Re: [Jmol-users] JSmol Question

2013-01-24 Thread Robert Hanson
On Thu, Jan 24, 2013 at 2:27 PM, Otis Rothenberger wrote:

> You might be right, but I think it's more subtle than that. From what I
> read, iPad Safari actually sends a hover event. You see it when you touch a
> link and hold for a second rather than click (a quick tap). The hold
> selects the link and brings up a hover box, albeit not the link title
> hover. I haven't tried it, but I bet a :hover style would override Safari's
> hover box to bring up your own hover hint. It's not just links. Hovering
> (touch hold) page html containers selects them and brings up a copy box.
>

I'm pretty sure "touch and hold" fires "double-click". That's certainly a
configuration option in Windows 8.



>
> So in the case of bond selection, I really think it's a touch followed by
> a tap. The bond hover circles do not display, so I make the model go
> translucent for a second to reinforce proper bond selection.
>
> At first, I put this all in the fun challenge category, but I must admit
> that I'm pleasantly surprised to find how well JSmol behaves on
> Safari/iPad. IPad/Chrome on the other hand is useless.
>
> iPad aside, I can't believe how easy it was to bring most of our virtual
> model kit functionality from Jmol applet to JSmol.
>
>
Yes. It does seem that the small molecular problem is solved -- the iPad
has the power to do it, and the entire set of Jmol commands is now
implemented. There is the issue of the 3 Mb download, but that's about it.
I don't see that as a make-it-or-break it issue.

Now that I have my hands on an iPad for a few days, I'm going to be doing
some speed testing to see just what it is Safari on the iPad does so
poorly. I find it hard to believe this is a processor issue. I suspect it's
a JavaScript optimization issue.


Bob


> Otis
>
>
> --
> Otis Rothenberger
> o...@chemagic.com
> http://chemagic.com
>
>
>
>
> On Jan 24, 2013, at 12:50 AM, Robert Hanson wrote:
>
> isn't that called a "double-click"? :)
>
>
> On Wed, Jan 23, 2013 at 9:56 PM, Otis Rothenberger 
> wrote:
>
>> Bob,
>>
>> OK, finally. I was screwing up with missing quotes on the bind. I had
>> them in what I pasted below, but they were missing in my code.
>>
>> You can conformation rotate about a bond on an iPad. The hover on the
>> bond is a bit tricky, but there's a learnable rhythm involved -
>> touch/up/touch/up. It works pretty well with a stylus. What fun.
>>
>> Otis
>>
>> --
>> Otis Rothenberger
>> o...@chemagic.com
>> http://chemagic.com
>>
>>
>>
>>
>> On Jan 23, 2013, at 4:15 PM, Robert Hanson wrote:
>>
>> you can certainly use
>>
>> UNBIND LEFT
>>
>> to unbind LEFT-CLICK.
>>
>>
>>
>>
>> On Wed, Jan 23, 2013 at 7:34 AM, Otis Rothenberger > > wrote:
>>
>>> Bob,
>>>
>>> I've discovered that iPad actually has a hover that allows me to select
>>> a bond in JSmol prior to a conformation rotation. So this hover/click
>>> movement sets me up for conformation. I'm currently using the following
>>> binding for this:
>>>
>>> bind "CTRL-LEFT" "select WITHIN(BRANCH,{atomno=rot1}, {atomno=rot2}); if
>>> (_X < 250){select WITHIN(BRANCH,{atomno=rot2}, {atomno=rot1});}
>>> rotateSelected {atomno=rot1} {atomno=rot2} @{_DELTAY*.5}
>>>
>>> The rot1 and rot2 are set up by the bond selection. The 250 is my half
>>> my JSmol window width.
>>>
>>> The above binding (CTRL-LEFT) is useless on an iPad. Is there any way to
>>> temporarily unbind "LEFT" alone so that it can be bound to the above
>>> script? If not, do any other touch executions of the above come to mind?
>>>
>>> I'm assuming above that "LEFT" alone would equate to touch-drag on the
>>> iPad.
>>>
>>> Otis
>>>
>>> --
>>> Otis Rothenberger
>>> o...@chemagic.com
>>> http://chemagic.com
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>> --
>>> Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS,
>>> MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
>>> with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft
>>> MVPs and experts. ON SALE this month only -- learn more at:
>>> http://p.sf.net/sfu/learnnow-d2d
>>> ___
>>> Jmol-users mailing list
>>> Jmol-users@lists.sourceforge.net
>>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>>>
>>
>>
>>
>> --
>> Robert M. Hanson
>> Larson-Anderson Professor of Chemistry
>> Chair, Chemistry Department
>> St. Olaf College
>> Northfield, MN
>> http://www.stolaf.edu/people/hansonr
>>
>>
>> If nature does not answer first what we want,
>> it is better to take what answer we get.
>>
>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>
>> --
>> Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS,
>> MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
>> with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft
>> MVPs and experts. ON SALE this month only -- learn

