Re: [Paraview] 3.8 RC2 binaries: still a bug in line charts

2010-05-11 Thread Richard GRENON

Marcus D. Hanwell wrote:
On Mon, May 10, 2010 at 4:54 AM, Richard GRENON 
richard.gre...@onera.fr mailto:richard.gre...@onera.fr wrote:


Hello

I have just tested the 3.8 RC2 binaries (Linux 64). If some 3.8
RC1 bugs have been solved in line charts (points 1 and 2 in my
previous mail about 3.8 RC1 regression in line chart), it is still
impossible to change the default bottom-left axis system for
another system with top or right axis.

Hi Richard,

I committed some fixes for this in ParaView/VTK master, the commit IDs 
are in the bug report notes,


http://www.paraview.org/Bug/view.php?id=10387

The patch is quite big, and so we will have to wait until the 3.8.2 
release to integrate them (it will be one of the first changes to be 
merged after the final tagging for ParaView). So in the short term I 
will remove those elements from the display panel for the line charts, 
and add them back in once the 3.8 branch has tagged.


It was necessary to refactor quite a lot of the logic in the 
vtkChartXY class to deal with effectively having four plots in each 
chart, manage four transforms, and sharing axes between the up to four 
plots. Please let me know if you experience further issues after 
applying the changes.


Thanks,

Marcus
--
Marcus D. Hanwell, Ph.D.
RD Engineer, Kitware Inc.
(518) 881-4937 

Hi Marcus.

Thank you for this answer. I will wait for the 3.8.2 release before 
testing line chart again and I will continue to test other features in 
3.8.0 RC2.


Richard

--
Richard GRENON
ONERA
Departement d'Aerodynamique Appliquee - DAAP/ACI
8 rue des Vertugadins
92190 MEUDON - FRANCE
phone : +33 1 46 73 42 17
fax   : +33 1 46 73 41 46
mailto:richard.gre...@onera.fr
http://www.onera.fr

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Re: [Paraview] XDMF/HDF5 reader memory usage

2010-05-11 Thread Tobias Brandvik
After doing some more digging, it appears this problem is not only
related to temporal collections, but all XDMF/HDF5 files with spatial
collections. If repeatedly open and close a file containing a spatial
collection, Paraview's memory usage gradually increases until it hangs
my machine. I observe this in both 3.6 and 3.8 RC2.

Cheers,
Tobias

---
Tobias Brandvik
PhD Student
Whittle Laboratory, University of Cambridge
1 JJ Thomson Avenue
Cambridge CB3 0DY, UK


On Mon, May 3, 2010 at 12:06 PM, Tobias Brandvik tbrand...@gmail.com wrote:
 Hi all,

 I'm experiencing some strange behaviour with the XDMF reader when
 trying to create an animation of the data contained in a set of HDF5
 files. My approach is as follows:

 1. One XDMF file which is a temporal collection containing links to a
 list of other XDMF files
 2. One XDMF file for each time step (linked to by the XDMF file
 above), each of which is a spatial collection of several 2D structured
 grids. The data for the grids is contained in HDF5 files (also one for
 each time step).

 When I open the file with the temporal collection in Paraview, the
 data shows up as a temporal collection as expected. I can step back
 and forth in time and everything seems to work just fine. However, as
 I load in more time steps (by stepping forward in time), Paraview's
 memory usage keeps increasing. It seems like it is not freeing the
 memory associated with the old time step when reading in a new one.

 To illustrate this problem, I've uploaded a collection of XDMF and
 HDF5 files to the following location:

 http://www2.eng.cam.ac.uk/~tb302/xdmf_example.tar.gz

 There are 10 time steps in the collection. The data set is very small,
 but it should still show the problem (I could easily generate larger
 data sets if necessary). I get the same behaviour in Paraview 3.6 and
 3.8 on both Centos 5.3 (64 bit) and Mac OS X 10.5.

 Any help would be greatly appreciated.

 Best wishes,
 Tobias

 ---
 Tobias Brandvik
 PhD Student
 Whittle Laboratory, University of Cambridge
 1 JJ Thomson Avenue
 Cambridge CB3 0DY, UK

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Re: [Paraview] XDMF/HDF5 reader memory usage

2010-05-11 Thread Tobias Brandvik
Sure, bug now submitted:

http://paraview.org/Bug/view.php?id=10702

Thanks,
Tobias

On Tue, May 11, 2010 at 1:59 PM, Robert Maynard
robert.mayn...@kitware.com wrote:
 Hi Tobias,
 Could you please submit a bug
 at http://paraview.org/Bug/bug_report_page.php for the memory leak in
 XMDF/HDF5 files.

