[MARMAM] PhD opportunity at OSU: climate change impacts on blue whales and their prey

2023-12-30 Thread Leigh Torres

Dear MARMAM community,

The Geospatial Ecology of Marine Megafauna (GEMM) Lab,within the Marine Mammal 
Institute at Oregon State University (OSU), isrecruiting a PhD student 
interested in marine predator and prey response toclimate change. The 
successful candidate will join a NSF funded multidisciplinaryproject called 
SAPPHIRE - Synthesis of Acoustics, Physiology, Prey, and Habitatin a Rapidly 
Changing Environment. The SAPPHIRE project aims to understand howshifting prey 
(krill) availability and quality due to climate change willimpact predator 
(blue whale) health and population resilience. We seek a PhDstudent to lead one 
of these two projects as their thesis work: (1) Assessrelationships between 
krill abundance, oceanography, and blue whale behaviorand body condition; (2) 
Integrate predator and prey physiological data todevelop predictive models of 
species vulnerability and resilience toenvironmental change. The PhD student 
will enroll in Fall 2024 and be advisedby Dr. Leigh Torres within the 
Department of Fisheries, Wildlife andConservation Sciences at OSU. Please read 
more about the GEMM Lab, theDepartment, required and desired qualifications, 
the SAPPHIRE project, and Dr.Torres’s letter to prospective students at this 
link: https://mmi.oregonstate.edu/gemm-lab/prospective-studentsProspective 
students from diverse, minority, and underrepresented communities(including 
first generation college graduates) are particularly encouraged toapply. 
Interested candidates should send a 2-page CV and 1-page cover 
letteremphasizing fit for the project to 
leigh.tor...@oregonstate.edu;Applications are due March 15th, and a decision 
will be made by May 1.
Cheers,
LeighTorres, Ph.D.AssociateProfessor, Oregon State UniversityTheGeospatial 
Ecology of Marine Megafauna Lab (GEMM Lab)Marine MammalInstitute, Oregon Sea 
GrantDepartmentof Fisheries, Wildlife, and Conservation SciencesHatfieldMarine 
Science Center, 2030 SE Marine Science DriveNewport,OR 97365, U.S.AWebsite    
Blog  









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[MARMAM] New paper: Use of drones for behavioral observation

2018-09-12 Thread Leigh Torres
Hello Colleagues,
My co-authors and I are proud to announce our recent publication that 
demonstrates the added value of Unmanned Aerial Systems (UAS; drones) to the 
behavioral observation of marine megafauna, specifically marine mammals:
Drone Up! Quantifying Whale Behavior From a New Perspective Improves 
Observational Capacity. Torres, L. G., S. L. Nieukirk, L. Lemos and T. E. 
Chandler. 2018. Frontiers in Marine Science 5.

The paper is open access and is freely accesible for download here:
http://journal.frontiersin.org/article/10.3389/fmars.2018.00319/full?_source=Email_to_authors__medium=Email_content=T1_11.5e1_author_campaign=Email_publication==Frontiers_in_Marine_Science=394495
The paper also includes a supplementary material of behavioral video clips of 
gray whale behaviors observed via the drone.
Cheers,Leigh
Abstract:During traditional boat-based surveys of marine megafauna, behavioral 
observations are typically limited to records of animal surfacings obtained 
from a horizontal perspective. Achieving an aerial perspective has been 
restricted to brief helicopter or airplane based observations that are costly, 
noisy, and risky. The emergence of commercial small unmanned aerial systems 
(UAS) has significantly reduced these constraints to provide a stable, 
relatively quiet, and inexpensive platform that enables replicate observations 
for prolonged periods with minimal disturbance. The potential of UAS for 
behavioral observation appears immense, yet quantitative proof of utility as an 
observational tool is required. We use UAS footage of gray whales foraging in 
the coastal waters of Oregon, United States to develop video behavior analysis 
methods, determine the change in observation time enabled by UAS, and describe 
unique behaviors observed via UAS. Boat-based behavioral observations from 53 
gray whale sightings between May and October 2016 were compared to behavioral 
data extracted from video analysis of UAS flights during those sightings. We 
used a DJI Phantom 3 Pro or 4 Advanced, recorded video from an altitude ≥25 m, 
and detected no behavioral response by whales to the UAS. Two experienced whale 
ethologists conducted UAS video behavioral analysis, including tabulation of 
whale behavior states and events, and whale surface time and whale visible time 
(total time the whale was visible including underwater). UAS provided three 
times more observational capacity than boat-based observations alone (300 vs. 
103 min). When observation time is accounted for, UAS data provided more and 
longer observations of all primary behavior states (travel, forage, social, and 
rest) relative to boat-based data, especially foraging. Furthermore, UAS enable 
documentation of multiple novel gray whale foraging tactics (e.g., headstands: 
n = 58; side-swimming: n = 17; jaw snapping and flexing: n = 10) and 33 social 
events (nursing and pair coordinated surfacings) not identified from boat-based 
observation. This study demonstrates the significant added value of UAS to 
marine megafauna behavior and ecological studies. With technological advances, 
robust study designs, and effective analytical tools, we foresee increased UAS 
applications to marine megafauna studies to elucidate foraging strategies, 
habitat associations, social patterns, and response to human disturbance.