Re: [Jmol-users] JSmol Question

2013-01-24 Thread Otis Rothenberger
You might be right, but I think it's more subtle than that. From what I read, 
iPad Safari actually sends a hover event. You see it when you touch a link and 
hold for a second rather than click (a quick tap). The hold selects the link 
and brings up a hover box, albeit not the link title hover. I haven't tried it, 
but I bet a :hover style would override Safari's hover box to bring up your own 
hover hint. It's not just links. Hovering (touch hold) page html containers 
selects them and brings up a copy box.

So in the case of bond selection, I really think it's a touch followed by a 
tap. The bond hover circles do not display, so I make the model go translucent 
for a second to reinforce proper bond selection.

At first, I put this all in the fun challenge category, but I must admit that 
I'm pleasantly surprised to find how well JSmol behaves on Safari/iPad. 
IPad/Chrome on the other hand is useless.

iPad aside, I can't believe how easy it was to bring most of our virtual model 
kit functionality from Jmol applet to JSmol.

Otis


--
Otis Rothenberger
o...@chemagic.com
http://chemagic.com




On Jan 24, 2013, at 12:50 AM, Robert Hanson wrote:

> isn't that called a "double-click"? :)
> 
> 
> On Wed, Jan 23, 2013 at 9:56 PM, Otis Rothenberger  
> wrote:
> Bob,
> 
> OK, finally. I was screwing up with missing quotes on the bind. I had them in 
> what I pasted below, but they were missing in my code.
> 
> You can conformation rotate about a bond on an iPad. The hover on the bond is 
> a bit tricky, but there's a learnable rhythm involved - touch/up/touch/up. It 
> works pretty well with a stylus. What fun.
> 
> Otis
> 
> --
> Otis Rothenberger
> o...@chemagic.com
> http://chemagic.com
> 
> 
> 
> 
> On Jan 23, 2013, at 4:15 PM, Robert Hanson wrote:
> 
>> you can certainly use
>> 
>> UNBIND LEFT
>> 
>> to unbind LEFT-CLICK. 
>> 
>> 
>> 
>> 
>> On Wed, Jan 23, 2013 at 7:34 AM, Otis Rothenberger  
>> wrote:
>> Bob,
>> 
>> I've discovered that iPad actually has a hover that allows me to select a 
>> bond in JSmol prior to a conformation rotation. So this hover/click movement 
>> sets me up for conformation. I'm currently using the following binding for 
>> this:
>> 
>> bind "CTRL-LEFT" "select WITHIN(BRANCH,{atomno=rot1}, {atomno=rot2}); if (_X 
>> < 250){select WITHIN(BRANCH,{atomno=rot2}, {atomno=rot1});} rotateSelected 
>> {atomno=rot1} {atomno=rot2} @{_DELTAY*.5}
>> 
>> The rot1 and rot2 are set up by the bond selection. The 250 is my half my 
>> JSmol window width.
>> 
>> The above binding (CTRL-LEFT) is useless on an iPad. Is there any way to 
>> temporarily unbind "LEFT" alone so that it can be bound to the above script? 
>> If not, do any other touch executions of the above come to mind?
>> 
>> I'm assuming above that "LEFT" alone would equate to touch-drag on the iPad.
>> 
>> Otis
>> 
>> --
>> Otis Rothenberger
>> o...@chemagic.com
>> http://chemagic.com
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> --
>> Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS,
>> MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
>> with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft
>> MVPs and experts. ON SALE this month only -- learn more at:
>> http://p.sf.net/sfu/learnnow-d2d
>> ___
>> Jmol-users mailing list
>> Jmol-users@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>> 
>> 
>> 
>> -- 
>> Robert M. Hanson
>> Larson-Anderson Professor of Chemistry
>> Chair, Chemistry Department
>> St. Olaf College
>> Northfield, MN
>> http://www.stolaf.edu/people/hansonr
>> 
>> 
>> If nature does not answer first what we want,
>> it is better to take what answer we get. 
>> 
>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>> 
>> --
>> Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS,
>> MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
>> with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft
>> MVPs and experts. ON SALE this month only -- learn more at:
>> http://p.sf.net/sfu/learnnow-d2d___
>> Jmol-users mailing list
>> Jmol-users@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/jmol-users
> 
> 
> --
> Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS,
> MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
> with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft
> MVPs and experts. ON SALE this month only -- learn more at:
> http://p.sf.net/sfu/learnnow-d2d
> ___
> Jmol-users mailing list
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> https://lists.sourceforge.net/lists/listinfo

