[jira] [Commented] (HBASE-11234) FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong result

2014-05-25 Thread Anoop Sam John (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11234?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008289#comment-14008289
 ] 

Anoop Sam John commented on HBASE-11234:


prefix-tree part of fix is required in Trunk also.
For 94 and 96 patches no changes are needed. 94 is reverted I think. (Which we 
can commit again)

I am fine with attached fix. Would like to get Matt Corgan's opinion also.

 FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong result
 

 Key: HBASE-11234
 URL: https://issues.apache.org/jira/browse/HBASE-11234
 Project: HBase
  Issue Type: Bug
Reporter: chunhui shen
Assignee: chunhui shen
Priority: Critical
 Fix For: 0.99.0, 0.96.3, 0.94.21, 0.98.4

 Attachments: 11234-94.patch, 11234-96.patch, 
 11234-98-with-prefix-tree.txt, HBASE-11234.patch


 As Ted found, 
 With this change:
 {noformat}
 Index: 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
 ===
 --- 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
(revision 1596579)
 +++ 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
(working copy)
 @@ -51,6 +51,7 @@
  import org.apache.hadoop.hbase.filter.FilterList.Operator;
  import org.apache.hadoop.hbase.filter.PageFilter;
  import org.apache.hadoop.hbase.filter.SingleColumnValueFilter;
 +import org.apache.hadoop.hbase.io.encoding.DataBlockEncoding;
  import org.apache.hadoop.hbase.io.hfile.CacheConfig;
  import org.apache.hadoop.hbase.io.hfile.HFileContext;
  import org.apache.hadoop.hbase.io.hfile.HFileContextBuilder;
 @@ -90,6 +91,7 @@
  CacheConfig cacheConf = new CacheConfig(TEST_UTIL.getConfiguration());
  HFileContextBuilder hcBuilder = new HFileContextBuilder();
  hcBuilder.withBlockSize(2 * 1024);
 +hcBuilder.withDataBlockEncoding(DataBlockEncoding.FAST_DIFF);
  HFileContext hFileContext = hcBuilder.build();
  StoreFile.Writer writer = new StoreFile.WriterBuilder(
  TEST_UTIL.getConfiguration(), cacheConf, fs).withOutputDir(
 {noformat}
 I got:
 java.lang.AssertionError: 
 expected:testRow0197/testCf:testQual/1400712260004/Put/vlen=13/mvcc=5 
 but was:testRow0198/testCf:testQual/1400712260004/   Put/vlen=13/mvcc=0
   at org.junit.Assert.fail(Assert.java:88)
   at org.junit.Assert.failNotEquals(Assert.java:743)
   at org.junit.Assert.assertEquals(Assert.java:118)
   at org.junit.Assert.assertEquals(Assert.java:144)
   at 
 org.apache.hadoop.hbase.regionserver.TestReversibleScanners.seekTestOfReversibleKeyValueScanner(TestReversibleScanners.java:533)
   at 
 org.apache.hadoop.hbase.regionserver.TestReversibleScanners.testReversibleStoreFileScanner(TestReversibleScanners.java:108)
 After debugging, it seems the method of 
 FastDiffDeltaEncoder#getFirstKeyInBlock become broken. And it will cause 
 hfilescanner#seekBefore returns wrong result.
 The solution is simple, see the patch.



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[jira] [Resolved] (HBASE-11246) Backport HBASE-11234 'FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong result'

2014-05-25 Thread Anoop Sam John (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11246?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Anoop Sam John resolved HBASE-11246.


Resolution: Invalid

HBASE-11234 is in reopened state now. No need for this Jira. So closing

 Backport HBASE-11234 'FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong 
 result'
 ---

 Key: HBASE-11246
 URL: https://issues.apache.org/jira/browse/HBASE-11246
 Project: HBase
  Issue Type: Bug
Reporter: Ted Yu
Priority: Critical
 Fix For: 0.98.4


 HBASE-11234 fixed bug in FastDiffDeltaEncoder.
 This issue is to backport the fix to earlier releases.
 For 0.96 / 0.98, the fix should also cover prefix tree encoding. This would 
 allow TestReversibleScanners#testReversibleStoreFileScanner to iterate 
 through all the data block encodings.



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[jira] [Reopened] (HBASE-11246) Backport HBASE-11234 'FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong result'

2014-05-25 Thread Ted Yu (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11246?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Ted Yu reopened HBASE-11246:



 Backport HBASE-11234 'FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong 
 result'
 ---

 Key: HBASE-11246
 URL: https://issues.apache.org/jira/browse/HBASE-11246
 Project: HBase
  Issue Type: Bug
Reporter: Ted Yu
Priority: Critical
 Fix For: 0.98.4


 HBASE-11234 fixed bug in FastDiffDeltaEncoder.
 This issue is to backport the fix to earlier releases.
 For 0.96 / 0.98, the fix should also cover prefix tree encoding. This would 
 allow TestReversibleScanners#testReversibleStoreFileScanner to iterate 
 through all the data block encodings.



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[jira] [Resolved] (HBASE-11246) Backport HBASE-11234 'FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong result'

2014-05-25 Thread Ted Yu (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11246?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Ted Yu resolved HBASE-11246.


Resolution: Duplicate

 Backport HBASE-11234 'FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong 
 result'
 ---

 Key: HBASE-11246
 URL: https://issues.apache.org/jira/browse/HBASE-11246
 Project: HBase
  Issue Type: Bug
Reporter: Ted Yu
Priority: Critical
 Fix For: 0.98.4


 HBASE-11234 fixed bug in FastDiffDeltaEncoder.
 This issue is to backport the fix to earlier releases.
 For 0.96 / 0.98, the fix should also cover prefix tree encoding. This would 
 allow TestReversibleScanners#testReversibleStoreFileScanner to iterate 
 through all the data block encodings.



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Does anyone know how to read hbase hdfs file using java api?

2014-05-25 Thread David Liu
Hi experts,

I create a table using this command: create 'test','cf1'.
then put some data there: put 'test','realRow','cf1','realvalue1'
now I am trying to read its data using hdfs java api instead of hbase api:

FileSystem fs = FileSystem.get(URI.create(uri), conf);

 Path path = new Path(


hdfs://localhost:9000/apps/hbase/data/data/default/test/69c16a187661b1ea8dd904851b9e3bb0/cf1/111c243d1953442f93b4d653690abe20
);

 FSDataInputStream in = fs.open(path);

 String filename = 111c243d1953442f93b4d653690abe20;

 BufferedOutputStream out = new BufferedOutputStream(

  new FileOutputStream(new File(filename)));

 byte[] b = new byte[1024];

 int numBytes = 0;

 while ((numBytes = in.read(b))  0) {

 out.write(b, 0, numBytes);

 System.out.println(Bytes.toString(b));

 }

But data come like this:

[image: Inline image 1]

Is there something wrong with my decoding code?


Thanks


[jira] [Commented] (HBASE-11096) stop method of Master and RegionServer coprocessor is not invoked

2014-05-25 Thread Qiang Tian (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11096?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008311#comment-14008311
 ] 

Qiang Tian commented on HBASE-11096:


Hi [~apurtell],
it looks the shutdown method is not called..could you please check if the patch 
apply to the MasterCoprocessorHost.java correctly? I just run command patch 
-p0 ../backup/HBASE-11096-trunk-v3.patch to trunk, and the change is not 
applied correctly. 

ps when I firstly saw your update on 20/5, I merged the code with latest code 
using git merge command and the test running fine. 
today I used git rebase command to merge my local branch with the latest code 
(since you recommended rebase in mailing list), and I got the error ---after 
investigation the MasterCoprocessorHost.java was not merged correctly..  

I did a search, it looks git rebase uses patch command to do the final merge. 
so if patch does not work correctly, the rebase will fail too...

pps..this is my second time to see patch command fails...Did I use wrong option?




 stop method of Master and RegionServer coprocessor  is not invoked
 --

 Key: HBASE-11096
 URL: https://issues.apache.org/jira/browse/HBASE-11096
 Project: HBase
  Issue Type: Bug
Affects Versions: 0.96.2, 0.98.1, 0.94.19
Reporter: Qiang Tian
Assignee: Qiang Tian
 Fix For: 0.99.0, 0.96.3, 0.94.21, 0.98.4

 Attachments: HBASE-11096-0.94.patch, HBASE-11096-0.96.patch, 
 HBASE-11096-0.98.patch, HBASE-11096-trunk-v0.patch, 
 HBASE-11096-trunk-v0.patch, HBASE-11096-trunk-v1.patch, 
 HBASE-11096-trunk-v2.patch, HBASE-11096-trunk-v3.patch, 
 HBASE-11096-trunk-v3.patch, TestCoprocessorStop-failed-output.txt


 the stop method of coprocessor specified by 
 hbase.coprocessor.master.classes and  
 hbase.coprocessor.regionserver.classes  is not invoked.
 If coprocessor allocates OS resources, it could cause master/regionserver 
 resource leak or hang during exit.



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Re: Does anyone know how to read hbase hdfs file using java api?

2014-05-25 Thread Stack
On Sat, May 24, 2014 at 11:23 PM, David Liu d...@gopivotal.com wrote:

 Hi experts,

 I create a table using this command: create 'test','cf1'.
 then put some data there: put 'test','realRow','cf1','realvalue1'
 now I am trying to read its data using hdfs java api instead of hbase api:

 FileSystem fs = FileSystem.get(URI.create(uri), conf);

  Path path = new Path(


 hdfs://localhost:9000/apps/hbase/data/data/default/test/69c16a187661b1ea8dd904851b9e3bb0/cf1/111c243d1953442f93b4d653690abe20
 );

  FSDataInputStream in = fs.open(path);

  String filename = 111c243d1953442f93b4d653690abe20;

  BufferedOutputStream out = new BufferedOutputStream(

   new FileOutputStream(new File(filename)));

  byte[] b = new byte[1024];

  int numBytes = 0;

  while ((numBytes = in.read(b))  0) {

  out.write(b, 0, numBytes);

  System.out.println(Bytes.toString(b));

  }

 But data come like this:

 [image: Inline image 1]

 Is there something wrong with my decoding code?


 Your image did not come across (they are suppressed on this mailing list).
 Better to put up a link in future.

You just want to read raw bytes or you want interpreted view on the
contents?

HBase writes hfiles: see http://hbase.apache.org/book.html#hfilev2

For an example reading them, start at the main method here
http://hbase.apache.org/xref/org/apache/hadoop/hbase/io/hfile/HFile.html#891and
follow through to the pretty print class.

