Re: [R] Problem Compiling v-4.x.x
On 11/09/2021 04:52 AM, Duncan Murdoch wrote: On 08/11/2021 3:56 p.m., Stephen P. Molnar wrote: On 11/08/2021 03:15 PM, Duncan Murdoch wrote: On 08/11/2021 2:57 p.m., Stephen P. Molnar wrote: I have uptodate Debian Buster on my Linux platform and have been compiling R distros for quite some time, usually with success. This time I have encountered the same error in my attempts to compile v-4..1.2 and then, when that failed, I had the same error with v-4.1.0. The error in both cases was: /home/comp/Downloads/R Packages/R-4.1.0/R-4.1.0/etc/Makeconf:10: Packages/R-4.1.0/R-4.1.0/share/make/vars.mk: No such file or directory. I don't have the faintest idea as to what is going on, and, even worse, I don't know how to fix it. Help will be greatly appreciated. I think you'll need to describe what you did that led to this error. Duncan Murdoch True, very true. Sorroy for the omission. ./configure /make Hopefully Ivan's suggestion solves your problem. One thing I'd suggest: building in a different dir than the source. All you need is to put the source in some dir (e.g. "src"), switch to an empty dir, and run src/configure from there, followed by make. This makes for a cleaner separation of source and products. Duncan Murdoch That was certainly a red-faced forehead slapper!! I should have known better. I changed the name of ~/Downloads/R Packages to ~/Downloads/R_Packages and the problem went away. Many thanks to you all for your patience and solutions. -- Stephen P. Molnar, Ph.D. www.molecular-modeling.net 614.312.7528 (c) Skype: smolnar1 __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Problem Compiling v-4.x.x
On 11/08/2021 03:15 PM, Duncan Murdoch wrote: On 08/11/2021 2:57 p.m., Stephen P. Molnar wrote: I have uptodate Debian Buster on my Linux platform and have been compiling R distros for quite some time, usually with success. This time I have encountered the same error in my attempts to compile v-4..1.2 and then, when that failed, I had the same error with v-4.1.0. The error in both cases was: /home/comp/Downloads/R Packages/R-4.1.0/R-4.1.0/etc/Makeconf:10: Packages/R-4.1.0/R-4.1.0/share/make/vars.mk: No such file or directory. I don't have the faintest idea as to what is going on, and, even worse, I don't know how to fix it. Help will be greatly appreciated. I think you'll need to describe what you did that led to this error. Duncan Murdoch True, very true. Sorroy for the omission. ./configure /make -- Stephen P. Molnar, Ph.D. www.molecular-modeling.net 614.312.7528 (c) Skype: smolnar1 __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Problem Compiling v-4.x.x
I have uptodate Debian Buster on my Linux platform and have been compiling R distros for quite some time, usually with success. This time I have encountered the same error in my attempts to compile v-4..1.2 and then, when that failed, I had the same error with v-4.1.0. The error in both cases was: /home/comp/Downloads/R Packages/R-4.1.0/R-4.1.0/etc/Makeconf:10: Packages/R-4.1.0/R-4.1.0/share/make/vars.mk: No such file or directory. I don't have the faintest idea as to what is going on, and, even worse, I don't know how to fix it. Help will be greatly appreciated. Thanks in advance. -- Stephen P. Molnar, Ph.D. www.molecular-modeling.net 614.312.7528 (c) Skype: smolnar1 __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R Script Modification Questions
Thanks to the kind folks on this list, this is an elegant replacement for the clumsy R script that I that I wrote. However, I do have a few changes that I would like to make. The problem is that while I know how to make changes in Python, I am still bumbling around in R Code. The day-to-day changes in the data are in the cvs file downloaded in line 11 of the code. What I would like to do is use linetype, rather than color, in line 27. The date in the title of the plot , line 33, is the max value of the date in in line 14 and I would like to use that rather than edit the Script every time the date changes. I'd appreciate assistance in making these changes. Thanks in advance,. -- Stephen P. Molnar, Ph.D. www.molecular-modeling.net 614.312.7528 (c) Skype: smolnar1 __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Ggplot2 Line Problem
Many thanks. That solved the problem.