 On Tue, May 11, 2010 at 8:19 AM, Tobias Brandvik tbrand...@gmail.com
 wrote:

 After doing some more digging, it appears this problem is not only
 related to temporal collections, but all XDMF/HDF5 files with spatial
 collections. If repeatedly open and close a file containing a spatial
 collection, Paraview's memory usage gradually increases until it hangs
 my machine. I observe this in both 3.6 and 3.8 RC2.

 Cheers,
 Tobias

 ---
 Tobias Brandvik
 PhD Student
 Whittle Laboratory, University of Cambridge
 1 JJ Thomson Avenue
 Cambridge CB3 0DY, UK


 On Mon, May 3, 2010 at 12:06 PM, Tobias Brandvik tbrand...@gmail.com
 wrote:
  Hi all,
 
  I'm experiencing some strange behaviour with the XDMF reader when
  trying to create an animation of the data contained in a set of HDF5
  files. My approach is as follows:
 
  1. One XDMF file which is a temporal collection containing links to a
  list of other XDMF files
  2. One XDMF file for each time step (linked to by the XDMF file
  above), each of which is a spatial collection of several 2D structured
  grids. The data for the grids is contained in HDF5 files (also one for
  each time step).
 
  When I open the file with the temporal collection in Paraview, the
  data shows up as a temporal collection as expected. I can step back
  and forth in time and everything seems to work just fine. However, as
  I load in more time steps (by stepping forward in time), Paraview's
  memory usage keeps increasing. It seems like it is not freeing the
  memory associated with the old time step when reading in a new one.
 
  To illustrate this problem, I've uploaded a collection of XDMF and
  HDF5 files to the following location:
 
  http://www2.eng.cam.ac.uk/~tb302/xdmf_example.tar.gz
 
  There are 10 time steps in the collection. The data set is very small,
  but it should still show the problem (I could easily generate larger
  data sets if necessary). I get the same behaviour in Paraview 3.6 and
  3.8 on both Centos 5.3 (64 bit) and Mac OS X 10.5.
 
  Any help would be greatly appreciated.
 
  Best wishes,
  Tobias
 
  ---
  Tobias Brandvik
  PhD Student
  Whittle Laboratory, University of Cambridge
  1 JJ Thomson Avenue
  Cambridge CB3 0DY, UK
 
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[Paraview] Manta Download

2010-05-11 Thread Natalie Happenhofer

Hi everybody,

I'm looking for a Manta download to build use the Plugin in ParaView 3.8.0, but 
I can't find it anywhere. Could anyone mail me a link? 

Thanks,
Natalie
  
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Re: [Paraview] Manta Download

2010-05-11 Thread Sebastien Jourdain
Hi Natalie,

You should be able to find what you are looking for in that web page.

http://mantawiki.sci.utah.edu/manta/index.php/Main_Page

Seb

On Tue, May 11, 2010 at 9:37 AM, Natalie Happenhofer 
natalieh...@hotmail.com wrote:

  Hi everybody,

 I'm looking for a Manta download to build use the Plugin in ParaView 3.8.0,
 but I can't find it anywhere. Could anyone mail me a link?

 Thanks,
 Natalie

 --
 Subir, organizar y compartir documentos online, está a un clic de tu
 bandeja de entrada. Ver 
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Re: [Paraview] Manta Download

2010-05-11 Thread Natalie Happenhofer

Great, thanks!

N

Date: Tue, 11 May 2010 09:51:06 -0400
Subject: Re: [Paraview] Manta Download
From: sebastien.jourd...@kitware.com
To: natalieh...@hotmail.com
CC: paraview@paraview.org

Hi Natalie, 

You should be able to find what you are looking for in that web page.

http://mantawiki.sci.utah.edu/manta/index.php/Main_Page


Seb

On Tue, May 11, 2010 at 9:37 AM, Natalie Happenhofer natalieh...@hotmail.com 
wrote:






Hi everybody,

I'm looking for a Manta download to build use the Plugin in ParaView 3.8.0, but 
I can't find it anywhere. Could anyone mail me a link? 

Thanks,
Natalie
  
Subir, organizar y compartir documentos online, está a un clic de tu bandeja de 
entrada.  Ver más


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Re: [Paraview] Branding branch

2010-05-11 Thread A M
As you suggested, I added the dll path (ParaView-3.8.0-bin\bin\Debug) to the
environment variable as well as the Qt path, however when I ran the .exe
file again I got the same error, so I added the dll files manually to the
same directory as the .exe file, at first was asking about some Paraview
dlls and the some Qt dlls (I have both of this added to the use path
enviroment variable!) and then asked form some vtk dlls, the last error
which I can not get passed of is asking for vtkCommon.dll, I added the dll
to the directory and  I got this:

 the procedure entry point ?computepointforext...@vtkstructureddata
@@saq...@z could not be located in the dynamic library link vtkCommon.dll
!

