[PyMOL] To post a message to all the list members

2013-03-20 Thread 管泓翔
Dear Sir:

I would like to post a message to all the list members
and my E-mail is hhguan1...@gmail.com





 Thank you
Hong-Hsiang

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Re: [PyMOL] Error while running a python script

2013-03-20 Thread Troels Emtekær Linnet
Is that a space in your command?

cmd.load (1A73.pdb)



Troels Emtekær Linnet
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2013/3/20 bharat gupta bharat.85.m...@gmail.com

 Hi,

 I am a newbie in python scripting from pymol. I am getting the following
 error while using the command cmd.load :-


 from pymol import cmd

 print Current PyMoL Directory:, cmd.pwd()
 cmd.load (1A73.pdb)

 Error:-
 --
 Traceback (most recent call last):
   File test.py, line 5, in module
 cmd.load (1A73.pdb)
   File /usr/lib/python2.7/site-packages/pymol/importing.py, line 872, in
 load
 _self.unlock(r,_self)
   File /usr/lib/python2.7/site-packages/pymol/locking.py, line 79, in
 unlock
 if (thread.get_ident() == pymol.glutThread):
 AttributeError: 'module' object has no attribute 'glutThread'



 
 Bharat



 --
 Everyone hates slow websites. So do we.
 Make your web apps faster with AppDynamics
 Download AppDynamics Lite for free today:
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Re: [PyMOL] (no subject)

2013-03-20 Thread Thomas Holder
Hi Nina Marie,

I haven't tested that thoroughly, but for me Incentive PyMOL 1.5.0.5
runs fine on Windows 8.

Cheers,
  Thomas

Wolf, Nina Marie wrote, On 03/19/13 21:11:
 Hi,
 
 I recently upgraded my computer to windows 8. Since then, pymol will not
 open. Is the latest version of pymol incompatible with windows 8? Or is
 there something I can do to get it working on my computer?

-- 
Thomas Holder
PyMOL Developer
Schrödinger Contractor

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Re: [PyMOL] Error while running a python script

2013-03-20 Thread Thomas Holder
Hi Bharat,

you should run python scripts from within PyMOL using the run command:
http://pymolwiki.org/index.php/Running_Scripts

Or follow these examples if you really need to launch PyMOL from a
python session (not recommended for beginners):
http://pymolwiki.org/index.php/Launching_From_a_Script

Cheers,
  Thomas

bharat gupta wrote, On 03/20/13 03:23:
 Hi,
 
 I am a newbie in python scripting from pymol. I am getting the following
 error while using the command cmd.load :-
 
 from pymol import cmd
 
 print Current PyMoL Directory:, cmd.pwd()
 cmd.load (1A73.pdb)
 
 Error:-
 --
 Traceback (most recent call last):
   File test.py, line 5, in module
 cmd.load (1A73.pdb)
   File /usr/lib/python2.7/site-packages/pymol/importing.py, line 872,
 in load
 _self.unlock(r,_self)
   File /usr/lib/python2.7/site-packages/pymol/locking.py, line 79, in
 unlock
 if (thread.get_ident() == pymol.glutThread):
 AttributeError: 'module' object has no attribute 'glutThread'
 
 
 Bharat

-- 
Thomas Holder
PyMOL Developer
Schrödinger Contractor

--
Everyone hates slow websites. So do we.
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[PyMOL] segmentation fault in Ubuntu12.10

2013-03-20 Thread 管泓翔
Dear Sir,
 When I load the map,big-sized map of virus, in pymol v1.5
 on my computer with 64bit ubuntu 12.10, the pymol run very slow and then
 showed segmentation fault. On my old computer with Ubuntu 9.10, the same
 map can run very smooth.


 Thank you Hong-Hsiang

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