Re: The current status of git-annex
On Sun, Apr 19, 2015 at 4:11 PM, Ryan Schmidt ryandes...@macports.org wrote: On Apr 19, 2015, at 4:09 PM, Peng Yu pengyu...@gmail.com wrote: I am not sure how to try a portfile. I just know to use `port install` to install packages. These instructions are supposed to help with that: https://guide.macports.org/#development.local-repositories Can this be made simpler by just typing one command in the future? If they don't work let us know. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Re: [Haskell-beginners] Error when running `cabal install cabal-install`
Indeed, I uninstalled libiconv by running the following command. sudo port uninstall --follow-dependents libiconv Then, `cabal install cabal-install` runs without a problem. Hi MacPorts Users, Is there better solution to this problem? Please see the original question regarding the conflict of MacPorts and Haskell. (I don't what to use haskell from MacPorts as I want to keep updated with the latest version of Haskell.) https://mail.haskell.org/pipermail/beginners/2015-April/015214.html On Thu, Apr 23, 2015 at 3:34 PM, Brandon Allbery allber...@gmail.com wrote: On Thu, Apr 23, 2015 at 4:19 PM, Peng Yu pengyu...@gmail.com wrote: It is installed from https://www.haskell.org/platform/ . The OS is Mac OS X. Yes, as I suspected. The problem is that Apple ships an old version of the iconv library; MacPorts and Homebrew generally install a newer, incompatible one with symbols renamed to trigger that link error (because otherwise you find out about the mismatch when the first iconv call dumps core at runtime). You will need to arrange for ghc not to see that other iconv, only Apple's, since it won't work with any but Apple's. Or use a ghc from whichever package manager you have installed, so that it works with that package manager's iconv library. (This is more likely to happen with Homebrew, since most things don't look /opt/local but just about everything looks under /usr/local.) -- brandon s allbery kf8nh sine nomine associates allber...@gmail.com ballb...@sinenomine.net unix, openafs, kerberos, infrastructure, xmonadhttp://sinenomine.net ___ Beginners mailing list beginn...@haskell.org http://mail.haskell.org/cgi-bin/mailman/listinfo/beginners -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Re: [Haskell-beginners] Error when running `cabal install cabal-install`
On Thu, Apr 23, 2015 at 7:39 PM, Ryan Schmidt ryandes...@macports.org wrote:
On Apr 23, 2015, at 7:23 PM, Peng Yu pengyu...@gmail.com wrote:
Long story short: Try
$ cabal install --extra-include-dirs=/opt/local/include
--extra-lib-dirs=/opt/local/lib
I tried it but it still shows the error messages.
~$ cabal install --extra-include-dirs=/opt/local/include
--extra-lib-dirs=/opt/local/lib cabal-install
Resolving dependencies...
Configuring cabal-install-1.22.3.0...
Failed to install cabal-install-1.22.3.0
Build log ( /Users/py/.cabal/logs/cabal-install-1.22.3.0.log ):
cabal: Error: some packages failed to install:
cabal-install-1.22.3.0 failed during the configure step. The exception was:
user error ('/usr/bin/ghc' exited with an error:
You've installed ghc into /usr/bin? That's probably not a good idea. Prefix
/usr is only for the OS vendor to install software into.
This is what installed from the haskell installer. I agree this might
not be a good idea. But I have no control over it.
--
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Peng
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Re: [Haskell-beginners] Error when running `cabal install cabal-install`
Long story short: Try
$ cabal install --extra-include-dirs=/opt/local/include
--extra-lib-dirs=/opt/local/lib
I tried it but it still shows the error messages.
~$ cabal install --extra-include-dirs=/opt/local/include
--extra-lib-dirs=/opt/local/lib cabal-install
Resolving dependencies...
Configuring cabal-install-1.22.3.0...
Failed to install cabal-install-1.22.3.0
Build log ( /Users/py/.cabal/logs/cabal-install-1.22.3.0.log ):
cabal: Error: some packages failed to install:
cabal-install-1.22.3.0 failed during the configure step. The exception was:
user error ('/usr/bin/ghc' exited with an error:
Undefined symbols for architecture x86_64:
_iconv, referenced from:
_hs_iconv in libHSbase-4.7.0.1.a(iconv.o)
(maybe you meant: _hs_iconv,
_base_GHCziIOziEncodingziIconv_iconvEncodingzuloc_info ,
_base_GHCziIOziEncodingziIconv_iconvEncoding8_info ,
_base_GHCziIOziEncodingziIconv_iconvEncoding9_closure , _hs_iconv_open ,
_base_GHCziIOziEncodingziIconv_iconvEncodingzuloc1_closure , _hs_iconv_close ,
_base_GHCziIOziEncodingziIconv_iconvEncoding6_info ,
_base_GHCziIOziEncodingziIconv_iconvEncoding4_closure ,
_base_GHCziIOziEncodingziIconv_iconvEncoding6_closure ,
_base_GHCziIOziEncodingziIconv_iconvEncoding10_closure ,
_base_GHCziIOziEncodingziIconv_iconvEncoding7_info ,
_base_GHCziIOziEncodingziIconv_iconvEncoding2_closure ,
_base_GHCziIOziEncodingziIconv_iconvEncoding2_info ,
_base_GHCziIOziEncodingziIconv_iconvEncodingzuloc_closure ,
_base_GHCziIOziEncodingziIconv_iconvEncoding3_info ,
_base_GHCziIOziEncodingziIconv_iconvEncoding10_info ,
_base_GHCziIOziEncodingziIconv_iconvEncoding9_info ,
_base_GHCziIOziEncodingziIconv_iconvEncoding8_closure ,
_base_GHCziIOziEncodingziIconv_iconvEncoding7_closure ,
_base_GHCziIOziEncodingziIconv_iconvEncodingzuloc1_info ,
_base_GHCziIOziEncodingziIconv_iconvEncoding3_closure )
_iconv_close, referenced from:
_hs_iconv_close in libHSbase-4.7.0.1.a(iconv.o)
(maybe you meant: _hs_iconv_close)
_iconv_open, referenced from:
_hs_iconv_open in libHSbase-4.7.0.1.a(iconv.o)
(maybe you meant: _hs_iconv_open)
_locale_charset, referenced from:
_localeEncoding in libHSbase-4.7.0.1.a(PrelIOUtils.o)
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see
invocation)
)
--
Regards,
Peng
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The current status of git-annex
Hi, I notice this. But it seems that git-annex is still not available. What is currently the best way to install git-annex on Mac OS X (w/o home brew). https://trac.macports.org/ticket/41466 -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Re: The current status of git-annex
I am not sure how to try a portfile. I just know to use `port install` to install packages. On Sun, Apr 19, 2015 at 2:38 PM, Ryan Schmidt ryandes...@macports.org wrote: On Apr 19, 2015, at 8:52 AM, Peng Yu wrote: I notice this. But it seems that git-annex is still not available. What is currently the best way to install git-annex on Mac OS X (w/o home brew). https://trac.macports.org/ticket/41466 Leo attached a portfile to that ticket 11 days ago. Did you try it? If it doesn't work for you, what problem did you encounter? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Am I supposed to use gem from MacPorts to install ruby packages in /opt/local/lib/ruby2.2/gems/2.2.0?
Hi, If I use gem to install ruby packages, they will be installed in /opt/local/lib/ruby2.2/gems/2.2.0 by default. But I guess ruby packages installed by MacPorts will also use this directory. So this may cause some problem, is it so? If so, what is the recommended way to install ruby packages via gem? Thanks. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Where are the manpages for llvm?
I have llvm installed through MacPorts. But I don't see the manpages. Are they available? Thanks. ~$ ll $(which lli) lrwxr-xr-x 1 root admin 25 2015-01-04 10:38:14 /opt/local/bin/lli - /opt/local/bin/lli-mp-3.4 ~$ ll $(which llc) lrwxr-xr-x 1 root admin 25 2015-01-04 10:38:14 /opt/local/bin/llc - /opt/local/bin/llc-mp-3.4 -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Problem with cssh
Hi, I get the following problem when running cssh. My mac is of version OS X 10.9.5. Does anybody know what the problem is? Thanks. $ cssh machine1 machine2 Can't connect to display `tmp/launch-KZPKti/org.macosforge.xquartz:0': Invalid argument at /opt/local/lib/perl5/vendor_perl/5.16.3/X11/Protocol.pm line 2270. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Where is google-test?
Hi, MacPorts used to have google-test. But it seems not available anymore. Is there a replacement package for it? Thanks. $ sudo port install google-test Error: Port google-test not found -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Find which port a file is from?
Hi, I don't find a command that can show which port a file is from. This function is available in apt-get on ubuntu, I guess similar things should be available on macports. Could anybody let me know if there is a way to do it? Thanks. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Why .gz files are not colored with `ls --color=auto`?
Hi, On ubuntu, `ls --color=auto` colors .gz files. But it (the one from macports) does not .gz files on Mac. Does anybody know how to make it color .gz files as well on mac? Thanks. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
sudo port install gdb problem
Hi,
I see the following error message. Does anybody know what is wrong
with it and how to get it work? Thanks.
~$ sudo port install gdb
--- Cleaning gdb
--- Scanning binaries for linking errors: 100.0%
--- Found 14 broken file(s), matching files to ports
--- Found 1 broken port(s), determining rebuild order
--- Rebuilding in order
arpack @3.1.2 +accelerate+gcc47+openmpi
Error: arpack: Variant openmpi conflicts with gcc47
Error: Unable to open port: Error evaluating variants
Error rebuilding arpack
while executing
error Error rebuilding $portname
(procedure revupgrade_scanandrebuild line 382)
invoked from within
revupgrade_scanandrebuild broken_port_counts $opts
(procedure macports::revupgrade line 5)
invoked from within
macports::revupgrade $opts
(procedure action_revupgrade line 2)
invoked from within
action_revupgrade $action $portlist $opts
(procedure action_target line 96)
invoked from within
$action_proc $action $portlist [array get global_options]
(procedure process_cmd line 93)
invoked from within
process_cmd $remaining_args
invoked from within
if { [llength $remaining_args] 0 } {
# If there are remaining arguments, process those as a command
set exit_status [process_cmd $remaining...
(file /opt/local/bin/port line 4857)
--
Regards,
Peng
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How to compile C++ is_pod?
