Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver"
Satish, If I just run, /Applications/MATLAB_R2018a.app/bin/matlab -nojvm -nodisplay, then Matlab can run normally in the terminal as Scott-Grad-MBP:~ zhihui$ /Applications/MATLAB_R2018a.app/bin/matlab -nojvm -nodisplay < M A T L A B (R) > Copyright 1984-2018 The MathWorks, Inc. R2018a (9.4.0.813654) 64-bit (maci64) February 23, 2018 For online documentation, see http://www.mathworks.com/support For product information, visit www.mathworks.com. >> -- Original -- From: "Balay, Satish";; Date: Oct 26, 2018 To: "avatar"<648934...@qq.com>; Cc: "petsc-users"; Subject: Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver" >>>>>>>>>>>>>> Testing Matlab at /Applications/MATLAB_R2018a.app Executing: /Applications/MATLAB_R2018a.app/bin/matlab -nojvm -nodisplay -r "display(['Version ' version]); exit" stdout: < M A T L A B (R) > Copyright 1984-2018 The MathWorks, Inc. R2018a (9.4.0.813654) 64-bit (maci64) February 23, 2018 For online documentation, see http://www.mathworks.com/support For product information, visit www.mathworks.com. Version 9.4.0.813654 (R2018a) WARNING: Found Matlab at /Applications/MATLAB_R2018a.app but unable to run <<<<<<<<<<<<<<<<< So configure attempted to run Matlab - and perhaps got an error. What do you get if you run this manually? /Applications/MATLAB_R2018a.app/bin/matlab -nojvm -nodisplay -r "display(['Version ' version]); exit" echo $? Satish On Fri, 26 Oct 2018, avatar wrote: > Hi Satish, > > > The attached is the whole configure.log file. I could not past it here > because it is too big and crash my webpage. I could not use the latest > version right now, because the project is maintained by other people. If I > update petsc, I will break the whole project. But we will use the latest > version when the maintenance guys update the dependences. > > > Thank you. > > > > > -- Original -- > From: "Balay, Satish";; > Date: Oct 26, 2018 > To: "avatar"<648934...@qq.com>; > Cc: "petsc-users"; > Subject: Re: [petsc-users] "Could not find a suitable archiver. Use > --with-arto specify an archiver" > > > > 1. You need to send us the complete log. > > 2. Also use current release - petsc-3.10 [not 3.8] > > Satish > > On Fri, 26 Oct 2018, avatar wrote: > > > Scott-Grad-MBP:petsc-3.8.3 zhihui$ ./configure > > --with-matlab-dir=/Applications/MATLAB_R2018a.app/ > > === > > Configuring PETSc to compile on your system > > === > > TESTING: configureLibrary from > > config.packages.Matlab(config/BuildSystem/config/*** > > UNABLE to CONFIGURE with GIVEN OPTIONS(see configure.log for > > details): > > --- > > You set a value for --with-matlab-dir, but /Applications/MATLAB_R2018a.app > > cannot be used > > *** > > > > > > > > Part of the log file as follow > > > > > > #ifndef PETSC_HAVE_MPI_REDUCE_SCATTER > > #define PETSC_HAVE_MPI_REDUCE_SCATTER 1 > > #endif > > > > > > #ifndef PETSC_HAVE_MPI_COMBINER_DUP > > #define PETSC_HAVE_MPI_COMBINER_DUP 1 > > #endif > > > > > > #ifndef PETSC_HAVE_MPIIO > > #define PETSC_HAVE_MPIIO 1 > > #endif > > > > > > #ifndef PETSC_HAVE_MPI_COMM_SPAWN > > #define PETSC_HAVE_MPI_COMM_SPAWN 1 > > #endif > > > > > > #ifndef PETSC_HAVE_MPI_FINT > > #define PETSC_HAVE_MPI_FINT 1 > > #endif > > > > > > #ifndef PETSC_HAVE_MPI_IBARRIER > > #define PETSC_HAVE_MPI_IBARRIER 1 > > #endif > > > > > > #ifndef PETSC_HAVE_MPI_ALLTOALLW > > #define PETSC_HAVE_MPI_ALLTOALLW 1 > > #endif > > > > > > #ifndef PETSC_HAVE_OMPI_RELEASE_VERSION > > #define PETSC_HAVE_OMPI_RELEASE_VERSION 2 > > #endif > >
Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver"
000114066574 bin/maci64/libmwddux_impl.dylib+00071028 _ZN4ddux16DDUXServiceProxyclERKNS_23LogFunctionUsageMessageERKN10foundation7msg_svc8exchange7RoutingE+00026852 [ 17] 0x000104f11d41 /Applications/MATLAB_R2018a.app/bin/maci64/libmwboost_thread.dylib+00011585 _ZN7mwboost6thread21start_thread_noexceptEv+0353 [ 18] 0x7fffa0d4a93b /usr/lib/system/libsystem_pthread.dylib+00014651 _pthread_body+0180 [ 19] 0x7fffa0d4a887 /usr/lib/system/libsystem_pthread.dylib+00014471 _pthread_body+ [ 20] 0x7fffa0d4a08d /usr/lib/system/libsystem_pthread.dylib+00012429 thread_start+0013 ** This crash report has been saved to disk as /Users/zhihui/matlab_crash_dump.77227-1 ** MATLAB is exiting because of fatal error Killed: 9 Scott-Grad-MBP:~ zhihui$ echo $? 137 -- Original -- From: "Balay, Satish";; Date: Oct 26, 2018 To: "avatar"<648934...