I run on WinXP SP3,  visual studio 9 2008 and the latest version of Paraview
and Qt

as I mentioned I added all the paths to all this dlls to the user
environment variable but somehow the system does not see this dlls!!!  and
it will be really inconvenient to add all this dlls every time you write a
software and want to run it!

any help is really appreciated!

best
~Sam


On Mon, May 10, 2010 at 12:31 PM, Utkarsh Ayachit 
utkarsh.ayac...@kitware.com wrote:

 When you are running on windows, windows expects that all the dlls are
 in PATH (or the same location as the exe). You may want to start the
 clone executable from a terminal ensuring that you set the PATH
 environment variable correctly to point to the dlls under the ParaView
 build dir.

 Utkarsh

 On Mon, May 10, 2010 at 12:26 PM, A M ars...@uga.edu wrote:
  thanks Utkarsh
 
  The page you suggested cleared some stuff for me!
  As David suggested I tried to look at the examples under
  Examples\CustomApplications directory in the paraview source. I CMake'd
 the
  examples there such as Clone12 and Demo01 and tried to run them to see
 how
  they work (That would be a good working example to understand the process
  better), the projects compiled just fine but when I tried to run them I
 got
  the following two errors for Clone and Demo respectively:
  pqapplicationcomponents.dll was not found, re-installing the application
  may fix this problem
  pqCore.dll was not found, re-installing the application may fix this
  problem
 
  anyone has any idea what I did wrong here! what are these two dll files?
 
  best
  ~sam
 
  On Sun, May 9, 2010 at 11:02 PM, Utkarsh Ayachit
  utkarsh.ayac...@kitware.com wrote:
 
  You might also want to refer to the following wiki page details on the
  custom application components:
  http://paraview.org/Wiki/Writing_Custom_Applications
 
  Utkarsh
 
  On Sun, May 9, 2010 at 9:48 PM, David E DeMarle
  dave.dema...@kitware.com wrote:
   Since that time, the branding infrastructure has merged from Utkarsh's
   bleeding edge repository mentioned in the paper, into the ParaView
   development branch, and then into the 3.8 release of ParaView.
  
   So just follow instructions from www.paraview.org to get the ParaView
   source, either 3.8 or current developement from git and use that make
   your own custom applications.
  
   In particular, the sample applications mentioned in the presentation
   that accompanied the paper are under the Examples/Applications
   directory.
  
   David E DeMarle
   Kitware, Inc.
   RD Engineer
   28 Corporate Drive
   Clifton Park, NY 12065-8662
   Phone: 518-371-3971 x109
  
  
  
   On Sun, May 9, 2010 at 9:33 PM, A M ars...@uga.edu wrote:
  
   Hi
   I sent the following email to Paraview mailing list and someone just
   answered back the the github was obsolete!! can you please guid me in
 a
   right direction to download the correct source for the purpose of
   Customizing Paraview please. is there any tutorial I can look in to?
  
   best
   Sam
  
   Hi!
  
   So I am a little confused! I read a paper by Utkarsh A. Ayachit and
 in
   this
   paper he mentioned to clone the repository at
   git://github.com/utkarshayachit/ParaView.git to obtain the modified
   ParaView
   source, up to here it is just fine, I can clone the directory just
   fine.
   Then he goes on and and says the The branding code is on the
 Branding
   branch, and a new reference application, called
   paraview_revamed will be found in Applications/Client2 that is what I
   can
   NOT find. where is this branding branch exactly and how can I
 download
   the
   rest of what he is talking about? Does anyone knows?
  
   I looked at   http://github.com/utkarshayachit/ParaView the ParaView
   code is
   there but I didn't see anything called branding branch! Can anyone
 help
   me
   please!
  
   Best!
   ~sam
  
  
  
  
  
 
 
 

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Re: [Paraview] Branding branch

2010-05-11 Thread Eric E. Monson
Hey Sam,

Instead of trying to build those branded applications separately, did you try 
first to build ParaView with BUILD_EXAMPLES: ON and see if those applications 
are built correctly and run okay?

I'm not really a Windows developer, either, but I've been able to build Release 
versions of the Example applications and my own branded app on Windows 7 
64-bit. (I run them from the bin/Release directory under my build directory.) I 
used Qt 4.6.2 that I compiled myself with VS 64-bit compiler, Visual Studio 
2008 Pro, CMake 2.8.1 and Python 2.6.

My PATH variable is very minimal, I think only the Qt library entry is used to 
help configure the ParaView build:

%USERPROFILE%\Programming\qt-everywhere-opensource-src-4.6.2\lib;C:\Program 
Files (x86)\CMake 2.8\bin;C:\Python26;C:\Program Files (x86)\VTK\bin

(the VTK part at the end is just so my separate vtk python stuff runs okay)

Sorry to hear you're having so much trouble. All of us run into these strange 
things sometimes, but just so you know, it should work without any manual 
copying of libraries, etc.