Leigh Torres, PhD.

Assistant Professor; Oregon Sea Grant
Department of Fisheries and Wildlife, Marine Mammal Institute

Oregon State University, Hatfield Marine Science Center

2030 SE Marine Science Drive

Newport, OR 97365, U.S.A

541-867-0895

Webpage: http://mmi.oregonstate.edu/gemm-lab

Lab blog: http://blogs.oregonstate.edu/gemmlab/
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[MARMAM] New paper on how cetaceans use their senses to find prey

2017-08-08 Thread Leigh Torres
Dear colleagues,
Have you ever wondered how cetaceans locate and discriminate prey?
If so, you may be interested in my recent review paper published in Marine 
Mammal Science about how cetaceans use their senses to find prey depending on 
distance to target:
A sense of scale: Foraging cetaceans' use of scale-dependent multimodal sensory 
systems 
The paper is open access, so freely downloadable here:
http://onlinelibrary.wiley.com/doi/10./mms.12426/full

Abstract:
Research on cetacean foraging ecology is central to our understanding oftheir 
spatial and behavioral ecology. Yet, functional mechanisms by whichcetaceans 
detect prey across different scales remain unclear. Here, I postulate 
thatcetaceans utilize a scale-dependent, multimodal sensory system to assess 
andincrease prey encounters. I review the literature on cetacean sensory 
systemsrelated to foraging ecology, and hypothesize the effective scales of 
eachsensory modality to inform foraging opportunities. Next, I build 
two“scale-of-senses” schematics for the general groups of dolphins and 
baleenwhales. These schematics illustrate the hypothetical interchange of 
sensory modalities used tolocate and discriminate prey at spatial scales 
ranging from 0 m to 1,000 km:(1) vision, (2) audition (sound production and 
sound reception), (3)chemoreception, (4) magnetoreception, and somatosensory 
perception of (5) preyor (6) oceanographic stimuli. The schematics illustrate 
how a cetacean may integratesensory modalities to form an adaptive foraging 
landscape as a function ofdistance to prey. The scale-of-senses schematic is 
flexible, allowing forcase-specific application and enhancement with improved 
cetacean sensory data.The framework serves to improve our understanding of 
functional cetaceanforaging ecology, and to develop new hypotheses, methods, 
and results regardinghow cetaceans forage at multiple scales. 

Cheers,Leigh
Leigh Torres, Ph.D.Assistant Professor; Oregon Sea GrantDepartment of Fisheries 
and Wildlife, Marine Mammal Institute Oregon State University, Hatfield Marine 
Science Center2030 SE Marine Science DriveNewport, OR 97365, 
U.S.A541-867-0895Webpage: http://mmi.oregonstate.edu/gemm-lab Lab blog: 
http://blogs.oregonstate.edu/gemmlab/  




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[MARMAM] Post-doc on Steller sea lion habitat modeling

2016-06-27 Thread Leigh Torres
Dear MARMAM community, 
The Alaska SeaLife Center inSeward, Alaska, is recruiting for a postdoctoral 
researcher in EcologicalModeling.


