/c++ -- works
> -- Detecting CXX compiler ABI info
> -- Detecting CXX compiler ABI info - done
> -- No compatible CUDA toolkit found (v4.0+), disabling native GPU
> acceleration
> -- Performing Test CXXFLAGS_PRAGMA
> -- Performing Test CXXFLAGS_PRAGMA - Success
> -- Performing Test CXXFLAGS_WARN
> -- Performing Test CXXFLAGS_WARN - Success
> -- Performing Test CXXFLAGS_WARN_EXTRA
> -- Performing Test CXXFLAGS_WARN_EXTRA - Success
> -- Performing Test CXXFLAGS_WARN_UNDEF
> -- Performing Test CXXFLAGS_WARN_UNDEF - Success
> -- Performing Test CXXFLAGS_WARN_REL
> -- Performing Test CXXFLAGS_WARN_REL - Success
> -- Performing Test CXXFLAGS_EXCESS_PREC
> -- Performing Test CXXFLAGS_EXCESS_PREC - Success
> -- Performing Test CXXFLAGS_COPT
> -- Performing Test CXXFLAGS_COPT - Success
> -- Performing Test CXXFLAGS_NOINLINE
> -- Performing Test CXXFLAGS_NOINLINE - Success
> CMake Warning at cmake/gmxTestCompilerProblems.cmake:44 (message):
>   The versions of the C and C++ compilers do not match (4.8.2 and 4.8.4,
>   respectively).  Mixing different C/C++ compilers can cause problems.
> Call Stack (most recent call first):
>   CMakeLists.txt:310 (gmx_test_compiler_problems)
>
>
>
>
> CMake Error at cmake/gmxManageSimd.cmake:67 (message):
>   Cannot find AVX compiler flag.  Use a newer compiler, or choose SSE4.1
> SIMD
>   (slower).
> Call Stack (most recent call first):
>   cmake/gmxManageSimd.cmake:261
> (gmx_give_fatal_error_when_simd_support_not_found)
>   CMakeLists.txt:648 (gmx_manage_simd)
>
>
>
>
> -- Configuring incomplete, errors occurred!
> See also
> "/home/lee/Jef/gromacs/gromacs-5.1.4/build/CMakeFiles/CMakeOutput.log".
> See also
> "/home/lee/Jef/gromacs/gromacs-5.1.4/build/CMakeFiles/CMakeError.log".
>
>
>
>
>
> ---------- Original --
> From:  "mario";<ma...@exactas.unlpam.edu.ar>;
> Date:  Thu, Jun 1, 2017 02:44 PM
> To:  "gmx-users"<gmx-us...@gromacs.org>;
> Cc:  "gromacs.org_gmx-users"<gromacs.org_gmx-users@maillist.sys.kth.se>;
> "ZHANG Cheng"<272699...@qq.com>;
> Subject:  Re: [gmx-users] "cmake" failed to install
>
>
>
> Dear Cheng:
> I solved that problem by following step by step instructions of the next
> page:
>
> https://bioinformaticsreview.com/20151126/how-to-install-gromacs-5-x-x-on-linux-ubuntu-14-04-lts/
>
> Best Regards
> Mario Campo
> Dpto Física - UNLPam
> La Pampa Argentina
>
>> Dear Gromacs,
>> I did the below on Ubuntu 14.04:
>>
>>
>> tar xfz gromacs-5.1.4.tar.gz
>> cd gromacs-5.1.4
>> mkdir build
>> cd build
>>
>>
>>
>> Then, I got error message when running:
>> cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
>>
>>
>> The error log files can be found here:
>> https://1drv.ms/f/s!AjIs-W_id1LzobZfGThismE4so_SRQ
>>
>>
>> Can I ask how to solve this?
>>
>>
>> Thank you.
>>
>>
>> Yours sincerely
>> Cheng
>> --
>> Gromacs Users mailing list
>>
>> * Please search the archive at
>> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
>> posting!
>>
>> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>>
>> * For (un)subscribe requests visit
>> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
>> send
>> a mail to gmx-users-requ...@gromacs.org.
>>
-- 
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* Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!

* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

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Re: [gmx-users] "cmake" failed to install

2017-06-01 Thread Mark Abraham

On Thu, Jun 1, 2017 at 2:39 PM  wrote:

> Dear Cheng:
> I solved that problem by following step by step instructions of the next
> page:
>
>
> https://bioinformaticsreview.com/20151126/how-to-install-gromacs-5-x-x-on-linux-ubuntu-14-04-lts/


That's a bit of a strange guide. It describes the process as tedious,
provides some useful tips about how to prepare that Ubuntu system, adds
some manual (possibly tedious) stages that deliberately circumvent existing
convenience automation, and then gives an unnecessarily complex call to
cmake that explicitly disable those convenience features that are off by
default.