Good luck,
-Eric

--
Eric E Monson
Duke Visualization Technology Group


On May 11, 2010, at 1:05 PM, Dave Partyka wrote:

 To set the PATH when debugging from the IDE:
 
 1. Right click the project and select Properties
 2. In the tree view on the left select Debugging
 3. In the main panel there will be an entry called 'Environment'
 4. Set the Path by entering something like:
 
 PATH=C:\Path\To\Something;%PATH%
 
 On Tue, May 11, 2010 at 12:28 PM, Utkarsh Ayachit 
 utkarsh.ayac...@kitware.com wrote:
 Well, unfortunately, the DLL mess is a Windows OS thing. I am not a
 regular Windows developer so I cannot tell you exactly how to access
 that option, but Visual Studio does have an option somewhere that
 allows you to specify the environment in which the application is
 running. There you can set the PATH to include the ParaView bin/debug
 (or bin/release as the case maybe) and Qt dirs.
 
 You might want to download dependency walker
 (http://www.dependencywalker.com/), a handy utility to determine
 exactly what dlls are being used/not found etc. Use this to ensure
 that correct versions of the dlls are being imported.
 
 I'd refrain from copying over dlls, this often leads to user-related
 errors down the line.
 
 As far as the missing symbol error goes, it's possible your program is
 accidentally bringing in a mismatched vtkCommon dll. Do you have other
 VTK / ParaView builds in your PATH? Use the dependency walker to
 ensure that it's using the correct vtkCOmmon (and other) dlls.
 
 Hope that helps.
 
 Utkarsh
 
 
 On Tue, May 11, 2010 at 3:17 PM, A M ars...@uga.edu wrote:
 
  As you suggested, I added the dll path (ParaView-3.8.0-bin\bin\Debug) to the
  environment variable as well as the Qt path, however when I ran the .exe
  file again I got the same error, so I added the dll files manually to the
  same directory as the .exe file, at first was asking about some Paraview
  dlls and the some Qt dlls (I have both of this added to the use path
  enviroment variable!) and then asked form some vtk dlls, the last error
  which I can not get passed of is asking for vtkCommon.dll, I added the dll
  to the directory and  I got this:
 
   the procedure entry point
  ?computepointforext...@vtkstructureddata@@saq...@z could not be located in
  the dynamic library link vtkCommon.dll !
 
  I run on WinXP SP3,  visual studio 9 2008 and the latest version of Paraview
  and Qt
 
  as I mentioned I added all the paths to all this dlls to the user
  environment variable but somehow the system does not see this dlls!!!  and
  it will be really inconvenient to add all this dlls every time you write a
  software and want to run it!
 
  any help is really appreciated!
 
  best
  ~Sam
 
 
  On Mon, May 10, 2010 at 12:31 PM, Utkarsh Ayachit
  utkarsh.ayac...@kitware.com wrote:
 
  When you are running on windows, windows expects that all the dlls are
  in PATH (or the same location as the exe). You may want to start the
  clone executable from a terminal ensuring that you set the PATH
  environment variable correctly to point to the dlls under the ParaView
  build dir.
 
  Utkarsh
 
  On Mon, May 10, 2010 at 12:26 PM, A M ars...@uga.edu wrote:
   thanks Utkarsh
  
   The page you suggested cleared some stuff for me!
   As David suggested I tried to look at the examples under
   Examples\CustomApplications directory in the paraview source. I CMake'd
   the
   examples there such as Clone12 and Demo01 and tried to run them to see
   how
   they work (That would be a good working example to understand the
   process
   better), the projects compiled just fine but when I tried to run them I
   got
   the following two errors for Clone and Demo respectively:
   pqapplicationcomponents.dll was not found, re-installing the
   application
   may fix this problem
   pqCore.dll was not found, re-installing the application 

Re: [Paraview] Contours of streamlines crashing

2010-05-11 Thread David Borland
I played around with this some more.  Looks like I *can* replicate it 
with RectGrid2.vtk


I'm using the regular Stream Tracer with a Point Source (not the Custom 
Source version with a Mask Points input), and changing the number of 
points to 10.  Then applying a Contour filter on the Integration Time to 
generate particles.


This works fine for the default settings of the Stream Tracer.  However, 
 if I change the Maximum Error to 1e-10, it crashes (again, only when 
attached to a Contour Filter).


This is beginning to make some sense to me (I think).  Because 
Runge-Kutta 4-5 is an adaptive integrator, the step size is decreased to 
 match the error.


Something similar must have been happening with my other data set, but 
because the scale of the data was different, a different Maximum Error 
was causing the crash.  I think the Contour Filter is having issues when 
individual points on the streamlines are too close together.


I've attached a python trace that works.  However, changing the Maximum 
Error to 1e-10 causes a crash.


