Re: [PyMOL] ColorByRMSD script
I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? And should I expect to see my both protein structures colored in the PyMOL interface? Thank you! 2016-01-29 11:36 GMT-02:00 Guilherme Souza <gsouza...@gmail.com>: > I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? > And should I expect to see my both protein structures colored in the PyMOL > interface? > > 2016-01-29 11:35 GMT-02:00 Guilherme Souza <gsouza...@gmail.com>: > >> I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? >> And should I expect to see my both protein structures colored in the >> PyMOL interface? >> >> Thank you! >> >> 2016-01-29 11:09 GMT-02:00 Schubert, Carsten [JRDUS] < >> cschu...@its.jnj.com>: >> >>> Hi Guilherme, >>> >>> >>> >>> the script is not a plugin, so you cannot install it since it is missing >>> some software infrastructure to work as a plugin. Simply put the script >>> into the directory you are working in and run it via ‘run colorbyrmsd.py’ . >>> This will add the command to the scripting interface and you can run the >>> command like any other pymol command. See the wiki for the details in that >>> regards. >>> >>> >>> >>> HTH >>> >>> >>> >>> Carsten >>> >>> >>> >>> *From:* Guilherme Souza [mailto:gsouza...@gmail.com] >>> *Sent:* Friday, January 29, 2016 7:07 AM >>> *To:* pymol-users@lists.sourceforge.net >>> *Subject:* [PyMOL] ColorByRMSD script >>> >>> >>> >>> Hi. >>> >>> >>> >>> I'm a starter in PyMOL, and I'm trying to use this script, ColorByRMSD ( >>> http://www.pymolwiki.org/index.php/ColorByRMSD). However, I'm getting >>> the following error message, when I initialize PyMOL after installing the >>> plugin: >>> >>> >>> >>> Exception in plugin 'colorbyrmsd' -- Traceback follows... >>> >>> Traceback (most recent call last): >>> >>> File "C:\Program Files (x86)\PyMOL\PyMOL/modules\pmg_tk\PMGApp.py", >>> line 313, in initializePlugins >>> >>> __builtin__.__import__(mod_name) >>> >>> SyntaxError: future feature print_function is not defined >>> (colorbyrmsd.py, line 10) >>> >>> Error: unable to initialize plugin 'colorbyrmsd'. >>> >>> >>> >>> I'm using Python 2.7, and I've already checked '__future__' module, and >>> 'print_function' is there, so I don't know what could be causing this. >>> >>> >>> >>> I'd be glad if anyone could give me a help. >>> >>> >>> >>> Thank you. >>> >> >> > -- Site24x7 APM Insight: Get Deep Visibility into Application Performance APM + Mobile APM + RUM: Monitor 3 App instances at just $35/Month Monitor end-to-end web transactions and take corrective actions now Troubleshoot faster and improve end-user experience. Signup Now! http://pubads.g.doubleclick.net/gampad/clk?id=267308311=/4140___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] ColorByRMSD script
I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? And should I expect to see my both protein structures colored in the PyMOL interface? 2016-01-29 11:35 GMT-02:00 Guilherme Souza <gsouza...@gmail.com>: > I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? > And should I expect to see my both protein structures colored in the PyMOL > interface? > > Thank you! > > 2016-01-29 11:09 GMT-02:00 Schubert, Carsten [JRDUS] <cschu...@its.jnj.com > >: > >> Hi Guilherme, >> >> >> >> the script is not a plugin, so you cannot install it since it is missing >> some software infrastructure to work as a plugin. Simply put the script >> into the directory you are working in and run it via ‘run colorbyrmsd.py’ . >> This will add the command to the scripting interface and you can run the >> command like any other pymol command. See the wiki for the details in that >> regards. >> >> >> >> HTH >> >> >> >> Carsten >> >> >> >> *From:* Guilherme Souza [mailto:gsouza...