Hi, http://www.cplusplus.com/reference/type_traits/is_pod/ I'm trying to compile the above code. But I get the following error. Do I use the correct option for gcc-mp-4.7. Or there is some error with my gcc-mp-4.7 installation? Thanks. ~/linux/test/cpp/cpp/library/type_traits/is_pod$ gcc-mp-4.7 -std=c++11 -o main main.cpp Undefined symbols for architecture x86_64: std::basic_ostreamchar, std::char_traitschar ::operator(std::basic_ostreamchar, std::char_traitschar (*)(std::basic_ostreamchar, std::char_traitschar )), referenced from: _main in ccSTl4KA.o std::basic_ostreamchar, std::char_traitschar ::operator(std::ios_base (*)(std::ios_base)), referenced from: _main in ccSTl4KA.o std::basic_ostreamchar, std::char_traitschar ::operator(bool), referenced from: _main in ccSTl4KA.o std::ios_base::Init::Init(), referenced from: __static_initialization_and_destruction_0(int, int) in ccSTl4KA.o std::ios_base::Init::~Init(), referenced from: __static_initialization_and_destruction_0(int, int) in ccSTl4KA.o std::cout, referenced from: _main in ccSTl4KA.o std::basic_ostreamchar, std::char_traitschar std::endlchar, std::char_traitschar (std::basic_ostreamchar, std::char_traitschar ), referenced from: _main in ccSTl4KA.o std::basic_ostreamchar, std::char_traitschar std::operator std::char_traitschar (std::basic_ostreamchar, std::char_traitschar , char const*), referenced from: _main in ccSTl4KA.o ld: symbol(s) not found for architecture x86_64 collect2: error: ld returned 1 exit status -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
What is boost_thread-mt?
Hi, I see the following files. I'm wondering why '-mt' is appended to the file. I don't see such thing on ubuntu. I want to make the compilation of some source code using libboost_thread compatible on both Mac and Ubuntu. Does anybody know how to do it? Thanks. /opt/local/lib/libboost_thread-mt.dylib /opt/local/lib/libboost_thread-mt.a -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
mp-gcc47 problem
Hi, I run the following command. But I got an error for gcc. Does anybody know what is wrong? Thanks. ~$ sudo port select --set gcc mp-gcc47 Selecting 'mp-gcc47' for 'gcc' succeeded. 'mp-gcc47' is now active. ~$ ls -l $(which gcc) lrwxr-xr-x 1 root admin 25 Jun 28 15:09 /opt/local/bin/gcc - /opt/local/bin/gcc-mp-4.7 ~$ gcc --version gcc-mp-4.7: error trying to exec '/opt/local/bin/i686-apple-darwin11-llvm-gcc-4.2': execvp: No such file or directory ~$ g++ --version g++ (MacPorts gcc47 4.7.3_0) 4.7.3 Copyright (C) 2012 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
How to use reduce-algebra?
Hi, I get the following error when I try to run redpsl. Does anybody know what is wrong with it? Thanks. ~$ redpsl Failed to find a version of bpsl that you have built try ./configure --with-psl; make to build one. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
ggv error
Hi, I got the following error when I try to open a ps file. Does anybody know what is wrong? ~/Downloads$ ggv 93-1342.ps Dynamic session lookup supported but failed: launchd did not provide a socket path, verify that org.freedesktop.dbus-session.plist is loaded! Dynamic session lookup supported but failed: launchd did not provide a socket path, verify that org.freedesktop.dbus-session.plist is loaded! Dynamic session lookup supported but failed: launchd did not provide a socket path, verify that org.freedesktop.dbus-session.plist is loaded! Dynamic session lookup supported but failed: launchd did not provide a socket path, verify that org.freedesktop.dbus-session.plist is loaded! Dynamic session lookup supported but failed: launchd did not provide a socket path, verify that org.freedesktop.dbus-session.plist is loaded! Dynamic session lookup supported but failed: launchd did not provide a socket path, verify that org.freedesktop.dbus-session.plist is loaded! Dynamic session lookup supported but failed: launchd did not provide a socket path, verify that org.freedesktop.dbus-session.plist is loaded! Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid Dynamic session lookup supported but failed: Unable to find launchd socket when setuid (ggv:53538): GGV-WARNING **: Could not get GGV control: 'Unknown CORBA exception id: 'IDL:omg.org/CORBA/COMM_FAILURE:1.0'' (ggv:53538): GGV-WARNING **: Failed to create a new window. (ggv:53538): GGV-WARNING **: No windows could be opened. Exiting... -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Re: ggv error
Make sure you've followed the instructions given in the dbus notes. % port notes dbus I've run the commands shown in the output of the above command. But I still get errors. ~/Downloads$ ggv 10.1.1.52.997.ps (ggv:64210): GGV-WARNING **: Could not get GGV control: 'Unknown CORBA exception id: 'IDL:omg.org/CORBA/COMM_FAILURE:1.0'' (ggv:64210): GGV-WARNING **: Failed to create a new window. (ggv:64210): GGV-WARNING **: No windows could be opened. Exiting... -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Where is man octave installed?
Hi, I have octave installed through macports. But I don't find its man page. Does anybody know where it is? ~$ octave --version GNU Octave, version 3.6.4 Copyright (C) 2013 John W. Eaton and others. This is free software; see the source code for copying conditions. There is ABSOLUTELY NO WARRANTY; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Octave was configured for x86_64-apple-darwin12.3.0. Additional information about Octave is available at http://www.octave.org. Please contribute if you find this software useful. For more information, visit http://www.octave.org/get-involved.html Read http://www.octave.org/bugs.html to learn how to submit bug reports. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Re: Where is man octave installed?
You can list the files owned by a port using port contents. % port contents octave I don't find the manpage. Should there be a manpage for octave? ~$ port contents octave-devel | grep 'octave\.[0-9]' /opt/local/lib/octave/3.6.4/liboctave.1.dylib -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
How to revert to the default autoconf?
Hi, I want to temporarily revert to the default autoconf and other tools (e.g., autom4e). Could anybody let me know what is the correct way to revert the default without having to uninstall autoconf from macports? Thanks. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Re: Correct crontab entry for port selfupdate port upgrade outdated
Hi Arno, I see the following error in the log. Where is portsign.sh? What is it for? Thanks. /usr/local/bin/periodic-port.sh: line 43: /usr/local/bin/portsign.sh: No such file or directory On Sat, Apr 27, 2013 at 9:47 PM, Arno Hautala a...@alum.wpi.edu wrote: The basics are that the shell script goes in /usr/local/bin (or anywhere else really, just make sure you edit the plist to point to where the script is). The plist goes in `/Library/LaunchDaemons/`, should be owned by root:admin and have 644 permissions. You can then load the service with: `launchctl load /Library/LaunchDaemons/org.macports.port.selfupdate.plist` and stop the service with unload instead of load. For detailed info, read this: http://web.archive.org/web/20120415040038/http://www.afp548.com/article.php?story=20050620071558293 On Sat, Apr 27, 2013 at 10:21 PM, Peng Yu pengyu...@gmail.com wrote: Hi, Where should I put these files and what commands shall be used to load them? On Sat, Apr 27, 2013 at 8:55 PM, Arno Hautala a...@alum.wpi.edu wrote: I use the following launchd task [1] and shell script [2] to automate weekly updates. You can remove the reference to portsign.sh, unless you want to share your compiled ports with another MacPorts installation [3]. [1]: https://gist.github.com/fracai/2324512 [2]: https://gist.github.com/fracai/2324493 [3]: https://trac.macports.org/wiki/howto/ShareArchives2 On Sat, Apr 27, 2013 at 5:55 PM, Clemens Lang c...@macports.org wrote: On Sat, Apr 27, 2013 at 04:16:50PM -0500, Ryan Schmidt wrote: And running MacPorts via root instead of via sudo will currently cause some problems: http://trac.macports.org/ticket/34221 You could use the workaround I proposed in https://lists.macosforge.org/pipermail/macports-dev/2013-April/022725.html (the mail is a reply to a mail that seems to have been moderated from the list, which is the reasons why it seems to be lacking some context) -- Clemens Lang ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users -- arno s hautala/-| a...@alum.wpi.edu pgp b2c9d448 ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users -- Regards, Peng -- arno s hautala/-| a...@alum.wpi.edu pgp b2c9d448 -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Correct crontab entry for port selfupdate port upgrade outdated
Hi, I have the following crontab entry /tmp$ sudo crontab -l 0 1 * * * sudo nice /opt/local/bin/bash -c set -v; ((echo '== port selfupdate =='; /opt/local/bin/port selfupdate) (echo '== port upgrade outdated =='; /opt/local/bin/port upgrade outdated)) /tmp/portupdate.log 21 But I always see the following error message. /tmp$ cat portupdate.log == port selfupdate == --- Updating MacPorts base sources using rsync Error: /opt/local/bin/port: port selfupdate failed: Error synchronizing MacPorts sources: command execution failed When I try to run manual port install, I see the following error message, which can be resolved by run 'sudo killall tclsh'. Waiting for lock on /opt/local/var/macports/registry/.registry.lock Does anybody know what is the correct way to set macports update automatically? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Re: Correct crontab entry for port selfupdate port upgrade outdated
Hi, Where should I put these files and what commands shall be used to load them? On Sat, Apr 27, 2013 at 8:55 PM, Arno Hautala a...@alum.wpi.edu wrote: I use the following launchd task [1] and shell script [2] to automate weekly updates. You can remove the reference to portsign.sh, unless you want to share your compiled ports with another MacPorts installation [3]. [1]: https://gist.github.com/fracai/2324512 [2]: https://gist.github.com/fracai/2324493 [3]: https://trac.macports.org/wiki/howto/ShareArchives2 On Sat, Apr 27, 2013 at 5:55 PM, Clemens Lang c...@macports.org wrote: On Sat, Apr 27, 2013 at 04:16:50PM -0500, Ryan Schmidt wrote: And running MacPorts via root instead of via sudo will currently cause some problems: http://trac.macports.org/ticket/34221 You could use the workaround I proposed in https://lists.macosforge.org/pipermail/macports-dev/2013-April/022725.html (the mail is a reply to a mail that seems to have been moderated from the list, which is the reasons why it seems to be lacking some context) -- Clemens Lang ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users -- arno s hautala/-| a...@alum.wpi.edu pgp b2c9d448 ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Is man from man-db available?
