Re: [MORPHMET] Crowdsourced GM Bibliography

[Mauro Cavalcanti]

Dear Robert & ALL,

I have, for some years already, keeping lists of GM bibliographies
(selected groups of organisms), as part of the MorphoLib project (
http://morpholib.netai.net). All references are ket in downloadable files
in BiBTeX format and seachable interfaces are provided (automatically
generated from the bibliography files using the Jabref manager).

Hope this helps.

Best regards,

2016-03-09 12:57 GMT-03:00 Robert Z. Selden, Jr. :

> In an attempt to centralize the large wealth (and breadth) of knowledge
> generated through studies of geometric morphometrics, I thought that we
> might all collaborate on a working bibliography. And since geometric
> morphometrics is comprised of a fairly tight-knit international community, 
> *why
> not* make this a crowdsourced project?
>
>
>
> Since the great majority of practitioners are familiar–at least
> peripherally–with scripting, the bibliography is maintained in BibTeX, and
> can be edited in Overleaf. Additionally, using the field “annote,” the
> abstracts for each paper can be included. Further still, the BibTeX text in
> the GMBib.bib file can be cut, then pasted into a text file, where it can
> be imported to a number of reference and .pdf managers.
>
>
>
> I do ask that if you add a citation, you follow the current (BibTeX)
> format, and also place each new reference in alphabetical order (let
> Overleaf refresh after each entry to ensure there are no errors). This will
> help us to ensure that we are not duplicating citations that have already
> been added. Additionally, if you have more information (abstract, DOI,
> etc.) for a reference in the bibliography that is currently posted, please
> add that information.
>
>
>
> The goal of this endeavor is to maintain an active (and accurate) list of
> publications related to geometric morphometrics that can be used in
> classrooms, laboratories, and–yes–your own personal reference manager, and
> to have it maintained by the community of practitioners. So please add your
> new publications as soon as they’re available!
>
>
>
> To begin adding references to the current bibliography, click here
> .
>
>
>
> To generate a searchable .pdf of the current bibliography, simply click on
> the PDF tab at the top of the screen in Overleaf. Feel free to share the *Read
> and Edit* link (
> https://wordpress.com/page/crhrarchaeology.wordpress.com/89371) with
> colleagues and co-workers.
>
>
>
> Any and all users can add new references and edit existing references
> using this link
> .
>
>
>
> If you run into any issues, or just have questions, please forward those
> along.
>
>
>
> I’ve also added a link to my blog (
> https://crhrarchaeology.wordpress.com/morphometrics/gm-bibliography-project/)
> where this same text is posted (archaeologists are nothing if not
> redundant). Many thanks in advance for your contributions—I think that this
> can be a great resource.
>
>
>
> Best,
>
> Zac
>
>
>
>
>
>
>
> --
> MORPHMET may be accessed via its webpage at http://www.morphometrics.org
> ---
> You received this message because you are subscribed to the Google Groups
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> To unsubscribe from this group and stop receiving emails from it, send an
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>



-- 
Dr. Mauro J. Cavalcanti
E-mail: mauro...@gmail.com
Web: http://sites.google.com/site/maurobio

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Re: [MORPHMET] Crowdsourced GM Bibliography

[Carmelo Fruciano]

Dear Zac,
I think that the idea is, on principle, a good one and I would  
certainly add my publications.


In practice, however, similar efforts have been put in place over  
time. For instance, Dennis Slice used to maintain a list of papers on  
the morphometrics.org website. Since long, Mauro Cavalcanti has  
maintained a fairly comprehensive list of fish geometric morphometric  
papers and, more recently, a more general website with morphometric  
papers called MorphoLib http://morpholib.netai.net/cms/ where papers  
are categorized by organism.


Now, I guess the main difference of this new effort you are proposing  
is that it would be crowdsourced.
One of the problems of this and similar efforts is that geometric  
morphometrics is now so popular that it becomes hard to imagine to  
catalog all geometric morphometric papers.
Considering that a resource like MorphoLib already exists and how  
powerful even a simple Google Scholar search can be, I wonder if it  
would be more useful to the community to have some more focused  
bibliography/list.