@qq.com>; Cc: "petsc-users"; Subject: Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver" >>>>>>>>>>>>>> Testing Matlab at /Applications/MATLAB_R2018a.app Executing: /Applications/MATLAB_R2018a.app/bin/matlab -nojvm -nodisplay -r "display(['Version ' version]); exit" stdout: < M A T L A B (R) > Copyright 1984-2018 The MathWorks, Inc. R2018a (9.4.0.813654) 64-bit (maci64) February 23, 2018 For online documentation, see http://www.mathworks.com/support For product information, visit www.mathworks.com. Version 9.4.0.813654 (R2018a) WARNING: Found Matlab at /Applications/MATLAB_R2018a.app but unable to run <<<<<<<<<<<<<<<<< So configure attempted to run Matlab - and perhaps got an error. What do you get if you run this manually? /Applications/MATLAB_R2018a.app/bin/matlab -nojvm -nodisplay -r "display(['Version ' version]); exit" echo $? Satish On Fri, 26 Oct 2018, avatar wrote: > Hi Satish, > > > The attached is the whole configure.log file. I could not past it here > because it is too big and crash my webpage. I could not use the latest > version right now, because the project is maintained by other people. If I > update petsc, I will break the whole project. But we will use the latest > version when the maintenance guys update the dependences. > > > Thank you. > > > > > -- Original -- > From: "Balay, Satish";; > Date: Oct 26, 2018 > To: "avatar"<648934...@qq.com>; > Cc: "petsc-users"; > Subject: Re: [petsc-users] "Could not find a suitable archiver. Use > --with-arto specify an archiver" > > > > 1. You need to send us the complete log. > > 2. Also use current release - petsc-3.10 [not 3.8] > > Satish > > On Fri, 26 Oct 2018, avatar wrote: > > > Scott-Grad-MBP:petsc-3.8.3 zhihui$ ./configure > > --with-matlab-dir=/Applications/MATLAB_R2018a.app/ > > === > > Configuring PETSc to compile on your system > > === > > TESTING: configureLibrary from > > config.packages.Matlab(config/BuildSystem/config/*** > > UNABLE to CONFIGURE with GIVEN OPTIONS(see configure.log for > > details): > > --- > > You set a value for --with-matlab-dir, but /Applications/MATLAB_R2018a.app > > cannot be used > > *** > > > > > > > > Part of the log file as follow > > > > > > #ifndef PETSC_HAVE_MPI_REDUCE_SCATTER > > #define PETSC_HAVE_MPI_REDUCE_SCATTER 1 > > #endif > > > > > > #ifndef PETSC_HAVE_MPI_COMBINER_DUP > > #define PETSC_HAVE_MPI_COMBINER_DUP 1 > > #endif > > > > > > #ifndef PETSC_HAVE_MPIIO > > #define PETSC_HAVE_MPIIO 1 > > #endif > > > > > > #ifndef PETSC_HAVE_MPI_COMM_SPAWN > > #define PETSC_HAVE_MPI_COMM_SPAWN 1 > > #endif > > > > > > #ifndef PETSC_HAVE_MPI_FINT > > #define PETSC_HAVE_MPI_FINT 1 > > #endif > > > > > > #ifndef PETSC_HAVE_MPI_IBARRIER > > #define PETSC_HAVE_MPI_IBARRIER 1 > > #endif > > > > > > #ifndef PETSC_HAVE_MPI_ALLTOALLW > > #define PETSC_HAVE_
Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver"
ile
"/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/packages/Matlab.py",
line 23, in generateGuesses
raise RuntimeError('You set a value for --with-matlab-dir, but
'+self.argDB['with-matlab-dir']+' cannot be used\n')
Finishing Configure Run at Thu Oct 25 18:48:02 2018
-- Original --
From: "Balay, Satish";;
Date: Oct 26, 2018
To: "avatar"<648934...@qq.com>;
Cc: "petsc-users";
Subject: Re: [petsc-users] "Could not find a suitable archiver. Use
--with-arto specify an archiver"
On Fri, 26 Oct 2018, avatar wrote:
> Scott-Grad-MBP:bin zhihui$ pwd
> /Applications/MATLAB_R2018a.app/bin
Sorry - you need
--with-matlab-dir=/Applications/MATLAB_R2018a.app/
Satish
Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver"
When I do the following, it shows Scott-Grad-MBP:~ zhihui$ cd Applications/ Scott-Grad-MBP:Applications zhihui$ ls Chrome Apps.localized Scott-Grad-MBP:Applications zhihui$ From these, we can see there is no MATALB_R2018a.app in Applications. But when I get into bin, and do the following, it does show Scott-Grad-MBP:bin zhihui$ pwd /Applications/MATLAB_R2018a.app/bin Scott-Grad-MBP:bin zhihui$ ls activate_matlab.sh lcdata_utf8.xml matlab-glselector.shmexsh deactivate_matlab.shldd matopts.sh optsetup.sh engopts.sh m3iregistry mex registry lcdata.xml maci64 mexext util lcdata.xsd matlab mexopts.sh -- Original -- From: "Balay, Satish";; Date: Oct 26, 2018 To: "avatar"<648934...