Here is the location in the ContourFilter that is causing problems:

#12 0x7fffe7b66f93 in vtkContourFilter::RequestData (this=0x23f58e0, 
request=0x21ce010, inputVector=0x238cc90, outputVector=0x2387d60)
at 
/home/borland/dev/ParaView-3.8.0-RC2/VTK/Graphics/vtkContourFilter.cxx:549

549 cellScalars-Delete();






Favre Jean wrote:


From: David Borland [borl...@renci.org]
Sent: Monday, May 10, 2010 5:38 PM
To: Favre  Jean
Cc: Zhanping Liu; paraview@paraview.org
Subject: Re: [Paraview] Contours of streamlines crashing

Yes, looks like I can't replicate it with RectGrid.vtk either.  However
I have been able to replicate it with bluntfin.vts...


bluntfin.vts works just fine for me. So I can't help unless you tell us with a 
debugger, where you see a crash. Send your script using the bluntfin.vts file.

Jean
CSCS
try: paraview.simple
except: from paraview.simple import *

RenderView1 = CreateRenderView()
RenderView1.LightSpecularColor = [1.0, 1.0, 1.0]
RenderView1.UseLight = 1
RenderView1.CameraPosition = [-3.2065235290709602, -4.565219104964509, 3.087175448627677]
RenderView1.FillLightKFRatio = 3.0
RenderView1.Background2 = [1.0, 1.0, 1.0]
RenderView1.FillLightAzimuth = -10.0
RenderView1.LODResolution = 50
RenderView1.BackgroundTexture = []
RenderView1.KeyLightAzimuth = 10.0
RenderView1.LightIntensity = 1.0
RenderView1.CameraFocalPoint = [0.36363797371411538, 0.55933803911889179, 0.12688897916569253]
RenderView1.RenderInterruptsEnabled = 0
RenderView1.CameraParallelScale = 1.788857840667518
RenderView1.EyeAngle = 2.0
RenderView1.HeadLightKHRatio = 3.0
RenderView1.UseTriangleStrips = 0
RenderView1.StereoRender = 0
RenderView1.CameraViewAngle = 30.0
RenderView1.KeyLightIntensity = 0.75
RenderView1.BackLightAzimuth = 110.0
RenderView1.UseTexturedBackground = 0
RenderView1.Background = [0.0, 0.0, 0.0]
RenderView1.UseOffscreenRenderingForScreenshots = 0
RenderView1.CenterOfRotation = [-0.026040017604827881, 0.0, 0.4498807907104]
RenderView1.CameraParallelProjection = 0
RenderView1.CameraViewUp = [0.21769499677299659, 0.37005329560960926, 0.90314420044003629]
RenderView1.HeadLightWarmth = 0.5
RenderView1.MaximumNumberOfPeels = 4
RenderView1.LightDiffuseColor = [1.0, 1.0, 1.0]
RenderView1.StereoType = 'Red-Blue'
RenderView1.DepthPeeling = 0
RenderView1.BackLightKBRatio = 3.5
RenderView1.UseImmediateMode = 1
RenderView1.LightAmbientColor = [1.0, 1.0, 1.0]
RenderView1.KeyLightElevation = 50.0
RenderView1.MaintainLuminance = 0
RenderView1.BackLightWarmth = 0.5
RenderView1.FillLightElevation = -75.0
RenderView1.FillLightWarmth = 0.40002
RenderView1.LightSwitch = 0
RenderView1.UseGradientBackground = 0
RenderView1.CameraClippingRange = [2.6363959942795665, 10.604070430090523]
RenderView1.BackLightElevation = 0.0
RenderView1.ViewTime = 0.0
RenderView1.LODThreshold = 1.0001e+299
RenderView1.KeyLightWarmth = 0.59998

RectGrid2_vtk = LegacyVTKReader( guiName=RectGrid2.vtk, FileNames=['/home/borland/data/ParaViewData-3.8.0-RC2/Data/RectGrid2.vtk'] )

StreamTracer1 = StreamTracer( guiName=StreamTracer1, SeedType=Point Source, IntegrationStepUnit='Cell Length', MaximumError=9.9995e-07, IntegratorType='Runge-Kutta 4-5', MaximumStepLength=0.5, InitialStepLength=0.20001, Vectors=['POINTS', 'vectors'], TerminalSpeed=9.9998e-13, IntegrationDirection='BOTH', MaximumSteps=2000, InterpolatorType='Interpolator with Point Locator', MinimumStepLength=0.01, MaximumStreamlineLength=2.5 )

Contour1 = Contour( guiName=Contour1, Isosurfaces=[3.2370521547272801], PointMergeMethod=Don't Merge Points, ComputeNormals=0, ComputeGradients=0, ComputeScalars=1, ContourBy=['POINTS', 'IntegrationTime'] )

a1_scalars_PiecewiseFunction = CreatePiecewiseFunction( Points=[0.0, 0.0, 1.0, 1.0] )

a1_scalars_PVLookupTable = GetLookupTableForArray( 

Re: [Paraview] Mac branded packaging

2010-05-11 Thread Eric E. Monson
Hey again,

Okay, so I was able to solve #1: There was a cmake variable that wasn't set 
(i.e. wasn't carried over from the ParaView build) so the bundle-fixing script 
wasn't looking in the right spot for the Python libraries.