@gmail.com] >> *Sent:* Friday, January 29, 2016 7:07 AM >> *To:* pymol-users@lists.sourceforge.net >> *Subject:* [PyMOL] ColorByRMSD script >> >> >> >> Hi. >> >> >> >> I'm a starter in PyMOL, and I'm trying to use this script, ColorByRMSD ( >> http://www.pymolwiki.org/index.php/ColorByRMSD). However, I'm getting >> the following error message, when I initialize PyMOL after installing the >> plugin: >> >> >> >> Exception in plugin 'colorbyrmsd' -- Traceback follows... >> >> Traceback (most recent call last): >> >> File "C:\Program Files (x86)\PyMOL\PyMOL/modules\pmg_tk\PMGApp.py", >> line 313, in initializePlugins >> >> __builtin__.__import__(mod_name) >> >> SyntaxError: future feature print_function is not defined >> (colorbyrmsd.py, line 10) >> >> Error: unable to initialize plugin 'colorbyrmsd'. >> >> >> >> I'm using Python 2.7, and I've already checked '__future__' module, and >> 'print_function' is there, so I don't know what could be causing this. >> >> >> >> I'd be glad if anyone could give me a help. >> >> >> >> Thank you. >> > > -- Site24x7 APM Insight: Get Deep Visibility into Application Performance APM + Mobile APM + RUM: Monitor 3 App instances at just $35/Month Monitor end-to-end web transactions and take corrective actions now Troubleshoot faster and improve end-user experience. Signup Now! http://pubads.g.doubleclick.net/gampad/clk?id=267308311=/4140___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] ColorByRMSD script
Yes, it seems that this is exactly the problem. I'm using PyMOL 1.3, and the Python version it is using is 2.5.4... Is there any way of fixing it without uninstalling my current version of PyMOL? 2016-01-29 11:57 GMT-02:00 Matthew Baumgartner <mp...@pitt.edu>: > What version of Pymol are you using? Pymol ships with it's own version of > python that is separate from your system python. > In the pymol command line, run: > > import sys > print sys.version > > That will tell you what python version pymol is using. > > HTH, > Matt > > > On 01/29/2016 08:55 AM, Guilherme Souza wrote: > > I've searched about this kind of error, and in every site I look, it seems > that it is caused by using Python <= 2.5, which is not my case. Is there > any chance that my PyMOL is using and older version of Python? > > 2016-01-29 11:46 GMT-02:00 Guilherme Souza <gsouza...@gmail.com>: > >> Okay. I did it, and kind of got the same error: >> >> PyMOL>run colorbyrmsd.py >> Traceback (most recent call last): >> File "C:\Program Files (x86)\PyMOL\PyMOL/modules\pymol\parser.py", line >> 338, in parse >> parsing.run_file(path,self.pymol_names,self.pymol_names) >> File "C:\Program Files (x86)\PyMOL\PyMOL/modules\pymol\parsing.py", >> line 455, in run_file >> execfile(file,global_ns,local_ns) >> SyntaxError: future feature print_function is not defined >> (colorbyrmsd.py, line 10) >> >> 2016-01-29 11:41 GMT-02:00 Matthew Baumgartner < <mp...@pitt.edu> >> mp...@pitt.edu>: >> >>> Hi, >>> You run the command 'run colorbyrmsd.py' in the Pymol command line. That >>> initializes the function in pymol. If everything goes well, you shouldn't >>> see anything (no errors). Then to use the command, type just 'colorbyrmsd >>> [args...]' into the command line. >>> >>> You can see the usage instructions in the wiki. >>> >>> HTH, >>> >>> Matt Baumgartner >>> >>> >>> On 01/29/2016 08:36 AM, Guilherme Souza wrote: >>> >>> I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? >>> And should I expect to see my both protein structures colored in the >>> PyMOL interface? >>> >>> Thank you! >>> >>> 2016-01-29 11:36 GMT-02:00 Guilherme Souza < <gsouza...@gmail.com> >>> gsouza...@gmail.com>: >>> >>>> I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? >>>> And should I expect to see my both protein structures colored in the >>>> PyMOL interface? >>>> >>>> 2016-01-29 11:35 GMT-02:00 Guilherme Souza < <gsouza...