Hi, It seems that /opt/local/bin/man is not same as man on linux (which is from man-db). Is there a way to install man from man-db by macports? http://www.nongnu.org/man-db/ -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
macports on linux
Hi, Linux packages are usually outdated. Since macports are usually updated, is there a way to install macports on linux (e.g. ubuntu). -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
How to let g++ search for library directory /opt/local/lib/
Hi, g++ does not search /opt/local/lib/ by default. Does anybody know how to let it search /opt/local/lib/ by default? ~/linux/test/cpp/library/pcrecpp$ port select gcc Available versions for gcc: apple-gcc42 (active) llvm-gcc42 mp-gcc45 mp-gcc47 none ~/linux/test/cpp/library/pcrecpp$ g++ main.o -lpcrecpp -o main -L/opt/local/lib/ ~/linux/test/cpp/library/pcrecpp$ g++ main.o -lpcrecpp -o main ld: library not found for -lpcrecpp collect2: ld returned 1 exit status -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Re: How to let g++ search for library directory /opt/local/lib/
You should activate one of the MacPorts compilers instead of the apple version. mp-gcc47 and mp-gcc45 should automatically search in /opt/local/lib for libraries. ~/linux/test/cpp/library/pcrecpp$ sudo port select gcc mp-gcc45 Selecting 'mp-gcc45' for 'gcc' succeeded. 'mp-gcc45' is now active. ~/linux/test/cpp/library/pcrecpp$ g++ main.o -lpcrecpp -o main g++-mp-4.5: error trying to exec '/opt/local/bin/i686-apple-darwin11-llvm-g++-4.2': execvp: No such file or directory I get the above error. Does anybody know what is wrong? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
Source code of /opt/local/bin/getopt
Hi, I'm interested in see the source code for /opt/local/bin/getopt. Could anybody show me how to locate the source code of an executable in macports? Thanks! -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users
select default pip
Hi, I'm wondering if there is a way to select the default pip. It has been asked here. But I don't see a solution to the problem yet. Thanks! http://trac.macports.org/ticket/36178 -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Periodic macports update
Hi, I have the following crontab entry. ~$ sudo crontab -l Password: * 1 * * * bash -c /opt/local/bin/port selfupdate; /opt/local/bin/port upgrade outdated 1/tmp/portupdate_out.log 2/tmp/portupdate_err.log But it seems not working properly, as I always get an error like the following after the scheduled time of the crontab entry. ~$ sudo port upgrade tk Waiting for lock on /opt/local/var/macports/registry/.registry.lock I also notice that launchd succeed crontab on mac OS X. So it might be better to avoid launchd. Does anybody have some example on how to setup up port selfupdate and port upgrade outdated run periodically (say once a day)? Thanks! -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Re: Periodic macports update
On Fri, Dec 28, 2012 at 2:20 PM, Lawrence Velázquez larry.velazq...@gmail.com wrote: On Dec 28, 2012, at 10:07 AM, Peng Yu pengyu...@gmail.com wrote: I also notice that launchd succeed crontab on mac OS X. So it might be better to avoid launchd. I don't quite follow this logic. Sorry. I meant it might be better to use launchd. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Re: sudo port install tk -quartz problem (related with pymol)
On Wed, Dec 26, 2012 at 8:30 PM, Ryan Schmidt ryandes...@macports.org wrote: On Dec 26, 2012, at 20:29, Peng Yu wrote: On Wed, Dec 26, 2012 at 8:26 PM, Ryan Schmidt wrote: On Dec 26, 2012, at 20:22, Peng Yu wrote: On Wed, Dec 26, 2012 at 7:22 PM, Ryan Schmidt wrote: Yeah that's weird... for the record I don't see this problem on my system. So if you still see this problem after a rebuild, please attach a log of the build to the ticket. What the path of the log file I'm suppose to post? The location of the logfile is printed by the command: port logfile tk I don't find it. ~$ port logfile tk Error: Log file not found for port in /opt/local/var/macports/sources/rsync.macports.org/release/ports/x11/tk Explained in: https://trac.macports.org/ticket/37395#comment:7 I don't get what the solution is to this problem? (BTW, I have attached the log file to the ticket system.) -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Re: sudo port install tk -quartz problem (related with pymol)
On Wed, Dec 26, 2012 at 2:52 AM, Clemens Lang c...@macports.org wrote: Hi, On Tue, Dec 25, 2012 at 11:26:17PM -0600, Peng Yu wrote: Could not open /opt/local/lib:/opt/local/lib/libtk8.6.dylib: Error opening or reading file (referenced from /opt/local/bin/wish8.6) DEBUG: Marking /opt/local/bin/wish8.6 as broken what's the output of otool -L /opt/local/bin/wish8.6? Here is the output. $ otool -L /opt/local/bin/wish8.6 /opt/local/bin/wish8.6: /opt/local/lib/libfontconfig.1.dylib (compatibility version 8.0.0, current version 8.2.0) /opt/local/lib:/opt/local/lib/libtk8.6.dylib (compatibility version 8.6.0, current version 8.6.0) /opt/local/lib/libtcl8.6.dylib (compatibility version 8.6.0, current version 8.6.0) /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 169.3.0) /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation (compatibility version 150.0.0, current version 744.12.0) /opt/local/lib/libXft.2.dylib (compatibility version 6.0.0, current version 6.1.0) /opt/local/lib/libX11.6.dylib (compatibility version 10.0.0, current version 10.0.0) /opt/local/lib/libXss.1.dylib (compatibility version 2.0.0, current version 2.0.0) /opt/local/lib/libXext.6.dylib (compatibility version 11.0.0, current version 11.0.0) /opt/local/lib/libz.1.dylib (compatibility version 1.0.0, current version 1.2.7) -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Re: sudo port install tk -quartz problem (related with pymol)
On Wed, Dec 26, 2012 at 7:22 PM, Ryan Schmidt ryandes...@macports.org wrote: On Dec 26, 2012, at 18:30, Clemens Lang c...@macports.org wrote: On Wed, Dec 26, 2012 at 08:19:23AM -0600, Peng Yu wrote: $ otool -L /opt/local/bin/wish8.6 /opt/local/lib:/opt/local/lib/libtk8.6.dylib (compatibility version 8.6.0, current version 8.6.0) That's the problem. The part before (and including) the colon shouldn't be there. This might be a bug in the port; please file a ticket. Yeah that's weird... for the record I don't see this problem on my system. So if you still see this problem after a rebuild, please attach a log of the build to the ticket. What the path of the log file I'm suppose to post? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Re: sudo port install tk -quartz problem (related with pymol)
On Wed, Dec 26, 2012 at 8:26 PM, Ryan Schmidt ryandes...@macports.org wrote: On Dec 26, 2012, at 20:22, Peng Yu wrote: On Wed, Dec 26, 2012 at 7:22 PM, Ryan Schmidt wrote: Yeah that's weird... for the record I don't see this problem on my system. So if you still see this problem after a rebuild, please attach a log of the build to the ticket. What the path of the log file I'm suppose to post? The location of the logfile is printed by the command: port logfile tk I don't find it. ~$ port logfile tk Error: Log file not found for port in /opt/local/var/macports/sources/rsync.macports.org/release/ports/x11/tk Attach it to this ticket: https://trac.macports.org/ticket/37395 -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Re: sudo port install tk -quartz problem (related with pymol)
On Mon, Dec 24, 2012 at 10:04 PM, Clemens Lang c...@macports.org wrote: Hi, Quote: Please run port -d -y rev-upgrade and use the output to report a bug. Please post the output of the command mentioned. Here are the output. Let me know if there is anything else that I shall provide. DEBUG: skipping ppc in /Applications/MacPorts/sshfs.app/Contents/Resources/sshnodelay.so since this system can't run it anyway DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/bin/wineserver DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/bin/wmc DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/bin/wrc DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/acledit.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/aclui.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/activeds.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/actxprxy.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/advapi32.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/advpack.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/amstream.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/apphelp.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/appwiz.cpl.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/aspnet_regiis.exe.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/atl.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/attrib.exe.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/authz.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/avicap32.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/avifil32.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/avifile.dll16.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/avrt.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/bcrypt.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/browseui.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/cabarc.exe.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/cabinet.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/cacls.exe.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/capi2032.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/cards.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/cfgmgr32.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/clock.exe.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/clusapi.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/cmd.exe.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/comcat.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/comctl32.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/comdlg32.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/comm.drv16.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/commdlg.dll16.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/compobj.dll16.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/compstui.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/control.exe.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/credui.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/crtdll.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/crypt32.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/cryptdlg.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/cryptdll.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/cryptnet.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/cryptui.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/cscript.exe.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/ctapi32.dll.so DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/lib/wine/ctl3d.dll16.so DEBUG: Ignoring
How to install opengl using macports?
Hi, GL/glew.h I needs to have the above file installed, which I think is from OpenGL. Is mesa suppose to have the above file? I have the following ports installed. But I don't find GL/glew.h. Does anybody know which port I should install? The following ports are currently installed: mesa @8.0.4_0+python27+universal mesa @8.0.4_1+python27+universal mesa @8.0.4_2+python27 (active) -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Re: Why pip does not use gcc and g++ automatically? (Mountain Loin)
On Fri, Oct 19, 2012 at 5:09 PM, Ryan Schmidt ryandes...@macports.org wrote: On Oct 19, 2012, at 16:31, Peng Yu wrote: I have the following ports installed and I setup virtualenv correctly. sudo port -v install python27 port select python python27 sudo port install py27-pip sudo port install py27-virtualenv sudo port install py27-virtualenvwrapper But when I install a package within a virtual environment, I have to explicit specify the compiler as the following. Otherwise clang or clang++ will be used and the installation will yield error. Is it because macports was compiled by clang and clang++. Is there a way to that pip use g++/gcc as the default? CXX=g++ CC=gcc FFLAGS=-ff2c pip install scipy There is *no* gcc in Xcode 4.2 and later. In those versions of Xcode, the programs gcc and g++ are *not* gcc; they are symlinks to llvm-gcc-4.2 and llvm-g++-4.2. If a port does not compile correctly with clang, that is a bug and you should file a bug report in our issue tracker. It wasn't clear to me from what you wrote above what MacPorts port was not compiling properly with clang. It sounded like maybe you were talking about software that you install manually, not using a port. If so, take the matter up with the developers of that software. What I did was the following (besides installing the port packages as shown in the first email). mkdir $HOME/.virtualenvs Add the following to ~/.bashrc export WORKON_HOME=$HOME/.virtualenvs export VIRTUALENVWRAPPER_VIRTUALENV=/opt/local/bin/virtualenv-2.7 . /opt/local/bin/virtualenvwrapper.sh-2.7 source ~/.bashrc mkvirtualenv --distribute py workon py You will see a prompt (py) Under (py), run 'CXX=g++ CC=gcc FFLAGS=-ff2c pip install scipy'. It will finish successfully. If you just run 'pip install scipy', it will fail (I have closed the window, so I can not show the error message). My understanding is these python packages assume gcc but not clang, some options available to gcc are not available to clang. So it cause errors if clang is used. Would you please take a look if you can reproduce the same problem? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Re: Why pip does not use gcc and g++ automatically? (Mountain Loin)
There are py27-* ports among which is py27-scipy. Is py27-scipy what you are wanting? $ port echo name:^py27- I deliberately avoid using macports for installing packages as they are not always up to date and some packages are missing. See more discussion here for the usage of virtualenv. http://old.nabble.com/Can-pip-be-used-to-install-python-packages--td34575228.html -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Can pip be used to install python packages?
Hi, I remember it used to be the case that python packages has to be installed by port. But the problem is that python packages from macports are not very updated. Since there is py27-pip, can I use pip to install python packages so I can have the latest packages from http://pypi.python.org/pypi? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
port fuse4x-kext error
Hi,
I see the following error message. I'm installing fuse4x-kext. Does
anybody know what the problem is?
~$ cat
/opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_fuse_fuse4x-kext/fuse4x-kext/main.log
version:1
:debug:build changing euid/egid - current euid: 0 - current egid: 0
:debug:build egid changed to: 502
:debug:build euid changed to: 504
:debug:main Executing org.macports.main (fuse4x-kext)
:debug:main Privilege de-escalation not attempted as not running as root.
:debug:main Skipping completed org.macports.archivefetch (fuse4x-kext)
:debug:main Privilege de-escalation not attempted as not running as root.
:debug:main Skipping completed org.macports.fetch (fuse4x-kext)
:debug:main Privilege de-escalation not attempted as not running as root.
:debug:main Skipping completed org.macports.checksum (fuse4x-kext)
:debug:main Privilege de-escalation not attempted as not running as root.