St.Ack


[jira] [Created] (HBASE-11249) Missing null check in finally block of HRegion#processRowsWithLocks()

2014-05-25 Thread Ted Yu (JIRA)
Ted Yu created HBASE-11249:
--

 Summary: Missing null check in finally block of 
HRegion#processRowsWithLocks()
 Key: HBASE-11249
 URL: https://issues.apache.org/jira/browse/HBASE-11249
 Project: HBase
  Issue Type: Bug
Reporter: Ted Yu
Priority: Minor


At line 4883:
{code}
Store store = getStore(kv);
if (store == null) {
  checkFamily(CellUtil.cloneFamily(kv));
  // unreachable
}
{code}




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[jira] [Updated] (HBASE-11249) Missing null check in finally block of HRegion#processRowsWithLocks()

2014-05-25 Thread Ted Yu (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11249?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Ted Yu updated HBASE-11249:
---

Description: 
At line 4883:
{code}
Store store = getStore(kv);
if (store == null) {
  checkFamily(CellUtil.cloneFamily(kv));
  // unreachable
}
{code}
Exception would be thrown from checkFamily() if store is null.
In the finally block:
{code}
  } finally {
if (!mutations.isEmpty()  !walSyncSuccessful) {
  LOG.warn(Wal sync failed. Roll back  + mutations.size() +
   memstore keyvalues for row(s): + StringUtils.byteToHexString(
  processor.getRowsToLock().iterator().next()) + ...);
  for (KeyValue kv : mutations) {
getStore(kv).rollback(kv);
  }
{code}
There is no corresponding null check for store above, potentially leading to 
partially rolled back state in memstore.

  was:
At line 4883:
{code}
Store store = getStore(kv);
if (store == null) {
  checkFamily(CellUtil.cloneFamily(kv));
  // unreachable
}
{code}



 Missing null check in finally block of HRegion#processRowsWithLocks()
 -

 Key: HBASE-11249
 URL: https://issues.apache.org/jira/browse/HBASE-11249
 Project: HBase
  Issue Type: Bug
Reporter: Ted Yu
Priority: Minor

 At line 4883:
 {code}
 Store store = getStore(kv);
 if (store == null) {
   checkFamily(CellUtil.cloneFamily(kv));
   // unreachable
 }
 {code}
 Exception would be thrown from checkFamily() if store is null.
 In the finally block:
 {code}
   } finally {
 if (!mutations.isEmpty()  !walSyncSuccessful) {
   LOG.warn(Wal sync failed. Roll back  + mutations.size() +
memstore keyvalues for row(s): + StringUtils.byteToHexString(
   processor.getRowsToLock().iterator().next()) + ...);
   for (KeyValue kv : mutations) {
 getStore(kv).rollback(kv);
   }
 {code}
 There is no corresponding null check for store above, potentially leading to 
 partially rolled back state in memstore.



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[jira] [Updated] (HBASE-11249) Missing null check in finally block of HRegion#processRowsWithLocks()

2014-05-25 Thread Ted Yu (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11249?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Ted Yu updated HBASE-11249:
---

Description: 
At line 4883:
{code}
Store store = getStore(kv);
if (store == null) {
  checkFamily(CellUtil.cloneFamily(kv));
  // unreachable
}
{code}
Exception would be thrown from checkFamily() if store is null.
In the finally block:
{code}
  } finally {
if (!mutations.isEmpty()  !walSyncSuccessful) {
  LOG.warn(Wal sync failed. Roll back  + mutations.size() +
   memstore keyvalues for row(s): + StringUtils.byteToHexString(
  processor.getRowsToLock().iterator().next()) + ...);
  for (KeyValue kv : mutations) {
getStore(kv).rollback(kv);
  }
{code}
There is no corresponding null check for return value of getStore() above, 
potentially leading to partially rolled back state in memstore.

  was:
At line 4883:
{code}
Store store = getStore(kv);
if (store == null) {
  checkFamily(CellUtil.cloneFamily(kv));
  // unreachable
}
{code}
Exception would be thrown from checkFamily() if store is null.
In the finally block:
{code}
  } finally {
if (!mutations.isEmpty()  !walSyncSuccessful) {
  LOG.warn(Wal sync failed. Roll back  + mutations.size() +
   memstore keyvalues for row(s): + StringUtils.byteToHexString(
  processor.getRowsToLock().iterator().next()) + ...);
  for (KeyValue kv : mutations) {
getStore(kv).rollback(kv);
  }
{code}
There is no corresponding null check for store above, potentially leading to 
partially rolled back state in memstore.


 Missing null check in finally block of HRegion#processRowsWithLocks()
 -

 Key: HBASE-11249
 URL: https://issues.apache.org/jira/browse/HBASE-11249
 Project: HBase
  Issue Type: Bug
Reporter: Ted Yu
Priority: Minor

 At line 4883:
 {code}
 Store store = getStore(kv);
 if (store == null) {
   checkFamily(CellUtil.cloneFamily(kv));
   // unreachable
 }
 {code}
 Exception would be thrown from checkFamily() if store is null.
 In the finally block:
 {code}
   } finally {
 if (!mutations.isEmpty()  !walSyncSuccessful) {
   LOG.warn(Wal sync failed. Roll back  + mutations.size() +
memstore keyvalues for row(s): + StringUtils.byteToHexString(
   processor.getRowsToLock().iterator().next()) + ...);
   for (KeyValue kv : mutations) {
 getStore(kv).rollback(kv);
   }
 {code}
 There is no corresponding null check for return value of getStore() above, 
 potentially leading to partially rolled back state in memstore.



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[jira] [Updated] (HBASE-11249) Missing null check in finally block of HRegion#processRowsWithLocks() may lead to partially rolled back state in memstore.

2014-05-25 Thread Ted Yu (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11249?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Ted Yu updated HBASE-11249:
---

Summary: Missing null check in finally block of 
HRegion#processRowsWithLocks() may lead to partially rolled back state in 
memstore.  (was: Missing null check in finally block of 
HRegion#processRowsWithLocks())

 Missing null check in finally block of HRegion#processRowsWithLocks() may 
 lead to partially rolled back state in memstore.
 --

 Key: HBASE-11249
 URL: https://issues.apache.org/jira/browse/HBASE-11249
 Project: HBase
  Issue Type: Bug
Reporter: Ted Yu
Priority: Minor

 At line 4883:
 {code}
 Store store = getStore(kv);
 if (store == null) {
   checkFamily(CellUtil.cloneFamily(kv));
   // unreachable
 }
 {code}
 Exception would be thrown from checkFamily() if store is null.
 In the finally block:
 {code}
   } finally {
 if (!mutations.isEmpty()  !walSyncSuccessful) {
   LOG.warn(Wal sync failed. Roll back  + mutations.size() +
memstore keyvalues for row(s): + StringUtils.byteToHexString(
   processor.getRowsToLock().iterator().next()) + ...);
   for (KeyValue kv : mutations) {
 getStore(kv).rollback(kv);
   }
 {code}
 There is no corresponding null check for return value of getStore() above, 
 potentially leading to partially rolled back state in memstore.



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[jira] [Updated] (HBASE-11234) FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong result

2014-05-25 Thread Ted Yu (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11234?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Ted Yu updated HBASE-11234:
---

Attachment: 11234-trunk.addendum

Addendum for trunk which touches PrefixTreeArrayScanner.java

 FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong result
 

 Key: HBASE-11234
 URL: https://issues.apache.org/jira/browse/HBASE-11234
 Project: HBase
  Issue Type: Bug
Reporter: chunhui shen
Assignee: chunhui shen
Priority: Critical
 Fix For: 0.99.0, 0.96.3, 0.94.21, 0.98.4

 Attachments: 11234-94.patch, 11234-96.patch, 
 11234-98-with-prefix-tree.txt, 11234-trunk.addendum, HBASE-11234.patch


 As Ted found, 
 With this change:
 {noformat}
 Index: 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
 ===
 --- 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
(revision 1596579)
 +++ 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
(working copy)
 @@ -51,6 +51,7 @@
  import org.apache.hadoop.hbase.filter.FilterList.Operator;
  import org.apache.hadoop.hbase.filter.PageFilter;
  import org.apache.hadoop.hbase.filter.SingleColumnValueFilter;
 +import org.apache.hadoop.hbase.io.encoding.DataBlockEncoding;
  import org.apache.hadoop.hbase.io.hfile.CacheConfig;
  import org.apache.hadoop.hbase.io.hfile.HFileContext;
  import org.apache.hadoop.hbase.io.hfile.HFileContextBuilder;
 @@ -90,6 +91,7 @@
  CacheConfig cacheConf = new CacheConfig(TEST_UTIL.getConfiguration());
  HFileContextBuilder hcBuilder = new HFileContextBuilder();
  hcBuilder.withBlockSize(2 * 1024);
 +hcBuilder.withDataBlockEncoding(DataBlockEncoding.FAST_DIFF);
  HFileContext hFileContext = hcBuilder.build();
  StoreFile.Writer writer = new StoreFile.WriterBuilder(
  TEST_UTIL.getConfiguration(), cacheConf, fs).withOutputDir(
 {noformat}
 I got:
 java.lang.AssertionError: 
 expected:testRow0197/testCf:testQual/1400712260004/Put/vlen=13/mvcc=5 
 but was:testRow0198/testCf:testQual/1400712260004/   Put/vlen=13/mvcc=0
   at org.junit.Assert.fail(Assert.java:88)
   at org.junit.Assert.failNotEquals(Assert.java:743)
   at org.junit.Assert.assertEquals(Assert.java:118)
   at org.junit.Assert.assertEquals(Assert.java:144)
   at 
 org.apache.hadoop.hbase.regionserver.TestReversibleScanners.seekTestOfReversibleKeyValueScanner(TestReversibleScanners.java:533)
   at 
 org.apache.hadoop.hbase.regionserver.TestReversibleScanners.testReversibleStoreFileScanner(TestReversibleScanners.java:108)
 After debugging, it seems the method of 
 FastDiffDeltaEncoder#getFirstKeyInBlock become broken. And it will cause 
 hfilescanner#seekBefore returns wrong result.
 The solution is simple, see the patch.