An idea could be to include just methodological (or mainly  
methodological) papers. This is because methodological papers are  
sometimes hard to find using generic searches (such as "geometric  
morphometrics" which would return a mix of empirical and  
methodological papers, even a more focused search would often return a  
mixture of empirical and methodological paper). Older methodological  
papers are also sometimes "forgotten" by authors when writing  
manuscripts in favour of more recent papers and/or the software  
implementing those methods (I am possibly guilty of this myself, even  
if I try to avoid it).
Perhaps, having some list of methodological references (organized by  
topic) would help and, being more focused, would be more comprehensive  
and easier to maintain than a generic geometric morphometric papers  
list.


Again, this is not to discourage a commendable effort, but rather, to  
provide my opinion on what might be more useful to the community.

Just my two cents,
Carmelo




"Robert Z. Selden, Jr."  ha scritto:


In an attempt to centralize the large wealth (and breadth) of knowledge
generated through studies of geometric morphometrics, I thought that we
might all collaborate on a working bibliography. And since geometric
morphometrics is comprised of a fairly tight-knit international community,
why not make this a crowdsourced project?



Since the great majority of practitioners are familiar-at least
peripherally-with scripting, the bibliography is maintained in BibTeX, and
can be edited in Overleaf. Additionally, using the field "annote," the
abstracts for each paper can be included. Further still, the BibTeX text in
the GMBib.bib file can be cut, then pasted into a text file, where it can be
imported to a number of reference and .pdf managers.



I do ask that if you add a citation, you follow the current (BibTeX) format,
and also place each new reference in alphabetical order (let Overleaf
refresh after each entry to ensure there are no errors). This will help us
to ensure that we are not duplicating citations that have already been
added. Additionally, if you have more information (abstract, DOI, etc.) for
a reference in the bibliography that is currently posted, please add that
information.



The goal of this endeavor is to maintain an active (and accurate) list of
publications related to geometric morphometrics that can be used in
classrooms, laboratories, and-yes-your own personal reference manager, and
to have it maintained by the community of practitioners. So please add your
new publications as soon as they're available!



To begin adding references to the current bibliography, click
 here.



To generate a searchable .pdf of the current bibliography, simply click on
the PDF tab at the top of the screen in Overleaf. Feel free to share the
Read and Edit link (

https://wordpress.com/page/crhrarchaeology.wordpress.com/89371) with
colleagues and co-workers.



Any and all users can add new references and edit existing references using
 this link.



If you run into any issues, or just have questions, please forward those
along.



I've also added a link to my blog
(https://crhrarchaeology.wordpress.com/morphometrics/gm-bibliography-project
/) where this same text is posted (archaeologists are nothing if not
redundant). Many thanks in advance for your contributions-I think that this
can be a great resource.



Best,

Zac







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Re: [MORPHMET] Crowdsourced GM Bibliography

[Tim Astrop]

Hi All,

Just throwing my support in, I think this is a great idea!

Tim

*Tim Astrop PhD <http://timastrop.wordpress.com/>*
Ammonoid Palaeobiology Lab <http://aplbath.wordpress.com/>
Department of Biology & Biochemistry
University of Bath

On 9 March 2016 at 17:13, Robert Z. Selden, Jr. <selden...@sfasu.edu> wrote:

> This is what a hypothetical community would look like on Zenodo (
> https://zenodo.org/collection/user-gm-data). Users could upload directly
> to that community, or could select the community during the upload process.
>
>
>
> PS – Please don’t upload anything to this community—unless we later decide
> (as a community) to run with Zenodo. If we opt to go a different route,
> I’ll just delete this.
>
>
>
> Best,
>
> Zac
>
>
>
>
>
>
>
> *From:* morphmet@morphometrics.org [mailto:morphmet@morphometrics.org] *On
> Behalf Of *Robert Z. Selden, Jr.
> *Sent:* Wednesday, March 09, 2016 11:00 AM
> *To:* jonathan.hendri...@sjsu.edu
> *Cc:* bonhomme.vinc...@gmail.com; morphmet@morphometrics.org
> *Subject:* RE: [MORPHMET] Crowdsourced GM Bibliography
>
>
>
> Something to ponder…
>
>
>
> It’s free to upload your data to Zenodo (@ CERN), provided each of the
> separate data files (not the combined dataset, but each file) is below 2GB.
> I regularly work with 3D data, and have been able to decimate and compress
> my scans (ASCII.ply) to get well below the 2GB threshold in most cases. See
> an example of a Zenodo community here (
> https://zenodo.org/collection/user-bdnhs-3d
> <https://urldefense.proofpoint.com/v2/url?u=https-3A__zenodo.org_collection_user-2Dbdnhs-2D3d=AwMFaQ=2X_btuPRWkGwRX26NHIotw=BzjivF1QeBfI_3LA2VUN9ft9kB36GKxt8Ke21CMTTJU=yJ4LS_CevV9WDLXe5WBSBh1ULDbPbGf2gxir3ptmf7M=Vvgtq37h0v8bf8-d4jsxfjFGMRhxI9y0SWDqDsOcCes=>).
> I can easily build a community where all of us can store data (or even just
> citations for data; would be up to each user).
>
>
>
> While I do think the pubs may be better (and more easily) cataloged using
> GitHub, data can be a bit more sensitive. With Zenodo, each entry is
> provided with a DOI (or you can enter the DOI from your publication if your
> data was included), and you can select the appropriate Creative Commons
> license for each entry (more on Creative Commons licenses here -
> https://creativecommons.org/licenses/
> <https://urldefense.proofpoint.com/v2/url?u=https-3A__creativecommons.org_licenses_=AwMFaQ=2X_btuPRWkGwRX26NHIotw=BzjivF1QeBfI_3LA2VUN9ft9kB36GKxt8Ke21CMTTJU=yJ4LS_CevV9WDLXe5WBSBh1ULDbPbGf2gxir3ptmf7M=SOt-dO0hqyvs1EJj8aJecDGIkjSjau0fDXxgVcAXy_U=>).
> This ensures that you get credit for generating those data. Additionally,
> if you want to *store* your data, but are reticent to make the actual
> dataset available (because of a pending publication or other sensitive
> issue), Zenodo allows you to embargo datasets (either indefinitely, or for
> a prescribed time period). They’re not the only digital repository out
> there, but it’s the one that I use—so the one I’m most familiar with.
>
>
>
> Anyone else use another repository that might fit our needs as a
> community? Would be ideal if there were no fees for uploading
> data/citations.
>
>
>
> Best,
>
> Zac
>
>
>
>
>
>
>
> *From:* Jonathan Hendricks [mailto:jonathan.hendri...@sjsu.edu
> <jonathan.hendri...@sjsu.edu>]
> *Sent:* Wednesday, March 09, 2016 10:39 AM
> *To:* Robert Z. Selden, Jr. <selden...@sfasu.edu>
> *Cc:* bonhomme.vinc...@gmail.com; morphmet@morphometrics.org
> *Subject:* Re: [MORPHMET] Crowdsourced GM Bibliography
>
>
>
> Dear All,
>
>
>
> I think this is an excellent idea and am also very supportive of the
> establishment of a centralized repository for morphometrics data.
>
>
>
> Best wishes,
>
>
>
> Jon Hendricks
>
>
>
>
>
>
>
>
> --
>
> *Jonathan R. Hendricks*
> Associate Professor, Dept. of Geology, San Jose State University
>
> Research Associate, Paleontological Research Institution
>
> Visiting Research Associate Professor, Dept. of Geological Sciences, Ohio
> University
>
>
>
> 307 Duncan Hall, One Washington Square
>
> San Jose, California 95192-0102
>
> Phone: (408) 924-5279
> E-mail: jonathan.hendri...@sjsu.edu
> Website: http://www.deadsnails.com
> <https://urldefense.proofpoint.com/v2/url?u=http-3A__www.deadsnails.com=AwMFaQ=2X_btuPRWkGwRX26NHIotw=BzjivF1QeBfI_3LA2VUN9ft9kB36GKxt8Ke21CMTTJU=sDgk0U6x-_cbuzj8kwdypDy-KJyHRC6Oe40RHBIEVx0=oRAsAfC3BmgT9QPenfYli_VlaMu3Cpk7pZbSfunADxI=>
>
> ---

Re: [MORPHMET] Crowdsourced GM Bibliography

[Jonathan Hendricks]

Dear All,

I think this is an excellent idea and am also very supportive of the
establishment of a centralized repository for morphometrics data.