:debug:main Skipping completed org.macports.extract (fuse4x-kext)
:debug:main Privilege de-escalation not attempted as not running as root.
:debug:main Skipping completed org.macports.patch (fuse4x-kext)
:debug:main Privilege de-escalation not attempted as not running as root.
:debug:main Skipping completed org.macports.configure (fuse4x-kext)
:debug:main Privilege de-escalation not attempted as not running as root.
:debug:build build phase started at Tue Sep 11 09:16:28 CDT 2012
:notice:build --- Building fuse4x-kext
:debug:build Executing org.macports.build (fuse4x-kext)
:debug:build Assembled command: 'cd
/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_fuse_fuse4x-kext/fuse4x-kext/work/fuse4x-kext-0.9.1
/usr/bin/xcodebuild -alltargets -configuration Release build
OBJROOT=build/ SYMROOT=build/ MACOSX_DEPLOYMENT_TARGET=10.8
ARCHS=x86_64 i386 SDKROOT=
GCC_VERSION=com.apple.compilers.llvm.clang.1_0 '
:info:build
:info:build You have not agreed to the Xcode license agreements,
please run 'xcodebuild -license' (for user-level acceptance) or 'sudo
xcodebuild -license' (for system-wide acceptance) from within a
Terminal window to review and agree to the Xcode license agreements.
:info:build Command failed: cd
/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_fuse_fuse4x-kext/fuse4x-kext/work/fuse4x-kext-0.9.1
/usr/bin/xcodebuild -alltargets -configuration Release build
OBJROOT=build/ SYMROOT=build/ MACOSX_DEPLOYMENT_TARGET=10.8
ARCHS=x86_64 i386 SDKROOT=
GCC_VERSION=com.apple.compilers.llvm.clang.1_0
:info:build Exit code: 69
:error:build org.macports.build for port fuse4x-kext returned: command
execution failed
:debug:build Error code: NONE
:debug:build Backtrace: command execution failed
while executing
$procedure $targetname
:info:build Warning: targets not executed for fuse4x-kext:
org.macports.activate org.macports.build org.macports.destroot
org.macports.install
:error:build Failed to install fuse4x-kext
:debug:build Registry error: fuse4x-kext not registered as installed active.
invoked from within
registry_active ${subport}
invoked from within
$workername eval registry_active \${subport}
:notice:build Please see the log file for port fuse4x-kext for details:
/opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_fuse_fuse4x-kext/fuse4x-kext/main.log
--
Regards,
Peng
___
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samtools build error
Hi, I got the following error when I install samtools, which I don't quite understand what the problem is and how to fix it. Could anybody let me know? Thanks! ~$ cat /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_samtools/samtools/main.log version:1 :debug:main epoch: in tree: 0 installed: 0 :debug:main zlib 1.2.7_0 exists in the ports tree :debug:main zlib 1.2.7_0 +universal is the latest installed :debug:main zlib 1.2.7_0 +universal is active :debug:main Merging existing variants '+universal' into variants :debug:main new fully merged portvariants: universal + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/archivers/zlib :debug:main OS darwin/12.1.0 (Mac OS X 10.8) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/xcodeversion-1.0.tcl :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf :debug:main Executing variant universal provides universal :debug:main No need to upgrade! zlib 1.2.7_0 = zlib 1.2.7_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main ncurses 5.9_1 exists in the ports tree :debug:main ncurses 5.9_1 +universal is the latest installed :debug:main ncurses 5.9_1 +universal is active :debug:main Merging existing variants '+universal' into variants :debug:main new fully merged portvariants: universal + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/ncurses :debug:main OS darwin/12.1.0 (Mac OS X 10.8) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf :debug:main Executing variant universal provides universal :debug:main No need to upgrade! ncurses 5.9_1 = ncurses 5.9_1 :msg:main --- Computing dependencies for samtools:info:main .:debug:main samtools has no conflicts :debug:main Searching for dependency: zlib :debug:main Found Dependency: receipt exists for zlib :debug:main Searching for dependency: ncurses :debug:main Found Dependency: receipt exists for ncurses :msg:main :debug:main Executing org.macports.main (samtools) :debug:main changing euid/egid - current euid: 0 - current egid: 0 :debug:main egid changed to: 502 :debug:main euid changed to: 504 :debug:main Skipping completed org.macports.archivefetch (samtools) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.fetch (samtools) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.checksum (samtools) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.extract (samtools) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.patch (samtools) :debug:main Privilege de-escalation not attempted as not running as root. :debug:main Skipping completed org.macports.configure (samtools) :debug:main Privilege de-escalation not attempted as not running as root. :debug:build build phase started at Tue Sep 11 10:44:58 CDT 2012 :notice:build --- Building samtools :debug:build Executing org.macports.build (samtools) :debug:build Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_samtools/samtools/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.8' :debug:build Assembled command: 'cd /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_samtools/samtools/work/samtools-0.1.17 /usr/bin/make -j8 -w all CC=/usr/bin/clang CFLAGS=-g -Wall -O2 -arch x86_64' :debug:build Executing command line: cd
Installing ports in parallel
Hi, I don't find a way to let port install multiple independent ports in parallel to maximally use the cores on a machine. Is there a way to do so? Thanks! -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Re: Installing ports in parallel
On Tue, Sep 11, 2012 at 12:50 PM, Ryan Schmidt ryandes...@macports.org wrote: On Sep 11, 2012, at 11:57, Peng Yu pengyu...@gmail.com wrote: I don't find a way to let port install multiple independent ports in parallel to maximally use the cores on a machine. Is there a way to do so? Thanks! This used to be allowed (unintentionally, I think) and would sometimes work, as long as the ports you were installing were truly independent of one another (including their complete dependency chains). But as soon as you started trying to do simultaneous port installs where parts of the dependency chains overlapped, and some of those overlapping dependencies were outdated or not installed yet, things did not work. Confusing error messages were printed that users often did not understand. We fixed the problem a few versions of MacPorts by introducing a lock mechanism that ensures that you can only install one port at a time. I miss the parallel install capability we used to have, but appreciate that this reduces the number of confusing problems our users could encounter, and thus decreases the number of problem reports we receive, which frees up our time to work on more interesting problems. There are many tools out there to handle dependencies for compiling software and for many other purpose as well. For example, GNU make, cmake, ant, maven, etc. I think that there should be (at least theoretically) some way of harness some of these tools to handle parallel builds of multiple ports even if they share dependency chains. Whether it is easy to implement is another issue and I don't know the answer. My inclination is that the feature that I request can be useful. As I can port using binaries for only a very small fraction of ports. Enabling parallel port can truly use all the cores to speed the process. Recently, I just migrate from Snow Leopard to Mountain Loin, It took almost 8 hours for me to completely install what had been previously installed. There should be something done to improve this process. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Update ocatve to the latest version
Hi, The current octave version is fairly old, considering that the current release is of version 3.6.2. Is there a reason that prevents the update to a more recent version of octave? Thanks! ~$ port search octave octave @3.2.4 (math, science) a Matlab-like environment for numerical analysis http://www.gnu.org/software/octave/download.html GNU Octave 3.6.2 was released May 31, 2012. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Which compiler to use with boost thread
Hi, /tmp$ port info boost boost @1.50.0 (devel) Variants: debug, [+]no_single, [+]no_static, openmpi, python25, python26, python27, python31, python32, regex_match_extra, universal Description: Boost provides free portable peer-reviewed C++ libraries. The emphasis is on portable libraries which work well with the C++ Standard Library. Homepage: http://www.boost.org Library Dependencies: zlib, expat, bzip2, libiconv, icu Platforms:darwin License: Boost-1 Maintainers: adfernan...@macports.org I have the above boost installed and I find the following library file installed. But I'm not sure which g++ shall be used with these libraries. Could anybody let me know how to figure it out? Thanks! /opt/local/lib/libboost_thread-mt.dylib /opt/local/lib/libboost_thread-mt.a -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
terminate installation by ctrl+C
Hi, I started a 'port install' process, which takes long, and I want to terminate it by typing ctrl+C. Is it a safe operation? Or it is better to just wait to avoid corrupting macports? Thanks! -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
How to install doclifter without changing the default python?
Hi, I got the following error. python26 is selected. But I use a different installation of python. Is there a way to install doclifter without changing the default python on my system? ~$ portinstall.sh doclifter Password: --- Computing dependencies for doclifter --- Dependencies to be installed: python26 --- Fetching archive for python26 --- Attempting to fetch python26-2.6.8_0.darwin_10.x86_64.tbz2 from http://packages.macports.org/python26 --- Attempting to fetch python26-2.6.8_0.darwin_10.x86_64.tbz2.rmd160 from http://packages.macports.org/python26 --- Installing python26 @2.6.8_0 --- Activating python26 @2.6.8_0 To make python 2.6 the default (i.e. the version you get when you run 'python'), please run: sudo port select --set python python26 --- Cleaning python26 --- Fetching archive for doclifter --- Attempting to fetch doclifter-2.3_1.darwin_10.x86_64.tbz2 from http://packages.macports.org/doclifter --- Attempting to fetch doclifter-2.3_1.darwin_10.x86_64.tbz2 from http://macports.packages.ionic.de/doclifter Error: org.macports.archivefetch for port doclifter returned: archivefetch failed for doclifter @2.3_1 Please see the log file for port doclifter for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_textproc_doclifter/doclifter/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port doclifter failed ~$ portselect.sh python Available versions for python: none python25-apple python26 (active) python26-apple python27 ~$ which python /Library/Frameworks/Python.framework/Versions/2.7/bin/python -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Re: How to install doclifter without changing the default python?