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[jira] [Commented] (HBASE-11161) Provide example of POJO encoding with protobuf

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11161?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008447#comment-14008447
 ] 

Hudson commented on HBASE-11161:


SUCCESS: Integrated in HBase-0.98 #314 (See 
[https://builds.apache.org/job/HBase-0.98/314/])
HBASE-11161 Provide example of POJO encoding with protobuf (Nick Dimiduk) 
(apurtell: rev d73711c800415250e5543cf22db486074c8ce815)
* hbase-examples/src/main/java/org/apache/hadoop/hbase/types/PBCell.java
* hbase-common/src/main/java/org/apache/hadoop/hbase/types/PBType.java
* hbase-examples/src/test/java/org/apache/hadoop/hbase/types/TestPBCell.java
Amend HBASE-11161 Provide example of POJO encoding with protobuf; Add explicit 
dependency on protobuf-java to hbase-common for Hadoop 1 (apurtell: rev 
503709fdf67d335fcb96f9a60a4b971de01479e1)
* hbase-common/pom.xml


 Provide example of POJO encoding with protobuf
 --

 Key: HBASE-11161
 URL: https://issues.apache.org/jira/browse/HBASE-11161
 Project: HBase
  Issue Type: Sub-task
  Components: Client
Reporter: Nick Dimiduk
Assignee: Nick Dimiduk
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11161-addendum.patch, HBASE-11161.01-0.98.patch, 
 HBASE-11161.01.patch, pbtype_example.patch


 It would be nice to see how to use the DataType API with some out-of-the-box 
 data serialization tools. This ticket is to provide such an example using 
 Protobuf, since we already ship that dependency.



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[jira] [Commented] (HBASE-11137) Add mapred.TableSnapshotInputFormat

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11137?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008443#comment-14008443
 ] 

Hudson commented on HBASE-11137:


SUCCESS: Integrated in HBase-0.98 #314 (See 
[https://builds.apache.org/job/HBase-0.98/314/])
Amend HBASE-11137 Add mapred.TableSnapshotInputFormat; add missing license 
headers on branch 0.98 (apurtell: rev 568bfe416c1c880c84dbb4a11cdbe61aea9717a2)
* 
hbase-server/src/main/java/org/apache/hadoop/hbase/mapreduce/TableSnapshotInputFormatImpl.java
* 
hbase-server/src/main/java/org/apache/hadoop/hbase/mapred/TableSnapshotInputFormat.java


 Add mapred.TableSnapshotInputFormat
 ---

 Key: HBASE-11137
 URL: https://issues.apache.org/jira/browse/HBASE-11137
 Project: HBase
  Issue Type: Improvement
  Components: mapreduce, Performance
Affects Versions: 0.98.0, 0.96.2
Reporter: Nick Dimiduk
Assignee: Nick Dimiduk
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11137.00-0.98.patch, HBASE-11137.00.patch, 
 HBASE-11137.01.patch, HBASE-11137.01_rerun.patch, HBASE-11137.02-0.98.patch, 
 HBASE-11137.02.patch


 We should have feature parity between mapreduce and mapred implementations. 
 This is important for Hive.



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[jira] [Commented] (HBASE-11227) Mention 8- and 16-bit fixed-with encodings in OrderedBytes docstring

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11227?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008445#comment-14008445
 ] 

Hudson commented on HBASE-11227:


SUCCESS: Integrated in HBase-0.98 #314 (See 
[https://builds.apache.org/job/HBase-0.98/314/])
HBASE-11227 Mention 8- and 16-bit fixed-with encodings in OrderedBytes 
docstring (Nick Dimiduk) (apurtell: rev 
2aed26ae6f9f3b7e961d0d92aebad41ecd2b200c)
* hbase-common/src/main/java/org/apache/hadoop/hbase/util/OrderedBytes.java


 Mention 8- and 16-bit fixed-with encodings in OrderedBytes docstring
 

 Key: HBASE-11227
 URL: https://issues.apache.org/jira/browse/HBASE-11227
 Project: HBase
  Issue Type: Task
  Components: documentation
Affects Versions: 0.95.2
Reporter: Nick Dimiduk
Assignee: Nick Dimiduk
Priority: Trivial
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11227.00.patch


 Per title.



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[jira] [Commented] (HBASE-11149) Wire encryption is broken

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11149?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008444#comment-14008444
 ] 

Hudson commented on HBASE-11149:


SUCCESS: Integrated in HBase-0.98 #314 (See 
[https://builds.apache.org/job/HBase-0.98/314/])
HBASE-11149. Addendum for fixing unit test (apurtell: rev 
52dd30727a35b1b56ef2c474065ae206811d4a09)
* 
hbase-server/src/test/java/org/apache/hadoop/hbase/security/TestHBaseSaslRpcClient.java


 Wire encryption is broken
 -

 Key: HBASE-11149
 URL: https://issues.apache.org/jira/browse/HBASE-11149
 Project: HBase
  Issue Type: Bug
  Components: IPC/RPC
Reporter: Devaraj Das
Assignee: Devaraj Das
 Fix For: 0.99.0, 0.96.3, 0.98.3

 Attachments: 11149-1.txt, 11149-2-addendum.txt, 11149-2.txt


 Upon some testing with the QOP configuration (hbase.rpc.protection), 
 discovered that RPC doesn't work with integrity and privacy values for 
 the configuration key. I was using 0.98.x for testing but I believe the issue 
 is there in trunk as well (haven't checked 0.96 and 0.94).



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[jira] [Commented] (HBASE-9857) Blockcache prefetch option

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9857?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008442#comment-14008442
 ] 

Hudson commented on HBASE-9857:
---

SUCCESS: Integrated in HBase-0.98 #314 (See 
[https://builds.apache.org/job/HBase-0.98/314/])
Amend HBASE-9857 Blockcache prefetch option; add missing license header to 
correct file this time (apurtell: rev a260c862a71c6433213e6619c4de004250468c83)
* 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/PrefetchExecutor.java
* 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java


 Blockcache prefetch option
 --

 Key: HBASE-9857
 URL: https://issues.apache.org/jira/browse/HBASE-9857
 Project: HBase
  Issue Type: Improvement
Reporter: Andrew Purtell
Assignee: Andrew Purtell
Priority: Minor
 Fix For: 0.99.0, 0.98.3

 Attachments: 9857.patch, 9857.patch, HBASE-9857-0.98.patch, 
 HBASE-9857-trunk.patch, HBASE-9857-trunk.patch


 Attached patch implements a prefetching function for HFile (v3) blocks, if 
 indicated by a column family or regionserver property. The purpose of this 
 change is to as rapidly after region open as reasonable warm the blockcache 
 with all the data and index blocks of (presumably also in-memory) table data, 
 without counting those block loads as cache misses. Great for fast reads and 
 keeping the cache hit ratio high. Can tune the IO impact versus time until 
 all data blocks are in cache. Works a bit like CompactSplitThread. Makes some 
 effort not to stampede.
 I have been using this for setting up various experiments and thought I'd 
 polish it up a bit and throw it out there. If the data to be preloaded will 
 not fit in blockcache, or if as a percentage of blockcache it is large, this 
 is not a good idea, will just blow out the cache and trigger a lot of useless 
 GC activity. Might be useful as an expert tuning option though. Or not.



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[jira] [Commented] (HBASE-11234) FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong result

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11234?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008446#comment-14008446
 ] 

Hudson commented on HBASE-11234:


SUCCESS: Integrated in HBase-0.98 #314 (See 
[https://builds.apache.org/job/HBase-0.98/314/])
Revert HBASE-11234 FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong 
result (apurtell: rev b985e4fd0ebdd920b5c3b33dd5549713d82fa16a)
* 
hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
* 
hbase-common/src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java
* 
hbase-common/src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java


 FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong result
 

 Key: HBASE-11234
 URL: https://issues.apache.org/jira/browse/HBASE-11234
 Project: HBase
  Issue Type: Bug
Reporter: chunhui shen
Assignee: chunhui shen
Priority: Critical
 Fix For: 0.99.0, 0.96.3, 0.94.21, 0.98.4

 Attachments: 11234-94.patch, 11234-96.patch, 
 11234-98-with-prefix-tree.txt, 11234-trunk.addendum, HBASE-11234.patch


 As Ted found, 
 With this change:
 {noformat}
 Index: 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
 ===
 --- 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
(revision 1596579)
 +++ 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
(working copy)
 @@ -51,6 +51,7 @@
  import org.apache.hadoop.hbase.filter.FilterList.Operator;
  import org.apache.hadoop.hbase.filter.PageFilter;
  import org.apache.hadoop.hbase.filter.SingleColumnValueFilter;
 +import org.apache.hadoop.hbase.io.encoding.DataBlockEncoding;
  import org.apache.hadoop.hbase.io.hfile.CacheConfig;
  import org.apache.hadoop.hbase.io.hfile.HFileContext;
  import org.apache.hadoop.hbase.io.hfile.HFileContextBuilder;
 @@ -90,6 +91,7 @@
  CacheConfig cacheConf = new CacheConfig(TEST_UTIL.getConfiguration());
  HFileContextBuilder hcBuilder = new HFileContextBuilder();
  hcBuilder.withBlockSize(2 * 1024);
 +hcBuilder.withDataBlockEncoding(DataBlockEncoding.FAST_DIFF);
  HFileContext hFileContext = hcBuilder.build();
  StoreFile.Writer writer = new StoreFile.WriterBuilder(
  TEST_UTIL.getConfiguration(), cacheConf, fs).withOutputDir(
 {noformat}
 I got:
 java.lang.AssertionError: 
 expected:testRow0197/testCf:testQual/1400712260004/Put/vlen=13/mvcc=5 
 but was:testRow0198/testCf:testQual/1400712260004/   Put/vlen=13/mvcc=0
   at org.junit.Assert.fail(Assert.java:88)
   at org.junit.Assert.failNotEquals(Assert.java:743)
   at org.junit.Assert.assertEquals(Assert.java:118)
   at org.junit.Assert.assertEquals(Assert.java:144)
   at 
 org.apache.hadoop.hbase.regionserver.TestReversibleScanners.seekTestOfReversibleKeyValueScanner(TestReversibleScanners.java:533)
   at 
 org.apache.hadoop.hbase.regionserver.TestReversibleScanners.testReversibleStoreFileScanner(TestReversibleScanners.java:108)
 After debugging, it seems the method of 
 FastDiffDeltaEncoder#getFirstKeyInBlock become broken. And it will cause 
 hfilescanner#seekBefore returns wrong result.
 The solution is simple, see the patch.



