[PyMOL] Problem Compiling v 1.6.0.0 in 64 bit Debian Testing
I have just installed the 64 bit Debian Testing distribution in an Oracle VM on my laptop as a test bed. I successfully compiled v 1.6.0.0 in my 6 bit Debian Wheezy production OS. I didn't get any error messages from my laptop installation during the compilation process. However when run pymol only the viewer window opens! Here are the messages: computation@inga:~/Apps/pymol/bin$ ./pymol PyMOL(TM) Molecular Graphics System, Version 1.6.0.0. Copyright (c) Schrodinger, LLC. All Rights Reserved. Created by Warren L. DeLano, Ph.D. PyMOL is user-supported open-source software. Although some versions are freely available, PyMOL is not in the public domain. If PyMOL is helpful in your work or study, then please volunteer support for our ongoing efforts to create open and affordable scientific software by purchasing a PyMOL Maintenance and/or Support subscription. More information can be found at http://www.pymol.org;. Enter help for a list of commands. Enter help command-name for information on a specific command. Hit ESC anytime to toggle between text and graphics. Detected OpenGL version 2.0 or greater. Shaders available. Detected GLSL version 1.40. OpenGL Warning: No pincher, please call crStateSetCurrentPointers() in your SPU OpenGL graphics engine: GL_VENDOR: Humper GL_RENDERER: Chromium GL_VERSION: 2.1 Chromium 1.9 Traceback (most recent call last): File /home/computation/Apps/pymol/lib/python/pymol/__init__.py, line 448, in launch_gui __import__(self.invocation.options.gui) File /home/computation/Apps/pymol/lib/python/pmg_tk/__init__.py, line 22, in module from PMGApp import * File /home/computation/Apps/pymol/lib/python/pmg_tk/PMGApp.py, line 31, in module import Pmw ImportError: No module named Pmw Detected 4 CPU cores. Enabled multithreaded rendering. OpenGL Warning: No pincher, please call crStateSetCurrentPointers() in your SPU Unfortunately, I don't have the faintest idea as to what is missing. Any assistance will be appreciated. Thanks in advance. -- Stephen P. Molnar, Ph.D.Life is a fuzzy set Foundation for ChemistryStochastic and multivariate www.FoundationForChemistry.com (614)312-7528 (c) Skype: smolnar1 -- This SF.net email is sponsored by Windows: Build for Windows Store. http://p.sf.net/sfu/windows-dev2dev ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] Problem Compiling v 1.6.0.0 in 64 bit Debian Testing
Hi Stephen, On Tue, 2013-06-25 09:16 EDT, Stephen P. Molnar s.mol...@sbcglobal.net wrote: I have just installed the 64 bit Debian Testing distribution in an Oracle VM on my laptop as a test bed. I successfully compiled v 1.6.0.0 in my 6 bit Debian Wheezy production OS. I didn't get any error messages from my laptop installation during the compilation process. However when run pymol only the viewer window opens! Here are the messages: Traceback (most recent call last): File /home/computation/Apps/pymol/lib/python/pymol/__init__.py, line 448, in launch_gui __import__(self.invocation.options.gui) File /home/computation/Apps/pymol/lib/python/pmg_tk/__init__.py, line 22, in module from PMGApp import * File /home/computation/Apps/pymol/lib/python/pmg_tk/PMGApp.py, line 31, in module import Pmw ImportError: No module named Pmw Detected 4 CPU cores. Enabled multithreaded rendering. OpenGL Warning: No pincher, please call crStateSetCurrentPointers() in your SPU Unfortunately, I don't have the faintest idea as to what is missing. Any assistance will be appreciated. Thanks in advance. I would appear that you are just missing the python-pmw package on this machine, whereas it must have been present on your Wheezy version. Cheers, Rob -- Robert L. Campbell, Ph.D. Senior Research Associate/Adjunct Assistant Professor Dept. of Biomedical Molecular Sciences Botterell Hall Rm 644 Queen's University, Kingston, ON K7L 3N6 Canada Tel: 613-533-6821 robert.campb...@queensu.cahttp://pldserver1.biochem.queensu.ca/~rlc -- This SF.net email is sponsored by Windows: Build for Windows Store. http://p.sf.net/sfu/windows-dev2dev ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] Problem Compiling v 1.6.0.0 in 64 bit Debian Testing
On Tue, 25 Jun 2013 09:47:19 -0400 Robert Campbell robert.campb...@queensu.ca wrote: Hi Stephen, On Tue, 2013-06-25 09:16 EDT, Stephen P. Molnar s.mol...@sbcglobal.net wrote: I have just installed the 64 bit Debian Testing distribution in an Oracle VM on my laptop as a test bed. I successfully compiled v 1.6.0.0 in my 6 bit Debian Wheezy production OS. I didn't get any error messages from my laptop installation during the compilation process. However when run pymol only the viewer window opens! Here are the messages: Traceback (most recent call last): File /home/computation/Apps/pymol/lib/python/pymol/__init__.py, line 448, in launch_gui __import__(self.invocation.options.gui) File /home/computation/Apps/pymol/lib/python/pmg_tk/__init__.py, line 22, in module from PMGApp import * File /home/computation/Apps/pymol/lib/python/pmg_tk/PMGApp.py, line 31, in module import Pmw ImportError: No module named Pmw Detected 4 CPU cores. Enabled multithreaded rendering. OpenGL Warning: No pincher, please call crStateSetCurrentPointers() in your SPU Unfortunately, I don't have the faintest idea as to what is missing. Any assistance will be appreciated. Thanks in advance. I would appear that you are just missing the python-pmw package on this machine, whereas it must have been present on your Wheezy version. Cheers, Rob Rob Thanks for the suggestion. You were quite correct. Although, when I check with Synaptic python-pmw was installed I reinstalled it and the compilation worked correctly this time. Many thanks Steve -- Stephen P. Molnar, Ph.D.Life is a fuzzy set Foundation for ChemistryStochastic and multivariate www.FoundationForChemistry.com (614)312-7528 (c) Skype: smolnar1 -- This SF.net email is sponsored by Windows: Build for Windows Store. http://p.sf.net/sfu/windows-dev2dev ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