@gmail.com> >>>> gsouza...@gmail.com>: >>>> >>>>> I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? >>>>> And should I expect to see my both protein structures colored in the >>>>> PyMOL interface? >>>>> >>>>> Thank you! >>>>> >>>>> 2016-01-29 11:09 GMT-02:00 Schubert, Carsten [JRDUS] < >>>>> <cschu...@its.jnj.com>cschu...@its.jnj.com>: >>>>> >>>>>> Hi Guilherme, >>>>>> >>>>>> >>>>>> >>>>>> the script is not a plugin, so you cannot install it since it is >>>>>> missing some software infrastructure to work as a plugin. Simply put the >>>>>> script into the directory you are working in and run it via ‘run >>>>>> colorbyrmsd.py’ . This will add the command to the scripting interface >>>>>> and >>>>>> you can run the command like any other pymol command. See the wiki for >>>>>> the >>>>>> details in that regards. >>>>>> >>>>>> >>>>>> >>>>>> HTH >>>>>> >>>>>> >>>>>> >>>>>> Carsten >>>>>> >>>>>> >>>>>> >>>>>> *From:* Guilherme Souza [mailto: <gsouza...@gmail.com> >>>>>> gsouza...@gmail.com] >>>>>> *Sent:* Friday, January 29, 2016 7:07 AM >>>>>> *To:* <pymol-users@lists.sourceforge.net> >>>>>> pymol-users@lists.sourceforge.net >>>>>> *Subject:* [PyMOL] ColorByRMSD script >>>>>> >>>>>> >>>>>> >>>>>> Hi. >>>>>> >
Re: [PyMOL] ColorByRMSD script
I've searched about this kind of error, and in every site I look, it seems that it is caused by using Python <= 2.5, which is not my case. Is there any chance that my PyMOL is using and older version of Python? 2016-01-29 11:46 GMT-02:00 Guilherme Souza <gsouza...@gmail.com>: > Okay. I did it, and kind of got the same error: > > PyMOL>run colorbyrmsd.py > Traceback (most recent call last): > File "C:\Program Files (x86)\PyMOL\PyMOL/modules\pymol\parser.py", line > 338, in parse > parsing.run_file(path,self.pymol_names,self.pymol_names) > File "C:\Program Files (x86)\PyMOL\PyMOL/modules\pymol\parsing.py", line > 455, in run_file > execfile(file,global_ns,local_ns) > SyntaxError: future feature print_function is not defined (colorbyrmsd.py, > line 10) > > 2016-01-29 11:41 GMT-02:00 Matthew Baumgartner <mp...@pitt.edu>: > >> Hi, >> You run the command 'run colorbyrmsd.py' in the Pymol command line. That >> initializes the function in pymol. If everything goes well, you shouldn't >> see anything (no errors). Then to use the command, type just 'colorbyrmsd >> [args...]' into the command line. >> >> You can see the usage instructions in the wiki. >> >> HTH, >> >> Matt Baumgartner >> >> >> On 01/29/2016 08:36 AM, Guilherme Souza wrote: >> >> I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? >> And should I expect to see my both protein structures colored in the >> PyMOL interface? >> >> Thank you! >> >> 2016-01-29 11:36 GMT-02:00 Guilherme Souza <gsouza...@gmail.com>: >> >>> I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? >>> And should I expect to see my both protein structures colored in the >>> PyMOL interface? >>> >>> 2016-01-29 11:35 GMT-02:00 Guilherme Souza < <gsouza...@gmail.com> >>> gsouza...@gmail.com>: >>> >>>> I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? >>>> And should I expect to see my both protein structures colored in the >>>> PyMOL interface? >>>> >>>> Thank you! >>>> >>>> 2016-01-29 11:09 GMT-02:00 Schubert, Carsten [JRDUS] < >>>> cschu...@its.jnj.com>: >>>> >>>>> Hi Guilherme, >>>>> >>>>> >>>>> >>>>> the script is not a plugin, so you cannot install it since it is >>>>> missing some software infrastructure to work as a plugin. Simply put the >>>>> script into the directory you are working in and run it via ‘run >>>>> colorbyrmsd.py’ . This will add the command to the scripting interface and >>>>> you can run the command like any other pymol command. See the wiki for the >>>>> details in that regards. >>>>> >>>>> >>>>> >>>>> HTH >>>>> >>>>> >>>>> >>>>> Carsten >>>>> >>>>> >>>>> >>>>> *From:* Guilherme Souza [mailto: <gsouza...