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[jira] [Commented] (HBASE-11149) Wire encryption is broken

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11149?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008454#comment-14008454
 ] 

Hudson commented on HBASE-11149:


SUCCESS: Integrated in HBase-TRUNK #5140 (See 
[https://builds.apache.org/job/HBase-TRUNK/5140/])
HBASE-11149. Addendum for fixing unit test (ddas: rev 
e9017586ca16d428d2d596bbe816fbaf2467e20c)
* 
hbase-server/src/test/java/org/apache/hadoop/hbase/security/TestHBaseSaslRpcClient.java


 Wire encryption is broken
 -

 Key: HBASE-11149
 URL: https://issues.apache.org/jira/browse/HBASE-11149
 Project: HBase
  Issue Type: Bug
  Components: IPC/RPC
Reporter: Devaraj Das
Assignee: Devaraj Das
 Fix For: 0.99.0, 0.96.3, 0.98.3

 Attachments: 11149-1.txt, 11149-2-addendum.txt, 11149-2.txt


 Upon some testing with the QOP configuration (hbase.rpc.protection), 
 discovered that RPC doesn't work with integrity and privacy values for 
 the configuration key. I was using 0.98.x for testing but I believe the issue 
 is there in trunk as well (haven't checked 0.96 and 0.94).



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[jira] [Commented] (HBASE-11161) Provide example of POJO encoding with protobuf

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11161?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008456#comment-14008456
 ] 

Hudson commented on HBASE-11161:


SUCCESS: Integrated in HBase-TRUNK #5140 (See 
[https://builds.apache.org/job/HBase-TRUNK/5140/])
HBASE-11161 Provide example of POJO encoding with protobuf (Nick Dimiduk) 
(apurtell: rev 8b145419edac5d5d29e0e7d5718f60635e355500)
* hbase-examples/src/test/java/org/apache/hadoop/hbase/types/TestPBCell.java
* hbase-examples/src/main/java/org/apache/hadoop/hbase/types/PBCell.java
* hbase-common/src/main/java/org/apache/hadoop/hbase/types/PBType.java
Amend HBASE-11161 Provide example of POJO encoding with protobuf; Add explicit 
dependency on protobuf-java to hbase-common for Hadoop 1 (apurtell: rev 
b85cbbdea920525f9c019c0ac9187590943fcc27)
* hbase-common/pom.xml


 Provide example of POJO encoding with protobuf
 --

 Key: HBASE-11161
 URL: https://issues.apache.org/jira/browse/HBASE-11161
 Project: HBase
  Issue Type: Sub-task
  Components: Client
Reporter: Nick Dimiduk
Assignee: Nick Dimiduk
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11161-addendum.patch, HBASE-11161.01-0.98.patch, 
 HBASE-11161.01.patch, pbtype_example.patch


 It would be nice to see how to use the DataType API with some out-of-the-box 
 data serialization tools. This ticket is to provide such an example using 
 Protobuf, since we already ship that dependency.



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[jira] [Commented] (HBASE-9857) Blockcache prefetch option

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9857?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008453#comment-14008453
 ] 

Hudson commented on HBASE-9857:
---

SUCCESS: Integrated in HBase-TRUNK #5140 (See 
[https://builds.apache.org/job/HBase-TRUNK/5140/])
Amend HBASE-9857 Blockcache prefetch option; add missing license header to 
correct file this time (apurtell: rev be85f89cd4508de5337820a2694d5262c6d69092)
* 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java
* 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/PrefetchExecutor.java


 Blockcache prefetch option
 --

 Key: HBASE-9857
 URL: https://issues.apache.org/jira/browse/HBASE-9857
 Project: HBase
  Issue Type: Improvement
Reporter: Andrew Purtell
Assignee: Andrew Purtell
Priority: Minor
 Fix For: 0.99.0, 0.98.3

 Attachments: 9857.patch, 9857.patch, HBASE-9857-0.98.patch, 
 HBASE-9857-trunk.patch, HBASE-9857-trunk.patch


 Attached patch implements a prefetching function for HFile (v3) blocks, if 
 indicated by a column family or regionserver property. The purpose of this 
 change is to as rapidly after region open as reasonable warm the blockcache 
 with all the data and index blocks of (presumably also in-memory) table data, 
 without counting those block loads as cache misses. Great for fast reads and 
 keeping the cache hit ratio high. Can tune the IO impact versus time until 
 all data blocks are in cache. Works a bit like CompactSplitThread. Makes some 
 effort not to stampede.
 I have been using this for setting up various experiments and thought I'd 
 polish it up a bit and throw it out there. If the data to be preloaded will 
 not fit in blockcache, or if as a percentage of blockcache it is large, this 
 is not a good idea, will just blow out the cache and trigger a lot of useless 
 GC activity. Might be useful as an expert tuning option though. Or not.



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[jira] [Commented] (HBASE-11227) Mention 8- and 16-bit fixed-with encodings in OrderedBytes docstring

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11227?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008455#comment-14008455
 ] 

Hudson commented on HBASE-11227:


SUCCESS: Integrated in HBase-TRUNK #5140 (See 
[https://builds.apache.org/job/HBase-TRUNK/5140/])
HBASE-11227 Mention 8- and 16-bit fixed-with encodings in OrderedBytes 
docstring (Nick Dimiduk) (apurtell: rev 
30aab8b5ea667b97f7a161893cf98b82d7f34fc6)
* hbase-common/src/main/java/org/apache/hadoop/hbase/util/OrderedBytes.java


 Mention 8- and 16-bit fixed-with encodings in OrderedBytes docstring
 

 Key: HBASE-11227
 URL: https://issues.apache.org/jira/browse/HBASE-11227
 Project: HBase
  Issue Type: Task
  Components: documentation
Affects Versions: 0.95.2
Reporter: Nick Dimiduk
Assignee: Nick Dimiduk
Priority: Trivial
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11227.00.patch


 Per title.



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[jira] [Commented] (HBASE-11238) Add info about SlabCache and BucketCache to Ref Guide

2014-05-25 Thread Misty Stanley-Jones (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11238?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008457#comment-14008457
 ] 

Misty Stanley-Jones commented on HBASE-11238:
-

My thinking was that this is a config setting, not a development setting. I 
wouldn't normally look in Javadoc for a config setting. But maybe it's 
different in HBase-land? If you want to keep it in Javadoc, do you like my 
version or have I lost some of the meaning in the rewrite?

 Add info about SlabCache and BucketCache to Ref Guide
 -

 Key: HBASE-11238
 URL: https://issues.apache.org/jira/browse/HBASE-11238
 Project: HBase
  Issue Type: Bug
  Components: documentation
Affects Versions: 0.98.2
Reporter: Misty Stanley-Jones
Assignee: Misty Stanley-Jones
 Attachments: HBASE-11238.patch


 Upstream issues: HBASE-11171 and HBASE-11098. Could back port some of what is 
 in these issues, the package-info.java class for instance.



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[jira] [Assigned] (HBASE-11250) Document: CLONE - Fix jersey serialization/deserialization of json objects

2014-05-25 Thread Misty Stanley-Jones (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11250?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Misty Stanley-Jones reassigned HBASE-11250:
---

Assignee: Misty Stanley-Jones  (was: Francis Liu)

 Document: CLONE - Fix jersey serialization/deserialization of json objects
 --

 Key: HBASE-11250
 URL: https://issues.apache.org/jira/browse/HBASE-11250
 Project: HBase
  Issue Type: Bug
  Components: documentation, REST
Affects Versions: 0.92.2
Reporter: Misty Stanley-Jones
Assignee: Misty Stanley-Jones
Priority: Blocker

 Stargate uses the default json marshaller/unmarshaller in natural mode. In 
 this mode the unmarshaller has trouble unmarshalling json instances. 
 This patch fixes this issue by using jackson as the marshaller/unmarshaller 
 instead. 
 I've also updated all the model unit tests to test json 
 serialization/deserialization. Backwards compatibilty can be verified by 
 modify the test base class to use the original marshaller/unmarshaller and 
 see that model tests pass.
 The patch is backward compatible except for StorageClusterStatusModel, which 
 is broken anyway. It only shows one node in the liveNodes field.



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[jira] [Created] (HBASE-11250) Document: CLONE - Fix jersey serialization/deserialization of json objects

2014-05-25 Thread Misty Stanley-Jones (JIRA)
Misty Stanley-Jones created HBASE-11250:
---

 Summary: Document: CLONE - Fix jersey 
serialization/deserialization of json objects
 Key: HBASE-11250
 URL: https://issues.apache.org/jira/browse/HBASE-11250
 Project: HBase
  Issue Type: Bug
  Components: REST
Reporter: Misty Stanley-Jones
Assignee: Francis Liu
Priority: Blocker
 Fix For: 0.98.0, 0.96.0


Stargate uses the default json marshaller/unmarshaller in natural mode. In this 
mode the unmarshaller has trouble unmarshalling json instances. 

This patch fixes this issue by using jackson as the marshaller/unmarshaller 
instead. 

I've also updated all the model unit tests to test json 
serialization/deserialization. Backwards compatibilty can be verified by modify 
the test base class to use the original marshaller/unmarshaller and see that 
model tests pass.

The patch is backward compatible except for StorageClusterStatusModel, which is 
broken anyway. It only shows one node in the liveNodes field.







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[jira] [Updated] (HBASE-11250) Document: CLONE - Fix jersey serialization/deserialization of json objects

2014-05-25 Thread Misty Stanley-Jones (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11250?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Misty Stanley-Jones updated HBASE-11250:


Fix Version/s: (was: 0.96.0)
   (was: 0.98.0)

 Document: CLONE - Fix jersey serialization/deserialization of json objects
 --

 Key: HBASE-11250
 URL: https://issues.apache.org/jira/browse/HBASE-11250
 Project: HBase
  Issue Type: Bug
  Components: documentation, REST
Affects Versions: 0.92.2
Reporter: Misty Stanley-Jones
Assignee: Francis Liu
Priority: Blocker

 Stargate uses the default json marshaller/unmarshaller in natural mode. In 
 this mode the unmarshaller has trouble unmarshalling json instances. 
 This patch fixes this issue by using jackson as the marshaller/unmarshaller 
 instead. 
 I've also updated all the model unit tests to test json 
 serialization/deserialization. Backwards compatibilty can be verified by 
 modify the test base class to use the original marshaller/unmarshaller and 
 see that model tests pass.
 The patch is backward compatible except for StorageClusterStatusModel, which 
 is broken anyway. It only shows one node in the liveNodes field.