Best wishes,

Jon Hendricks



--
*Jonathan R. Hendricks*
Associate Professor, Dept. of Geology, San Jose State University
Research Associate, Paleontological Research Institution
Visiting Research Associate Professor, Dept. of Geological Sciences, Ohio
University

307 Duncan Hall, One Washington Square
San Jose, California 95192-0102

Phone: (408) 924-5279
E-mail: jonathan.hendri...@sjsu.edu
Website: http://www.deadsnails.com
--

-- 
MORPHMET may be accessed via its webpage at http://www.morphometrics.org
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RE: [MORPHMET] Crowdsourced GM Bibliography

[Robert Z. Selden, Jr.]

This is what a hypothetical community would look like on Zenodo 
(https://zenodo.org/collection/user-gm-data). Users could upload directly to 
that community, or could select the community during the upload process. 

 

PS – Please don’t upload anything to this community—unless we later decide (as 
a community) to run with Zenodo. If we opt to go a different route, I’ll just 
delete this. 

 

Best,

Zac

 

 

 

From: morphmet@morphometrics.org [mailto:morphmet@morphometrics.org] On Behalf 
Of Robert Z. Selden, Jr.
Sent: Wednesday, March 09, 2016 11:00 AM
To: jonathan.hendri...@sjsu.edu
Cc: bonhomme.vinc...@gmail.com; morphmet@morphometrics.org
Subject: RE: [MORPHMET] Crowdsourced GM Bibliography

 

Something to ponder…

 

It’s free to upload your data to Zenodo (@ CERN), provided each of the separate 
data files (not the combined dataset, but each file) is below 2GB. I regularly 
work with 3D data, and have been able to decimate and compress my scans 
(ASCII.ply) to get well below the 2GB threshold in most cases. See an example 
of a Zenodo community here (https://zenodo.org/collection/user-bdnhs-3d 
<https://urldefense.proofpoint.com/v2/url?u=https-3A__zenodo.org_collection_user-2Dbdnhs-2D3d=AwMFaQ=2X_btuPRWkGwRX26NHIotw=BzjivF1QeBfI_3LA2VUN9ft9kB36GKxt8Ke21CMTTJU=yJ4LS_CevV9WDLXe5WBSBh1ULDbPbGf2gxir3ptmf7M=Vvgtq37h0v8bf8-d4jsxfjFGMRhxI9y0SWDqDsOcCes=>
 ). I can easily build a community where all of us can store data (or even just 
citations for data; would be up to each user).

 

While I do think the pubs may be better (and more easily) cataloged using 
GitHub, data can be a bit more sensitive. With Zenodo, each entry is provided 
with a DOI (or you can enter the DOI from your publication if your data was 
included), and you can select the appropriate Creative Commons license for each 
entry (more on Creative Commons licenses here - 
https://creativecommons.org/licenses/ 
<https://urldefense.proofpoint.com/v2/url?u=https-3A__creativecommons.org_licenses_=AwMFaQ=2X_btuPRWkGwRX26NHIotw=BzjivF1QeBfI_3LA2VUN9ft9kB36GKxt8Ke21CMTTJU=yJ4LS_CevV9WDLXe5WBSBh1ULDbPbGf2gxir3ptmf7M=SOt-dO0hqyvs1EJj8aJecDGIkjSjau0fDXxgVcAXy_U=>
 ). This ensures that you get credit for generating those data. Additionally, 
if you want to store your data, but are reticent to make the actual dataset 
available (because of a pending publication or other sensitive issue), Zenodo 
allows you to embargo datasets (either indefinitely, or for a prescribed time 
period). They’re not the only digital repository out there, but it’s the one 
that I use—so the one I’m most familiar with. 

 

Anyone else use another repository that might fit our needs as a community? 
Would be ideal if there were no fees for uploading data/citations.