@gmail.com> >>>>> gsouza...@gmail.com] >>>>> *Sent:* Friday, January 29, 2016 7:07 AM >>>>> *To:* <pymol-users@lists.sourceforge.net> >>>>> pymol-users@lists.sourceforge.net >>>>> *Subject:* [PyMOL] ColorByRMSD script >>>>> >>>>> >>>>> >>>>> Hi. >>>>> >>>>> >>>>> >>>>> I'm a starter in PyMOL, and I'm trying to use this script, ColorByRMSD >>>>> ( <http://www.pymolwiki.org/index.php/ColorByRMSD> >>>>> http://www.pymolwiki.org/index.php/ColorByRMSD). However, I'm getting >>>>> the following error message, when I initialize PyMOL after installing the >>>>> plugin: >>>>> >>>>> >>>>> >>>>> Exception in plugin 'colorbyrmsd' -- Traceback follows... >>>>> >>>>> Traceback (most recent call last): >>>>> >>>>> File "C:\Program Files (x86)\PyMOL\PyMOL/modules\pmg_tk\PMGApp.py", >>>>> line 313, in initializePlugins >>>>> >>>>> __builtin__.__import__(mod_name) >>>>> >>>>> SyntaxError: future feature print_function is not defined >>>>> (colorbyrmsd.py, line 10) >>>>> >>>>> Error: unable to initialize plugin 'colorbyrmsd'. >>>>> >>>&g
Re: [PyMOL] ColorByRMSD script
Hi Guilherme, Simply remove the __future__ import line from the script. The script will work just fine in PyMOL 1.3. Cheers, Thomas On 29 Jan 2016, at 09:00, Guilherme Souza <gsouza...@gmail.com> wrote: > Yes, it seems that this is exactly the problem. I'm using PyMOL 1.3, and the > Python version it is using is 2.5.4... > Is there any way of fixing it without uninstalling my current version of > PyMOL? > > 2016-01-29 11:57 GMT-02:00 Matthew Baumgartner <mp...@pitt.edu>: > What version of Pymol are you using? Pymol ships with it's own version of > python that is separate from your system python. > In the pymol command line, run: > > import sys > print sys.version > > That will tell you what python version pymol is using. > > HTH, > Matt > > > On 01/29/2016 08:55 AM, Guilherme Souza wrote: >> I've searched about this kind of error, and in every site I look, it seems >> that it is caused by using Python <= 2.5, which is not my case. Is there any >> chance that my PyMOL is using and older version of Python? >> >> 2016-01-29 11:46 GMT-02:00 Guilherme Souza <gsouza...@gmail.com>: >> Okay. I did it, and kind of got the same error: >> >> PyMOL>run colorbyrmsd.py >> Traceback (most recent call last): >> File "C:\Program Files (x86)\PyMOL\PyMOL/modules\pymol\parser.py", line >> 338, in parse >> parsing.run_file(path,self.pymol_names,self.pymol_names) >> File "C:\Program Files (x86)\PyMOL\PyMOL/modules\pymol\parsing.py", line >> 455, in run_file >> execfile(file,global_ns,local_ns) >> SyntaxError: future feature print_function is not defined (colorbyrmsd.py, >> line 10) >> >> 2016-01-29 11:41 GMT-02:00 Matthew Baumgartner <mp...@pitt.edu>: >> Hi, >> You run the command 'run colorbyrmsd.py' in the Pymol command line. That >> initializes the function in pymol. If everything goes well, you shouldn't >> see anything (no errors). Then to use the command, type just 'colorbyrmsd >> [args...]' into the command line. >> >> You can see the usage instructions in the wiki. >> >> HTH, >> >> Matt Baumgartner >> >> >> On 01/29/2016 08:36 AM, Guilherme Souza wrote: >>> I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? >>> And should I expect to see my both protein structures colored in the PyMOL >>> interface? >>> >>> Thank you! >>> >>> 2016-01-29 11:36 GMT-02:00 Guilherme Souza <gsouza...@gmail.com>: >>> I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? >>> And should I expect to see my both protein structures colored in the PyMOL >>> interface? >>> >>> 2016-01-29 11:35 GMT-02:00 Guilherme Souza <gsouza...@gmail.com>: >>> I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? >>> And should I expect to see my both protein structures colored in the PyMOL >>> interface? >>> >>> Thank you! >>> >>> 2016-01-29 11:09 GMT-02:00 Schubert, Carsten [JRDUS] <cschu...