On Mon, Aug 13, 2012 at 12:37 PM, Lawrence Velázquez larry.velazq...@gmail.com wrote: On Aug 13, 2012, at 10:29 a.m., Peng Yu wrote: --- Fetching archive for doclifter --- Attempting to fetch doclifter-2.3_1.darwin_10.x86_64.tbz2 from http://packages.macports.org/doclifter --- Attempting to fetch doclifter-2.3_1.darwin_10.x86_64.tbz2 from http://macports.packages.ionic.de/doclifter Error: org.macports.archivefetch for port doclifter returned: archivefetch failed for doclifter @2.3_1 I'm not sure this has anything to do with python26. MacPorts can't fetch the archive for some reason. Please see the log file for port doclifter for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_textproc_doclifter/doclifter/main.log Please show us this log. Here you are. ~$ cat /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_textproc_doclifter/doclifter/main.log version:1 :msg:main --- Computing dependencies for doclifter:info:main .:debug:main doclifter has no conflicts :debug:main Searching for dependency: python26 :debug:main Didn't find receipt, going to depspec regex for: python26 :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/lang/python26 :debug:main OS darwin/10.8.0 (Mac OS X 10.6) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/select-1.0.tcl :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :info:main .:debug:main python26 has no conflicts :debug:main Searching for dependency: gettext :debug:main Found Dependency: receipt exists for gettext :debug:main Searching for dependency: zlib :debug:main Found Dependency: receipt exists for zlib :debug:main Searching for dependency: openssl :debug:main Found Dependency: receipt exists for openssl :debug:main Searching for dependency: sqlite3 :debug:main Found Dependency: receipt exists for sqlite3 :debug:main Searching for dependency: db46 :debug:main Found Dependency: receipt exists for db46 :debug:main Searching for dependency: ncurses :debug:main Found Dependency: receipt exists for ncurses :debug:main Searching for dependency: bzip2 :debug:main Found Dependency: receipt exists for bzip2 :debug:main Searching for dependency: libedit :debug:main Found Dependency: receipt exists for libedit :debug:main Searching for dependency: python_select :debug:main Found Dependency: receipt exists for python_select :msg:main :msg:main --- Dependencies to be installed: python26 :debug:main Starting logging for python26 :debug:main Executing org.macports.main (doclifter) :debug:main changing euid/egid - current euid: 0 - current egid: 0 :debug:main egid changed to: 502 :debug:main euid changed to: 504 :debug:archivefetch archivefetch phase started at Mon Aug 13 09:23:30 CDT 2012 :msg:archivefetch --- Fetching archive for doclifter :debug:archivefetch Executing org.macports.archivefetch (doclifter) :debug:archivefetch euid/egid changed to: 0/0 :debug:archivefetch chowned /opt/local/var/macports/incoming to macports :debug:archivefetch euid/egid changed to: 504/502 :info:archivefetch --- doclifter-2.3_1.darwin_10.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified :msg:archivefetch --- Attempting to fetch doclifter-2.3_1.darwin_10.x86_64.tbz2 from http://packages.macports.org/doclifter :debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 :msg:archivefetch --- Attempting to fetch doclifter-2.3_1.darwin_10.x86_64.tbz2 from http://macports.packages.ionic.de/doclifter :debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 :error:archivefetch org.macports.archivefetch for port doclifter returned: archivefetch failed for doclifter @2.3_1 :debug:archivefetch Error code: NONE :debug:archivefetch Backtrace: archivefetch failed for doclifter @2.3_1 while executing portarchivefetch::fetchfiles (procedure portarchivefetch::archivefetch_main line 5) invoked from within $procedure $targetname :info:archivefetch Warning: targets not executed for doclifter: org.macports.activate org.macports.archivefetch org.macports.fetch org.macports.checksum org.macports.extract org.macports.patch org.macports.configure org.macports.build org.macports.destroot org.macports.install :notice:archivefetch
Where is the manpage of ack (a.k.a ack-grep on ubuntu)?
Hi, I don't see man page of ack. Is it available from macports? Or my installation has some problem? Is there is a way to test my installation regarding this issue? Thanks! -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Enable +conceal for vim?
Hi, conceal is not enable for vim. Is there a way to enable it? Thanks! ~$ vim --version VIM - Vi IMproved 7.3 (2010 Aug 15, compiled Jul 26 2012 01:05:30) MacOS X (unix) version Included patches: 1-244, 246-615 Compiled by root@peng-yus-macbook-pro.local Normal version without GUI. Features included (+) or not (-): -arabic +autocmd -balloon_eval -browse +builtin_terms +byte_offset +cindent -clientserver +clipboard +cmdline_compl +cmdline_hist +cmdline_info +comments -conceal +cryptv -cscope +cursorbind +cursorshape +dialog_con +diff +digraphs -dnd -ebcdic -emacs_tags +eval +ex_extra +extra_search -farsi +file_in_path +find_in_path +float +folding -footer +fork() +gettext -hangul_input +iconv +insert_expand +jumplist -keymap -langmap +libcall +linebreak +lispindent +listcmds +localmap -lua +menu +mksession +modify_fname +mouse -mouseshape -mouse_dec -mouse_gpm -mouse_jsbterm -mouse_netterm -mouse_sysmouse +mouse_xterm -mouse_urxvt +multi_byte +multi_lang -mzscheme +netbeans_intg +path_extra -perl +persistent_undo +postscript +printer -profile +python -python3 +quickfix +reltime -rightleft -ruby +scrollbind +signs +smartindent -sniff +startuptime +statusline -sun_workshop +syntax +tag_binary +tag_old_static -tag_any_white -tcl +terminfo +termresponse +textobjects +title -toolbar +user_commands +vertsplit +virtualedit +visual +visualextra +viminfo +vreplace +wildignore +wildmenu +windows +writebackup -X11 -xfontset -xim -xsmp -xterm_clipboard -xterm_save system vimrc file: /opt/local/etc/vimrc user vimrc file: $HOME/.vimrc user exrc file: $HOME/.exrc fall-back for $VIM: /opt/local/share/vim Compilation: /usr/bin/gcc-4.2 -c -I. -Iproto -DHAVE_CONFIG_H -I/opt/local/include -DMACOS_X_UNIX -no-cpp-precomp -pipe -O2 -arch x86_64 -U_FORTIFY_SOURCE -D_FORTIFY_SOURCE=1 Linking: /usr/bin/gcc-4.2 -L/opt/local/lib -arch x86_64 -L/usr/local/lib -o vim -lm -lncurses -liconv -lintl -framework Cocoa -L/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/config -lpython2.7 -framework CoreFoundation -u _PyMac_Error /opt/local/Library/Frameworks/Python.framework/Versions/2.7/Python ~$ which vim /opt/local/bin/vim -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo/macports-users
Is man gp available?
Hi, I have pari installed. But I don't see man gp. Is there a way to double check whether man gp should be available or not? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Where is gprc? (pari package)
Hi, On ubuntu installation of pari-gp, there is /etc/gprc, which is used by gp. But I don't find gprc in macports' pari, and it seems that gp does not load any system wide gprc file. Shall this be fixed? Thanks! -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: Where is gprc? (pari package)
On Tue, Jul 3, 2012 at 8:13 PM, Brandon Allbery allber...@gmail.com wrote: On Tue, Jul 3, 2012 at 8:44 PM, Peng Yu pengyu...@gmail.com wrote: On ubuntu installation of pari-gp, there is /etc/gprc, which is used by gp. But I don't find gprc in macports' pari, and it seems that gp does not load any system wide gprc file. Shall this be fixed? Thanks! Even if it doesn't come with one, it will probably (if it follows the usual configure-stye rules) use one created at /opt/local/etc/gprc. I assume that you meant if there were such a file (/opt/local/etc/gprc), gp would use it. But since there is no such a file, gp will just skip this step? Or gp still trys to access /etc/gprc? ~$ cat /opt/local/etc/gprc cat: /opt/local/etc/gprc: No such file or directory -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: Where is gprc? (pari package)
Running it under dtruss should give you the answer, if all else fails. Never knew dtruss. Good to know. It indeed access /etc/gprc. Shall this problem be corrected in macports? 165 open_nocancel(/etc/gprc\0, 0x0, 0x1B6) = -1 Err#2 -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
graphviz problem: Warning: Could not load /opt/local/lib/graphviz/libgvplugin_pango.6.dylib - file not found
Hi, ~/linux/test/graphviz/bin/dot$ port installed |grep graph graphviz @2.28.0_3 graphviz-devel @2.29.20120521.0446_0 (active) graphviz-gui-devel @2.29.20120521.0446_0 (active) dot was installed by macports. And I worked perfectly before. But now, I run into the following problem. The file /opt/local/lib/graphviz/libgvplugin_pango.6.dylib is available on my system. Does anybody know why dot says it is not available? Thanks! ~/linux/test/graphviz/bin/dot$ which dot /opt/local/bin/dot ~/linux/test/graphviz/bin/dot$ dot -v Warning: Could not load /opt/local/lib/graphviz/libgvplugin_pango.6.dylib - file not found dot - graphviz version 2.29.20120521.0446 (20120521.0446) libdir = /opt/local/lib/graphviz Warning: Could not load /opt/local/lib/graphviz/libgvplugin_pango.6.dylib - file not found Activated plugin library: libgvplugin_dot_layout.6.dylib Using layout: dot:dot_layout Activated plugin library: libgvplugin_core.6.dylib Using render: dot:core Using device: dot:dot:core The plugin configuration file: /opt/local/lib/graphviz/config6 was successfully loaded. render : cairo dot eps fig gd lasi map pic pov ps quartz svg tk vml vrml xdot layout : circo dot fdp neato nop nop1 nop2 osage patchwork sfdp twopi textlayout : textlayout device : bmp canon cgimage cmap cmapx cmapx_np dot eps exr fig gd gd2 gif gv imap imap_np ismap jp2 jpe jpeg jpg pct pdf pic pict plain plain-ext png pov ps ps2 psd sgi svg svgz tga tif tiff tk vml vmlz vrml wbmp webp x11 xdot xlib loadimage : (lib) bmp eps gd gd2 gif jpe jpeg jpg pdf png ps svg webp xbm ~/linux/test/graphviz/bin/dot$ ll /opt/local/lib/graphviz/libgvplugin_pango.6.dylib -rwxr-xr-x 1 root admin 39848 2012-05-21 16:10:38 /opt/local/lib/graphviz/libgvplugin_pango.6.dylib -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Installing macports packages from binary
Hi, One problem with macports is that it take a long time to get the packages compiled. If I don't a whole system selfupdate and upgrade, it can take hours. This is unbearable. I think that there are only limited number of Mac OSes. Is possible to add a new feature to allow installation from binary directly? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: graphviz problem: Warning: Could not load /opt/local/lib/graphviz/libgvplugin_pango.6.dylib - file not found
On Fri, Jun 1, 2012 at 9:55 AM, Jeremy Lavergne jer...@lavergne.gotdns.org wrote: /opt/local/lib/graphviz/libgvplugin_pango.6.dylib What version of libffi do you have installed? It was updated recently which broke graphviz, which was then marked for a rebuild just 30 minutes ago (https://trac.macports.org/changeset/93852). Try selfupdate and upgrade outdated ports, then see if graphviz works again. After I run 'sudo port upgrade outdated', I got the following. --- Computing dependencies for orbit2 --- Deactivating orbit2 @2.14.19_0+universal --- Cleaning orbit2 --- Activating orbit2 @2.14.19_1+universal --- Cleaning orbit2 Error: Requested variants do not match original selection +universal. Please use the same variants again, perform 'port clean gconf' or specify the force option (-f). Error: Unable to upgrade port: 1 To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Should I run 'sudo port -f clean gconf'? I'm not sure if there is some unwanted consequence. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
What is mp-gcc?
Hi, I see mp-gcc*. I can find what mp stands for? Could anybody let me know? Thanks! ~$ port select --list gcc Available versions for gcc: gcc40 gcc42 llvm-gcc42 mp-gcc44 mp-gcc45 mp-gcc46 none (active) -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Do I have correct boost python installed?