This 17 month position locatedin Seward will analyze existing tracking data 
from juvenile Steller sea lionsin the Gulf of Alaska. This is a collaborative 
project between the ASLC, OregonState University and the Alaska Department of 
Fish and Game. 


For details and applicationmaterial, please 
visit:https://alaskasealifecenter.gatherdocs.com/listing/2459


The position will remain open until July 13, 2016.
 Cheers,

Markus Horning
Science Director
Alaska SeaLife Center
Direct: (907) 224-6324
P.O. Box 1329 • 301 Railway Ave • Seward, AK 99664
www.alaskasealife.org

    

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[MARMAM] Marine Mammal Ecologist position, Wellington, New Zealand

2013-11-28 Thread Leigh Torres
Marine Mammal Ecologist – Wellington - NIWA

NIWA
is New Zealand's leading environmental science research institute and the key
provider of atmospheric, freshwater and marine research and consultancy
services. We wish to appoint talented and enthusiastic marine mammal researcher
with demonstrated quantitative skills to lead a cetacean habitat use modelling
project based upon existing sightings data. This project is funded by a
combination of internal and external funds and will require establishing strong
working relationships with external stakeholders. 
 
You
will also work closely with a team undertaking research on the population
demographics, foraging ecology, migrations and distribution of a variety of
marine megafauna, with a particular focus on the relationships between key
species, their environment and human activities. In addition, you will undertake
consultancy work for government agencies and commercial entities, develop new 
research
opportunities and prepare funding proposals. Regular and timely publication of
high quality scientific reports and papers is expected.
 
With
a PhD in marine ecology or biology and at least two years post-graduate
experience in quantitative marine mammal ecology, you will have a demonstrated
knowledge and understanding of analysis of sightings, locations, and
distribution data, habitat use modelling, marine mammal ecology, and 
environmental
drivers of and threats to threatened cetacean populations, and experience in
designing and carrying out field campaigns in remote locations. Your ability to
communicate complex matters to both technical and general audiences will
ideally be backed by a strong publication record and history of oral
presentations and scientific reporting.
 
We provide an excellent work environment, offer
competitive remuneration and benefits, and an attractive waterfront location at
Greta Point.
 
A job description, online applications and further
information about NIWA can be found at 
https://careers.sciencenewzealand.org/niwa/niwa-jobs


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[MARMAM] Paper on southern right whale offshore habitat use patterns, climate change and ship traffic

2013-05-13 Thread Leigh Torres
Dear friends and colleagues,

I would like to inform you of a recent publication in the journal Diversity
and Distributions by myself and colleagues regarding southern right whale
habitat use patterns in the Australasian region and their potential threats
from climate change and ship traffic. Our study uses historical whaling data
from the 1800s in a boosted regression tree modelling framework to generate the
first quantitative description of the offshore foraging habitat of southern
right whale. The abstract is pasted below.

You can download the article here:
http://onlinelibrary.wiley.com/doi/10./ddi.12069/abstract

Or email me directly for a copy:
l.tor...@niwa.co.nz

Thanks for your interest.
Cheers,
Leigh

Dr. Leigh G. Torres
Spatial Marine Ecologist
NIWA
301 Evans Bay Parade
Private Bag 14901
Wellington, New Zealand
Tel: +64 4 382 1628
Mob: +64 27 123 4567
l.tor...@niwa.co.nz
http://www.niwa.co.nz/
 
From exploitation to conservation: Habitat models
using whaling data predict distribution patterns and threat exposure of an
endangered whale 
Abstract
Aim: Sufficient data to describe spatial distributions of
rare and threatened populations are typically difficult to obtain. For example,
there are minimal modern offshore sightings of the endangered southern right
whale, limiting our knowledge of foraging grounds and habitat use
patterns.  Using historical exploitation data of southern right whales, we
aim to better understand their seasonal offshore distribution patterns in
relation to broad-scale oceanography, and to predict their exposure to shipping
traffic and response to global climate change.  
Location: Australasian region between 130°W and 100°E, and
30°S and 55°S. 
 