@its.jnj.com>: >>> Hi Guilherme, >>> >>> >>> the script is not a plugin, so you cannot install it since it is missing >>> some software infrastructure to work as a plugin. Simply put the script >>> into the directory you are working in and run it via ‘run colorbyrmsd.py’ . >>> This will add the command to the scripting interface and you can run the >>> command like any other pymol command. See the wiki for the details in that >>> regards. >>> >>> >>> HTH >>> >>> >>> Carsten >>> >>> >>> From: Guilherme Souza [mailto:gsouza...@gmail.com] >>> Sent: Friday, January 29, 2016 7:07 AM >>> To: pymol-users@lists.sourceforge.net >>> Subject: [PyMOL] ColorByRMSD script >>> >>> >>> Hi. >>> >>> >>> I'm a starter in PyMOL, and I'm trying to use this script, ColorByRMSD >>> (http://www.pymolwiki.org/index.php/ColorByRMSD). >>> However, I'm getting the following error >>> message, when I initialize PyMOL after installing the plugin: >>> >>> >>> Exception in plugin 'colorbyrmsd' -- Traceback follows... >>> >>> Traceback (most recent call last): >>> >>> File "C:\Program Files (x86)\PyMOL\PyMOL/modules\pmg_tk\PMGApp.py", line >>> 313, in initializePlugins &g
Re: [PyMOL] ColorByRMSD script
Hi, You run the command 'run colorbyrmsd.py' in the Pymol command line. That initializes the function in pymol. If everything goes well, you shouldn't see anything (no errors). Then to use the command, type just 'colorbyrmsd [args...]' into the command line. You can see the usage instructions in the wiki. HTH, Matt Baumgartner On 01/29/2016 08:36 AM, Guilherme Souza wrote: I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? And should I expect to see my both protein structures colored in the PyMOL interface? Thank you! 2016-01-29 11:36 GMT-02:00 Guilherme Souza <gsouza...@gmail.com <mailto:gsouza...@gmail.com>>: I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? And should I expect to see my both protein structures colored in the PyMOL interface? 2016-01-29 11:35 GMT-02:00 Guilherme Souza <gsouza...@gmail.com <mailto:gsouza...@gmail.com>>: I'm sorry.. Where exactly am I supposed to type 'run colorbyrmsd.py'? And should I expect to see my both protein structures colored in the PyMOL interface? Thank you! 2016-01-29 11:09 GMT-02:00 Schubert, Carsten [JRDUS] <cschu...@its.jnj.com <mailto:cschu...@its.jnj.com>>: Hi Guilherme, the script is not a plugin, so you cannot install it since it is missing some software infrastructure to work as a plugin. Simply put the script into the directory you are working in and run it via ‘run colorbyrmsd.py’ . This will add the command to the scripting interface and you can run the command like any other pymol command. See the wiki for the details in that regards. HTH Carsten *From:*Guilherme Souza [mailto:gsouza...@gmail.com <mailto:gsouza...@gmail.com>] *Sent:* Friday, January 29, 2016 7:07 AM *To:* pymol-users@lists.sourceforge.net <mailto:pymol-users@lists.sourceforge.net> *Subject:* [PyMOL] ColorByRMSD script Hi. I'm a starter in PyMOL, and I'm trying to use this script, ColorByRMSD (http://www.pymolwiki.org/index.php/ColorByRMSD). However, I'm getting the following error message, when I initialize PyMOL after installing the plugin: Exception in plugin 'colorbyrmsd' -- Traceback follows... Traceback (most recent call last): File "C:\Program Files (x86)\PyMOL\PyMOL/modules\pmg_tk\PMGApp.py", line 313, in initializePlugins __builtin__.