Hi, I have boost installed. ~$ port installed|grep boost boost @1.48.0_4 boost @1.49.0_0 (active) I have the python directory. /opt/local/include/boost$ ls -d python python But I don't find the library file. How to get library files installed? Thanks! /opt/local/include/boost$ ll /opt/local/lib/libboost_py* ls: cannot access /opt/local/lib/libboost_py*: No such file or directory -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: Distributing binaries in macports
Hi Chris, Still waiting for the transcript from a 'sudo port -v install some-random-port' …. I just got some time to install another package. Here you go. I assume that Building ... means compiling and linking. If that is the case, I can see that some packages are directly installed from binaries. But somes are not, for example, gnupg. Do I understand the message correctly? $ sudo port install pwman Password: --- Computing dependencies for pwman --- Dependencies to be installed: gnupg libusb-compat libusb openldap --- Fetching archive for libusb --- Attempting to fetch libusb-1.0.8_0.darwin_10.x86_64.tbz2 from http://packages.macports.org/libusb --- Attempting to fetch libusb-1.0.8_0.darwin_10.x86_64.tbz2.rmd160 from http://packages.macports.org/libusb --- Installing libusb @1.0.8_0 --- Activating libusb @1.0.8_0 --- Cleaning libusb --- Fetching archive for libusb-compat --- Attempting to fetch libusb-compat-0.1.3_0.darwin_10.x86_64.tbz2 from http://packages.macports.org/libusb-compat --- Attempting to fetch libusb-compat-0.1.3_0.darwin_10.x86_64.tbz2.rmd160 from http://packages.macports.org/libusb-compat --- Installing libusb-compat @0.1.3_0 --- Activating libusb-compat @0.1.3_0 --- Cleaning libusb-compat --- Fetching archive for openldap --- Attempting to fetch openldap-2.4.21_4.darwin_10.x86_64.tbz2 from http://packages.macports.org/openldap --- Attempting to fetch openldap-2.4.21_4.darwin_10.x86_64.tbz2.rmd160 from http://packages.macports.org/openldap --- Installing openldap @2.4.21_4 --- Activating openldap @2.4.21_4 --- Cleaning openldap --- Fetching archive for gnupg --- Attempting to fetch gnupg-1.4.11_1.darwin_10.x86_64.tbz2 from http://packages.macports.org/gnupg --- Fetching gnupg --- Attempting to fetch gnupg-1.4.11.tar.bz2 from http://distfiles.macports.org/gnupg --- Verifying checksum(s) for gnupg --- Extracting gnupg --- Configuring gnupg --- Building gnupg --- Staging gnupg into destroot --- Installing gnupg @1.4.11_1 --- Activating gnupg @1.4.11_1 --- Cleaning gnupg --- Fetching archive for pwman --- Attempting to fetch pwman-0.4.4_0.darwin_10.x86_64.tbz2 from http://packages.macports.org/pwman --- Attempting to fetch pwman-0.4.4_0.darwin_10.x86_64.tbz2.rmd160 from http://packages.macports.org/pwman --- Installing pwman @0.4.4_0 --- Activating pwman @0.4.4_0 --- Cleaning pwman -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Distributing binaries in macports
Hi, I'm not sure if there is a way so that I can directly install binaries from macports. Right now, macports compiles packages during installation, which may take too long to finish and take too much cpu time. Would you please let me know if there is such an option available? Thanks! -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: Distributing binaries in macports
On Wed, Jan 4, 2012 at 10:34 AM, Jeremy Lavergne jer...@lavergne.gotdns.org wrote: I have never changed anything in macports.conf. What I'm suppose to look for in this file? This is the only currently included setting: #portarchivetype tbz2 I see this is commented as you have shown. Should I uncomment it or keep it as is? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: Distributing binaries in macports
On Wed, Jan 4, 2012 at 10:30 AM, Peng Yu pengyu...@gmail.com wrote: MacPorts will download pre-built binaries if they're available (e.g., they're built, the license permits binary distribution). I just installed ImageMagick. It seems that macports compiled it rather download the binary directly. I think that IM's license should allow compilation to binary. If you never see attempts made to fetch from packages.macports.org, you might want to check your macports.conf to ensure none of the archive-related settings are being set to something outside of the defaults. I have never changed anything in macports.conf. What I'm suppose to look for in this file? My OS is 10.6.8. Hi Chris, I just realize that I didn't send this to the mailing list. Here is my OS info. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: Distributing binaries in macports
On Wed, Jan 4, 2012 at 5:56 PM, Ryan Schmidt ryandes...@macports.org wrote: On Jan 4, 2012, at 09:56, Chris Jones wrote: Also note binary tarballs are only available for OSX 10.6 at the moment. And only for x86_64. If you're running Snow Leopard on a 32-bit Mac (i.e. you have a Core processor instead of a Core 2 processor), or if you're trying to build universal, you won't get binaries for those either. My Macbook Pro is 64bit. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
macports document in pdf
Hi, I only see html version document. But I prefer a pdf version. Besides creating one from html, is there any pdf document for macports? http://guide.macports.org/ -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Where is gcc_select installed?
Hi, I'm wondering where gcc_select is installed? I have it installed already. /opt/local/var/macports$ port installed |grep gcc_select gcc_select @0.1_5 (active) According to this page, there should be a command called gcc_select. But I just don't find one. Is my understanding wrong? https://trac.macports.org/wiki/UsingTheRightCompiler -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: Does gcc45 support -arch?
Hi Ryan, If you still cannot figure out where the `-arch` flags are coming from, show us a complete log of the output of running `configure` and `make`. The config.log may be helpful too. I can not single out a simple test case. But please try compile the following package at the following address. http://www.tbi.univie.ac.at/~ronny/RNA/ViennaRNA/ViennaRNA-2.0.0.tar.gz I have gcc45 active. After run configure, I run make make, then I got error in the Perl directory. The problem is that the following automatically generated file has the -arch argument. I don't want to change it manually as it is automatically generated. ./Perl/Makefile.perl:44:LDFLAGS = -Wl,-search_paths_first -arch i386 -arch x86_64 -Wl,-syslibroot,/Developer/SDKs/MacOSX10.5.sdk -mmacosx-version-min=10.5 -fstack-protector The gcc version: ~$ which gcc /opt/local/bin/gcc ~$ gcc --version gcc (GCC) 4.5.3 Copyright (C) 2010 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. The error message: gcc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -arch i386 -arch x86_64 -nostdinc -B/Developer/SDKs/MacOSX10.5.sdk/usr/include/gcc -B/Developer/SDKs/MacOSX10.5.sdk/usr/lib/gcc -isystem/Developer/SDKs/MacOSX10.5.sdk/usr/include -F/Developer/SDKs/MacOSX10.5.sdk/System/Library/Frameworks -mmacosx-version-min=10.5 -DUSE_SITECUSTOMIZE -DPERL_RELOCATABLE_INCPUSH -fno-merge-constants -fno-strict-aliasing -pipe -fstack-protector -O3 -DVERSION=\2.0.0\ -DXS_VERSION=\2.0.0\ -I/usr/local/ActivePerl-5.14/lib/CORE RNA_wrap.c gcc: unrecognized option '-no-cpp-precomp' cc1: error: unrecognized command line option -arch cc1: error: unrecognized command line option -arch Please let me know if there is anything that is not cleary to you. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: Does gcc45 support -arch?
Outside of MacPorts (and even within MacPorts, when you've selected a non-Apple compiler using `configure.compiler`), `-arch` is not passed to the compiler by default. Either the specific third-party software you're trying to build is doing so deliberately (if this is the case, patch that software to not do that); or it's making use of It is a little strange to me that more than I got the -arch problem for more than one third party packages. I'd suspect that there is some configuration issues on my mac machine, otherwise it not be likely to have several packages have the same problem. But this is just my speculation. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: Does gcc45 support -arch?
On Sat, Dec 17, 2011 at 11:27 PM, Ryan Schmidt ryandes...@macports.org wrote: On Dec 17, 2011, at 23:25, Peng Yu wrote: I have gcc45 active. After run configure, I run make make, then I got error in the Perl directory. The problem is that the following automatically generated file has the -arch argument. I don't want to change it manually as it is automatically generated. ./Perl/Makefile.perl:44:LDFLAGS = -Wl,-search_paths_first -arch i386 -arch x86_64 -Wl,-syslibroot,/Developer/SDKs/MacOSX10.5.sdk -mmacosx-version-min=10.5 -fstack-protector Sounds like https://trac.macports.org/ticket/24779 which was just fixed. Have you already run sudo port selfupdate and sudo port upgrade outdated? I have daily updated automatically running. So my system should be updated. I just tried it again. Does the error at the end mean the install is up to date? ~$ sudo sudo port selfupdate --- Updating MacPorts base sources using rsync MacPorts base version 2.0.3 installed, MacPorts base version 2.0.3 downloaded. --- Updating the ports tree --- MacPorts base is already the latest version The ports tree has been updated. To upgrade your installed ports, you should run port upgrade outdated ~$ sudo port upgrade outdated Error: No ports matched the given expression -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: Does gcc45 support -arch?
Which perl ports are installed? I see. Now it sounds obvious. I use ActivePerl rather than perl from port, because I'm not able to use other perl packages when they are not supported in macports, if I use perl from port. Besides Brandon's recommendation, PATH=/usr/bin:$PATH make. I guess the only other walkaround is that I have to gcc_select the default the mac native compile when it is necessary. Is there any other better solution? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Does gcc45 support -arch?
Hi, gcc from gcc45 seems not able to recognize the -arch option. I'm wondering whether it should be the case or I did anything wrong? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: Does gcc45 support -arch?
-arch is part of Apple's private patches to support multiple-architecture objects and binaries, and is only supported by Apple's Xcode compilers. Whenever, I try to install a number of third packages, -arch is somehow supplied to gcc/g++ (I have to going back to the original mac compiler, which is inconvenient). I'm wondering whether there is a walkaround to change -arch to the GCC equivalent? I checked my env, but I don't see how -arch is passed to gcc/g++. Is there a configuration file that I can change? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Suggest removing all python packages from macports repository
Hi, I used to use python from macports. But it seems to be inconvenient and many python packages are not available in macports. Once you start using macport for python packages, basically you lose the opportunity to use any native method for installing python packages. Therefore, I recommend to remove all python package entirely from macports to reduce any future confusion, unless all the python packages can be found in macports repository (which is unlike to happen). Although I'm no expert on python, to use python and any python packages, I find that the following method the most convenient. Download the python installation dmg from the following link for the target Mac OS architecture. http://www.python.org/getit/ Set the following environment variables (in bash, change it according if you use a different shell). export PATH=/Library/Frameworks/Python.framework/Versions/2.7/bin:$PATH export MANPATH=/Library/Frameworks/Python.framework/Versions/2.7/share/man:$MANPATH Install easy_install by following instructions here http://pypi.python.org/pypi/setuptools#cygwin-mac-os-x-linux-other Install all python packages using easy_install. For example, to install mercurial (for that matter, I also recommend removing mercurial from macports), run the following command. easy_install -U mercurial Just my 2 cents. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
cpan2port -v -t LaTeX::Table error
Hi,
I get the following error, when I run the following command. But I get
no error when I tried a different package. Does anybody how to fix the
error?
~/Downloads/macports/test$ cpan2port -v -t Latex::Table
Going to read '/Users/pengy/.cpan/Metadata'
Database was generated on Wed, 23 Nov 2011 17:30:03 GMT
(((can't expand Latex::Table at /Users/pengy/linux/bin/bin/cpan2port line 142.