If someone could still help me with the conceptual question in #2 I'd really 
appreciate it. I would like my users to be able to generate batch animations 
with pvpython. In my branded app I hard-code my custom plugins into my main 
window class, and the python shell within PV automatically knows about my 
custom filters, but I'm not clear on what it takes to get pvpython to know 
about those custom filters, too.

So, sorry this sounds so ignorant, but is it possible to build a version of 
pvpython that will already have my custom filters built in? Or, will I always 
have to do an explicit LoadPlugin(), in which case I can just use the standard 
procedure for packaging the server executables, but also include my custom 
plugin libraries along with the standard PV ones.

Thanks,
-Eric


On May 10, 2010, at 10:09 AM, Eric E. Monson wrote:

 Hey all,
 
 Packaging of my branded app is working well on Windows and Linux, but I'm 
 trying once again to see if I can get packaging to work on OS X. I'm getting 
 closer (after making sure my scripts were almost a verbatim copy of the PV 
 ones), but I'm confused about a few things -- maybe someone can help get me 
 further and/or clarify. The main difficulty is that I'm trying to not only 
 get my app to run, but give my users access to the PV Python functionality 
 (python shell and command line tools).
 
 1. When I generate an executable app bundle (either with CPack or with make 
 install), the app itself runs fine on a clean system, but the Python shell 
 can't find some of the libraries. It looks like a lot of the python-required 
 libraries are not being copied to .app/Contents/Libraries. How can I tell the 
 system that I need all of that stuff bundled, too, when I build a DragNDrop?
 
 2. If I want to distribute a version of the command line tools for making 
 batch animations that will recognize all of the plugins I've hard-coded into 
 my branded app, I've been assuming I need to package these binaries 
 (pvpython, etc) based on my branded app build -- Is this true, or do I just 
 need to somehow add my custom plugin libraries to a standard package of the 
 paraview servers executables? 
 
 The problem I have with (2) is that even when I build against a PV built with 
 VTK_USE_RPATH: OFF and my branded app with CMAKE_SKIP_RPATH: ON, I end up 
 with my executables and libraries depending on (the absolute path of) my 
 local Qt installation, so they won't run on other machines. (And, I can't get 
 my branded app to build against a version of PV which has 
 PARAVIEW_BUILD_QT_GUI: OFF.)
 
 Any help would be greatly appreciated!
 
 Thanks,
 -Eric
 
 --
 Eric E Monson
 Duke Visualization Technology Group
 
 
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Re: [Paraview] Branding branch

2010-05-11 Thread Eric E. Monson
Hey Sam,

Maybe this won't make a difference (and I don't remember where I saw to do 
this), but you have your PATH set to the Qt bin directory rather than the lib 
directory. I have some notes saying I had trouble unless the lib directory was 
in my PATH...

-Eric


On May 11, 2010, at 4:44 PM, A M wrote:

 Dear David and Eric
 
 Thanks for the comments, 
 Davie: 
 
 I added the path to the environment variable in VS and I still have the same 
 issue. I wrote something like this
 
 PATH=C:\Program Files\CMake 2.6\bin; C:\Qt\4.6.2\bin;C:\Program 
 Files\ParaView\bin ;%PATH% 
 this is what I think you meant. 
 
 Eric: 
 I did that already (I mean compiling Paraview with the examples and 
 BUILD_EXAMPLES: ON) I still get the same error, I almost tried any trick in 
 the book you can imagine!  the PATH variable in my use environment variable 
 looks like the flowing: 
 
 C:\Program Files\CMake 2.6\bin; 
 C:\Qt\4.6.2\bin
 C:\Program Files\ParaView\bin ;
 plus some other stuff not related to paraview, which seems pretty normal to 
 me, however I got the same errors as before! it does not find the dll files. 
 
 I honestly don't know what to do anymore. The only solution I can think of 
 right now is to switch to Linux operating system instead of windows, and that 
 doesn't necessarily means that problem would be solved either, 
 
 
 best! 
 ~sam 
 
 On Tue, May 11, 2010 at 2:12 PM, Eric E. Monson emon...@cs.duke.edu wrote:
 Hey Sam,
 
 Instead of trying to build those branded applications separately, did you try 
 first to build ParaView with BUILD_EXAMPLES: ON and see if those applications 
 are built correctly and run okay?
 
 I'm not really a Windows developer, either, but I've been able to build 
 Release versions of the Example applications and my own branded app on 
 Windows 7 64-bit. (I run them from the bin/Release directory under my build 
 directory.) I used Qt 4.6.2 that I compiled myself with VS 64-bit compiler, 
 Visual Studio 2008 Pro, CMake 2.8.1 and Python 2.6.
 