__import__(mod_name) SyntaxError: future feature print_function is not defined (colorbyrmsd.py, line 10) Error: unable to initialize plugin 'colorbyrmsd'. I'm using Python 2.7, and I've already checked '__future__' module, and 'print_function' is there, so I don't know what could be causing this. I'd be glad if anyone could give me a help. Thank you. -- Site24x7 APM Insight: Get Deep Visibility into Application Performance APM + Mobile APM + RUM: Monitor 3 App instances at just $35/Month Monitor end-to-end web transactions and take corrective actions now Troubleshoot faster and improve end-user experience. Signup Now! http://pubads.g.doubleclick.net/gampad/clk?id=267308311=/4140 ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Site24x7 APM Insight: Get Deep Visibility into Application Performance APM + Mobile APM + RUM: Monitor 3 App instances at just $35/Month Monitor end-to-end web transactions and take corrective actions now Troubleshoot faster and improve end-user experience. Signup Now! http://pubads.g.doubleclick.net/gampad/clk?id=267308311=/4140___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] ColorByRMSD script
Hi Guilherme, the script is not a plugin, so you cannot install it since it is missing some software infrastructure to work as a plugin. Simply put the script into the directory you are working in and run it via ‘run colorbyrmsd.py’ . This will add the command to the scripting interface and you can run the command like any other pymol command. See the wiki for the details in that regards. HTH Carsten From: Guilherme Souza [mailto:gsouza...@gmail.com] Sent: Friday, January 29, 2016 7:07 AM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] ColorByRMSD script Hi. I'm a starter in PyMOL, and I'm trying to use this script, ColorByRMSD (http://www.pymolwiki.org/index.php/ColorByRMSD). However, I'm getting the following error message, when I initialize PyMOL after installing the plugin: Exception in plugin 'colorbyrmsd' -- Traceback follows... Traceback (most recent call last): File "C:\Program Files (x86)\PyMOL\PyMOL/modules\pmg_tk\PMGApp.py", line 313, in initializePlugins __builtin__.__import__(mod_name) SyntaxError: future feature print_function is not defined (colorbyrmsd.py, line 10) Error: unable to initialize plugin 'colorbyrmsd'. I'm using Python 2.7, and I've already checked '__future__' module, and 'print_function' is there, so I don't know what could be causing this. I'd be glad if anyone could give me a help. Thank you. -- Site24x7 APM Insight: Get Deep Visibility into Application Performance APM + Mobile APM + RUM: Monitor 3 App instances at just $35/Month Monitor end-to-end web transactions and take corrective actions now Troubleshoot faster and improve end-user experience. Signup Now! http://pubads.g.doubleclick.net/gampad/clk?id=267308311=/4140___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
[PyMOL] ColorByRMSD script
Hi. I'm a starter in PyMOL, and I'm trying to use this script, ColorByRMSD ( http://www.pymolwiki.org/index.php/ColorByRMSD). However, I'm getting the following error message, when I initialize PyMOL after installing the plugin: Exception in plugin 'colorbyrmsd' -- Traceback follows... Traceback (most recent call last): File "C:\Program Files (x86)\PyMOL\PyMOL/modules\pmg_tk\PMGApp.py", line 313, in initializePlugins __builtin__.__import__(mod_name) SyntaxError: future feature print_function is not defined (colorbyrmsd.py, line 10) Error: unable to initialize plugin 'colorbyrmsd'. I'm using Python 2.7, and I've already checked '__future__' module, and 'print_function' is there, so I don't know what could be causing this. I'd be glad if anyone could give me a help. Thank you. -- Site24x7 APM Insight: Get Deep Visibility into Application Performance APM + Mobile APM + RUM: Monitor 3 App instances at just $35/Month Monitor end-to-end web transactions and take corrective actions now Troubleshoot faster and improve end-user experience. Signup Now! http://pubads.g.doubleclick.net/gampad/clk?id=267308311=/4140___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net