On 08/17/2020 01:49 AM, Rui Barradas wrote:
Hello,
This type of problem is almost always a data reshaping problem.
ggplot graphics work better if the data is in the long format and you
have 3 columns for counts, one column for each category. If you
reformat from the current wide format to the long format you will have
a date vector, a categorical variable and a counts variable.
In the code below just change geom_point to geom_line and the problem
is solved.
library(tidyverse)
library(lubridate)
datO <- read.csv("https://api.covidtracking.com/v1/states/oh/daily.csv;)
datO[ ,1] <- ymd(datO[ ,1])
dfO <- tibble::as_tibble(data.frame(date = datO[ ,"date"],
positive = datO[ ,"positive"],
negative = datO[ ,"negative"],
total = datO[ ,"total"]))
dfO %>%
pivot_longer(
cols = -date,
names_to = "cases",
values_to = "count"
) %>%
mutate(cases = factor(cases, levels = c("positive", "negative",
"total"))) %>%
ggplot(aes(date, count, color = cases)) +
geom_point() +
scale_color_manual(name = "Test",
labels = c("Positive", "Negative", "Total"),
values = c("red", "blue", "green")) +
ylim(0, 175) +
labs(x = "Date", y = "Number of Tests")+
ggtitle("COVID-19 Tests in Ohio \n (8/15/20)")+
theme_bw() +
theme(axis.text.x = element_text(angle = 30, hjust = 1),
plot.title = element_text(hjust = 0.5))
Hope this helps,
Rui Barradas
??s 02:00 de 17/08/20, Stephen P. Molnar escreveu:
I have cobbled together a short script to plot Covid-19 data.
setwd("~/Apps/Models/1-CoronaVirus")
library(tidyverse)
library(lubridate)
datO <- read.csv("https://api.covidtracking.com/v1/states/oh/daily.csv;)
datO[ ,1] <- ymd(datO[ ,1])
dfO <- tibble::as_tibble(data.frame(datO[ ,"date"],datO[
,"positive"],datO[ ,"negative"],datO[ ,"total"]))
dfO %>%
ggplot(aes(x = datO[ ,"date"],y = datO[ ,"positive"]))+
geom_point(color = 'red', size = 0.025)+
geom_point(y = datO[ ,"negative"], color = 'blue', size = 0.025)+
geom_point(y = datO[ ,"total"], color = "green", size = 0.025)+
theme(axis.text.x = element_text(angle=30, hjust=1))+
theme_bw()+
scale_y_continuous(limits = c(0,175))+
labs(x = "Date", y = "Number of Tests")+
ggtitle("COVID-19 Tests in Ohio \n (8/15/20)")+
theme(plot.title = element_text(hjust = 0.5))+
scale_fill_discrete(name = "Test", labels = c("Positive",
"Negative", "Total"))
Here is the plot:
but, if I want lines rather that the code (the aspplicable plines) uis:
ggplot(aes(x = datO[ ,"date"],y = datO[ ,"positive"]))+
geom_line(linetype = "solid",color = 'red')+
geom_line(linetype = "dotdash",y = datO[ ,"negative"], color =
'blue')+
geom_line(linetype = "twodash",y = datO[ ,"total"], color = "green")+
Now two of the plots are reversed. Google has not been a friend in
finding a solution.
Help will be much appreciated.
Thanks in advance
--
Stephen P. Molnar, Ph.D.
www.molecular-modeling.net
614.312.7528 (c)
Skype: smolnar1
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
[R] Ggplot2 Line Problem
I have cobbled together a short script to plot Covid-19 data.