@qq.com>; Cc: "petsc-users"; Subject: Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver" you need --with-matlab-dir=/Users/zhihui/Applications/MATLAB_R2018a.app Satish On Fri, 26 Oct 2018, avatar wrote: > Thank Satish. It worked as you said. But when I rebuild petsc using > ./configure --with-matlab > It prompts > === > Configuring PETSc to compile on your system > === > TESTING: configureLibrary from > config.packages.Matlab(config/BuildSystem/config/packages/Matlab.py:35) > > *** > UNABLE to CONFIGURE with GIVEN OPTIONS(see configure.log for > details): > --- > Could not find a functional Matlab > Run with --with-matlab-dir=Matlabrootdir if you know where it is > *** > > > > Then, I did the following. But it shows that > "/Users/zhihui/Applications/MATLAB_R2018a.app/bin/matlab" nonexistent. > However, it does exist as > Scott-Grad-MBP:bin zhihui$ pwd > /Applications/MATLAB_R2018a.app/bin > Scott-Grad-MBP:bin zhihui$ ls > activate_matlab.shlcdata_utf8.xml matlab-glselector.shmexsh > deactivate_matlab.sh ldd matopts.sh > optsetup.sh > engopts.shm3iregistry mex registry > lcdata.xmlmaci64 mexext util > lcdata.xsdmatlab mexopts.sh > > > > Do you know what it is going on here? > > > > > Scott-Grad-MBP:petsc-3.8.3 zhihui$ ./configure > --with-matlab-dir=./../../../../Applications/MATLAB_R2018a/bin/matlab > === > Configuring PETSc to compile on your system > === > *** > ERROR in COMMAND LINE ARGUMENT to ./configure > --- > Nonexistent directory: /Users/zhihui/Applications/MATLAB_R2018a/bin/matlab > for key with-matlab-dir > *** > > > > > File "./config/configure.py", line 390, in petsc_configure > framework = > config.framework.Framework(['--configModules=PETSc.Configure','--optionsModule=config.compilerOptions']+sys.argv[1:], > loadArgDB = 0) > File > "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/framework.py", > line 110, in __init__ > self.createChildren() > File > "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/framework.py", > line 321, in createChildren > self.getChild(moduleName) > File > "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/framework.py", > line 306, in getChild > config.setupDependencies(self) > File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/PETSc/Configure.py", > line 107, in setupDependencies > obj = self.registerPythonFile(package,'config.packages') > File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/PETSc/Configure.py", > line 63, in registerPythonFile > utilityObj = > self.framework.require(directory+utilityName, self) > File > "/Users/zhihui/igx/deps
Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver"
still shows these
Scott-Grad-MBP:petsc-3.8.3 zhihui$ ./configure
--with-matlab-dir=/Users/zhihui/Applications/MATLAB_R2018a.app
===
Configuring PETSc to compile on your system
===
***
ERROR in COMMAND LINE ARGUMENT to ./configure
---
Nonexistent directory: /Users/zhihui/Applications/MATLAB_R2018a.app for key
with-matlab-dir
***
File "./config/configure.py", line 390, in petsc_configure
framework =
config.framework.Framework(['--configModules=PETSc.Configure','--optionsModule=config.compilerOptions']+sys.argv[1:],
loadArgDB = 0)
File
"/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/framework.py",
line 110, in __init__
self.createChildren()
File
"/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/framework.py",
line 321, in createChildren
self.getChild(moduleName)
File
"/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/framework.py",
line 306, in getChild
config.setupDependencies(self)
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/PETSc/Configure.py",
line 107, in setupDependencies
obj = self.registerPythonFile(package,'config.packages')
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/PETSc/Configure.py",
line 63, in registerPythonFile
utilityObj =
self.framework.require(directory+utilityName, self)
File
"/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/framework.py",
line 326, in require
config = self.getChild(moduleName, keywordArgs)
File
"/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/framework.py",
line 304, in getChild
config.setup()
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/script.py",
line 101, in setup
logger.Logger.setup(self)
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/logger.py",
line 85, in setup
args.ArgumentProcessor.setup(self)
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/args.py",
line 75, in setup
self.setupArguments(self.argDB)
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/script.py",
line 85, in setupArguments
self.setupHelp(self.help)
File
"/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/packages/Matlab.py",
line 15, in setupHelp
help.addArgument('MATLAB', '-with-matlab-dir=',
nargs.ArgDir(None, None, 'Specify the root directory of the Matlab
installation'))
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/help.py",
line 107, in addArgument
self.argDB.setType(self.getArgName(name), argType, forceLocal = 1)
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/RDict.py",
line 213, in setType
value.setValue(v.getValue())
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/nargs.py",
line 324, in setValue