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[jira] [Updated] (HBASE-11250) Document: CLONE - Fix jersey serialization/deserialization of json objects

2014-05-25 Thread Misty Stanley-Jones (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11250?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Misty Stanley-Jones updated HBASE-11250:


Affects Version/s: 0.92.2

 Document: CLONE - Fix jersey serialization/deserialization of json objects
 --

 Key: HBASE-11250
 URL: https://issues.apache.org/jira/browse/HBASE-11250
 Project: HBase
  Issue Type: Bug
  Components: documentation, REST
Affects Versions: 0.92.2
Reporter: Misty Stanley-Jones
Assignee: Francis Liu
Priority: Blocker

 Stargate uses the default json marshaller/unmarshaller in natural mode. In 
 this mode the unmarshaller has trouble unmarshalling json instances. 
 This patch fixes this issue by using jackson as the marshaller/unmarshaller 
 instead. 
 I've also updated all the model unit tests to test json 
 serialization/deserialization. Backwards compatibilty can be verified by 
 modify the test base class to use the original marshaller/unmarshaller and 
 see that model tests pass.
 The patch is backward compatible except for StorageClusterStatusModel, which 
 is broken anyway. It only shows one node in the liveNodes field.



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[jira] [Updated] (HBASE-11250) Document: CLONE - Fix jersey serialization/deserialization of json objects

2014-05-25 Thread Misty Stanley-Jones (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11250?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Misty Stanley-Jones updated HBASE-11250:


Component/s: documentation

 Document: CLONE - Fix jersey serialization/deserialization of json objects
 --

 Key: HBASE-11250
 URL: https://issues.apache.org/jira/browse/HBASE-11250
 Project: HBase
  Issue Type: Bug
  Components: documentation, REST
Affects Versions: 0.92.2
Reporter: Misty Stanley-Jones
Assignee: Francis Liu
Priority: Blocker

 Stargate uses the default json marshaller/unmarshaller in natural mode. In 
 this mode the unmarshaller has trouble unmarshalling json instances. 
 This patch fixes this issue by using jackson as the marshaller/unmarshaller 
 instead. 
 I've also updated all the model unit tests to test json 
 serialization/deserialization. Backwards compatibilty can be verified by 
 modify the test base class to use the original marshaller/unmarshaller and 
 see that model tests pass.
 The patch is backward compatible except for StorageClusterStatusModel, which 
 is broken anyway. It only shows one node in the liveNodes field.



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[jira] [Commented] (HBASE-11226) Document and increase the default value for hbase.hstore.flusher.count

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11226?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008467#comment-14008467
 ] 

Hudson commented on HBASE-11226:


SUCCESS: Integrated in HBase-0.98-on-Hadoop-1.1 #295 (See 
[https://builds.apache.org/job/HBase-0.98-on-Hadoop-1.1/295/])
HBASE-11226 Document and increase the default value for 
hbase.hstore.flusher.count (nkeywal: rev 
996705c61de1c7b533024dcb41cc571531ebfbb9)
* 
hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/MemStoreFlusher.java
* hbase-common/src/main/resources/hbase-default.xml


 Document and increase the default value for hbase.hstore.flusher.count
 --

 Key: HBASE-11226
 URL: https://issues.apache.org/jira/browse/HBASE-11226
 Project: HBase
  Issue Type: Bug
  Components: regionserver
Affects Versions: 0.99.0, 0.98.2
Reporter: Nicolas Liochon
Assignee: Nicolas Liochon
 Fix For: 0.99.0, 0.98.3

 Attachments: 11226.v1.patch


 HBASE-6466 add the possibility to have multiple threads for the flusher.
 The default value is 1, but this should be incremented to 2 reasons:
  - I've observed that the flush of a region can be delayed because another is 
 in progress. During a write load, this leads to an increased latency because 
 the memstore size increases and then block the client
  - if, by accident, a flusher hits a slow or bad datanode, all the flush will 
 have to wait until the timeouts expires. With 2 or more flushers and some 
 luck the other regions will be flushed by the second thread. 
 Lastly this setting is important enough to be documented in the standard 
 hbase site imho.
 I think it's important enough to go in the .98 branch as well
 There will be an impact: as the flush won't be queued (or less queued) we may 
 have more compactions...



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[jira] [Commented] (HBASE-11161) Provide example of POJO encoding with protobuf

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11161?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008471#comment-14008471
 ] 

Hudson commented on HBASE-11161:


SUCCESS: Integrated in HBase-0.98-on-Hadoop-1.1 #295 (See 
[https://builds.apache.org/job/HBase-0.98-on-Hadoop-1.1/295/])
HBASE-11161 Provide example of POJO encoding with protobuf (Nick Dimiduk) 
(apurtell: rev d73711c800415250e5543cf22db486074c8ce815)
* hbase-common/src/main/java/org/apache/hadoop/hbase/types/PBType.java
* hbase-examples/src/main/java/org/apache/hadoop/hbase/types/PBCell.java
* hbase-examples/src/test/java/org/apache/hadoop/hbase/types/TestPBCell.java
Amend HBASE-11161 Provide example of POJO encoding with protobuf; Add explicit 
dependency on protobuf-java to hbase-common for Hadoop 1 (apurtell: rev 
503709fdf67d335fcb96f9a60a4b971de01479e1)
* hbase-common/pom.xml


 Provide example of POJO encoding with protobuf
 --

 Key: HBASE-11161
 URL: https://issues.apache.org/jira/browse/HBASE-11161
 Project: HBase
  Issue Type: Sub-task
  Components: Client
Reporter: Nick Dimiduk
Assignee: Nick Dimiduk
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11161-addendum.patch, HBASE-11161.01-0.98.patch, 
 HBASE-11161.01.patch, pbtype_example.patch


 It would be nice to see how to use the DataType API with some out-of-the-box 
 data serialization tools. This ticket is to provide such an example using 
 Protobuf, since we already ship that dependency.



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[jira] [Commented] (HBASE-11137) Add mapred.TableSnapshotInputFormat

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11137?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008466#comment-14008466
 ] 

Hudson commented on HBASE-11137:


SUCCESS: Integrated in HBase-0.98-on-Hadoop-1.1 #295 (See 
[https://builds.apache.org/job/HBase-0.98-on-Hadoop-1.1/295/])
Amend HBASE-11137 Add mapred.TableSnapshotInputFormat; add missing license 
headers on branch 0.98 (apurtell: rev 568bfe416c1c880c84dbb4a11cdbe61aea9717a2)
* 
hbase-server/src/main/java/org/apache/hadoop/hbase/mapred/TableSnapshotInputFormat.java
* 
hbase-server/src/main/java/org/apache/hadoop/hbase/mapreduce/TableSnapshotInputFormatImpl.java


 Add mapred.TableSnapshotInputFormat
 ---

 Key: HBASE-11137
 URL: https://issues.apache.org/jira/browse/HBASE-11137
 Project: HBase
  Issue Type: Improvement
  Components: mapreduce, Performance
Affects Versions: 0.98.0, 0.96.2
Reporter: Nick Dimiduk
Assignee: Nick Dimiduk
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11137.00-0.98.patch, HBASE-11137.00.patch, 
 HBASE-11137.01.patch, HBASE-11137.01_rerun.patch, HBASE-11137.02-0.98.patch, 
 HBASE-11137.02.patch


 We should have feature parity between mapreduce and mapred implementations. 
 This is important for Hive.



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[jira] [Commented] (HBASE-11149) Wire encryption is broken

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11149?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008468#comment-14008468
 ] 

Hudson commented on HBASE-11149:


SUCCESS: Integrated in HBase-0.98-on-Hadoop-1.1 #295 (See 
[https://builds.apache.org/job/HBase-0.98-on-Hadoop-1.1/295/])
HBASE-11149. Addendum for fixing unit test (apurtell: rev 
52dd30727a35b1b56ef2c474065ae206811d4a09)
* 
hbase-server/src/test/java/org/apache/hadoop/hbase/security/TestHBaseSaslRpcClient.java


 Wire encryption is broken
 -

 Key: HBASE-11149
 URL: https://issues.apache.org/jira/browse/HBASE-11149
 Project: HBase
  Issue Type: Bug
  Components: IPC/RPC
Reporter: Devaraj Das
Assignee: Devaraj Das
 Fix For: 0.99.0, 0.96.3, 0.98.3

 Attachments: 11149-1.txt, 11149-2-addendum.txt, 11149-2.txt


 Upon some testing with the QOP configuration (hbase.rpc.protection), 
 discovered that RPC doesn't work with integrity and privacy values for 
 the configuration key. I was using 0.98.x for testing but I believe the issue 
 is there in trunk as well (haven't checked 0.96 and 0.94).



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[jira] [Commented] (HBASE-9857) Blockcache prefetch option

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9857?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008465#comment-14008465
 ] 

Hudson commented on HBASE-9857:
---

SUCCESS: Integrated in HBase-0.98-on-Hadoop-1.1 #295 (See 
[https://builds.apache.org/job/HBase-0.98-on-Hadoop-1.1/295/])
Amend HBASE-9857 Blockcache prefetch option; add missing license header to 
correct file this time (apurtell: rev a260c862a71c6433213e6619c4de004250468c83)
* 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java
* 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/PrefetchExecutor.java


 Blockcache prefetch option
 --

 Key: HBASE-9857
 URL: https://issues.apache.org/jira/browse/HBASE-9857
 Project: HBase
  Issue Type: Improvement
Reporter: Andrew Purtell
Assignee: Andrew Purtell
Priority: Minor
 Fix For: 0.99.0, 0.98.3

 Attachments: 9857.patch, 9857.patch, HBASE-9857-0.98.patch, 
 HBASE-9857-trunk.patch, HBASE-9857-trunk.patch


 Attached patch implements a prefetching function for HFile (v3) blocks, if 
 indicated by a column family or regionserver property. The purpose of this 
 change is to as rapidly after region open as reasonable warm the blockcache 
 with all the data and index blocks of (presumably also in-memory) table data, 
 without counting those block loads as cache misses. Great for fast reads and 
 keeping the cache hit ratio high. Can tune the IO impact versus time until 
 all data blocks are in cache. Works a bit like CompactSplitThread. Makes some 
 effort not to stampede.
 I have been using this for setting up various experiments and thought I'd 
 polish it up a bit and throw it out there. If the data to be preloaded will 
 not fit in blockcache, or if as a percentage of blockcache it is large, this 
 is not a good idea, will just blow out the cache and trigger a lot of useless 
 GC activity. Might be useful as an expert tuning option though. Or not.