Re: [Jmol-users] JSmol Question

2013-01-23 Thread Robert Hanson
isn't that called a "double-click"? :)


On Wed, Jan 23, 2013 at 9:56 PM, Otis Rothenberger wrote:

> Bob,
>
> OK, finally. I was screwing up with missing quotes on the bind. I had them
> in what I pasted below, but they were missing in my code.
>
> You can conformation rotate about a bond on an iPad. The hover on the bond
> is a bit tricky, but there's a learnable rhythm involved -
> touch/up/touch/up. It works pretty well with a stylus. What fun.
>
> Otis
>
> --
> Otis Rothenberger
> o...@chemagic.com
> http://chemagic.com
>
>
>
>
> On Jan 23, 2013, at 4:15 PM, Robert Hanson wrote:
>
> you can certainly use
>
> UNBIND LEFT
>
> to unbind LEFT-CLICK.
>
>
>
>
> On Wed, Jan 23, 2013 at 7:34 AM, Otis Rothenberger 
> wrote:
>
>> Bob,
>>
>> I've discovered that iPad actually has a hover that allows me to select a
>> bond in JSmol prior to a conformation rotation. So this hover/click
>> movement sets me up for conformation. I'm currently using the following
>> binding for this:
>>
>> bind "CTRL-LEFT" "select WITHIN(BRANCH,{atomno=rot1}, {atomno=rot2}); if
>> (_X < 250){select WITHIN(BRANCH,{atomno=rot2}, {atomno=rot1});}
>> rotateSelected {atomno=rot1} {atomno=rot2} @{_DELTAY*.5}
>>
>> The rot1 and rot2 are set up by the bond selection. The 250 is my half my
>> JSmol window width.
>>
>> The above binding (CTRL-LEFT) is useless on an iPad. Is there any way to
>> temporarily unbind "LEFT" alone so that it can be bound to the above
>> script? If not, do any other touch executions of the above come to mind?
>>
>> I'm assuming above that "LEFT" alone would equate to touch-drag on the
>> iPad.
>>
>> Otis
>>
>> --
>> Otis Rothenberger
>> o...@chemagic.com
>> http://chemagic.com
>>
>>
>>
>>
>>
>>
>>
>>
>> --
>> Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS,
>> MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
>> with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft
>> MVPs and experts. ON SALE this month only -- learn more at:
>> http://p.sf.net/sfu/learnnow-d2d
>> ___
>> Jmol-users mailing list
>> Jmol-users@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/jmol-users
>>
>
>
>
> --
> Robert M. Hanson
> Larson-Anderson Professor of Chemistry
> Chair, Chemistry Department
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
> --
> Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS,
> MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
> with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft
> MVPs and experts. ON SALE this month only -- learn more at:
>
> http://p.sf.net/sfu/learnnow-d2d___
> Jmol-users mailing list
> Jmol-users@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/jmol-users
>
>
>
>
> --
> Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS,
> MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
> with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft
> MVPs and experts. ON SALE this month only -- learn more at:
> http://p.sf.net/sfu/learnnow-d2d
> ___
> Jmol-users mailing list
> Jmol-users@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/jmol-users
>
>