raise ValueError('Nonexistent directory: '+str(value)+' for key
'+str(self.key))
-- Original --
From: "Balay, Satish";;
Date: Oct 26, 2018
To: "avatar"<648934...@qq.com>;
Cc: "petsc-users";
Subject: Re: [petsc-users] "Could not find a suitable archiver. Use
--with-arto specify an archiver"
you need
--with-matlab-dir=/Users/zhihui/Applications/MATLAB_R2018a.app
Satish
On Fri, 26 Oct 2018, avatar wrote:
> Thank Satish. It worked as you said. But when I rebuild petsc using
> ./configure --with-matlab
> It prompts
> ===
> Configuring PETSc to compile on your system
> ===
> TESTING: configureLibrary from
> config.packages.Matlab(config/BuildSystem/config/packages/Matlab.py:35)
>
> ***
> UNABLE to CONFIGURE with GIVEN OPTIONS(see configure.log for
> details):
> ---
> Could not find a functional Matlab
> Run with --with-matlab-dir=Matlabrootdir if you know where it is
> ***
>
>
>
> Then, I did the following. But it shows that
> "/Users/zhihui/Applications/MATLAB
Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver"
Thank Satish. It worked as you said. But when I rebuild petsc using
./configure --with-matlab
It prompts
===
Configuring PETSc to compile on your system
===
TESTING: configureLibrary from
config.packages.Matlab(config/BuildSystem/config/packages/Matlab.py:35)
***
UNABLE to CONFIGURE with GIVEN OPTIONS(see configure.log for
details):
---
Could not find a functional Matlab
Run with --with-matlab-dir=Matlabrootdir if you know where it is
***
Then, I did the following. But it shows that
"/Users/zhihui/Applications/MATLAB_R2018a.app/bin/matlab" nonexistent. However,
it does exist as
Scott-Grad-MBP:bin zhihui$ pwd
/Applications/MATLAB_R2018a.app/bin
Scott-Grad-MBP:bin zhihui$ ls
activate_matlab.sh lcdata_utf8.xml matlab-glselector.shmexsh
deactivate_matlab.shldd matopts.sh
optsetup.sh
engopts.sh m3iregistry mex registry
lcdata.xml maci64 mexext util
lcdata.xsd matlab mexopts.sh
Do you know what it is going on here?
Scott-Grad-MBP:petsc-3.8.3 zhihui$ ./configure
--with-matlab-dir=./../../../../Applications/MATLAB_R2018a/bin/matlab
===
Configuring PETSc to compile on your system
===
***
ERROR in COMMAND LINE ARGUMENT to ./configure
---
Nonexistent directory: /Users/zhihui/Applications/MATLAB_R2018a/bin/matlab for
key with-matlab-dir
***
File "./config/configure.py", line 390, in petsc_configure
framework =
config.framework.Framework(['--configModules=PETSc.Configure','--optionsModule=config.compilerOptions']+sys.argv[1:],
loadArgDB = 0)
File
"/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/framework.py",
line 110, in __init__
self.createChildren()
File
"/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/framework.py",
line 321, in createChildren
self.getChild(moduleName)
File
"/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/framework.py",
line 306, in getChild
config.setupDependencies(self)
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/PETSc/Configure.py",
line 107, in setupDependencies
obj = self.registerPythonFile(package,'config.packages')
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/PETSc/Configure.py",
line 63, in registerPythonFile
utilityObj =
self.framework.require(directory+utilityName, self)
File
"/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/framework.py",
line 326, in require
config = self.getChild(moduleName, keywordArgs)
File
"/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/framework.py",
line 304, in getChild
config.setup()
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/script.py",
line 101, in setup
logger.Logger.setup(self)
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/logger.py",
line 85, in setup
args.ArgumentProcessor.setup(self)
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/args.py",
line 75, in setup
self.setupArguments(self.argDB)
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/script.py",
line 85, in setupArguments
self.setupHelp(self.help)
File
"/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/config/packages/Matlab.py",
line 15, in setupHelp
help.addArgument('MATLAB', '-with-matlab-dir=',
nargs.ArgDir(None, None, 'Specify the root directory of the Matlab
installation'))
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/help.py",
line 107, in addArgument
self.argDB.setType(self.getArgName(name), argType, forceLocal = 1)
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/RDict.py",
line 213, in setType
value.setValue(v.getValue())
File "/Users/zhihui/igx/deps/srcs/petsc-3.8.3/config/BuildSystem/nargs.py",
line 324, in setValue
raise ValueError('Nonexistent d
Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver"