 

Best,

Zac

 

 

 

From: Jonathan Hendricks [mailto:jonathan.hendri...@sjsu.edu] 
Sent: Wednesday, March 09, 2016 10:39 AM
To: Robert Z. Selden, Jr. <selden...@sfasu.edu <mailto:selden...@sfasu.edu> >
Cc: bonhomme.vinc...@gmail.com <mailto:bonhomme.vinc...@gmail.com> ; 
morphmet@morphometrics.org <mailto:morphmet@morphometrics.org> 
Subject: Re: [MORPHMET] Crowdsourced GM Bibliography

 

Dear All,

 

I think this is an excellent idea and am also very supportive of the 
establishment of a centralized repository for morphometrics data.

 

Best wishes,

 

Jon Hendricks

 

 

 

--

Jonathan R. Hendricks
Associate Professor, Dept. of Geology, San Jose State University

Research Associate, Paleontological Research Institution

Visiting Research Associate Professor, Dept. of Geological Sciences, Ohio 
University

 

307 Duncan Hall, One Washington Square

San Jose, California 95192-0102

Phone: (408) 924-5279
E-mail: jonathan.hendri...@sjsu.edu <mailto:jonathan.hendri...@sjsu.edu> 
Website: http://www.deadsnails.com 
<https://urldefense.proofpoint.com/v2/url?u=http-3A__www.deadsnails.com=AwMFaQ=2X_btuPRWkGwRX26NHIotw=BzjivF1QeBfI_3LA2VUN9ft9kB36GKxt8Ke21CMTTJU=sDgk0U6x-_cbuzj8kwdypDy-KJyHRC6Oe40RHBIEVx0=oRAsAfC3BmgT9QPenfYli_VlaMu3Cpk7pZbSfunADxI=>
 
--

-- 
MORPHMET may be accessed via its webpage at http://www.morphometrics.org 
<https://urldefense.proofpoint.com/v2/url?u=http-3A__www.morphometrics.org=AwMFaQ=2X_btuPRWkGwRX26NHIotw=BzjivF1QeBfI_3LA2VUN9ft9kB36GKxt8Ke21CMTTJU=yJ4LS_CevV9WDLXe5WBSBh1ULDbPbGf2gxir3ptmf7M=cl3zfmfIlLbeBUjrE7UhVLNwQ7cuK5RIwOXN7bbnjcg=>
 
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RE: [MORPHMET] Crowdsourced GM Bibliography

[Robert Z. Selden, Jr.]

Something to ponder…

 

It’s free to upload your data to Zenodo (@ CERN), provided each of the separate 
data files (not the combined dataset, but each file) is below 2GB. I regularly 
work with 3D data, and have been able to decimate and compress my scans 
(ASCII.ply) to get well below the 2GB threshold in most cases. See an example 
of a Zenodo community here (https://zenodo.org/collection/user-bdnhs-3d). I can 
easily build a community where all of us can store data (or even just citations 
for data; would be up to each user).

 

While I do think the pubs may be better (and more easily) cataloged using 
GitHub, data can be a bit more sensitive. With Zenodo, each entry is provided 
with a DOI (or you can enter the DOI from your publication if your data was 
included), and you can select the appropriate Creative Commons license for each 
entry (more on Creative Commons licenses here - 
https://creativecommons.org/licenses/). This ensures that you get credit for 
generating those data. Additionally, if you want to store your data, but are 
reticent to make the actual dataset available (because of a pending publication 
or other sensitive issue), Zenodo allows you to embargo datasets (either 
indefinitely, or for a prescribed time period). They’re not the only digital 
repository out there, but it’s the one that I use—so the one I’m most familiar 
with. 

 

Anyone else use another repository that might fit our needs as a community? 
Would be ideal if there were no fees for uploading data/citations.

 

Best,

Zac

 

 

 

From: Jonathan Hendricks [mailto:jonathan.hendri...@sjsu.edu] 
Sent: Wednesday, March 09, 2016 10:39 AM
To: Robert Z. Selden, Jr. <selden...@sfasu.edu>
Cc: bonhomme.vinc...@gmail.com; morphmet@morphometrics.org
Subject: Re: [MORPHMET] Crowdsourced GM Bibliography

 

Dear All,

 

I think this is an excellent idea and am also very supportive of the 
establishment of a centralized repository for morphometrics data.