Do follow the advice about using apt for this OS, but having prepared the
system, then follow the standard installation advice at
http://manual.gromacs.org/documentation/5.1.1/install-guide/index.html#quick-and-dirty-installation
and be happy :-)

Mark


>
> Best Regards
> Mario Campo
> Dpto Física - UNLPam
> La Pampa Argentina
>
> > Dear Gromacs,
> > I did the below on Ubuntu 14.04:
> >
> >
> > tar xfz gromacs-5.1.4.tar.gz
> > cd gromacs-5.1.4
> > mkdir build
> > cd build
> >
> >
> >
> > Then, I got error message when running:
> > cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
> >
> >
> > The error log files can be found here:
> > https://1drv.ms/f/s!AjIs-W_id1LzobZfGThismE4so_SRQ
> >
> >
> > Can I ask how to solve this?
> >
> >
> > Thank you.
> >
> >
> > Yours sincerely
> > Cheng
> > --
> > Gromacs Users mailing list
> >
> > * Please search the archive at
> > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> > posting!
> >
> > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> >
> > * For (un)subscribe requests visit
> > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send
> > a mail to gmx-users-requ...@gromacs.org.
> >
>
>
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-requ...@gromacs.org.
>
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Re: [gmx-users] "cmake" failed to install

2017-06-01 Thread mario

Seems to be an old problem. You should read this

https://mailman-1.sys.kth.se/pipermail/gromacs.org_gmx-users/2015-May/097312.html

> After following Mario's link, I still could not solve it. The same problem
> happens.
>
>
> My command line is:
>
>
> lee@ubuntu:~/Jef/gromacs/gromacs-5.1.4/build$ cmake ..
> -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
> -- The CXX compiler identification is GNU 4.8.4
> -- Check for working CXX compiler: /usr/bin/c++
> -- Check for working CXX compiler: /usr/bin/c++ -- works
> -- Detecting CXX compiler ABI info
> -- Detecting CXX compiler ABI info - done
> -- No compatible CUDA toolkit found (v4.0+), disabling native GPU
> acceleration
> -- Performing Test CXXFLAGS_PRAGMA
> -- Performing Test CXXFLAGS_PRAGMA - Success
> -- Performing Test CXXFLAGS_WARN
> -- Performing Test CXXFLAGS_WARN - Success
> -- Performing Test CXXFLAGS_WARN_EXTRA
> -- Performing Test CXXFLAGS_WARN_EXTRA - Success
> -- Performing Test CXXFLAGS_WARN_UNDEF
> -- Performing Test CXXFLAGS_WARN_UNDEF - Success
> -- Performing Test CXXFLAGS_WARN_REL
> -- Performing Test CXXFLAGS_WARN_REL - Success
> -- Performing Test CXXFLAGS_EXCESS_PREC
> -- Performing Test CXXFLAGS_EXCESS_PREC - Success
> -- Performing Test CXXFLAGS_COPT
> -- Performing Test CXXFLAGS_COPT - Success
> -- Performing Test CXXFLAGS_NOINLINE
> -- Performing Test CXXFLAGS_NOINLINE - Success
> CMake Warning at cmake/gmxTestCompilerProblems.cmake:44 (message):
>   The versions of the C and C++ compilers do not match (4.8.2 and 4.8.4,
>   respectively).  Mixing different C/C++ compilers can cause problems.
> Call Stack (most recent call first):
>   CMakeLists.txt:310 (gmx_test_compiler_problems)
>
>
>
>
> CMake Error at cmake/gmxManageSimd.cmake:67 (message):
>   Cannot find AVX compiler flag.  Use a newer compiler, or choose SSE4.1
> SIMD
>   (slower).
> Call Stack (most recent call first):
>   cmake/gmxManageSimd.cmake:261
> (gmx_give_fatal_error_when_simd_support_not_found)
>   CMakeLists.txt:648 (gmx_manage_simd)
>
>
>
>
> -- Configuring incomplete, errors occurred!
> See also
> "/home/lee/Jef/gromacs/gromacs-5.1.4/build/CMakeFiles/CMakeOutput.log".
> See also
> "/home/lee/Jef/gromacs/gromacs-5.1.4/build/CMakeFiles/CMakeError.log".
>
>
>
>
>
> -- Original --
> From:  "mario";<ma...@exactas.unlpam.edu.ar>;
> Date:  Thu, Jun 1, 2017 02:44 PM
> To:  "gmx-users"<gmx-us...@gromacs.org>;
> Cc:  "gromacs.org_gmx-users"<gromacs.org_gmx-users@maillist.sys.kth.se>;
> "ZHANG Cheng"<272699...@qq.com>;
> Subject:  Re: [gmx-users] "cmake" failed to install
>
>
>
> Dear Cheng:
> I solved that problem by following step by step instructions of the next
> page:
>
> https://bioinformaticsreview.com/20151126/how-to-install-gromacs-5-x-x-on-linux-ubuntu-14-04-lts/
>
> Best Regards
> Mario Campo
> Dpto Física - UNLPam
> La Pampa Argentina
>
>> Dear Gromacs,
>> I did the below on Ubuntu 14.04:
>>
>>
>> tar xfz gromacs-5.1.4.tar.gz
>> cd gromacs-5.1.4
>> mkdir build
>> cd build
>>
>>
>>
>> Then, I got error message when running:
>> cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
>>
>>
>> The error log files can be found here:
>> https://1drv.ms/f/s!AjIs-W_id1LzobZfGThismE4so_SRQ
>>
>>
>> Can I ask how to solve this?
>>
>>
>> Thank you.
>>
>>
>> Yours sincerely
>> Cheng
>> --
>> Gromacs Users mailing list
>>
>> * Please search the archive at
>> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
>> posting!
>>
>> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>>
>> * For (un)subscribe requests visit
>> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
>> send
>> a mail to gmx-users-requ...@gromacs.org.
>>