setwd("~/Apps/Models/1-CoronaVirus")
library(tidyverse)
library(lubridate)
datO <- read.csv("https://api.covidtracking.com/v1/states/oh/daily.csv;)
datO[ ,1] <- ymd(datO[ ,1])
dfO <- tibble::as_tibble(data.frame(datO[ ,"date"],datO[
,"positive"],datO[ ,"negative"],datO[ ,"total"]))
dfO %>%
ggplot(aes(x = datO[ ,"date"],y = datO[ ,"positive"]))+
geom_point(color = 'red', size = 0.025)+
geom_point(y = datO[ ,"negative"], color = 'blue', size = 0.025)+
geom_point(y = datO[ ,"total"], color = "green", size = 0.025)+
theme(axis.text.x = element_text(angle=30, hjust=1))+
theme_bw()+
scale_y_continuous(limits = c(0,175))+
labs(x = "Date", y = "Number of Tests")+
ggtitle("COVID-19 Tests in Ohio \n (8/15/20)")+
theme(plot.title = element_text(hjust = 0.5))+
scale_fill_discrete(name = "Test", labels = c("Positive", "Negative",
"Total"))
Here is the plot:
but, if I want lines rather that the code (the aspplicable plines) uis:
ggplot(aes(x = datO[ ,"date"],y = datO[ ,"positive"]))+
geom_line(linetype = "solid",color = 'red')+
geom_line(linetype = "dotdash",y = datO[ ,"negative"], color = 'blue')+
geom_line(linetype = "twodash",y = datO[ ,"total"], color = "green")+
Now two of the plots are reversed. Google has not been a friend in
finding a solution.
Help will be much appreciated.
Thanks in advance
--
Stephen P. Molnar, Ph.D.
www.molecular-modeling.net
614.312.7528 (c)
Skype: smolnar1
__
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
[R] Date Conversion Problem
i have written an R script which allow me to plot the number of Covid-10
cases reported by he state of Ohio. In that se t of data the date format
is in the form -mm-dd.
My script uses:
datebreaks <- seq(as.Date("2020-01-01"), as.Date("2020-08-10"), by="1 week")
.
.
.
+ scale_x_date(breaks=datebreaks)
+ theme(axis.text.x = element_text(angle=30, hjust=1))
to plot the data.
The COVID Tracking Project publishes considerably more data than does
the state of Ohio. However, The project supplies daily statistics using
the date format MMDD.I have done some searching, but I can't seem to
find a solution (that I can understand).
How can I change the date forma from MMDD tp -MM-DD?
Thanks is advanced.
--
Stephen P. Molnar, Ph.D.
www.molecular-modeling.net
614.312.7528 (c)
Skype: smolnar1
__
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
[R] Missing Library
I have installed RStudio in my new implementation of Debian Buster. \ comp@AbNormal:~/Downloads/RStudio$ sudo -s dpkg -i rstudio-1.2.1335-amd64.deb (Reading database ... 149026 files and directories currently installed.) Preparing to unpack rstudio-1.2.1335-amd64.deb ... Unpacking rstudio (1.2.1335) over (1.2.1335) ... Setting up rstudio (1.2.1335) ... Processing triggers for desktop-file-utils (0.23-4) ... Processing triggers for mime-support (3.62) ... Processing triggers for hicolor-icon-theme (0.17-2) ... Processing triggers for shared-mime-info (1.10-1) ... comp@AbNormal:~$ export RSTUDIO_CHROMIUM_ARGUMENTS="--disable-gpu" comp@AbNormal:~$ /usr/bin/rstudio /usr/bin/rstudio: error while loading shared libraries: libssl.so.1.0.2: cannot open shared object file: No such file or directory The Stretch version of libssl is 1.1.1c-1 This is having a major impact on my research program and I really need a solution. Thanks in advance. -- Stephen P. Molnar, Ph.D.Life is a fuzzy set http://www.Molecular-Modeling.net Multivariate and stochastic 614.312.7528 (c) Skype: smolnar1 __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] RStudio and R version 3.0
On Fri, 05 Apr 2013 08:00:16 -0400
John Sorkin jsor...@grecc.umaryland.edu wrote:
Windows 7 32 bit
R 3.0
RStudio that previously worked with R versions prior to R3.0
Colleagues,
I just downloaded R 3.0. When I try to launch RStudio (which was
previously on my computer), I get a message, R Session has a fatal
error. Any suggestions for getting RStudio up and running would be
appreciated. Thank you, John
John David Sorkin M.D., Ph.D.