 

Best wishes,

 

Jon Hendricks

 

 

 

--

Jonathan R. Hendricks
Associate Professor, Dept. of Geology, San Jose State University

Research Associate, Paleontological Research Institution

Visiting Research Associate Professor, Dept. of Geological Sciences, Ohio 
University

 

307 Duncan Hall, One Washington Square

San Jose, California 95192-0102

Phone: (408) 924-5279
E-mail: jonathan.hendri...@sjsu.edu <mailto:jonathan.hendri...@sjsu.edu> 
Website: http://www.deadsnails.com 
<https://urldefense.proofpoint.com/v2/url?u=http-3A__www.deadsnails.com=AwMFaQ=2X_btuPRWkGwRX26NHIotw=BzjivF1QeBfI_3LA2VUN9ft9kB36GKxt8Ke21CMTTJU=sDgk0U6x-_cbuzj8kwdypDy-KJyHRC6Oe40RHBIEVx0=oRAsAfC3BmgT9QPenfYli_VlaMu3Cpk7pZbSfunADxI=>
 
--

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Description: S/MIME cryptographic signature

RE: [MORPHMET] Crowdsourced GM Bibliography

[Robert Z. Selden, Jr.]

Hi Vincent (and community),

 

If you would help me build it (I catch on quickly), I think the GitHub idea 
sounds great.

 

I opted for Overleaf because it’s familiar (for me), and most reference 
managers can generate BibTeX citations, but I do recognize ease of use as a 
significant hurdle. 

 

Let’s give it 96 hours to gestate, get some feedback from the community, and 
then we can dig in. The more collaborative this is, the better. So I guess the 
question—for the community—is how to build a working bibliography that we can 
all contribute to, while making it as easy as possible to add/update citations?

 

I also agree re: data. I use Zenodo (http://zenodo.org/) for my work, but know 
that many folks publish data with their papers. Having a centralized location 
where all of those datasets were listed would be incredible. 

 

So, perhaps we can set up two working bibliographies—one for publications, and 
another for data?

 

Thoughts?

 

Best,

Zac

 

 

From: Vincent Bonhomme [mailto:bonhomme.vinc...@gmail.com] 
Sent: Wednesday, March 09, 2016 10:14 AM
To: Robert Z. Selden, Jr. <selden...@sfasu.edu>
Cc: MORPHMET <morphmet@morphometrics.org>
Subject: Re: [MORPHMET] Crowdsourced GM Bibliography

 

hi there,


that's a great idea!

I think simplicity and ease of adding stuff is key. I love tex but not sure 
it's not a shared feeling among my colleagues. Why not using a simple GitHub 
repository and list papers there in (simpler) Markdown? that would not be 
binded to someone/some structure in particular but built/share by all of us. 
and combined with pandoc we would still be able to generate html, tex, whatever 
we want. 

by the way, I think we could (should?) do the same for data. I'd be very happy 
to discuss it with anyone interested.

all the best,

vincent

 

 

2016-03-09 16:57 GMT+01:00 Robert Z. Selden, Jr. <selden...@sfasu.edu 
<mailto:selden...@sfasu.edu> >:

In an attempt to centralize the large wealth (and breadth) of knowledge 
generated through studies of geometric morphometrics, I thought that we might 
all collaborate on a working bibliography. And since geometric morphometrics is 
comprised of a fairly tight-knit international community, why not make this a 
crowdsourced project?

 

Since the great majority of practitioners are familiar–at least 
peripherally–with scripting, the bibliography is maintained in BibTeX, and can 
be edited in Overleaf. Additionally, using the field “annote,” the abstracts 
for each paper can be included. Further still, the BibTeX text in the GMBib.bib 
file can be cut, then pasted into a text file, where it can be imported to a 
number of reference and .pdf managers.

 

I do ask that if you add a citation, you follow the current (BibTeX) format, 
and also place each new reference in alphabetical order (let Overleaf refresh 
after each entry to ensure there are no errors). This will help us to ensure 
that we are not duplicating citations that have already been added. 
Additionally, if you have more information (abstract, DOI, etc.) for a 
reference in the bibliography that is currently posted, please add that 
information.