))) at /Users/pengy/linux/bin/bin/cpan2port line 337
main::foreach_pkg('CODE(0x100803ea0)') called at
/Users/pengy/linux/bin/bin/cpan2port line 362
~/Downloads/macports/test$ cpan2port -v -t Math::Round
Going to read '/Users/pengy/.cpan/Metadata'
Database was generated on Wed, 23 Nov 2011 17:30:03 GMT
Math::Round is not perl porter
Math::Round will show deps
Running get for module 'Math::Round'
Checksum for
/Users/pengy/.cpan/sources/authors/id/G/GR/GROMMEL/Math-Round-0.06.tar.gz
ok
trying to find dist in /Users/pengy/.cpan/build/Math-Round-0.06*
---
rmd160: c9f68f179d77a992a1bf21b0918457415a6789c9
sha256: a5086f7693ac49a9bdcdc9cccff9159be527d150951319c061bfb2e0dedb8da4
--
Regards,
Peng
___
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How to distinguish broken link and good link using ls --color=auto?
Hi, ls --color=auto on ubuntu distinguishes broken and good links. But it seems that the same command does not do so using the macports version. Is there a way to mimic the behavior on ubuntu? /opt/local/libexec/gnubin/ls -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Prompt what package to install when it is missing
Hi, On ubuntu, it can prompt me what to do if a package is missing. I'm wondering if there is anything similar on mac. ~$ hg The program 'hg' is currently not installed. You can install it by typing: sudo apt-get install mercurial -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: Prompt what package to install when it is missing
On Fri, Nov 11, 2011 at 1:26 PM, Ryan Schmidt ryandes...@macports.org wrote: On Nov 11, 2011, at 13:02, Peng Yu wrote: On ubuntu, it can prompt me what to do if a package is missing. I'm wondering if there is anything similar on mac. ~$ hg The program 'hg' is currently not installed. You can install it by typing: sudo apt-get install mercurial Phil, I think you missed the point of the question. The question is, if a user knows they need a program called hg but they don't have it installed, what can they do to find out what port, if any, would install it? I happen to know that hg is provided by the port mercurial, but someone not familiar with the software might not know that. The answer is that there is no feature in MacPorts to help you with that. port provides only works if you know exactly where the file is on disk, and if you already have the port installed. port search only works if the maintainer put the name of the program into the port's description. So, to find out what software package provides a given program, your best bet is to use an Internet search engine, e.g. Google. Then use port search to find out if MacPorts has a port for that software package. That was my question. Although searching in google is one option, it will be convenient if it can be prompt at the command line (google search is much slower than a direct command line prompt). I'm not sure what is used in ubuntu, but if ubuntu can do it, theoretically, port should also be able to do it. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: Prompt what package to install when it is missing
On Fri, Nov 11, 2011 at 1:53 PM, Phillip Koebbe phillip.koe...@gmail.com wrote: On Nov 11, 2011, at 1:02 PM, Peng Yu wrote: Hi, On ubuntu, it can prompt me what to do if a package is missing. I'm wondering if there is anything similar on mac. ~$ hg The program 'hg' is currently not installed. You can install it by typing: sudo apt-get install mercurial Since Ubuntu is based on Debian, it's built around APT and knows what's installed. I know of nothing built-in, either in the Mac OS or in MacPorts, that could do the same thing. Since there are various ways of installing software on a Mac (download a dmg/pkg, Mac App Store, MacPorts, Homebrew, self-compile, etc), and you can have software installed in various places (/opt, /sw, /usr/local, /Applications, ~/Applications, etc), I'm inclined to think it would be quite difficult to pull off for a third party application. I was not taking about the general question as you mentioned. A smaller step is to just prompt macport packages. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
MAMP www.mamp.info and macports' phpMyAdmin compatibility
Hi, I have installed MAMP through www.mamp.info, which is much simpler than MAMP from macports. Then I wan to install phpMyAdmin with macports. I'm wondering if phpMyAdmin with macports is compatible with MAMP from www.mamp.info. Does anybody have any experience? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Install python module in macports
Hi, py27-pdfminer is not available in port. I want to install it in my machine. Could anybody let me know what the correct way to install python modules so that they are compatible with macports? Thanks! -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
How to install doxygen --with-doxywizard?
Hi, The default installation of doxygen does not have doxywizard. Is there anyway to enable doxywizard? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
How to install a perl packages that is not available in mac port?
Hi, I'm wondering how to install a perl package if it is not available on mac port. I remember that I can not use cpan, as it will mess up with port installation. I tried the following. But I'm not sure how to install once the package is built on my machine. https://trac.macports.org/wiki/howto/cpan2port -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: How to install a perl packages that is not available in mac port?
On Sun, Aug 14, 2011 at 9:29 AM, Ryan Schmidt ryandes...@macports.org wrote: On Aug 14, 2011, at 09:22, Peng Yu wrote: I'm wondering how to install a perl package if it is not available on mac port. I remember that I can not use cpan, as it will mess up with port installation. Correct, using cpan, or other non-MacPorts methods, to install files into the MacPorts prefix, is not recommended. I tried the following. But I'm not sure how to install once the package is built on my machine. https://trac.macports.org/wiki/howto/cpan2port Using cpan2port is a great way to get a start at a Portfile that can be used to install the port. Testing a local portfile is easy. Simply cd into the new port's directory and type sudo port install. Once you have a port that works, you can submit it by creating a ticket in the issue tracker. It is not quite clear to me how to submit the package that ported. How to specify the dependencies? Would you please let me know? Also, is there a chance that a cpan package will not work with port? If it is always going to work, can we automatically port all cpan packages to mac port so that less human intervention is needed? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
How to make the link pdf2txt.py-2.7 without '-2.7'?
Hi, I installed the following package. But the link has the extra version number. Is there a way to remove it from port? sudo port install py27-pdfminer ~$ ll `which pdf2txt.py-2.7 ` lrwxr-xr-x 1 root admin 74 2011-07-30 12:19:03 /opt/local/bin/pdf2txt.py-2.7 - /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/pdf2txt.py -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: How to make the link pdf2txt.py-2.7 without '-2.7'?
On Sat, Jul 30, 2011 at 4:16 PM, Ryan Schmidt ryandes...@macports.org wrote: On Jul 30, 2011, at 12:41, Peng Yu wrote: I installed the following package. But the link has the extra version number. Is there a way to remove it from port? Yes, but we're not going to do that. There is also the port py26-pdfminer, and it installs the binary pdf2txt.py-2.6. They can't both install pdf2txt.py or they would conflict with one another. Just use the binary with its suffixed name. Or use it with its original name from the long framework path. If this is just about the inconvenience of typing the command in the terminal, you can set up a shell alias to make it more convenient. Sorry, that I didn't state my question clearly. I remember there is a command (using port) to select whether to use py26 or py27 even both are installed (I forget the command name). Is there something similar for pdf2txt.py-2.7 so that I can select which version of pdf2txt.py is going to be used without having to specify the suffix? sudo port install py27-pdfminer ~$ ll `which pdf2txt.py-2.7 ` lrwxr-xr-x 1 root admin 74 2011-07-30 12:19:03 /opt/local/bin/pdf2txt.py-2.7 - /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/pdf2txt.py -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
gtk-doc installation error configure: error: could not find DocBook XML DTD V4.3 in XML catalog
I always get this error. Does anybody know how to fix the error and install gtk-doc? $ sudo port -d install gtk-doc . checking for DocBook XML DTD V4.3 in XML catalog... not found configure: error: could not find DocBook XML DTD V4.3 in XML catalog shell command cd /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_gnome_gtk-doc/work/gtk-doc-1.17 ./configure --prefix=/opt/local --with-xml-catalog=/opt/local/etc/xml/catalog returned error 1 Error: Target org.macports.configure returned: configure failure: shell command failed (see log for details) DEBUG: Backtrace: configure failure: shell command failed (see log for details) while executing $procedure $targetname Warning: the following items did not execute (for gtk-doc): org.macports.activate org.macports.configure org.macports.build org.macports.destroot org.macports.install Log for gtk-doc is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_gnome_gtk-doc/main.log Error: Status 1 encountered during processing. To report a bug, see http://guide.macports.org/#project.tickets -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
gtk-doc installation error
Hi, I get the following error. Does anybody know how to fix the problem? The content of the log file is posted at the bottom. $sudo port install gtk-doc Password: --- Computing dependencies for gtk-doc --- Configuring gtk-doc Error: Target org.macports.configure returned: configure failure: shell command failed (see log for details) Log for gtk-doc is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_gnome_gtk-doc/main.log Error: Status 1 encountered during processing. To report a bug, see http://guide.macports.org/#project.tickets -- Regards, Peng version:1 :debug:main epoch: in tree: 0 installed: 0 :debug:main gnome-doc-utils 0.20.6_0 exists in the ports tree :debug:main gnome-doc-utils 0.20.6_0 +python27 is the latest installed :debug:main gnome-doc-utils 0.20.6_0 +python27 is active :debug:main Merging existing variants '+python27' into variants :debug:main new fully merged portvariants: python27 + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/gnome/gnome-doc-utils :debug:main OS darwin/10.7.0 (Mac OS X 10.6) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main only one arch supported, so not adding the default universal variant :debug:main Executing variant python27 provides python27 :debug:main No need to upgrade! gnome-doc-utils 0.20.6_0 = gnome-doc-utils 0.20.6_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main gettext 0.18.1.1_2 exists in the ports tree :debug:main gettext 0.18.1.1_2 is the latest installed :debug:main gettext 0.18.1.1_2 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/gettext :debug:main OS darwin/10.7.0 (Mac OS X 10.6) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/archcheck-1.0.tcl :debug:main universal variant already exists, so not adding the default one :debug:main No need to upgrade! gettext 0.18.1.1_2 = gettext 0.18.1.1_2 :debug:main epoch: in tree: 0 installed: 0 :debug:main libiconv 1.13.1_0 exists in the ports tree :debug:main libiconv 1.13.1_0 is the latest installed :debug:main libiconv 1.13.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/textproc/libiconv :debug:main OS darwin/10.7.0 (Mac OS X 10.6) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :debug:main No need to upgrade! libiconv 1.13.1_0 = libiconv 1.13.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main ncurses 5.9_0 exists in the ports tree :debug:main ncurses 5.9_0 is the latest installed :debug:main ncurses 5.9_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/devel/ncurses :debug:main OS darwin/10.7.0 (Mac OS X 10.6) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing
Install mesa problem
Hi, I get the following error when I install mesa. It seems that the download failed. Does anybody know what the problem is? -- Regards, Peng $sudo port install mesa --- Computing dependencies for mesa --- Dependencies to be installed: makedepend xorg-dri2proto xorg-glproto --- Fetching makedepend --- Verifying checksum(s) for makedepend --- Extracting makedepend --- Configuring makedepend --- Building makedepend --- Staging makedepend into destroot --- Installing makedepend @1.0.3_0 --- Activating makedepend @1.0.3_0 --- Cleaning makedepend --- Fetching xorg-dri2proto --- Verifying checksum(s) for xorg-dri2proto --- Extracting xorg-dri2proto --- Configuring xorg-dri2proto --- Building xorg-dri2proto --- Staging xorg-dri2proto into destroot --- Installing xorg-dri2proto @2.3_0 --- Activating xorg-dri2proto @2.3_0 --- Cleaning xorg-dri2proto --- Fetching xorg-glproto --- Verifying checksum(s) for xorg-glproto --- Extracting xorg-glproto --- Configuring xorg-glproto --- Building xorg-glproto --- Staging xorg-glproto into destroot --- Installing xorg-glproto @1.4.12_0 --- Activating xorg-glproto @1.4.12_0 --- Cleaning xorg-glproto --- Fetching mesa --- Attempting to fetch MesaLib-7.10.3.tar.bz2 from ftp://ftp.freedesktop.org/pub/mesa/7.10.3/ --- Attempting to fetch MesaLib-7.10.3.tar.bz2 from http://ykf.ca.distfiles.macports.org/MacPorts/mpdistfiles/mesa --- Attempting to fetch MesaLib-7.10.3.tar.bz2 from http://distfiles.macports.org/mesa --- Attempting to fetch MesaLib-7.10.3.tar.bz2 from http://lil.fr.distfiles.macports.org/mesa --- Attempting to fetch MesaLib-7.10.3.tar.bz2 from http://aarnet.au.distfiles.macports.org/pub/macports/mpdistfiles/mesa --- Attempting to fetch MesaLib-7.10.3.tar.bz2 from http://www.buraphalinux.org/download/bls2.0/dvd_source/source/xorg/xserver/mesa/ --- Attempting to fetch MesaLib-7.10.3.tar.bz2 from http://sea.us.distfiles.macports.org/macports/mpdistfiles/mesa --- Attempting to fetch MesaLib-7.10.3.tar.bz2 from http://svn.macports.org/repository/macports/distfiles/mesa Error: Target org.macports.fetch returned: fetch failed Log for mesa is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_x11_mesa/main.log Error: Status 1 encountered during processing. To report a bug, see http://guide.macports.org/#project.tickets ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
About lock on simultaneous port
Hi, I'm not patient enough to wait port to finish sometime, especially when I need to install an additional package when a port process is already running. Therefore, I'd like to run more than one port process simultaneously. But currently, it doesn't allow me to do so. I'm wondering if it is possible to make the lock more granular so that I can run multiple port processes. $sudo port install pdftk Password: Waiting for lock on /opt/local/var/macports/registry/.registry.lock -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Which texlive package has mtmi.tfm?