-- 
Gromacs Users mailing list

* Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!

* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

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Re: [gmx-users] "cmake" failed to install

2017-06-01 Thread Mark Abraham

Hi,

I don't think that cmake command can produce that result. Please remove
everything from the build directory and run that cmake command again.

I would also investigate why your compiler versions are mismatched. If you
are using the compilers provided by Ubuntu, then this is wildly unlikely to
happen. If you're using compilers you got somehow else, then I suggest you
stop doing that until you have things working with the standard compilers.

Mark

On Thu, Jun 1, 2017 at 3:21 PM ZHANG Cheng <272699...@qq.com> wrote:

> After following Mario's link, I still could not solve it. The same problem
> happens.
>
>
> My command line is:
>
>
> lee@ubuntu:~/Jef/gromacs/gromacs-5.1.4/build$ cmake ..
> -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
> -- The CXX compiler identification is GNU 4.8.4
> -- Check for working CXX compiler: /usr/bin/c++
> -- Check for working CXX compiler: /usr/bin/c++ -- works
> -- Detecting CXX compiler ABI info
> -- Detecting CXX compiler ABI info - done
> -- No compatible CUDA toolkit found (v4.0+), disabling native GPU
> acceleration
> -- Performing Test CXXFLAGS_PRAGMA
> -- Performing Test CXXFLAGS_PRAGMA - Success
> -- Performing Test CXXFLAGS_WARN
> -- Performing Test CXXFLAGS_WARN - Success
> -- Performing Test CXXFLAGS_WARN_EXTRA
> -- Performing Test CXXFLAGS_WARN_EXTRA - Success
> -- Performing Test CXXFLAGS_WARN_UNDEF
> -- Performing Test CXXFLAGS_WARN_UNDEF - Success
> -- Performing Test CXXFLAGS_WARN_REL
> -- Performing Test CXXFLAGS_WARN_REL - Success
> -- Performing Test CXXFLAGS_EXCESS_PREC
> -- Performing Test CXXFLAGS_EXCESS_PREC - Success
> -- Performing Test CXXFLAGS_COPT
> -- Performing Test CXXFLAGS_COPT - Success
> -- Performing Test CXXFLAGS_NOINLINE
> -- Performing Test CXXFLAGS_NOINLINE - Success
> CMake Warning at cmake/gmxTestCompilerProblems.cmake:44 (message):
>   The versions of the C and C++ compilers do not match (4.8.2 and 4.8.4,
>   respectively).  Mixing different C/C++ compilers can cause problems.
> Call Stack (most recent call first):
>   CMakeLists.txt:310 (gmx_test_compiler_problems)
>
>
>
>
> CMake Error at cmake/gmxManageSimd.cmake:67 (message):
>   Cannot find AVX compiler flag.  Use a newer compiler, or choose SSE4.1
> SIMD
>   (slower).
> Call Stack (most recent call first):
>   cmake/gmxManageSimd.cmake:261
> (gmx_give_fatal_error_when_simd_support_not_found)
>   CMakeLists.txt:648 (gmx_manage_simd)
>
>
>
>
> -- Configuring incomplete, errors occurred!
> See also
> "/home/lee/Jef/gromacs/gromacs-5.1.4/build/CMakeFiles/CMakeOutput.log".
> See also
> "/home/lee/Jef/gromacs/gromacs-5.1.4/build/CMakeFiles/CMakeError.log".
>
>
>
>
>
> -- Original --
> From:  "mario";<ma...@exactas.unlpam.edu.ar>;
> Date:  Thu, Jun 1, 2017 02:44 PM
> To:  "gmx-users"<gmx-us...@gromacs.org>;
> Cc:  "gromacs.org_gmx-users"<gromacs.org_gmx-users@maillist.sys.kth.se>;
> "ZHANG Cheng"<272699...@qq.com>;
> Subject:  Re: [gmx-users] "cmake" failed to install
>
>
>
> Dear Cheng:
> I solved that problem by following step by step instructions of the next
> page:
>
>
> https://bioinformaticsreview.com/20151126/how-to-install-gromacs-5-x-x-on-linux-ubuntu-14-04-lts/
>
> Best Regards
> Mario Campo
> Dpto Física - UNLPam
> La Pampa Argentina
>
> > Dear Gromacs,
> > I did the below on Ubuntu 14.04:
> >
> >
> > tar xfz gromacs-5.1.4.tar.gz
> > cd gromacs-5.1.4
> > mkdir build
> > cd build
> >
> >
> >
> > Then, I got error message when running:
> > cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
> >
> >
> > The error log files can be found here:
> > https://1drv.ms/f/s!AjIs-W_id1LzobZfGThismE4so_SRQ
> >
> >
> > Can I ask how to solve this?
> >
> >
> > Thank you.
> >
> >
> > Yours sincerely
> > Cheng
> > --
> > Gromacs Users mailing list
> >
> > * Please search the archive at
> > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> > posting!
> >
> > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> >
> > * For (un)subscribe requests visit
> > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send
> > a mail to gmx-users-requ...@gromacs.org.
> >
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-requ...@gromacs.org.
>
-- 
Gromacs Users mailing list

* Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!

* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a 
mail to gmx-users-requ...@gromacs.org.

Re: [gmx-users] "cmake" failed to install

2017-06-01 Thread ZHANG Cheng

After following Mario's link, I still could not solve it. The same problem 
happens.


My command line is:


lee@ubuntu:~/Jef/gromacs/gromacs-5.1.4/build$ cmake .. -DGMX_BUILD_OWN_FFTW=ON 
-DREGRESSIONTEST_DOWNLOAD=ON
-- The CXX compiler identification is GNU 4.8.4
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- No compatible CUDA toolkit found (v4.0+), disabling native GPU acceleration
-- Performing Test CXXFLAGS_PRAGMA
-- Performing Test CXXFLAGS_PRAGMA - Success
-- Performing Test CXXFLAGS_WARN
-- Performing Test CXXFLAGS_WARN - Success
-- Performing Test CXXFLAGS_WARN_EXTRA
-- Performing Test CXXFLAGS_WARN_EXTRA - Success
-- Performing Test CXXFLAGS_WARN_UNDEF
-- Performing Test CXXFLAGS_WARN_UNDEF - Success
-- Performing Test CXXFLAGS_WARN_REL
-- Performing Test CXXFLAGS_WARN_REL - Success
-- Performing Test CXXFLAGS_EXCESS_PREC
-- Performing Test CXXFLAGS_EXCESS_PREC - Success
-- Performing Test CXXFLAGS_COPT
-- Performing Test CXXFLAGS_COPT - Success
-- Performing Test CXXFLAGS_NOINLINE
-- Performing Test CXXFLAGS_NOINLINE - Success
CMake Warning at cmake/gmxTestCompilerProblems.cmake:44 (message):
  The versions of the C and C++ compilers do not match (4.8.2 and 4.8.4,
  respectively).  Mixing different C/C++ compilers can cause problems.
Call Stack (most recent call first):
  CMakeLists.txt:310 (gmx_test_compiler_problems)




CMake Error at cmake/gmxManageSimd.cmake:67 (message):
  Cannot find AVX compiler flag.  Use a newer compiler, or choose SSE4.1 SIMD
  (slower).
Call Stack (most recent call first):
  cmake/gmxManageSimd.cmake:261 
(gmx_give_fatal_error_when_simd_support_not_found)
  CMakeLists.txt:648 (gmx_manage_simd)




-- Configuring incomplete, errors occurred!
See also "/home/lee/Jef/gromacs/gromacs-5.1.4/build/CMakeFiles/CMakeOutput.log".
See also "/home/lee/Jef/gromacs/gromacs-5.1.4/build/CMakeFiles/CMakeError.log".