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[jira] [Commented] (HBASE-11227) Mention 8- and 16-bit fixed-with encodings in OrderedBytes docstring

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11227?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008469#comment-14008469
 ] 

Hudson commented on HBASE-11227:


SUCCESS: Integrated in HBase-0.98-on-Hadoop-1.1 #295 (See 
[https://builds.apache.org/job/HBase-0.98-on-Hadoop-1.1/295/])
HBASE-11227 Mention 8- and 16-bit fixed-with encodings in OrderedBytes 
docstring (Nick Dimiduk) (apurtell: rev 
2aed26ae6f9f3b7e961d0d92aebad41ecd2b200c)
* hbase-common/src/main/java/org/apache/hadoop/hbase/util/OrderedBytes.java


 Mention 8- and 16-bit fixed-with encodings in OrderedBytes docstring
 

 Key: HBASE-11227
 URL: https://issues.apache.org/jira/browse/HBASE-11227
 Project: HBase
  Issue Type: Task
  Components: documentation
Affects Versions: 0.95.2
Reporter: Nick Dimiduk
Assignee: Nick Dimiduk
Priority: Trivial
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11227.00.patch


 Per title.



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[jira] [Commented] (HBASE-11209) Increase the default value for hbase.hregion.memstore.block.multipler from 2 to 4

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11209?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008464#comment-14008464
 ] 

Hudson commented on HBASE-11209:


SUCCESS: Integrated in HBase-0.98-on-Hadoop-1.1 #295 (See 
[https://builds.apache.org/job/HBase-0.98-on-Hadoop-1.1/295/])
HBASE-11209 Increase the default value for 
hbase.hregion.memstore.block.multipler from 2 to 4 (nkeywal: rev 
5521dfe6f05c8f49f2ebfa1c54b80169f2296a83)
* hbase-common/src/main/resources/hbase-default.xml


 Increase the default value for hbase.hregion.memstore.block.multipler from 2 
 to 4
 -

 Key: HBASE-11209
 URL: https://issues.apache.org/jira/browse/HBASE-11209
 Project: HBase
  Issue Type: Brainstorming
  Components: regionserver
Affects Versions: 0.99.0, 0.98.2
Reporter: Nicolas Liochon
Assignee: Nicolas Liochon
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11209.patch


 On a YCSB test, I saw a 33% performance increase, both on the max latency and 
 on the throughput. I'm convinced enough that this value is better that I 
 think it makes sense to change it on 0.98 as well.
 More fundamentally, but outside of the scope of this patch, I think this 
 parameter should be changed to something at the region server level: today, 
 we have:
 - global memstore check: if we're other 40%, we flush the biggest memstore
 - local: no more than 2 (proposed: 4) memstore size per region.
 But if we have enough memory and a spike on a region, there is no reason for 
 not taking the write.



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[jira] [Commented] (HBASE-11234) FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong result

2014-05-25 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11234?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008470#comment-14008470
 ] 

Hudson commented on HBASE-11234:


SUCCESS: Integrated in HBase-0.98-on-Hadoop-1.1 #295 (See 
[https://builds.apache.org/job/HBase-0.98-on-Hadoop-1.1/295/])
Revert HBASE-11234 FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong 
result (apurtell: rev b985e4fd0ebdd920b5c3b33dd5549713d82fa16a)
* 
hbase-common/src/main/java/org/apache/hadoop/hbase/io/encoding/FastDiffDeltaEncoder.java
* 
hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
* 
hbase-common/src/main/java/org/apache/hadoop/hbase/io/encoding/PrefixKeyDeltaEncoder.java


 FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong result
 

 Key: HBASE-11234
 URL: https://issues.apache.org/jira/browse/HBASE-11234
 Project: HBase
  Issue Type: Bug
Reporter: chunhui shen
Assignee: chunhui shen
Priority: Critical
 Fix For: 0.99.0, 0.96.3, 0.94.21, 0.98.4

 Attachments: 11234-94.patch, 11234-96.patch, 
 11234-98-with-prefix-tree.txt, 11234-trunk.addendum, HBASE-11234.patch


 As Ted found, 
 With this change:
 {noformat}
 Index: 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
 ===
 --- 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
(revision 1596579)
 +++ 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
(working copy)
 @@ -51,6 +51,7 @@
  import org.apache.hadoop.hbase.filter.FilterList.Operator;
  import org.apache.hadoop.hbase.filter.PageFilter;
  import org.apache.hadoop.hbase.filter.SingleColumnValueFilter;
 +import org.apache.hadoop.hbase.io.encoding.DataBlockEncoding;
  import org.apache.hadoop.hbase.io.hfile.CacheConfig;
  import org.apache.hadoop.hbase.io.hfile.HFileContext;
  import org.apache.hadoop.hbase.io.hfile.HFileContextBuilder;
 @@ -90,6 +91,7 @@
  CacheConfig cacheConf = new CacheConfig(TEST_UTIL.getConfiguration());
  HFileContextBuilder hcBuilder = new HFileContextBuilder();
  hcBuilder.withBlockSize(2 * 1024);
 +hcBuilder.withDataBlockEncoding(DataBlockEncoding.FAST_DIFF);
  HFileContext hFileContext = hcBuilder.build();
  StoreFile.Writer writer = new StoreFile.WriterBuilder(
  TEST_UTIL.getConfiguration(), cacheConf, fs).withOutputDir(
 {noformat}
 I got:
 java.lang.AssertionError: 
 expected:testRow0197/testCf:testQual/1400712260004/Put/vlen=13/mvcc=5 
 but was:testRow0198/testCf:testQual/1400712260004/   Put/vlen=13/mvcc=0
   at org.junit.Assert.fail(Assert.java:88)
   at org.junit.Assert.failNotEquals(Assert.java:743)
   at org.junit.Assert.assertEquals(Assert.java:118)
   at org.junit.Assert.assertEquals(Assert.java:144)
   at 
 org.apache.hadoop.hbase.regionserver.TestReversibleScanners.seekTestOfReversibleKeyValueScanner(TestReversibleScanners.java:533)
   at 
 org.apache.hadoop.hbase.regionserver.TestReversibleScanners.testReversibleStoreFileScanner(TestReversibleScanners.java:108)
 After debugging, it seems the method of 
 FastDiffDeltaEncoder#getFirstKeyInBlock become broken. And it will cause 
 hfilescanner#seekBefore returns wrong result.
 The solution is simple, see the patch.



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[jira] [Commented] (HBASE-11250) Document: CLONE - Fix jersey serialization/deserialization of json objects

2014-05-25 Thread Misty Stanley-Jones (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11250?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008473#comment-14008473
 ] 

Misty Stanley-Jones commented on HBASE-11250:
-

This should be updated at the Wiki: http://wiki.apache.org/hadoop/Hbase/Stargate

 Document: CLONE - Fix jersey serialization/deserialization of json objects
 --

 Key: HBASE-11250
 URL: https://issues.apache.org/jira/browse/HBASE-11250
 Project: HBase
  Issue Type: Bug
  Components: documentation, REST
Affects Versions: 0.92.2
Reporter: Misty Stanley-Jones
Assignee: Misty Stanley-Jones
Priority: Blocker

 Stargate uses the default json marshaller/unmarshaller in natural mode. In 
 this mode the unmarshaller has trouble unmarshalling json instances. 
 This patch fixes this issue by using jackson as the marshaller/unmarshaller 
 instead. 
 I've also updated all the model unit tests to test json 
 serialization/deserialization. Backwards compatibilty can be verified by 
 modify the test base class to use the original marshaller/unmarshaller and 
 see that model tests pass.
 The patch is backward compatible except for StorageClusterStatusModel, which 
 is broken anyway. It only shows one node in the liveNodes field.



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[jira] [Commented] (HBASE-11218) Data loss in HBase standalone mode

2014-05-25 Thread Liu Shaohui (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11218?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008526#comment-14008526
 ] 

Liu Shaohui commented on HBASE-11218:
-

[~nkeywal]
The comparison done in my dev machine is following
||case||trunk||HBASE-11218||
|small tests|6m32.725s|6m34.124s|
|medium tests|91m23.238s|93m6.703s|
|large tests|154m58.474s|150m42.585s|

The test time increase is very little.


 Data loss in HBase standalone mode
 --

 Key: HBASE-11218
 URL: https://issues.apache.org/jira/browse/HBASE-11218
 Project: HBase
  Issue Type: Bug
Reporter: Liu Shaohui
Assignee: Liu Shaohui
 Fix For: 0.99.0

 Attachments: HBASE-11218-trunk-v1.diff


 Data loss in HBase standalone mode.
 *How to produce it*
 # Start HBase standalone mode.
 # Create a table using hbase shell.
 # Scan '.META.' and you will find data in meta table
 # Kill the HBase process with -9 option
 # Start the HBase agaion
 # Scan '.META.' and you will find nothing in meta table.
 *There are three main reasons.*
 # FSDataOutputStream.sync should call flush() if the underlying wrapped 
 stream is not Syncable. See HADOOP-8861
 # writeChecksum is ture in  default LocalFileSystem and the 
 ChecksumFSOutputSummer will buffer the data, which make the waledits are not 
 written to os's filesystem with sync method immediately, and those edits will 
 be lost in regionserver's failover.
 #  The MiniZooKeeperCluster deletes the old zk data at startup which maye 
 cause data loss in meta table. The failover procedure is: split pre root 
 regionserver's hlog - assign root - split pre meta regionserver's hlog - 
 assign meta - split all other regionservers' hlogs - assign other regions. 
 If there is no data in zookeeper, we will get null for root regionserver and 
 then assign root table. Some data in root table maybe be lost for some root's 
 WalEdits have not been splited and replayed. So does the Meta table.
 I finished the patch for 0.94 and am working on the patch for trunk. 
 Suggestions are welcomed.



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[jira] [Commented] (HBASE-11218) Data loss in HBase standalone mode

2014-05-25 Thread Liu Shaohui (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11218?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008527#comment-14008527
 ] 

Liu Shaohui commented on HBASE-11218:
-

[~enis]
{quote}
in pseudo distributed mode, where there is an actual RS, but still using the 
local fs, there still will be data loss with this patch from my understanding
{quote}
Yes.  but I think  the data loss in pseudo distributed mode caused by hardware 
failure is accepted,  data loss caused by the HBase's implement is not accepted 
and we should fix it.