-- 
Robert M. Hanson
Larson-Anderson Professor of Chemistry
Chair, Chemistry Department
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
--
Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS,
MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft
MVPs and experts. ON SALE this month only -- learn more at:
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Re: [Jmol-users] JSmol Question

2013-01-23 Thread Otis Rothenberger
Bob,

OK, finally. I was screwing up with missing quotes on the bind. I had them in 
what I pasted below, but they were missing in my code.

You can conformation rotate about a bond on an iPad. The hover on the bond is a 
bit tricky, but there's a learnable rhythm involved - touch/up/touch/up. It 
works pretty well with a stylus. What fun.

Otis

--
Otis Rothenberger
o...@chemagic.com
http://chemagic.com




On Jan 23, 2013, at 4:15 PM, Robert Hanson wrote:

> you can certainly use
> 
> UNBIND LEFT
> 
> to unbind LEFT-CLICK. 
> 
> 
> 
> 
> On Wed, Jan 23, 2013 at 7:34 AM, Otis Rothenberger  
> wrote:
> Bob,
> 
> I've discovered that iPad actually has a hover that allows me to select a 
> bond in JSmol prior to a conformation rotation. So this hover/click movement 
> sets me up for conformation. I'm currently using the following binding for 
> this:
> 
> bind "CTRL-LEFT" "select WITHIN(BRANCH,{atomno=rot1}, {atomno=rot2}); if (_X 
> < 250){select WITHIN(BRANCH,{atomno=rot2}, {atomno=rot1});} rotateSelected 
> {atomno=rot1} {atomno=rot2} @{_DELTAY*.5}
> 
> The rot1 and rot2 are set up by the bond selection. The 250 is my half my 
> JSmol window width.
> 
> The above binding (CTRL-LEFT) is useless on an iPad. Is there any way to 
> temporarily unbind "LEFT" alone so that it can be bound to the above script? 
> If not, do any other touch executions of the above come to mind?
> 
> I'm assuming above that "LEFT" alone would equate to touch-drag on the iPad.
> 
> Otis
> 
> --
> Otis Rothenberger
> o...@chemagic.com
> http://chemagic.com
> 
> 
> 
> 
> 
> 
> 
> --
> Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS,
> MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
> with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft
> MVPs and experts. ON SALE this month only -- learn more at:
> http://p.sf.net/sfu/learnnow-d2d
> ___
> Jmol-users mailing list
> Jmol-users@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/jmol-users
> 
> 
> 
> -- 
> Robert M. Hanson
> Larson-Anderson Professor of Chemistry
> Chair, Chemistry Department
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
> 
> 
> If nature does not answer first what we want,
> it is better to take what answer we get. 
> 
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
> 
> --
> Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS,
> MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
> with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft
> MVPs and experts. ON SALE this month only -- learn more at:
> http://p.sf.net/sfu/learnnow-d2d___
> Jmol-users mailing list
> Jmol-users@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/jmol-users

--
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MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
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MVPs and experts. ON SALE this month only -- learn more at:
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Re: [Jmol-users] JSmol Question

2013-01-23 Thread Robert Hanson
you can certainly use

UNBIND LEFT

to unbind LEFT-CLICK.




