ADL parser

2006-08-31 Thread Thomas Beale
minreddy minreddy wrote:
 Hi

 'GUI Archetype Editor uses Eiffel reference ADL parser' as stated in 
 this page 
 http://svn.openehr.org/knowledge_tools_java/TRUNK/project_page.htm

 Is there any ADL parser written in Java?
 Is anybody working on that?

there is; Rong Chen has commented on that. But you might want to make 
the Eiffel parser and workbench compile on Linux, if interested. I have 
made it build for MacOSX and it works, but there are a few visual 
gremlins and install issues that need to be solved and I don't have the 
time. The same will happen on Linux - but no source will need to be 
changed. And plus Eiffel is a lot of fun to work with.

- thomas beale





Normal and other ranges

2006-08-31 Thread Thomas Beale

Hi Rodrigo,

Rodrigo Filgueira wrote:
 I see DV_ORDERED can optionally have specified normal and other ranges.
 While the other ranges are said to be dependant on the measuring context.
 normal range it seems to me, coud be defined as allways the same?
   
not sure what you mean here.
 I'm thinking about laboratory resullts.

 Anyway, is there a way to define this ranges in Archetypes?
   
technically there is nothing stopping it, but it would almost always be 
the wrong thing to do, since the normal range of a Quantity is there to 
carry the actual normal range for the particular analyte in question, 
for the lab, and for the patient. So if it is serum sodium, the range 
will still depend on all of these things, and cannot be archetyped. The 
intention is not to use archetypes to standardise these values, but to 
provide a place for labs to put the specific normal range values that 
applied for each analyte, for the particular patient, and remembering 
that each lab has slightly different instrument settings.

Probably what you are looking for is the normal range reference data - 
like what you see in a pathology book, or what any physician knows for 
all of the main vital signs and other measurable things. We consider 
this to be reference information, like terminology, but for quantified 
values. While much of it is published in paper form, as far as I know 
there is no recognised way to represent quantitative range data in a 
standard computable form (i.e. in the way that you can get Snomed or 
ICD10 in a computable format). This is needed. But archetypes are not 
the place to standardise this - archetypes are about defining content 
structures, not domain reference knowledge.

- thomas beale
 Or should a decission support module be responsible for this?

 thank you

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Normal and other ranges

2006-08-31 Thread Gerard Freriks
Hi,

My personal thoughts.

In general the normal range is dependent on the type of lab method  
and specific lab and valid in a particular context (male, female,  
old, young, time, etc)
So the information can be provided by the lab only. They know (should  
know) what all the normal ranges in all relevant contexts are.

Of course for the purpose of providing lab results archetypes will be  
produced.
In these lab-reporting archetypes there must be a spot where this  
type of information can be provided.

IT techies think many times that absolute figures are very important.
In general trends provide more useful information than single  
absolute figures

Gerard

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Gerard.Freriks at TNO.nl





On 31-aug-2006, at 19:20, Thomas Beale wrote:


 technically there is nothing stopping it, but it would almost  
 always be the wrong thing to do, since the normal range of a  
 Quantity is there to carry the actual normal range for the  
 particular analyte in question, for the lab, and for the patient.  
 So if it is serum sodium, the range will still depend on all of  
 these things, and cannot be archetyped. The intention is not to use  
 archetypes to standardise these values, but to provide a place for  
 labs to put the specific normal range values that applied for each  
 analyte, for the particular patient, and remembering that each lab  
 has slightly different instrument settings.

 Probably what you are looking for is the normal range reference  
 data - like what you see in a pathology book, or what any physician  
 knows for all of the main vital signs and other measurable things.  
 We consider this to be reference information, like terminology, but  
 for quantified values. While much of it is published in paper form,  
 as far as I know there is no recognised way to represent  
 quantitative range data in a standard computable form (i.e. in the  
 way that you can get Snomed or ICD10 in a computable format). This  
 is needed. But archetypes are not the place to standardise this -  
 archetypes are about defining content structures, not domain  
 reference knowledge.

 - thomas beale

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