Chief, Biostatistics and Informatics
University of Maryland School of Medicine Division of Gerontology
Baltimore VA Medical Center
10 North Greene Street
GRECC (BT/18/GR)
Baltimore, MD 21201-1524
(Phone) 410-605-7119
(Fax) 410-605-7913 (Please call phone number above prior to faxing)
Confidentiality Statement:
This email message, including any attachments, is for ...{{dropped:18}}
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[R] Installing R-2.15.2 in Debian Wheezy/Testing
The current version of R that is available in Wheezy is 2.15.1. However, version 2.15.2 is available at CRAN sites. The site I use is http://cran.case.edu/bin/linux/debian which states: 'If you want to have up to date R on wheezy I propose to directly install Dirks packages from unstable (sid) by creating a file /etc/apt/preferences containing Package: * Pin: release a=testing Pin-Priority: 650 Package: * Pin: release a=unstable Pin-Priority: 600 and adding a line for unstable in /etc/apt/sources.list.' I assume that the preference file should be in /etc/apt and not in /etc/apt/preferences.d My question is what should be the format of the line in the sources.lists? Thanks in advance __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Problem Installing a Package
I have just installed the latest version of R on a openSUSE 12.1 system running on an ORacle VM VirtualBox and have encountered a problem with installing ChemometricsWithR. Here is the output: library(compiler) install.packages(ChemometricsWithR) Installing package(s) into ‘/home/computation/R/x86_64-unknown-linux-gnu- library/2.15’ (as ‘lib’ is unspecified) also installing the dependency ‘TIMP’ trying URL 'http://cran.case.edu/src/contrib/TIMP_1.10.2.tar.gz' Content type 'application/x-gzip' length 1103361 bytes (1.1 Mb) opened URL == downloaded 1.1 Mb trying URL 'http://cran.case.edu/src/contrib/ChemometricsWithR_0.1.5.tar.gz' Content type 'application/x-gzip' length 128302 bytes (125 Kb) opened URL == downloaded 125 Kb * installing *source* package ‘TIMP’ ... ** package ‘TIMP’ successfully unpacked and MD5 sums checked ** libs gcc -std=gnu99 -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ntr.c -o ntr.o gcc -std=gnu99 -shared -L/usr/local/lib64 -o TIMP.so ntr.o - L/usr/local/lib64/R/lib -lR installing to /home/computation/R/x86_64-unknown-linux-gnu- library/2.15/TIMP/libs ** R ** data ** inst ** preparing package for lazy loading Warning: S3 methods ‘$.tclvar’, ‘$-.tclvar’, ‘as.character.tclObj’, ‘as.character.tclVar’, ‘as.double.tclObj’, ‘as.integer.tclObj’, ‘as.logical.tclObj’, ‘as.raw.tclObj’, ‘print.tclObj’, ‘[[.tclArray’, ‘[[-.tclArray’, ‘$.tclArray’, ‘$-.tclArray’, ‘names.tclArray’, ‘names-.tclArray’, ‘length.tclArray’, ‘length-.tclArray’, ‘tclObj.tclVar’, ‘tclObj-.tclVar’, ‘tclvalue.default’, ‘tclvalue.tclObj’, ‘tclvalue.tclVar’, ‘tclvalue-.default’, ‘tclvalue-.tclVar’, ‘close.tkProgressBar’ were declared in NAMESPACE but not found Error : .onLoad failed in loadNamespace() for 'tcltk', details: call: fun(libname, pkgname) error: Tcl/Tk support is not available on this system Error : package ‘tcltk’ could not be loaded ERROR: lazy loading failed for package ‘TIMP’ * removing ‘/home/computation/R/x86_64-unknown-linux-gnu-library/2.15/TIMP’ Warning in install.packages : installation of package ‘TIMP’ had non-zero exit status ERROR: dependency ‘TIMP’ is not available for package ‘ChemometricsWithR’ * removing ‘/home/computation/R/x86_64-unknown-linux-gnu- library/2.15/ChemometricsWithR’ Warning in install.packages : installation of package ‘ChemometricsWithR’ had non-zero exit status The downloaded source packages are in ‘/tmp/RtmpPhC7gJ/downloaded_packages’ The openSUSE package installer didn't find a package Tcl/TK Assistance and advice will be much appreciated. Thanks in advance. -- Stephen P. Molnar, Ph.D. Life is a fuzzy set Foundation for Chemistry Stochastic and multivariate www.FoundationForChemistry.com (614)312-7528 (c) Skype: smolnar1 __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Virus Infection in colorspace_1.1-1.zip (R x64 2.14.1)
