Re: [Rd] SweaveInput + keep.source = TRUE trouble
Sorry, I forgot the sessionInfos:
devel:
R version 2.12.0 beta (2010-10-03 r53154)
Platform: x86_64-unknown-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
2.11:
R version 2.11.1 (2010-05-31)
x86_64-pc-linux-gnu
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
Claudia Beleites wrote:
Dear all,
I have trouble with R-beta sweaving files that include definitions with
\SweaveInput in combination with keep.source = TRUE
Symptom:
SInput is taken from too far down the input file (the shift is the
number of
lines of the included file). Is that known? Searching didn't turn up
anything, yet I think there are more people than just me using keep.source.
Example:
$ ~/tmp/R-beta/bin/R CMD Sweave baseline.Rnw &&
mv baseline.tex baseline.devel.tex &&
R CMD Sweave baseline.Rnw &&
mv baseline.tex baseline.2.11.tex &&
diff -u baseline.2.11.tex baseline.devel.tex
gives:
--- baseline.2.11.tex2010-10-05 11:33:49.0 +0200
+++ baseline.devel.tex2010-10-05 11:33:49.0 +0200
@@ -83,7 +83,7 @@
\verb+\SweaveOpts{keep.source = TRUE}+
\begin{Schunk}
\begin{Sinput}
-> 12
+> line 54
\end{Sinput}
\begin{Soutput}
[1] 12
@@ -106,7 +106,7 @@
line 63 chunk option keep.source = TRUE
\begin{Schunk}
\begin{Sinput}
-> 14
+> line 67
\end{Sinput}
\begin{Soutput}
[1] 14
I used yesterday's R-beta, and my system is Ubuntu 9.10 64 bit (though
that probably doesn't matter).
Building the example file I also found that \SweaveInput{} cannot be
followed by anything else on the line(not even a LaTeX comment).
\SweaveInput{x}y
complains that file xy is not found.
Best regards,
Claudia Beleites
__
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--
Claudia Beleites
Dipartimento dei Materiali e delle Risorse Naturali
Università degli Studi di Trieste
Via Alfonso Valerio 6/a
I-34127 Trieste
phone: +39 0 40 5 58-37 68
email: cbelei...@units.it
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Re: [Rd] SweaveInput + keep.source = TRUE trouble
On 05/10/2010 5:38 AM, Claudia Beleites wrote:
Dear all,
I have trouble with R-beta sweaving files that include definitions with
\SweaveInput in combination with keep.source = TRUE
Thanks for the report. I'll take a look.
Duncan Murdoch
Symptom:
SInput is taken from too far down the input file (the shift is the number of
lines of the included file). Is that known? Searching didn't turn up anything,
yet I think there are more people than just me using keep.source.
Example:
$ ~/tmp/R-beta/bin/R CMD Sweave baseline.Rnw &&
mv baseline.tex baseline.devel.tex &&
R CMD Sweave baseline.Rnw &&
mv baseline.tex baseline.2.11.tex &&
diff -u baseline.2.11.tex baseline.devel.tex
gives:
--- baseline.2.11.tex 2010-10-05 11:33:49.0 +0200
+++ baseline.devel.tex 2010-10-05 11:33:49.0 +0200
@@ -83,7 +83,7 @@
\verb+\SweaveOpts{keep.source = TRUE}+
\begin{Schunk}
\begin{Sinput}
-> 12
+> line 54
\end{Sinput}
\begin{Soutput}
[1] 12
@@ -106,7 +106,7 @@
line 63 chunk option keep.source = TRUE
\begin{Schunk}
\begin{Sinput}
-> 14
+> line 67
\end{Sinput}
\begin{Soutput}
[1] 14
I used yesterday's R-beta, and my system is Ubuntu 9.10 64 bit (though that
probably doesn't matter).
Building the example file I also found that \SweaveInput{} cannot be followed by
anything else on the line(not even a LaTeX comment).
\SweaveInput{x}y
complains that file xy is not found.
Best regards,
Claudia Beleites
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
__
R-devel@r-project.org mailing list
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Re: [Rd] SweaveInput + keep.source = TRUE trouble
This is fixed now in R-devel and the beta version. The fix isn't
perfect: if you use \SweaveInput, you lose the error reporting that
gives line numbers from the original file. It should be possible to
have both, but I think the changes to implement that are too large to
consider in a beta.
