[PyMOL] 1.7.6.6 does not display a 1.7.4.4 .pse ifle.

2015-11-05 Thread Mark A Saper 
I guess this is for Schrodinger representative. 

I have a .PSE file (21.8 Mbyte) that does not open properly in 1.7.6.6.  The 
file has about 10 scenes in it.

Here are the errors:
 Executive: Loading version 1.744 session...
Selector-Error: Invalid selection name "on".
?_scene_EcLpoA HTH1 on 4gpk HTH2 with 4gpk peptide_lines<--
Traceback (most recent call last):
  File "/Applications/MacPyMOL.app/Contents/pymol/modules/pymol/__init__.py", 
line 262, in exec_deferred
cmd.load(a, quiet=0)
  File "/Applications/MacPyMOL.app/Contents/pymol/modules/pymol/importing.py", 
line 912, in load
partial=partial,steal=1)
  File "/Applications/MacPyMOL.app/Contents/pymol/modules/pymol/importing.py", 
line 96, in set_session
if not apply(a,(session,),{'_self':_self}): # don't stop on errors...try to 
complete anyway
  File "/Applications/MacPyMOL.app/Contents/pymol/modules/pymol/viewing.py", 
line 1296, in session_restore_scenes
_convert_legacy_scene(key, data, _self)
  File "/Applications/MacPyMOL.app/Contents/pymol/modules/pymol/viewing.py", 
line 1341, in _convert_legacy_scene
_self.show(rep_name, "?_scene_" + key + "_" + rep_name)
  File "/Applications/MacPyMOL.app/Contents/pymol/modules/pymol/viewing.py", 
line 593, in show
if _self._raising(r,_self): raise QuietException 
pymol.parsing.QuietException: 

Suggestions?  Do you want to examine the file?  If so contact me off list.

-Mark
_
Mark A. Saper, Ph.D.
Associate Professor of Biological Chemistry, University of Michigan
Currently on sabbatical:
Laboratory of Susan Buchanan, Ph.D.
NIDDK, National Institutes of Health, Bethesda, MD 20892-8030
  sa...@umich.edu  mobile (734) 276-6505





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Re: [PyMOL] 1.7.6.6 does not display a 1.7.4.4 .pse ifle.

2015-11-05 Thread Thomas Holder 
Hi Mark,

Thanks for the bug report. The stack trace is sufficient for us to reproduce 
the problem, no need to send the file.

Checking the code revealed: PyMOL never supported spaces in scene names. All 
versions before 1.7.6 silently ignored the problem but also couldn't restore 
the scene.

We can fix this in the next version to not throw an error.

Workaround: Open your file in 1.7.4, rename the scenes to not contain spaces, 
and save it again. Then 1.7.6 should load it without problems.

Cheers,
  Thomas

On 05 Nov 2015, at 20:20, Mark A Saper  wrote:

> I guess this is for Schrodinger representative. 
> 
> I have a .PSE file (21.8 Mbyte) that does not open properly in 1.7.6.6.  The 
> file has about 10 scenes in it.
> 
> Here are the errors:
> Executive: Loading version 1.744 session...
> Selector-Error: Invalid selection name "on".
> ?_scene_EcLpoA HTH1 on 4gpk HTH2 with 4gpk peptide_lines<--
> Traceback (most recent call last):
>  File "/Applications/MacPyMOL.app/Contents/pymol/modules/pymol/__init__.py", 
> line 262, in exec_deferred
>cmd.load(a, quiet=0)
>  File "/Applications/MacPyMOL.app/Contents/pymol/modules/pymol/importing.py", 
> line 912, in load
>partial=partial,steal=1)
>  File "/Applications/MacPyMOL.app/Contents/pymol/modules/pymol/importing.py", 
> line 96, in set_session
>if not apply(a,(session,),{'_self':_self}): # don't stop on errors...try 
> to complete anyway
>  File "/Applications/MacPyMOL.app/Contents/pymol/modules/pymol/viewing.py", 
> line 1296, in session_restore_scenes
>_convert_legacy_scene(key, data, _self)
>  File "/Applications/MacPyMOL.app/Contents/pymol/modules/pymol/viewing.py", 
> line 1341, in _convert_legacy_scene
>_self.show(rep_name, "?_scene_" + key + "_" + rep_name)
>  File "/Applications/MacPyMOL.app/Contents/pymol/modules/pymol/viewing.py", 
> line 593, in show
>if _self._raising(r,_self): raise QuietException 
> pymol.parsing.QuietException:  0x110905f38>
> 
> Suggestions?  Do you want to examine the file?  If so contact me off list.
> 
> -Mark
> _
> Mark A. Saper, Ph.D.  
> Associate Professor of Biological Chemistry, University of Michigan
> Currently on sabbatical:
> Laboratory of Susan Buchanan, Ph.D.
> NIDDK, National Institutes of Health, Bethesda, MD 20892-8030
>  sa...@umich.edu  mobile (734) 276-6505

-- 
Thomas Holder
PyMOL Principal Developer
Schrödinger, Inc.


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