 

The goal of this endeavor is to maintain an active (and accurate) list of 
publications related to geometric morphometrics that can be used in classrooms, 
laboratories, and–yes–your own personal reference manager, and to have it 
maintained by the community of practitioners. So please add your new 
publications as soon as they’re available!

 

To begin adding references to the current bibliography, click  
<https://urldefense.proofpoint.com/v2/url?u=https-3A__www.overleaf.com_4563493vqjzwm=AwMFaQ=2X_btuPRWkGwRX26NHIotw=BzjivF1QeBfI_3LA2VUN9ft9kB36GKxt8Ke21CMTTJU=QNP01JmHEc_WRoQmcPuxbKJL-Wua_b_jbmUMu7vUObM=s8pWacini3l7LzIlPTsnNU9CyaUPBB76_egZSmeH6jE=>
 here.

 

To generate a searchable .pdf of the current bibliography, simply click on the 
PDF tab at the top of the screen in Overleaf. Feel free to share the Read and 
Edit link ( 
<https://urldefense.proofpoint.com/v2/url?u=https-3A__wordpress.com_page_crhrarchaeology.wordpress.com_89371=AwMFaQ=2X_btuPRWkGwRX26NHIotw=BzjivF1QeBfI_3LA2VUN9ft9kB36GKxt8Ke21CMTTJU=QNP01JmHEc_WRoQmcPuxbKJL-Wua_b_jbmUMu7vUObM=7h9PVI7HCVvOYFzNj7Uu9Tu0PIV4ImFKrKsnaZKUTkU=>
 https://wordpress.com/page/crhrarchaeology.wordpress.com/89371) with 
colleagues and co-workers.

 

Any and all users can add new references and edit existing references using  
<https://urldefense.proofpoint.com/v2/url?u=https-3A__wordpress.com_page_crhrarchaeology.wordpress.com_89371=AwMFaQ=2X_btuPRWkGwRX26NHIotw=BzjivF1QeBfI_3LA2VUN9ft9kB36GKxt8Ke21CMTTJU=QNP01JmHEc_WRoQmcPuxbKJL-Wua_b_jbmUMu7vUObM=7h9PVI7HCVvOYFzNj7Uu9Tu0PIV4ImFKrKsnaZKUTkU=>
 this link.

 

If you run into any issues, or just have questions, please forward those along.

 

I’ve also added a link to my blog 
(https://crhrarchaeology.wordpress.com/morphometrics/gm-bibliography-project/ 
<htt

Re: [MORPHMET] Crowdsourced GM Bibliography

[Vincent Bonhomme]

hi there,

that's a great idea!
I think simplicity and ease of adding stuff is key. I love tex but not sure
it's not a shared feeling among my colleagues. Why not using a simple
GitHub repository and list papers there in (simpler) Markdown? that would
not be binded to someone/some structure in particular but built/share by
all of us. and combined with pandoc we would still be able to generate
html, tex, whatever we want.

by the way, I think we could (should?) do the same for data. I'd be very
happy to discuss it with anyone interested.

all the best,

vincent



2016-03-09 16:57 GMT+01:00 Robert Z. Selden, Jr. :