On Wed, Jan 23, 2013 at 7:34 AM, Otis Rothenberger wrote:

> Bob,
>
> I've discovered that iPad actually has a hover that allows me to select a
> bond in JSmol prior to a conformation rotation. So this hover/click
> movement sets me up for conformation. I'm currently using the following
> binding for this:
>
> bind "CTRL-LEFT" "select WITHIN(BRANCH,{atomno=rot1}, {atomno=rot2}); if
> (_X < 250){select WITHIN(BRANCH,{atomno=rot2}, {atomno=rot1});}
> rotateSelected {atomno=rot1} {atomno=rot2} @{_DELTAY*.5}
>
> The rot1 and rot2 are set up by the bond selection. The 250 is my half my
> JSmol window width.
>
> The above binding (CTRL-LEFT) is useless on an iPad. Is there any way to
> temporarily unbind "LEFT" alone so that it can be bound to the above
> script? If not, do any other touch executions of the above come to mind?
>
> I'm assuming above that "LEFT" alone would equate to touch-drag on the
> iPad.
>
> Otis
>
> --
> Otis Rothenberger
> o...@chemagic.com
> http://chemagic.com
>
>
>
>
>
>
>
>
> --
> Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS,
> MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
> with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft
> MVPs and experts. ON SALE this month only -- learn more at:
> http://p.sf.net/sfu/learnnow-d2d
> ___
> Jmol-users mailing list
> Jmol-users@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/jmol-users
>



-- 
Robert M. Hanson
Larson-Anderson Professor of Chemistry
Chair, Chemistry Department
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
--
Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS,
MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current
with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft
MVPs and experts. ON SALE this month only -- learn more at:
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Re: [Jmol-users] JSmol Question

2012-11-14 Thread Robert Hanson
also, if you use script commands, it probably waits anyway. There's only
one thread, and all files are loaded synchronously. So it's not like Jmol,
where you don't know if it is done yet.



On Wed, Nov 14, 2012 at 2:47 PM, Otis Rothenberger wrote:

> Bob,
>
> If I am directing the page load toward HTML5 only, do I have any inherent
> JavaScript "model loaded" notice (variable) available?
>
> Otis
>
> --
> Otis Rothenberger
> o...@chemagic.com
> http://chemagic.com
>
>
>
>
>
>
> --
> Monitor your physical, virtual and cloud infrastructure from a single
> web console. Get in-depth insight into apps, servers, databases, vmware,
> SAP, cloud infrastructure, etc. Download 30-day Free Trial.
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> ___
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> https://lists.sourceforge.net/lists/listinfo/jmol-users
>
>


-- 
Robert M. Hanson
Larson-Anderson Professor of Chemistry
Chair, Chemistry Department
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
--
Monitor your physical, virtual and cloud infrastructure from a single
web console. Get in-depth insight into apps, servers, databases, vmware,
SAP, cloud infrastructure, etc. Download 30-day Free Trial.
Pricing starts from $795 for 25 servers or applications!
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Re: [Jmol-users] JSmol Question

2012-11-14 Thread Robert Hanson
you have all the normal callback methods.


On Wed, Nov 14, 2012 at 2:47 PM, Otis Rothenberger wrote:

> Bob,
>
> If I am directing the page load toward HTML5 only, do I have any inherent
> JavaScript "model loaded" notice (variable) available?
>
> Otis
>
> --
> Otis Rothenberger
> o...@chemagic.com
> http://chemagic.com
>
>
>
>
>
>
> --
> Monitor your physical, virtual and cloud infrastructure from a single
> web console. Get in-depth insight into apps, servers, databases, vmware,
> SAP, cloud infrastructure, etc. Download 30-day Free Trial.
> Pricing starts from $795 for 25 servers or applications!
> http://p.sf.net/sfu/zoho_dev2dev_nov
> ___
> Jmol-users mailing list
> Jmol-users@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/jmol-users
>
>


-- 
Robert M. Hanson
Larson-Anderson Professor of Chemistry
Chair, Chemistry Department
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
--
Monitor your physical, virtual and cloud infrastructure from a single
web console. Get in-depth insight into apps, servers, databases, vmware,
SAP, cloud infrastructure, etc. Download 30-day Free Trial.
Pricing starts from $795 for 25 servers or applications!
http://p.sf.net/sfu/zoho_dev2dev_nov___
Jmol-users mailing list
Jmol-users@lists.sourceforge.net
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