Is there other way to overcome this problem? Because if I don't set TMPDIR as \tmp. My other project will break. And actually I don't even know where my project set up the TMPDIR value. -- Original -- From: "Balay, Satish";; Date: Oct 26, 2018 To: "petsc-users"; Cc: "avatar"<648934...@qq.com>; Subject: Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver" To clarify, I meant: remove 'code that is changing the value of TMPDIR to 'tmp' Satish On Thu, 25 Oct 2018, Satish Balay wrote: > I see - you have: > > >> > TMPDIR=tmp > << > > Did you set this in your ~/.bashrc or somewhere? This is wrong and is > breaking tools. > OSX should setup something likethe following for you. > > petsc-mini:~ balay$ echo $TMPDIR > /var/folders/lw/hyrlb1051p9fj96qkktfvhvmgn/T/ > > Remove it - and retry building PETSc. > > Satish > > On Thu, 25 Oct 2018, Satish Balay wrote: > > > Looks like it worked. > > > > What do you have for: > > > > echo $TMPDIR > > ls -l libconf1.a > > /usr/bin/ar t libconf1.a > > TMPDIR=$PWD /usr/bin/ar t libconf1.a > > > > Satish > > > > > > On Fri, 26 Oct 2018, avatar wrote: > > > > > As follow. Then, what I should do next? > > > > > > > > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ TMPDIR=$PWD /usr/bin/ar cr > > > libconf1.a sizeof.o > > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ > > > > > > > > > > > > > > > > > > -- Original -- > > > From: "Balay, Satish";; > > > Date: Oct 26, 2018 > > > To: "avatar"<648934...@qq.com>; > > > Cc: "petsc-users"; > > > Subject: Re: [petsc-users] "Could not find a suitable archiver. Use > > > --with-arto specify an archiver" > > > > > > > > > > > > How about: > > > > > > TMPDIR=$PWD /usr/bin/ar cr libconf1.a sizeof.o > > > > > > Satish > > > > > > On Fri, 26 Oct 2018, avatar wrote: > > > > > > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ mpicc -c sizeof.c > > > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ ls > > > > Index.c PetscGetCPUTime.c PetscMemcmp.c > > > > PetscTime.c benchmarkExample.py sizeof.c > > > > Index.c.htmlPetscGetCPUTime.c.html PetscMemcmp.c.html > > > > PetscTime.c.htmldaemon.py sizeof.o > > > > MPI_Wtime.c PetscGetTime.c PetscMemcpy.c > > > > PetscVecNorm.c index.html streams > > > > MPI_Wtime.c.htmlPetscGetTime.c.html PetscMemcpy.c.html > > > > PetscVecNorm.c.html libconf1.a > > > > PLogEvent.c PetscMalloc.c PetscMemzero.c > > > > benchmarkAssembly.pymakefile > > > > PLogEvent.c.htmlPetscMalloc.c.html PetscMemzero.c.html > > > > benchmarkBatch.py makefile.html > > > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ /usr/bin/ar cr libconf1.a > > > > sizeof.o > > > > ar: temporary file: No such file or directory > > > > > > > > > > > > > > > > > > > > > > > > -- Original -- > > > > From: "Balay, Satish";; > > > > Date: Oct 26, 2018 > > > > To: "avatar"<648934...@qq.com>; > > > > Cc: "petsc-users"; > > > > Subject: Re: [petsc-users] "Could not find a suitable archiver. Use > > > > --with-arto specify an archiver" > > > > > > > > > > > > > > > > What about: > > > > > > > > > > > > mpicc -c sizeof.c > > > > /usr/bin/ar cr libconf1.a sizeof.o > > > > > > > > Satish > > > > > > > > On Fri, 26 Oct 2018, avatar wrote: > > > > > > > > > I could not do all things you posted below. I get these: > > > > > > > > > > > > > > > Scott-Grad-MacBook-Pro:petsc-3.8.3 zhihui$ cd src > > > > > Scott-Grad-MacBook-Pro:src zhihui$ cd benchmarks/ > > > > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ mpicc -c
Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver"
These are what I got: Scott-Grad-MacBook-Pro:benchmarks zhihui$ echo $TMPDIR tmp Scott-Grad-MacBook-Pro:benchmarks zhihui$ ls -l libconf1.a -rw-r--r-- 1 zhihui staff 1624 Oct 25 17:36 libconf1.a Scott-Grad-MacBook-Pro:benchmarks zhihui$ /usr/bin/ar t libconf1.a __.SYMDEF SORTED sizeof.o Scott-Grad-MacBook-Pro:benchmarks zhihui$ TMPDIR=$PWD /usr/bin/ar t libconf1.a __.SYMDEF SORTED sizeof.o -- Original -- From: "Balay, Satish";; Date: Oct 26, 2018 To: "avatar"<648934...@qq.com>; Cc: "petsc-users"; Subject: Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver" Looks like it worked. What do you have for: echo $TMPDIR ls -l libconf1.a /usr/bin/ar t libconf1.a TMPDIR=$PWD /usr/bin/ar t libconf1.a Satish On Fri, 26 Oct 2018, avatar wrote: > As follow. Then, what I should do next? > > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ TMPDIR=$PWD /usr/bin/ar cr > libconf1.a sizeof.o > Scott-Grad-MacBook-Pro:benchmarks zhihui$ > > > > > > -- Original -- > From: "Balay, Satish";; > Date: Oct 26, 2018 > To: "avatar"<648934...