 Data loss in HBase standalone mode
 --

 Key: HBASE-11218
 URL: https://issues.apache.org/jira/browse/HBASE-11218
 Project: HBase
  Issue Type: Bug
Reporter: Liu Shaohui
Assignee: Liu Shaohui
 Fix For: 0.99.0

 Attachments: HBASE-11218-trunk-v1.diff


 Data loss in HBase standalone mode.
 *How to produce it*
 # Start HBase standalone mode.
 # Create a table using hbase shell.
 # Scan '.META.' and you will find data in meta table
 # Kill the HBase process with -9 option
 # Start the HBase agaion
 # Scan '.META.' and you will find nothing in meta table.
 *There are three main reasons.*
 # FSDataOutputStream.sync should call flush() if the underlying wrapped 
 stream is not Syncable. See HADOOP-8861
 # writeChecksum is ture in  default LocalFileSystem and the 
 ChecksumFSOutputSummer will buffer the data, which make the waledits are not 
 written to os's filesystem with sync method immediately, and those edits will 
 be lost in regionserver's failover.
 #  The MiniZooKeeperCluster deletes the old zk data at startup which maye 
 cause data loss in meta table. The failover procedure is: split pre root 
 regionserver's hlog - assign root - split pre meta regionserver's hlog - 
 assign meta - split all other regionservers' hlogs - assign other regions. 
 If there is no data in zookeeper, we will get null for root regionserver and 
 then assign root table. Some data in root table maybe be lost for some root's 
 WalEdits have not been splited and replayed. So does the Meta table.
 I finished the patch for 0.94 and am working on the patch for trunk. 
 Suggestions are welcomed.



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[jira] [Updated] (HBASE-10771) Primitive type put/get APIs in ByteRange

2014-05-25 Thread Anoop Sam John (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-10771?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Anoop Sam John updated HBASE-10771:
---

Attachment: HBASE-10771_V4.patch

Andy helped me to run a test for checking the inlining of put/getxxx() APIs.
As per that org.apache.hadoop.hbase.util.Bytes#explainWrongLengthOrOffset () is 
too big for inlining.  The patch changes the getxxx() API to not to use 
Bytes#putxxx API.  That code is copy pasted to SimpleByteRange without the 
sanity checking.
Also addressed comment about adding a test where lots of KV are written and 
read back from a PBR.

 Primitive type put/get APIs in ByteRange 
 -

 Key: HBASE-10771
 URL: https://issues.apache.org/jira/browse/HBASE-10771
 Project: HBase
  Issue Type: Improvement
Reporter: Anoop Sam John
Assignee: Anoop Sam John
 Fix For: 0.99.0

 Attachments: HBASE-10771.patch, HBASE-10771_V2.patch, 
 HBASE-10771_V3.patch, HBASE-10771_V4.patch


 While doing HBASE-10713 I came across the need to write int/long (and read 
 also) from a ByteRange.  CellBlocks are backed by ByteRange. So we can add 
 such APIs.
 Also as per HBASE-10750  we return a ByteRange from MSLAB and also discussion 
 under HBASE-10191 suggest we can have BR backed HFileBlocks etc.  



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[jira] [Created] (HBASE-11251) LoadTestTool should grant READ permission for the users that are given READ access

2014-05-25 Thread ramkrishna.s.vasudevan (JIRA)
ramkrishna.s.vasudevan created HBASE-11251:
--

 Summary: LoadTestTool should grant READ permission for the users 
that are given READ access
 Key: HBASE-11251
 URL: https://issues.apache.org/jira/browse/HBASE-11251
 Project: HBase
  Issue Type: Bug
Affects Versions: 0.98.2
Reporter: ramkrishna.s.vasudevan
Assignee: ramkrishna.s.vasudevan
 Fix For: 0.98.3


In 0.98.2 onwards the AccessControlFilter
{code}
case CHECK_CELL_FIRST: {
LOG.info(Am coming here for cell first strategy);
if (authManager.authorize(user, table, cell, Permission.Action.READ) 
authManager.authorize(user, table, family, qualifier, 
Permission.Action.READ)) {
  LOG.info(Returning include);
  return ReturnCode.INCLUDE;
}
{code}
expects a READ permission on the table for those Users that are granted READ 
permission on the cell level.
In 0.98.1
{code}
if (authManager.authorize(user, table, cell, cellFirstStrategy, 
Permission.Action.READ)) {
  return ReturnCode.INCLUDE;
}
{code}
So from 0.98.2 onwards IntegrationTestIngestWithACL was failing.  Hence this 
JIRA is targeted to correct the behaviour and make the IT work again.




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[jira] [Updated] (HBASE-11251) LoadTestTool should grant READ permission for the users that are given READ access for specific cells

2014-05-25 Thread ramkrishna.s.vasudevan (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11251?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

ramkrishna.s.vasudevan updated HBASE-11251:
---

Summary: LoadTestTool should grant READ permission for the users that are 
given READ access for specific cells  (was: LoadTestTool should grant READ 
permission for the users that are given READ access)

 LoadTestTool should grant READ permission for the users that are given READ 
 access for specific cells
 -

 Key: HBASE-11251
 URL: https://issues.apache.org/jira/browse/HBASE-11251
 Project: HBase
  Issue Type: Bug
Affects Versions: 0.98.2
Reporter: ramkrishna.s.vasudevan
Assignee: ramkrishna.s.vasudevan
 Fix For: 0.98.3


 In 0.98.2 onwards the AccessControlFilter
 {code}
 case CHECK_CELL_FIRST: {
 LOG.info(Am coming here for cell first strategy);
 if (authManager.authorize(user, table, cell, Permission.Action.READ) 
 
 authManager.authorize(user, table, family, qualifier, 
 Permission.Action.READ)) {
   LOG.info(Returning include);
   return ReturnCode.INCLUDE;
 }
 {code}
 expects a READ permission on the table for those Users that are granted READ 
 permission on the cell level.
 In 0.98.1
 {code}
 if (authManager.authorize(user, table, cell, cellFirstStrategy, 
 Permission.Action.READ)) {
   return ReturnCode.INCLUDE;
 }
 {code}
 So from 0.98.2 onwards IntegrationTestIngestWithACL was failing.  Hence this 
 JIRA is targeted to correct the behaviour and make the IT work again.



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[jira] [Updated] (HBASE-11251) LoadTestTool should grant READ permission for the users that are given READ access for specific cells

2014-05-25 Thread ramkrishna.s.vasudevan (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11251?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

ramkrishna.s.vasudevan updated HBASE-11251:
---

Fix Version/s: 0.99.0

 LoadTestTool should grant READ permission for the users that are given READ 
 access for specific cells
 -

 Key: HBASE-11251
 URL: https://issues.apache.org/jira/browse/HBASE-11251
 Project: HBase
  Issue Type: Bug
Affects Versions: 0.98.2
Reporter: ramkrishna.s.vasudevan
Assignee: ramkrishna.s.vasudevan
 Fix For: 0.99.0, 0.98.3


 In 0.98.2 onwards the AccessControlFilter
 {code}
 case CHECK_CELL_FIRST: {
 LOG.info(Am coming here for cell first strategy);
 if (authManager.authorize(user, table, cell, Permission.Action.READ) 
 
 authManager.authorize(user, table, family, qualifier, 
 Permission.Action.READ)) {
   LOG.info(Returning include);
   return ReturnCode.INCLUDE;
 }
 {code}
 expects a READ permission on the table for those Users that are granted READ 
 permission on the cell level.
 In 0.98.1
 {code}
 if (authManager.authorize(user, table, cell, cellFirstStrategy, 
 Permission.Action.READ)) {
   return ReturnCode.INCLUDE;
 }
 {code}
 So from 0.98.2 onwards IntegrationTestIngestWithACL was failing.  Hence this 
 JIRA is targeted to correct the behaviour and make the IT work again.



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[jira] [Updated] (HBASE-11251) LoadTestTool should grant READ permission for the users that are given READ access for specific cells

2014-05-25 Thread ramkrishna.s.vasudevan (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11251?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

ramkrishna.s.vasudevan updated HBASE-11251:
---

Status: Patch Available  (was: Open)

 LoadTestTool should grant READ permission for the users that are given READ 
 access for specific cells
 -

 Key: HBASE-11251
 URL: https://issues.apache.org/jira/browse/HBASE-11251
 Project: HBase
  Issue Type: Bug
Affects Versions: 0.98.2
Reporter: ramkrishna.s.vasudevan
Assignee: ramkrishna.s.vasudevan
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11251_0.98.patch, HBASE-11251_trunk.patch


 In 0.98.2 onwards the AccessControlFilter
 {code}
 case CHECK_CELL_FIRST: {
 LOG.info(Am coming here for cell first strategy);
 if (authManager.authorize(user, table, cell, Permission.Action.READ) 
 
 authManager.authorize(user, table, family, qualifier, 
 Permission.Action.READ)) {
   LOG.info(Returning include);
   return ReturnCode.INCLUDE;
 }
 {code}
 expects a READ permission on the table for those Users that are granted READ 
 permission on the cell level.
 In 0.98.1
 {code}
 if (authManager.authorize(user, table, cell, cellFirstStrategy, 
 Permission.Action.READ)) {
   return ReturnCode.INCLUDE;
 }
 {code}
 So from 0.98.2 onwards IntegrationTestIngestWithACL was failing.  Hence this 
 JIRA is targeted to correct the behaviour and make the IT work again.



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[jira] [Updated] (HBASE-11251) LoadTestTool should grant READ permission for the users that are given READ access for specific cells

2014-05-25 Thread ramkrishna.s.vasudevan (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11251?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

ramkrishna.s.vasudevan updated HBASE-11251:
---

Attachment: HBASE-11251_trunk.patch

 LoadTestTool should grant READ permission for the users that are given READ 
 access for specific cells
 -

 Key: HBASE-11251
 URL: https://issues.apache.org/jira/browse/HBASE-11251
 Project: HBase
  Issue Type: Bug
Affects Versions: 0.98.2
Reporter: ramkrishna.s.vasudevan
Assignee: ramkrishna.s.vasudevan
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11251_0.98.patch, HBASE-11251_trunk.patch


 In 0.98.2 onwards the AccessControlFilter
 {code}
 case CHECK_CELL_FIRST: {
 LOG.info(Am coming here for cell first strategy);
 if (authManager.authorize(user, table, cell, Permission.Action.READ) 
 
 authManager.authorize(user, table, family, qualifier, 
 Permission.Action.READ)) {
   LOG.info(Returning include);
   return ReturnCode.INCLUDE;
 }
 {code}
 expects a READ permission on the table for those Users that are granted READ 
 permission on the cell level.
 In 0.98.1
 {code}
 if (authManager.authorize(user, table, cell, cellFirstStrategy, 
 Permission.Action.READ)) {
   return ReturnCode.INCLUDE;
 }
 {code}
 So from 0.98.2 onwards IntegrationTestIngestWithACL was failing.  Hence this 
 JIRA is targeted to correct the behaviour and make the IT work again.