Methods: We model 19th century whaling data with boosted
regression trees to determine functional responses of whale distribution
relative to environmental factors. Habitat suitability maps are generated and
we validate these predictions with independent historical and recent sightings.
We identify areas of increased risk of ship-strike by integrating predicted
whale distribution maps with shipping traffic patterns. We implement predicted
ocean temperatures for the 2090-2100 decade in our models to predict changes in
whale distribution due to climate change.
 
Results: Temperature in the upper 200 m, distance from the
subtropical front, mixed layer depth, chlorophyll concentration and distance
from ridges are the most consistent and influential predictors of whale
distribution. Validation tests of predicted distributions determined generally
high predictive capacity. We identify two areas of increased risk of vessel
strikes and predict substantial shifts in habitat suitability and availability
due to climate change.
 
Main conclusions: Our results represent the first
quantitative description of the offshore foraging habitat of southern right
whales. Conservation applications include identifying areas and causes of
threats to southern right whales, generating effective mitigation strategies,
and directing population monitoring and research efforts. Our study
demonstrates the benefits of incorporating unconventional datasets such as
historic exploitation data into species distribution models to inform
management and help combat biodiversity loss.
Keywords: 
Boosted regression trees, distribution patterns, global
climate change, habitat use, historic data, rare species, species distribution
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[MARMAM] Habitat modeling paper

2008-10-10 Thread Leigh Torres
Dear Colleagues,

I would like to bring your attention to the following paper that was recently 
published in Ecological Applications. In particular, I believe this paper will 
be of interest to those who are working on predictive habitat models of marine 
mammals. The article may be downloaded from 
ftp://ecap-18-06-07_07-1455_rfp:[EMAIL PROTECTED] or by request to me.

Cheers,
Leigh Torres


Torres, L., Read, A., and Halpin, P. 2008. Fine-scale habitat modeling of a top 
marine predator: Do prey data improve predictive capacity? Ecological 
Applications. 18(7), 1702-1717.

Abstract:

Predators and prey assort themselves relative to each other, the availability 
of resources and refuges, and the temporal and spatial scale of their 
interaction. Predictive models of predator distributions often rely on these 
relationships by incorporating data on environmental variability and prey 
availability to determine predator habitat selection patterns. This approach to 
predictive modeling holds true in marine systems where observations of 
predators are logistically difficult, emphasizing the need for accurate models. 
In this paper, we ask whether including prey distribution data in fine-scale 
predictive models of bottlenose dolphin (Tursiops truncatus) habitat selection 
in Florida Bay, Florida, USA, improves predictive capacity. Environmental 
characteristics are often used as predictor variables in habitat models of top 
marine predators with the assumption that they act as proxies of prey 
distribution. We examine the validity of this assumption by
 comparing the response of dolphin distribution and fish catch rates to the 
same environmental variables. Next, the predictive capacities of four models, 
with and without prey distribution data, are tested to determine whether 
dolphin habitat selection can be predicted without recourse to describing the 
distribution of their prey. The final analysis determines the accuracy of 
predictive maps of dolphin distribution produced by modeling areas of high fish 
catch based on significant environmental characteristics. We use spatial 
analysis and independent data sets to train and test the models. Our results 
indicate that, due to high habitat heterogeneity and the spatial variability of 
prey patches, fine-scale models of dolphin habitat selection in coastal 
habitats will be more successful if environmental variables are used as 
predictor variables of predator distributions rather than relying on prey data 
as explanatory variables. However, predictive modeling
 of prey distribution as the response variable based on environmental 
variability did produce high predictive performance of dolphin habitat 
selection, particularly foraging habitat.


Leigh G. Torres
Post-doctoral researcher
National Institute of Water and Atmospheric Research (NIWA)
301 Evans Bay Parade, Greta Point, 
Kilbirnie, Wellington, New Zealand. 
E-mail: [EMAIL PROTECTED]



  
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