@qq.com>; > Cc: "petsc-users"; > Subject: Re: [petsc-users] "Could not find a suitable archiver. Use > --with-arto specify an archiver" > > > > How about: > > TMPDIR=$PWD /usr/bin/ar cr libconf1.a sizeof.o > > Satish > > On Fri, 26 Oct 2018, avatar wrote: > > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ mpicc -c sizeof.c > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ ls > > Index.c PetscGetCPUTime.c PetscMemcmp.c > > PetscTime.c benchmarkExample.py sizeof.c > > Index.c.htmlPetscGetCPUTime.c.html PetscMemcmp.c.html > > PetscTime.c.htmldaemon.py sizeof.o > > MPI_Wtime.c PetscGetTime.c PetscMemcpy.c > > PetscVecNorm.c index.html streams > > MPI_Wtime.c.htmlPetscGetTime.c.html PetscMemcpy.c.html > > PetscVecNorm.c.html libconf1.a > > PLogEvent.c PetscMalloc.c PetscMemzero.c > > benchmarkAssembly.pymakefile > > PLogEvent.c.htmlPetscMalloc.c.html PetscMemzero.c.html > > benchmarkBatch.py makefile.html > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ /usr/bin/ar cr libconf1.a sizeof.o > > ar: temporary file: No such file or directory > > > > > > > > > > > > -- Original -- > > From: "Balay, Satish";; > > Date: Oct 26, 2018 > > To: "avatar"<648934...@qq.com>; > > Cc: "petsc-users"; > > Subject: Re: [petsc-users] "Could not find a suitable archiver. Use > > --with-arto specify an archiver" > > > > > > > > What about: > > > > > > mpicc -c sizeof.c > > /usr/bin/ar cr libconf1.a sizeof.o > > > > Satish > > > > On Fri, 26 Oct 2018, avatar wrote: > > > > > I could not do all things you posted below. I get these: > > > > > > > > > Scott-Grad-MacBook-Pro:petsc-3.8.3 zhihui$ cd src > > > Scott-Grad-MacBook-Pro:src zhihui$ cd benchmarks/ > > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ mpicc -c sizeof.c > > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ ls -l sizeof.o > > > -rw-r--r-- 1 zhihui staff 1452 Oct 25 17:00 sizeof.o > > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ /usr/bin/ar cr /tmp/libconf1.a > > > sizeof.o > > > ar: temporary file: No such file or directory > > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ /usr/bin/ar cr /tmp/libconf1.a > > > sizeof.o > > > ar: temporary file: No such file or directory > > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ > > > > > > > > > > > > > > > > > > -- Original -- > > > From: "Balay, Satish";; > > > Date: Oct 26, 2018 > > > To: "avatar"<648934...@qq.com>; > > > Cc: "petsc-users"; > > > Subject: Re: [petsc-users] "Could not find a suitable archiver. Use > > > --with-arto specify an archiver" > > > > > > > > > > > > On Fri, 26 Oct 2018, avatar wrote: > > > > > > > Hi Satish, > > > > > > > > > > > > Thank you very much for your quick response. > > > > > >
Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver"
As follow. Then, what I should do next? Scott-Grad-MacBook-Pro:benchmarks zhihui$ TMPDIR=$PWD /usr/bin/ar cr libconf1.a sizeof.o Scott-Grad-MacBook-Pro:benchmarks zhihui$ -- Original -- From: "Balay, Satish";; Date: Oct 26, 2018 To: "avatar"<648934...@qq.com>; Cc: "petsc-users"; Subject: Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver" How about: TMPDIR=$PWD /usr/bin/ar cr libconf1.a sizeof.o Satish On Fri, 26 Oct 2018, avatar wrote: > Scott-Grad-MacBook-Pro:benchmarks zhihui$ mpicc -c sizeof.c > Scott-Grad-MacBook-Pro:benchmarks zhihui$ ls > Index.c PetscGetCPUTime.c PetscMemcmp.c > PetscTime.c benchmarkExample.py sizeof.c > Index.c.html PetscGetCPUTime.c.html PetscMemcmp.c.html > PetscTime.c.htmldaemon.py sizeof.o > MPI_Wtime.c PetscGetTime.c PetscMemcpy.c > PetscVecNorm.c index.html streams > MPI_Wtime.c.html PetscGetTime.c.html PetscMemcpy.c.html > PetscVecNorm.c.html libconf1.a > PLogEvent.c PetscMalloc.c PetscMemzero.c > benchmarkAssembly.pymakefile > PLogEvent.c.html PetscMalloc.c.html PetscMemzero.c.html > benchmarkBatch.py makefile.html > Scott-Grad-MacBook-Pro:benchmarks zhihui$ /usr/bin/ar cr libconf1.a sizeof.o > ar: temporary file: No such file or directory > > > > > > -- Original -- > From: "Balay, Satish";; > Date: Oct 26, 2018 > To: "avatar"<648934...@qq.com>; > Cc: "petsc-users"; > Subject: Re: [petsc-users] "Could not find a suitable archiver. Use > --with-arto specify an archiver" > > > > What about: > > > mpicc -c sizeof.c > /usr/bin/ar cr libconf1.a sizeof.o > > Satish > > On Fri, 26 Oct 2018, avatar wrote: > > > I could not do all things you posted below. I get these: > > > > > > Scott-Grad-MacBook-Pro:petsc-3.8.3 zhihui$ cd src > > Scott-Grad-MacBook-Pro:src zhihui$ cd benchmarks/ > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ mpicc -c sizeof.c > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ ls -l sizeof.o > > -rw-r--r-- 1 zhihui staff 1452 Oct 25 17:00 sizeof.o > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ /usr/bin/ar cr /tmp/libconf1.a > > sizeof.o > > ar: temporary file: No such file or directory > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ /usr/bin/ar cr /tmp/libconf1.a > > sizeof.o > > ar: temporary file: No such file or directory > > Scott-Grad-MacBook-Pro:benchmarks zhihui$ > > > > > > > > > > > > -- Original -- > > From: "Balay, Satish";; > > Date: Oct 26, 2018 > > To: "avatar"<648934...