> In an attempt to centralize the large wealth (and breadth) of knowledge
> generated through studies of geometric morphometrics, I thought that we
> might all collaborate on a working bibliography. And since geometric
> morphometrics is comprised of a fairly tight-knit international community, 
> *why
> not* make this a crowdsourced project?
>
>
>
> Since the great majority of practitioners are familiar–at least
> peripherally–with scripting, the bibliography is maintained in BibTeX, and
> can be edited in Overleaf. Additionally, using the field “annote,” the
> abstracts for each paper can be included. Further still, the BibTeX text in
> the GMBib.bib file can be cut, then pasted into a text file, where it can
> be imported to a number of reference and .pdf managers.
>
>
>
> I do ask that if you add a citation, you follow the current (BibTeX)
> format, and also place each new reference in alphabetical order (let
> Overleaf refresh after each entry to ensure there are no errors). This will
> help us to ensure that we are not duplicating citations that have already
> been added. Additionally, if you have more information (abstract, DOI,
> etc.) for a reference in the bibliography that is currently posted, please
> add that information.
>
>
>
> The goal of this endeavor is to maintain an active (and accurate) list of
> publications related to geometric morphometrics that can be used in
> classrooms, laboratories, and–yes–your own personal reference manager, and
> to have it maintained by the community of practitioners. So please add your
> new publications as soon as they’re available!
>
>
>
> To begin adding references to the current bibliography, click here
> .
>
>
>
> To generate a searchable .pdf of the current bibliography, simply click on
> the PDF tab at the top of the screen in Overleaf. Feel free to share the *Read
> and Edit* link (
> https://wordpress.com/page/crhrarchaeology.wordpress.com/89371) with
> colleagues and co-workers.
>
>
>
> Any and all users can add new references and edit existing references
> using this link
> .
>
>
>
> If you run into any issues, or just have questions, please forward those
> along.
>
>
>
> I’ve also added a link to my blog (
> https://crhrarchaeology.wordpress.com/morphometrics/gm-bibliography-project/)
> where this same text is posted (archaeologists are nothing if not
> redundant). Many thanks in advance for your contributions—I think that this
> can be a great resource.
>
>
>
> Best,
>
> Zac
>
>
>
>
>
>
>
> --
> MORPHMET may be accessed via its webpage at http://www.morphometrics.org
> ---
> You received this message because you are subscribed to the Google Groups
> "MORPHMET" group.
> To unsubscribe from this group and stop receiving emails from it, send an
> email to morphmet+unsubscr...@morphometrics.org.
>



-- 
vincentbonhomme.fr 

-- 
MORPHMET may be accessed via its webpage at http://www.morphometrics.org
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[MORPHMET] Crowdsourced GM Bibliography

[Robert Z. Selden, Jr.]

In an attempt to centralize the large wealth (and breadth) of knowledge
generated through studies of geometric morphometrics, I thought that we
might all collaborate on a working bibliography. And since geometric
morphometrics is comprised of a fairly tight-knit international community,
why not make this a crowdsourced project?

 

Since the great majority of practitioners are familiar-at least
peripherally-with scripting, the bibliography is maintained in BibTeX, and
can be edited in Overleaf. Additionally, using the field "annote," the
abstracts for each paper can be included. Further still, the BibTeX text in
the GMBib.bib file can be cut, then pasted into a text file, where it can be
imported to a number of reference and .pdf managers.

 

I do ask that if you add a citation, you follow the current (BibTeX) format,
and also place each new reference in alphabetical order (let Overleaf
refresh after each entry to ensure there are no errors). This will help us
to ensure that we are not duplicating citations that have already been
added. Additionally, if you have more information (abstract, DOI, etc.) for
a reference in the bibliography that is currently posted, please add that
information.

 

The goal of this endeavor is to maintain an active (and accurate) list of
publications related to geometric morphometrics that can be used in
classrooms, laboratories, and-yes-your own personal reference manager, and
to have it maintained by the community of practitioners. So please add your
new publications as soon as they're available!

 

To begin adding references to the current bibliography, click
 here.

 

To generate a searchable .pdf of the current bibliography, simply click on
the PDF tab at the top of the screen in Overleaf. Feel free to share the
Read and Edit link (

https://wordpress.com/page/crhrarchaeology.wordpress.com/89371) with
colleagues and co-workers.

 

Any and all users can add new references and edit existing references using
 this link.

 

If you run into any issues, or just have questions, please forward those
along.

 

I've also added a link to my blog
(https://crhrarchaeology.wordpress.com/morphometrics/gm-bibliography-project
/) where this same text is posted (archaeologists are nothing if not
redundant). Many thanks in advance for your contributions-I think that this
can be a great resource.

 

Best,

Zac

 

 

 

-- 
MORPHMET may be accessed via its webpage at http://www.morphometrics.org
--- 
You received this message because you are subscribed to the Google Groups 
"MORPHMET" group.
To unsubscribe from this group and stop receiving emails from it, send an email 
to morphmet+unsubscr...@morphometrics.org.


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