 My PATH variable is very minimal, I think only the Qt library entry is used 
 to help configure the ParaView build:
 
 %USERPROFILE%\Programming\qt-everywhere-opensource-src-4.6.2\lib;C:\Program 
 Files (x86)\CMake 2.8\bin;C:\Python26;C:\Program Files (x86)\VTK\bin
 
 (the VTK part at the end is just so my separate vtk python stuff runs okay)
 
 Sorry to hear you're having so much trouble. All of us run into these strange 
 things sometimes, but just so you know, it should work without any manual 
 copying of libraries, etc.
 
 Good luck,
 -Eric
 
 --
 Eric E Monson
 Duke Visualization Technology Group
 
 
 On May 11, 2010, at 1:05 PM, Dave Partyka wrote:
 
 To set the PATH when debugging from the IDE:
 
 1. Right click the project and select Properties
 2. In the tree view on the left select Debugging
 3. In the main panel there will be an entry called 'Environment'
 4. Set the Path by entering something like:
 
 PATH=C:\Path\To\Something;%PATH%
 
 On Tue, May 11, 2010 at 12:28 PM, Utkarsh Ayachit 
 utkarsh.ayac...@kitware.com wrote:
 Well, unfortunately, the DLL mess is a Windows OS thing. I am not a
 regular Windows developer so I cannot tell you exactly how to access
 that option, but Visual Studio does have an option somewhere that
 allows you to specify the environment in which the application is
 running. There you can set the PATH to include the ParaView bin/debug
 (or bin/release as the case maybe) and Qt dirs.
 
 You might want to download dependency walker
 (http://www.dependencywalker.com/), a handy utility to determine
 exactly what dlls are being used/not found etc. Use this to ensure
 that correct versions of the dlls are being imported.
 
 I'd refrain from copying over dlls, this often leads to user-related
 errors down the line.
 
 As far as the missing symbol error goes, it's possible your program is
 accidentally bringing in a mismatched vtkCommon dll. Do you have other
 VTK / ParaView builds in your PATH? Use the dependency walker to
 ensure that it's using the correct vtkCOmmon (and other) dlls.
 
 Hope that helps.
 
 Utkarsh
 
 
 On Tue, May 11, 2010 at 3:17 PM, A M ars...@uga.edu wrote:
 
  As you suggested, I added the dll path (ParaView-3.8.0-bin\bin\Debug) to 
  the
  environment variable as well as the Qt path, however when I ran the .exe
  file again I got the same error, so I added the dll files manually to the
  same directory as the .exe file, at first was asking about some Paraview
  dlls and the some Qt dlls (I have both of this added to the use path
  enviroment variable!) and then asked form some vtk dlls, the last error
  which I can not get passed of is asking for vtkCommon.dll, I added the dll
  to the directory and  I got this:
 
   the procedure entry point
  ?computepointforext...@vtkstructureddata@@saq...@z could not be located in
  the dynamic library link vtkCommon.dll !
 
  I run on WinXP SP3,  visual studio 9 2008 and the latest 

Re: [Paraview] Mac branded packaging

2010-05-11 Thread Utkarsh Ayachit
Eric,

You are correct, there's no way for pvpython/pvbatch to know about
your plugins currently, nor is there a way to create custom pvbatch
or pvpython executables. You will have to do an explicit LoadPlugin()
in your python scripts.

Utkarsh

On Tue, May 11, 2010 at 2:46 PM, Eric E. Monson emon...@cs.duke.edu wrote:
 Hey again,

 Okay, so I was able to solve #1: There was a cmake variable that wasn't set 
 (i.e. wasn't carried over from the ParaView build) so the bundle-fixing 
 script wasn't looking in the right spot for the Python libraries.

 If someone could still help me with the conceptual question in #2 I'd really 
 appreciate it. I would like my users to be able to generate batch animations 
 with pvpython. In my branded app I hard-code my custom plugins into my main 
 window class, and the python shell within PV automatically knows about my 
 custom filters, but I'm not clear on what it takes to get pvpython to know 
 about those custom filters, too.

 So, sorry this sounds so ignorant, but is it possible to build a version of 
 pvpython that will already have my custom filters built in? Or, will I always 
 have to do an explicit LoadPlugin(), in which case I can just use the 
 standard procedure for packaging the server executables, but also include my 
 custom plugin libraries along with the standard PV ones.

 Thanks,
 -Eric


 On May 10, 2010, at 10:09 AM, Eric E. Monson wrote:

 Hey all,

 Packaging of my branded app is working well on Windows and Linux, but I'm 
 trying once again to see if I can get packaging to work on OS X. I'm getting 
 closer (after making sure my scripts were almost a verbatim copy of the PV 
 ones), but I'm confused about a few things -- maybe someone can help get me 
 further and/or clarify. The main difficulty is that I'm trying to not only 
 get my app to run, but give my users access to the PV Python functionality 
 (python shell and command line tools).