@qq.com>; > > Cc: "petsc-users"; > > Subject: Re: [petsc-users] "Could not find a suitable archiver. Use > > --with-arto specify an archiver" > > > > > > > > On Fri, 26 Oct 2018, avatar wrote: > > > > > Hi Satish, > > > > > > > > > Thank you very much for your quick response. > > > > > > > > > The log file is as follow: > > > > > > > >>>>>> > > Executing: /usr/bin/ar cr /tmp/petsc-mjVUVK/config.setCompilers/libconf1.a > > /tmp/petsc-mjVUVK/config.setCompilers/conf1.o > > Possible ERROR while running archiver: exit code 256 > > stderr: > > ar: temporary file: No such file or directory > > Archiver is not functional > > > > <<<<<< > > This is a strange error. > > > > What do you get when you do the following: > > > > balay@jpro^~/petsc(maint-3.8) $ cd src/benchmarks/ > > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ mpicc -c sizeof.c > > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ls -l sizeof.o > > -rw-r--r-- 1 balay staff 3036 Oct 25 17:54 sizeof.o > > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ /usr/bin/ar cr > > /tmp/libconf1.a sizeof.o > > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ls -l /tmp/libconf1.a > > -rw-r--r-- 1 balay wheel 3224 Oct 25 17:55 /tmp/libconf1.a > > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ar t /tmp/libconf1.a > > __.SYMDEF SORTED > > sizeof.o > > > > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ cp sizeof.o /tmp/ > > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ls -l /tmp/sizeof.o > > -rw-r--r-- 1 balay wheel 3036 Oct 25 17:55 /tmp/sizeof.o > > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ /usr/bin/ar cr > > /tmp/libconf2.a /tmp/sizeof.o > > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ls -l /tmp/libconf2.a > > -rw-r--r-- 1 balay wheel 3224 Oct 25 17:55 /tmp/libconf2.a > > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ar t /tmp/libconf2.a > > __.SYMDEF SORTED > > sizeof.o > > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ > > > > Satish
Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver"
Scott-Grad-MacBook-Pro:benchmarks zhihui$ mpicc -c sizeof.c Scott-Grad-MacBook-Pro:benchmarks zhihui$ ls Index.c PetscGetCPUTime.c PetscMemcmp.c PetscTime.c benchmarkExample.py sizeof.c Index.c.htmlPetscGetCPUTime.c.html PetscMemcmp.c.html PetscTime.c.htmldaemon.py sizeof.o MPI_Wtime.c PetscGetTime.c PetscMemcpy.c PetscVecNorm.c index.html streams MPI_Wtime.c.htmlPetscGetTime.c.html PetscMemcpy.c.html PetscVecNorm.c.html libconf1.a PLogEvent.c PetscMalloc.c PetscMemzero.c benchmarkAssembly.pymakefile PLogEvent.c.htmlPetscMalloc.c.html PetscMemzero.c.html benchmarkBatch.py makefile.html Scott-Grad-MacBook-Pro:benchmarks zhihui$ /usr/bin/ar cr libconf1.a sizeof.o ar: temporary file: No such file or directory -- Original -- From: "Balay, Satish";; Date: Oct 26, 2018 To: "avatar"<648934...@qq.com>; Cc: "petsc-users"; Subject: Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver" What about: mpicc -c sizeof.c /usr/bin/ar cr libconf1.a sizeof.o Satish On Fri, 26 Oct 2018, avatar wrote: > I could not do all things you posted below. I get these: > > > Scott-Grad-MacBook-Pro:petsc-3.8.3 zhihui$ cd src > Scott-Grad-MacBook-Pro:src zhihui$ cd benchmarks/ > Scott-Grad-MacBook-Pro:benchmarks zhihui$ mpicc -c sizeof.c > Scott-Grad-MacBook-Pro:benchmarks zhihui$ ls -l sizeof.o > -rw-r--r-- 1 zhihui staff 1452 Oct 25 17:00 sizeof.o > Scott-Grad-MacBook-Pro:benchmarks zhihui$ /usr/bin/ar cr /tmp/libconf1.a > sizeof.o > ar: temporary file: No such file or directory > Scott-Grad-MacBook-Pro:benchmarks zhihui$ /usr/bin/ar cr /tmp/libconf1.a > sizeof.o > ar: temporary file: No such file or directory > Scott-Grad-MacBook-Pro:benchmarks zhihui$ > > > > > > -- Original -- > From: "Balay, Satish";; > Date: Oct 26, 2018 > To: "avatar"<648934...