Duncan Murdoch
On 05/10/2010 5:38 AM, Claudia Beleites wrote:
Dear all,
I have trouble with R-beta sweaving files that include definitions with
\SweaveInput in combination with keep.source = TRUE
Symptom:
SInput is taken from too far down the input file (the shift is the number of
lines of the included file). Is that known? Searching didn't turn up anything,
yet I think there are more people than just me using keep.source.
Example:
$ ~/tmp/R-beta/bin/R CMD Sweave baseline.Rnw&&
mv baseline.tex baseline.devel.tex&&
R CMD Sweave baseline.Rnw&&
mv baseline.tex baseline.2.11.tex&&
diff -u baseline.2.11.tex baseline.devel.tex
gives:
--- baseline.2.11.tex 2010-10-05 11:33:49.0 +0200
+++ baseline.devel.tex 2010-10-05 11:33:49.0 +0200
@@ -83,7 +83,7 @@
\verb+\SweaveOpts{keep.source = TRUE}+
\begin{Schunk}
\begin{Sinput}
-> 12
+> line 54
\end{Sinput}
\begin{Soutput}
[1] 12
@@ -106,7 +106,7 @@
line 63 chunk option keep.source = TRUE
\begin{Schunk}
\begin{Sinput}
-> 14
+> line 67
\end{Sinput}
\begin{Soutput}
[1] 14
I used yesterday's R-beta, and my system is Ubuntu 9.10 64 bit (though that
probably doesn't matter).
Building the example file I also found that \SweaveInput{} cannot be followed by
anything else on the line(not even a LaTeX comment).
\SweaveInput{x}y
complains that file xy is not found.
Best regards,
Claudia Beleites
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
Re: [Rd] SweaveInput + keep.source = TRUE trouble
Thank you - works fine for me now.
Claudia
Duncan Murdoch wrote:
This is fixed now in R-devel and the beta version. The fix isn't
perfect: if you use \SweaveInput, you lose the error reporting that
gives line numbers from the original file. It should be possible to
have both, but I think the changes to implement that are too large to
consider in a beta.
Duncan Murdoch
On 05/10/2010 5:38 AM, Claudia Beleites wrote:
Dear all,
I have trouble with R-beta sweaving files that include definitions with
\SweaveInput in combination with keep.source = TRUE
Symptom:
SInput is taken from too far down the input file (the shift is the
number of
lines of the included file). Is that known? Searching didn't turn up
anything,
yet I think there are more people than just me using keep.source.
Example:
$ ~/tmp/R-beta/bin/R CMD Sweave baseline.Rnw&&
mv baseline.tex baseline.devel.tex&&
R CMD Sweave baseline.Rnw&&
mv baseline.tex baseline.2.11.tex&&
diff -u baseline.2.11.tex baseline.devel.tex
gives:
--- baseline.2.11.tex2010-10-05 11:33:49.0 +0200
+++ baseline.devel.tex2010-10-05 11:33:49.0 +0200
@@ -83,7 +83,7 @@
\verb+\SweaveOpts{keep.source = TRUE}+
\begin{Schunk}
\begin{Sinput}
-> 12
+> line 54
\end{Sinput}
\begin{Soutput}
[1] 12
@@ -106,7 +106,7 @@
line 63 chunk option keep.source = TRUE
\begin{Schunk}
\begin{Sinput}
-> 14
+> line 67
\end{Sinput}
\begin{Soutput}
[1] 14
I used yesterday's R-beta, and my system is Ubuntu 9.10 64 bit (though
that
probably doesn't matter).
Building the example file I also found that \SweaveInput{} cannot be
followed by
anything else on the line(not even a LaTeX comment).
\SweaveInput{x}y
complains that file xy is not found.
Best regards,
Claudia Beleites
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
--
Claudia Beleites
Dipartimento dei Materiali e delle Risorse Naturali
Università degli Studi di Trieste
Via Alfonso Valerio 6/a
I-34127 Trieste
phone: +39 0 40 5 58-37 68
email: cbelei...@units.it
__
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https://stat.ethz.ch/mailman/listinfo/r-devel