Hi, The default installation of texlive doesn't include mtmi.tfm. I assume that it should be in some textlive-* package. Could anybody let me know which it is? http://www.ctan.org/tex-archive/fonts/mt11p -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
How to install perl package Class/CSV.pm using port?
Hi, I get the following error when I run a perl script. Class/CSV.pm is missing. I remember that I should use port rather than cpan to install perl modules. But I'm not sure how to find the corresponding port package for any given perl module. Is there a systematic naming convention for converting module names from perl to port? What port package is form Class/CSV.pm? Can't locate Class/CSV.pm in @INC (@INC contains: /opt/local/lib/perl5/site_perl/5.12.3/darwin-multi-2level /opt/local/lib/perl5/site_perl/5.12.3 /opt/local/lib/perl5/vendor_perl/5.12.3/darwin-multi-2level /opt/local/lib/perl5/vendor_perl/5.12.3 /opt/local/lib/perl5/5.12.3/darwin-multi-2level /opt/local/lib/perl5/5.12.3 /opt/local/lib/perl5/site_perl /opt/local/lib/perl5/vendor_perl .) at ./xxx.pl line 7. BEGIN failed--compilation aborted at ./xxx.pl line 7. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
'port upgrade outdated' stops at gcc44
Hi, 'port upgrade outdated' stops at gcc44. Does anyone know why this happens and how to fix it? $sudo port upgrade outdated Password: --- Computing dependencies for gcc44 --- Fetching gcc44 --- Attempting to fetch gcc-core-4.4.6.tar.bz2 from ftp://gcc.gnu.org/pub/gcc/releases/gcc-4.4.6/ -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: 'port upgrade outdated' stops at gcc44
On Sat, May 28, 2011 at 1:53 PM, Ryan Schmidt ryandes...@macports.org wrote: On May 28, 2011, at 08:45, Peng Yu wrote: 'port upgrade outdated' stops at gcc44. Does anyone know why this happens and how to fix it? $sudo port upgrade outdated Password: --- Computing dependencies for gcc44 --- Fetching gcc44 --- Attempting to fetch gcc-core-4.4.6.tar.bz2 from ftp://gcc.gnu.org/pub/gcc/releases/gcc-4.4.6/ This was just answered again recently: http://lists.macosforge.org/pipermail/macports-users/2011-May/024362.html The GNU FTP server seems to have problems for some users (including me) and randomly disconnects in a way that MacPorts doesn't detect that this has happened (and MacPorts continues waiting forever for data that will never arrive). You could cancel and try again and MacPorts might pick a different mirror, but if it picks the GNU FTP server again, it will probably fail again. Try downloading the files manually from a MacPorts mirror like http://distfiles.macports.org/gcc44/ and putting them where MacPorts expects them (in this case, /opt/local/var/macports/distfiles/gcc44). Is there a way to specify which website to download by port? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
winetricks: Error: Checksum (sha1) mismatch for winetricks
Hi, I get the following error when I try to install winetricks. I checked Ticket port. It seems that this error appeared before and has been fixed. Could anybody let me know what the problem is and how to successfully install winetricks? ~$sudo port install winetricks Warning: port definitions are more than two weeks old, consider using selfupdate --- Computing dependencies for winetricks --- Dependencies to be installed: cabextract zenity libnotify --- Fetching cabextract --- Attempting to fetch cabextract-1.3.tar.gz from http://distfiles.macports.org/cabextract --- Verifying checksum(s) for cabextract --- Extracting cabextract --- Configuring cabextract --- Building cabextract --- Staging cabextract into destroot --- Installing cabextract @1.3_0 --- Activating cabextract @1.3_0 --- Cleaning cabextract --- Fetching libnotify --- Attempting to fetch libnotify-0.5.2.tar.bz2 from ftp://ftp.cse.buffalo.edu/pub/Gnome/sources/libnotify/0.5 --- Verifying checksum(s) for libnotify --- Extracting libnotify --- Configuring libnotify --- Building libnotify --- Staging libnotify into destroot --- Installing libnotify @0.5.2_1 --- Activating libnotify @0.5.2_1 --- Cleaning libnotify --- Fetching zenity --- Attempting to fetch zenity-2.30.0.tar.bz2 from ftp://ftp.cse.buffalo.edu/pub/Gnome/sources/zenity/2.30/ --- Verifying checksum(s) for zenity --- Extracting zenity --- Configuring zenity --- Building zenity --- Staging zenity into destroot --- Installing zenity @2.30.0_0 --- Activating zenity @2.30.0_0 --- Cleaning zenity --- Fetching winetricks --- Attempting to fetch winetricks from http://www.kegel.com/wine/ --- Verifying checksum(s) for winetricks Error: Checksum (sha1) mismatch for winetricks Error: Checksum (rmd160) mismatch for winetricks Error: Target org.macports.checksum returned: Unable to verify file checksums Log for winetricks is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_x11_winetricks/main.log Error: Status 1 encountered during processing. To report a bug, see http://guide.macports.org/#project.tickets -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: texlive-bin fails to update
On Sat, Feb 12, 2011 at 12:26 PM, Ryan Schmidt ryandes...@macports.org wrote: On Feb 12, 2011, at 11:19, Peng Yu wrote: --- Building texlive-bin [snip] :info:build tex-file.c: In function 'kpathsea_init_format': :info:build tex-file.c:489: error: 'DEFAULT_GFFONTS' undeclared (first use in this function) Looks like this ticket: https://trac.macports.org/ticket/27471 Try reinstalling texlive-common. I got the following error when I tried to uninstall texlive-common. How to uninstall all the dependent packages automatically and reinstall texlive-common and those dependent packages again? $sudo port uninstall texlive-common Password: --- Unable to uninstall texlive-common 2010_1, the following ports depend on it: --- texlive-bin --- texlive-documentation-base --- texlive-basic --- texlive-latex --- texlive-bin-extra --- texlive-metapost --- texlive-context --- texlive-documentation-english --- texlive-fontutils --- texlive-fonts-recommended --- texlive-lang-czechslovak --- texlive-lang-dutch --- texlive-lang-french --- texlive-lang-german --- texlive-lang-italian --- texlive-lang-polish --- texlive-lang-portuguese --- texlive-lang-spanish --- texlive-lang-ukenglish --- texlive-latex-recommended --- texlive-math-extra --- texlive-xetex --- texlive-luatex --- texlive-generic-recommended Error: port uninstall failed: Please uninstall the ports that depend on texlive-common first. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Error: port activate failed: Registry error
Hi, I get the following error. Could you let me know what I should do? Thank you! $sudo port -f activate texlive-common Password: --- The following versions of texlive-common are currently installed: --- texlive-common @2009_1 --- texlive-common @2010_1 Error: port activate failed: Registry error: Please specify the full version as recorded in the port registry. -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
Re: perl error when using modules
On Mon, Oct 4, 2010 at 8:13 PM, Ryan Schmidt ryandes...@macports.org wrote: On Oct 4, 2010, at 19:37, Peng Yu wrote: When I run a perl program that calls SSLeay, I get the following error. I try to install SSLeay by 'cpan Net::SSLeay', but the problem is still not solved. Could you please let me know how to fix the problem? Can't load '/opt/local/lib/perl5/site_perl/5.8.9/darwin-2level/auto/Net/SSLeay/SSLeay.bundle' for module Net::SSLeay: dlopen(/opt/local/lib/perl5/site_perl/5.8.9/darwin-2level/auto/Net/SSLeay/SSLeay.bundle, 1): Library not loaded: /opt/local/lib/libssl.0.9.8.dylib Referenced from: /opt/local/lib/perl5/site_perl/5.8.9/darwin-2level/auto/Net/SSLeay/SSLeay.bundle Reason: image not found at /opt/local/lib/perl5/5.8.9/darwin-2level/DynaLoader.pm line 230. at wsp.pl line 88 Compilation failed in require at wsp.pl line 88. BEGIN failed--compilation aborted at wsp.pl line 88. So the problem is that the SSLeay.bundle installed by p5-net-ssleay is still linking with the old openssl 0.9.8 library. openssl was updated to 1.0.0 in July. p5-net-ssleay also received a revision bump at that time, so you should have been prompted to rebuild it to fix this. See: http://trac.macports.org/ticket/25114 Have you run sudo port selfupdate and sudo port upgrade outdated lately? If not, please do. Note, you should not install perl modules using the cpan command; instead, you should install them using MacPorts. For example, as I hinted at above, the Net::SSLeay module is provided by the p5-net-ssleay port. I suspect that I used cpan to install SSLeay before, because even after I run sudo port selfupdate, sudo port upgrade outdated and sudo port install p5-net-ssleay, I still see the same error message about SSLeay. Do you know what is the method to remove SSLeay installed by cpan? -- Regards, Peng ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users