 1. When I generate an executable app bundle (either with CPack or with make 
 install), the app itself runs fine on a clean system, but the Python 
 shell can't find some of the libraries. It looks like a lot of the 
 python-required libraries are not being copied to .app/Contents/Libraries. 
 How can I tell the system that I need all of that stuff bundled, too, when I 
 build a DragNDrop?

 2. If I want to distribute a version of the command line tools for making 
 batch animations that will recognize all of the plugins I've hard-coded into 
 my branded app, I've been assuming I need to package these binaries 
 (pvpython, etc) based on my branded app build -- Is this true, or do I just 
 need to somehow add my custom plugin libraries to a standard package of the 
 paraview servers executables?

 The problem I have with (2) is that even when I build against a PV built 
 with VTK_USE_RPATH: OFF and my branded app with CMAKE_SKIP_RPATH: ON, I end 
 up with my executables and libraries depending on (the absolute path of) my 
 local Qt installation, so they won't run on other machines. (And, I can't 
 get my branded app to build against a version of PV which has 
 PARAVIEW_BUILD_QT_GUI: OFF.)

 Any help would be greatly appreciated!

 Thanks,
 -Eric

 --
 Eric E Monson
 Duke Visualization Technology Group


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[Paraview] git cmake error

2010-05-11 Thread brownlee
I'm getting the following cmake error when trying to compile from the new
git repository:

 CMake Error at Utilities/VTKClientServer/vtkClientServer.cmake:16
(INCLUDE):
   include could not find load file:


/home/carson/svn/ParaView/build/Utilities/Xdmf2/vtk/Utilities/vtkXdmfKit.cmake
 Call Stack (most recent call first):
   Utilities/VTKClientServer/vtkClientServer.cmake:37 (PV_PRE_WRAP_VTK_CS)
   Utilities/VTKClientServer/Xdmf2/CMakeLists.txt:7 (PV_WRAP_VTK_CS)


I have done a find on vtkXdmfKit.cmake and it doesn't exist anywhere.  It
also is not in that directory through the webgit listing.  Is this a
missing file or did I clone the git repository or it's dependencies
incorrectly somehow?
thanks,
Carson
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Re: [Paraview] git cmake error

2010-05-11 Thread Utkarsh Ayachit
Try:
 git submodule init
 git submodule update

Utkarsh

On Tue, May 11, 2010 at 4:42 PM, brownlee brown...@cs.utah.edu wrote:
 I'm getting the following cmake error when trying to compile from the new
 git repository:
 
  CMake Error at Utilities/VTKClientServer/vtkClientServer.cmake:16
 (INCLUDE):
   include could not find load file:


 /home/carson/svn/ParaView/build/Utilities/Xdmf2/vtk/Utilities/vtkXdmfKit.cmake
  Call Stack (most recent call first):
   Utilities/VTKClientServer/vtkClientServer.cmake:37 (PV_PRE_WRAP_VTK_CS)
   Utilities/VTKClientServer/Xdmf2/CMakeLists.txt:7 (PV_WRAP_VTK_CS)
 

 I have done a find on vtkXdmfKit.cmake and it doesn't exist anywhere.  It
 also is not in that directory through the webgit listing.  Is this a
 missing file or did I clone the git repository or it's dependencies
 incorrectly somehow?
 thanks,
 Carson
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Re: [Paraview] git cmake error

2010-05-11 Thread brownlee
that fixed it thanks.  Must have been since I cloned each submodule
individually.
Carson


On Tue, 11 May 2010 16:46:29 -0600, Utkarsh Ayachit
utkarsh.ayac...@kitware.com wrote:
 Try:
 git submodule init
 git submodule update
 
 Utkarsh
 
 On Tue, May 11, 2010 at 4:42 PM, brownlee brown...@cs.utah.edu wrote:
 I'm getting the following cmake error when trying to compile from the
new
 git repository:
 
  CMake Error at Utilities/VTKClientServer/vtkClientServer.cmake:16
 (INCLUDE):
   include could not find load file:



/home/carson/svn/ParaView/build/Utilities/Xdmf2/vtk/Utilities/vtkXdmfKit.cmake
  Call Stack (most recent call first):
   Utilities/VTKClientServer/vtkClientServer.cmake:37
 (PV_PRE_WRAP_VTK_CS)
   Utilities/VTKClientServer/Xdmf2/CMakeLists.txt:7 (PV_WRAP_VTK_CS)
 

 I have done a find on vtkXdmfKit.cmake and it doesn't exist anywhere.
  It
 also is not in that directory through the webgit listing.  Is this a
 missing file or did I clone the git repository or it's dependencies
 incorrectly somehow?
 thanks,
 Carson
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