-- Original --
From:  "mario";<ma...@exactas.unlpam.edu.ar>;
Date:  Thu, Jun 1, 2017 02:44 PM
To:  "gmx-users"<gmx-us...@gromacs.org>; 
Cc:  "gromacs.org_gmx-users"<gromacs.org_gmx-users@maillist.sys.kth.se>; "ZHANG 
Cheng"<272699...@qq.com>; 
Subject:  Re: [gmx-users] "cmake" failed to install



Dear Cheng:
I solved that problem by following step by step instructions of the next
page:

https://bioinformaticsreview.com/20151126/how-to-install-gromacs-5-x-x-on-linux-ubuntu-14-04-lts/

Best Regards
Mario Campo
Dpto Física - UNLPam
La Pampa Argentina

> Dear Gromacs,
> I did the below on Ubuntu 14.04:
>
>
> tar xfz gromacs-5.1.4.tar.gz
> cd gromacs-5.1.4
> mkdir build
> cd build
>
>
>
> Then, I got error message when running:
> cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
>
>
> The error log files can be found here:
> https://1drv.ms/f/s!AjIs-W_id1LzobZfGThismE4so_SRQ
>
>
> Can I ask how to solve this?
>
>
> Thank you.
>
>
> Yours sincerely
> Cheng
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send
> a mail to gmx-users-requ...@gromacs.org.
>
-- 
Gromacs Users mailing list

* Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!

* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a 
mail to gmx-users-requ...@gromacs.org.

Re: [gmx-users] "cmake" failed to install

2017-06-01 Thread Mark Abraham

Hi,

We can't see the error message you got on the terminal, so we don't know
what the problem is.

Mark

On Thu, Jun 1, 2017 at 12:50 PM ZHANG Cheng <272699...@qq.com> wrote:

> Dear Gromacs,
> I did the below on Ubuntu 14.04:
>
>
> tar xfz gromacs-5.1.4.tar.gz
> cd gromacs-5.1.4
> mkdir build
> cd build
>
>
>
> Then, I got error message when running:
> cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
>
>
> The error log files can be found here:
> https://1drv.ms/f/s!AjIs-W_id1LzobZfGThismE4so_SRQ
>
>
> Can I ask how to solve this?
>
>
> Thank you.
>
>
> Yours sincerely
> Cheng
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
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>
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Re: [gmx-users] "cmake" failed to install

2017-06-01 Thread mario

Dear Cheng:
I solved that problem by following step by step instructions of the next
page:

https://bioinformaticsreview.com/20151126/how-to-install-gromacs-5-x-x-on-linux-ubuntu-14-04-lts/

Best Regards
Mario Campo
Dpto Física - UNLPam
La Pampa Argentina

> Dear Gromacs,
> I did the below on Ubuntu 14.04:
>
>
> tar xfz gromacs-5.1.4.tar.gz
> cd gromacs-5.1.4
> mkdir build
> cd build
>
>
>
> Then, I got error message when running:
> cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
>
>
> The error log files can be found here:
> https://1drv.ms/f/s!AjIs-W_id1LzobZfGThismE4so_SRQ
>
>
> Can I ask how to solve this?
>
>
> Thank you.
>
>
> Yours sincerely
> Cheng
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send
> a mail to gmx-users-requ...@gromacs.org.
>


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[gmx-users] "cmake" failed to install

2017-06-01 Thread ZHANG Cheng

Dear Gromacs,
I did the below on Ubuntu 14.04:


tar xfz gromacs-5.1.4.tar.gz
cd gromacs-5.1.4
mkdir build
cd build



Then, I got error message when running:
cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON


The error log files can be found here:
https://1drv.ms/f/s!AjIs-W_id1LzobZfGThismE4so_SRQ


Can I ask how to solve this?


Thank you.


Yours sincerely
Cheng
-- 
Gromacs Users mailing list

* Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!

* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a 
mail to gmx-users-requ...@gromacs.org.

Re: [gmx-users] "cmake" failed to install

Re: [gmx-users] "cmake" failed to install

Re: [gmx-users] "cmake" failed to install

Re: [gmx-users] "cmake" failed to install

Re: [gmx-users] "cmake" failed to install

Re: [gmx-users] "cmake" failed to install

Re: [gmx-users] "cmake" failed to install

[gmx-users] "cmake" failed to install

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