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[jira] [Updated] (HBASE-11251) LoadTestTool should grant READ permission for the users that are given READ access for specific cells

2014-05-25 Thread ramkrishna.s.vasudevan (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11251?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

ramkrishna.s.vasudevan updated HBASE-11251:
---

Attachment: HBASE-11251_0.98.patch

 LoadTestTool should grant READ permission for the users that are given READ 
 access for specific cells
 -

 Key: HBASE-11251
 URL: https://issues.apache.org/jira/browse/HBASE-11251
 Project: HBase
  Issue Type: Bug
Affects Versions: 0.98.2
Reporter: ramkrishna.s.vasudevan
Assignee: ramkrishna.s.vasudevan
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11251_0.98.patch, HBASE-11251_trunk.patch


 In 0.98.2 onwards the AccessControlFilter
 {code}
 case CHECK_CELL_FIRST: {
 LOG.info(Am coming here for cell first strategy);
 if (authManager.authorize(user, table, cell, Permission.Action.READ) 
 
 authManager.authorize(user, table, family, qualifier, 
 Permission.Action.READ)) {
   LOG.info(Returning include);
   return ReturnCode.INCLUDE;
 }
 {code}
 expects a READ permission on the table for those Users that are granted READ 
 permission on the cell level.
 In 0.98.1
 {code}
 if (authManager.authorize(user, table, cell, cellFirstStrategy, 
 Permission.Action.READ)) {
   return ReturnCode.INCLUDE;
 }
 {code}
 So from 0.98.2 onwards IntegrationTestIngestWithACL was failing.  Hence this 
 JIRA is targeted to correct the behaviour and make the IT work again.



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[jira] [Commented] (HBASE-11251) LoadTestTool should grant READ permission for the users that are given READ access for specific cells

2014-05-25 Thread Andrew Purtell (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11251?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008574#comment-14008574
 ] 

Andrew Purtell commented on HBASE-11251:


+1

This change was made so the cell first strategy (which is not the default) can 
be useful for the use case it is intended for - denying/overriding access. The 
cell ACL IT was not working at the time so it was missed. 

 LoadTestTool should grant READ permission for the users that are given READ 
 access for specific cells
 -

 Key: HBASE-11251
 URL: https://issues.apache.org/jira/browse/HBASE-11251
 Project: HBase
  Issue Type: Bug
Affects Versions: 0.98.2
Reporter: ramkrishna.s.vasudevan
Assignee: ramkrishna.s.vasudevan
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11251_0.98.patch, HBASE-11251_trunk.patch


 In 0.98.2 onwards the AccessControlFilter
 {code}
 case CHECK_CELL_FIRST: {
 LOG.info(Am coming here for cell first strategy);
 if (authManager.authorize(user, table, cell, Permission.Action.READ) 
 
 authManager.authorize(user, table, family, qualifier, 
 Permission.Action.READ)) {
   LOG.info(Returning include);
   return ReturnCode.INCLUDE;
 }
 {code}
 expects a READ permission on the table for those Users that are granted READ 
 permission on the cell level.
 In 0.98.1
 {code}
 if (authManager.authorize(user, table, cell, cellFirstStrategy, 
 Permission.Action.READ)) {
   return ReturnCode.INCLUDE;
 }
 {code}
 So from 0.98.2 onwards IntegrationTestIngestWithACL was failing.  Hence this 
 JIRA is targeted to correct the behaviour and make the IT work again.



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[jira] [Updated] (HBASE-11234) FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong result

2014-05-25 Thread Andrew Purtell (JIRA)

 [ 
https://issues.apache.org/jira/browse/HBASE-11234?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
 ]

Andrew Purtell updated HBASE-11234:
---

Fix Version/s: (was: 0.98.4)
   0.98.3

 FastDiffDeltaEncoder#getFirstKeyInBlock returns wrong result
 

 Key: HBASE-11234
 URL: https://issues.apache.org/jira/browse/HBASE-11234
 Project: HBase
  Issue Type: Bug
Reporter: chunhui shen
Assignee: chunhui shen
Priority: Critical
 Fix For: 0.99.0, 0.96.3, 0.98.3, 0.94.21

 Attachments: 11234-94.patch, 11234-96.patch, 
 11234-98-with-prefix-tree.txt, 11234-trunk.addendum, HBASE-11234.patch


 As Ted found, 
 With this change:
 {noformat}
 Index: 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
 ===
 --- 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
(revision 1596579)
 +++ 
 hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestReversibleScanners.java
(working copy)
 @@ -51,6 +51,7 @@
  import org.apache.hadoop.hbase.filter.FilterList.Operator;
  import org.apache.hadoop.hbase.filter.PageFilter;
  import org.apache.hadoop.hbase.filter.SingleColumnValueFilter;
 +import org.apache.hadoop.hbase.io.encoding.DataBlockEncoding;
  import org.apache.hadoop.hbase.io.hfile.CacheConfig;
  import org.apache.hadoop.hbase.io.hfile.HFileContext;
  import org.apache.hadoop.hbase.io.hfile.HFileContextBuilder;
 @@ -90,6 +91,7 @@
  CacheConfig cacheConf = new CacheConfig(TEST_UTIL.getConfiguration());
  HFileContextBuilder hcBuilder = new HFileContextBuilder();
  hcBuilder.withBlockSize(2 * 1024);
 +hcBuilder.withDataBlockEncoding(DataBlockEncoding.FAST_DIFF);
  HFileContext hFileContext = hcBuilder.build();
  StoreFile.Writer writer = new StoreFile.WriterBuilder(
  TEST_UTIL.getConfiguration(), cacheConf, fs).withOutputDir(
 {noformat}
 I got:
 java.lang.AssertionError: 
 expected:testRow0197/testCf:testQual/1400712260004/Put/vlen=13/mvcc=5 
 but was:testRow0198/testCf:testQual/1400712260004/   Put/vlen=13/mvcc=0
   at org.junit.Assert.fail(Assert.java:88)
   at org.junit.Assert.failNotEquals(Assert.java:743)
   at org.junit.Assert.assertEquals(Assert.java:118)
   at org.junit.Assert.assertEquals(Assert.java:144)
   at 
 org.apache.hadoop.hbase.regionserver.TestReversibleScanners.seekTestOfReversibleKeyValueScanner(TestReversibleScanners.java:533)
   at 
 org.apache.hadoop.hbase.regionserver.TestReversibleScanners.testReversibleStoreFileScanner(TestReversibleScanners.java:108)
 After debugging, it seems the method of 
 FastDiffDeltaEncoder#getFirstKeyInBlock become broken. And it will cause 
 hfilescanner#seekBefore returns wrong result.
 The solution is simple, see the patch.



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[jira] [Commented] (HBASE-11251) LoadTestTool should grant READ permission for the users that are given READ access for specific cells

2014-05-25 Thread Anoop Sam John (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11251?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008594#comment-14008594
 ] 

Anoop Sam John commented on HBASE-11251:


+  HTable table = new HTable(conf, tableName);

The table is just used to get the tabelName which we already have.  We can 
avoid this HTable creation and so the close in finally.  This is there in 2 
places in the patch.
{code}
-AccessControlClient.grant(conf, tableName, userOwner.getShortName(), 
COLUMN_FAMILY,
+try {
+  AccessControlClient.grant(conf, table.getName(), 
userOwner.getShortName(), null,
{code}
Any reason why the specific CF grant is changed in this patch?

 LoadTestTool should grant READ permission for the users that are given READ 
 access for specific cells
 -

 Key: HBASE-11251
 URL: https://issues.apache.org/jira/browse/HBASE-11251
 Project: HBase
  Issue Type: Bug
Affects Versions: 0.98.2
Reporter: ramkrishna.s.vasudevan
Assignee: ramkrishna.s.vasudevan
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11251_0.98.patch, HBASE-11251_trunk.patch


 In 0.98.2 onwards the AccessControlFilter
 {code}
 case CHECK_CELL_FIRST: {
 LOG.info(Am coming here for cell first strategy);
 if (authManager.authorize(user, table, cell, Permission.Action.READ) 
 
 authManager.authorize(user, table, family, qualifier, 
 Permission.Action.READ)) {
   LOG.info(Returning include);
   return ReturnCode.INCLUDE;
 }
 {code}
 expects a READ permission on the table for those Users that are granted READ 
 permission on the cell level.
 In 0.98.1
 {code}
 if (authManager.authorize(user, table, cell, cellFirstStrategy, 
 Permission.Action.READ)) {
   return ReturnCode.INCLUDE;
 }
 {code}
 So from 0.98.2 onwards IntegrationTestIngestWithACL was failing.  Hence this 
 JIRA is targeted to correct the behaviour and make the IT work again.



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[jira] [Commented] (HBASE-11251) LoadTestTool should grant READ permission for the users that are given READ access for specific cells

2014-05-25 Thread ramkrishna.s.vasudevan (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-11251?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14008596#comment-14008596
 ] 

ramkrishna.s.vasudevan commented on HBASE-11251:


bq.Any reason why the specific CF grant is changed in this patch?
CF grant permission is not needed here.  It was done previously.  But while 
testing I found specifically we need not grant permission on the CF level.  
Also there is only one CF in the test.
bq.The table is just used to get the tabelName which we already have. We can 
avoid this HTable creation and so the close in finally. This is there in 2 
places in the patch.
Ok.  I just ensured the close had to be done which was not done in the existing 
code.

 LoadTestTool should grant READ permission for the users that are given READ 
 access for specific cells
 -

 Key: HBASE-11251
 URL: https://issues.apache.org/jira/browse/HBASE-11251
 Project: HBase
  Issue Type: Bug
Affects Versions: 0.98.2
Reporter: ramkrishna.s.vasudevan
Assignee: ramkrishna.s.vasudevan
 Fix For: 0.99.0, 0.98.3

 Attachments: HBASE-11251_0.98.patch, HBASE-11251_trunk.patch


 In 0.98.2 onwards the AccessControlFilter
 {code}
 case CHECK_CELL_FIRST: {
 LOG.info(Am coming here for cell first strategy);
 if (authManager.authorize(user, table, cell, Permission.Action.READ) 
 
 authManager.authorize(user, table, family, qualifier, 
 Permission.Action.READ)) {
   LOG.info(Returning include);
   return ReturnCode.INCLUDE;
 }
 {code}
 expects a READ permission on the table for those Users that are granted READ 
 permission on the cell level.
 In 0.98.1
 {code}
 if (authManager.authorize(user, table, cell, cellFirstStrategy, 
 Permission.Action.READ)) {
   return ReturnCode.INCLUDE;
 }
 {code}
 So from 0.98.2 onwards IntegrationTestIngestWithACL was failing.  Hence this 
 JIRA is targeted to correct the behaviour and make the IT work again.



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