@qq.com>; > Cc: "petsc-users"; > Subject: Re: [petsc-users] "Could not find a suitable archiver. Use > --with-arto specify an archiver" > > > > On Fri, 26 Oct 2018, avatar wrote: > > > Hi Satish, > > > > > > Thank you very much for your quick response. > > > > > > The log file is as follow: > > > > >>>>>> > Executing: /usr/bin/ar cr /tmp/petsc-mjVUVK/config.setCompilers/libconf1.a > /tmp/petsc-mjVUVK/config.setCompilers/conf1.o > Possible ERROR while running archiver: exit code 256 > stderr: > ar: temporary file: No such file or directory > Archiver is not functional > > <<<<<< > This is a strange error. > > What do you get when you do the following: > > balay@jpro^~/petsc(maint-3.8) $ cd src/benchmarks/ > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ mpicc -c sizeof.c > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ls -l sizeof.o > -rw-r--r-- 1 balay staff 3036 Oct 25 17:54 sizeof.o > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ /usr/bin/ar cr /tmp/libconf1.a > sizeof.o > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ls -l /tmp/libconf1.a > -rw-r--r-- 1 balay wheel 3224 Oct 25 17:55 /tmp/libconf1.a > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ar t /tmp/libconf1.a > __.SYMDEF SORTED > sizeof.o > > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ cp sizeof.o /tmp/ > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ls -l /tmp/sizeof.o > -rw-r--r-- 1 balay wheel 3036 Oct 25 17:55 /tmp/sizeof.o > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ /usr/bin/ar cr /tmp/libconf2.a > /tmp/sizeof.o > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ls -l /tmp/libconf2.a > -rw-r--r-- 1 balay wheel 3224 Oct 25 17:55 /tmp/libconf2.a > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ar t /tmp/libconf2.a > __.SYMDEF SORTED > sizeof.o > balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ > > Satish
Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver"
I could not do all things you posted below. I get these: Scott-Grad-MacBook-Pro:petsc-3.8.3 zhihui$ cd src Scott-Grad-MacBook-Pro:src zhihui$ cd benchmarks/ Scott-Grad-MacBook-Pro:benchmarks zhihui$ mpicc -c sizeof.c Scott-Grad-MacBook-Pro:benchmarks zhihui$ ls -l sizeof.o -rw-r--r-- 1 zhihui staff 1452 Oct 25 17:00 sizeof.o Scott-Grad-MacBook-Pro:benchmarks zhihui$ /usr/bin/ar cr /tmp/libconf1.a sizeof.o ar: temporary file: No such file or directory Scott-Grad-MacBook-Pro:benchmarks zhihui$ /usr/bin/ar cr /tmp/libconf1.a sizeof.o ar: temporary file: No such file or directory Scott-Grad-MacBook-Pro:benchmarks zhihui$ -- Original -- From: "Balay, Satish";; Date: Oct 26, 2018 To: "avatar"<648934...@qq.com>; Cc: "petsc-users"; Subject: Re: [petsc-users] "Could not find a suitable archiver. Use --with-arto specify an archiver" On Fri, 26 Oct 2018, avatar wrote: > Hi Satish, > > > Thank you very much for your quick response. > > > The log file is as follow: > >>>>>> Executing: /usr/bin/ar cr /tmp/petsc-mjVUVK/config.setCompilers/libconf1.a /tmp/petsc-mjVUVK/config.setCompilers/conf1.o Possible ERROR while running archiver: exit code 256 stderr: ar: temporary file: No such file or directory Archiver is not functional <<<<<< This is a strange error. What do you get when you do the following: balay@jpro^~/petsc(maint-3.8) $ cd src/benchmarks/ balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ mpicc -c sizeof.c balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ls -l sizeof.o -rw-r--r-- 1 balay staff 3036 Oct 25 17:54 sizeof.o balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ /usr/bin/ar cr /tmp/libconf1.a sizeof.o balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ls -l /tmp/libconf1.a -rw-r--r-- 1 balay wheel 3224 Oct 25 17:55 /tmp/libconf1.a balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ar t /tmp/libconf1.a __.SYMDEF SORTED sizeof.o balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ cp sizeof.o /tmp/ balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ls -l /tmp/sizeof.o -rw-r--r-- 1 balay wheel 3036 Oct 25 17:55 /tmp/sizeof.o balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ /usr/bin/ar cr /tmp/libconf2.a /tmp/sizeof.o balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ls -l /tmp/libconf2.a -rw-r--r-- 1 balay wheel 3224 Oct 25 17:55 /tmp/libconf2.a balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ ar t /tmp/libconf2.a __.SYMDEF SORTED sizeof.o balay@jpro^~/petsc/src/benchmarks(maint-3.8) $ Satish
[petsc-users] "Could not find a suitable archiver. Use --with-ar to specify an archiver"
Hi, When I try to configure PETSc to connect Matlab with the following command ./petsc-3.8.3/configure ??with-matlab , it prompts === Configuring PETSc to compile on your system === TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1184) *** UNABLE to CONFIGURE with GIVEN OPTIONS(see configure.log for details): --- Could not find a suitable archiver. Use --with-ar to specify an archiver. *** I am a newbie on Petsc. Could you please tell me how I should specify an archiver? I am on MacOX system. I have tried many ways but it still does not work. Thank you very much for your help. Best, Joe