I keep finding the Win32\Huer virus in colorspace_1.1-1.zip for R x64 2.14.1 running MS Windows 7. As a result I am not able to use rattle or ChemometricsWithR. I have tried several different mirrors with the same result. Fortunately AVG has caught and quarantined the problem, but the colorspace package is not available. I can use the package on my Linux OS, but, of course, Linux isn't bothered by viruses. I'm posting this to the list as I am not sure just what to do with the information. Stephen P. Molnar, Ph.D. Life is a fuzzy set Foundation for Chemistry Stochastic and multivariate http://www.FoundationForChemistry.com (614)312-7528 (c) Skype: smolnar1 [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Psuedoinverse of a Non-square Matrix
Is there an R package for the psuedoinversion of non-square matrices, similiar to to pinv MATLAB function? Thanks in advance. -- Stephen P. Molnar, Ph.D.Life is a fuzzy set Foundation for ChemistryStochastic and multivarate http://www.FoundationForChemistry.com 614.312.7528 (c) __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Psuedoinverse of a Non-square Matrix
On Sat, 30 Apr 2011 10:53:00 -0700 (PDT) Berend Hasselman b...@xs4all.nl wrote: Stephen P Molnar wrote: Is there an R package for the psuedoinversion of non-square matrices, similiar to to pinv MATLAB function? ginv in package MASS pseudoinverse in package corpcor Berend-- View this message in context: http://r.789695.n4.nabble.com/Psuedoinverse-of-a-Non-square-Matrix-tp3486247p3486302.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Thanks -- Stephen P. Molnar, Ph.D.Life is a fuzzy set Foundation for ChemistryStochastic and multivarate http://www.FoundationForChemistry.com 614.312.7528 (c) __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Two Copies of Each Message
I receive two copies of every message posted to this list. How can I stop this? I have read the Primary Help web page and searched the achieves without finding an answer. Thanks in advance. Stephen P. Molnar, Ph.D. Life is a fuzzy set Foundation for Chemistry Stochastic and multivariate http://www.FoundationForChemistry.com [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Two Questions
Sorry for the somewhat nondescript subject line, but I have two questions: 1.What is a really good book on R for a nonprogrammer? 2. How do I open more than one R Graphics: Device 2(ACTIVE). That what is the R command that I can use to keep more than one plot open. I am running a script from a book on Chemometrics that results in more than one graph during the execution, but it seems that R deletes each graph when the script calls for the next plot. Thanks in advance Stephen P. Molnar, Ph.D. Life is a fuzzy set Foundation for Chemistry Stochastic and multivariate http://www.FoundationForChemistry.com [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Problem Installing rJava on MS Win 7 Platform
That's true. However, Java is installed on the machine.
On Thu, 7 Apr 2011 14:40:54 -0400
David Winsemius dwinsem...@comcast.net wrote:
He said Java, not rJava.
On Apr 7, 2011, at 11:51 AM, Stephen P Molnar wrote:
Thanks for the reply.
Yes, you are quite correct, but:
install.packages('rJava')
Warning in install.packages(rJava) :
argument 'lib' is missing: using
'C:\Users\Stephen\Documents/R/win64-library/2.11'
--- Please select a CRAN mirror for use in this session ---
Warning: unable to access index for repository
http://www.stats.ox.ac.uk/pub/RWin/bin/windows64/contrib/2.11
trying URL 'http://cran.case.edu/bin/windows64/contrib/2.11/rJava_0.8-5.zip'
Content type 'application/zip' length 658913 bytes (643 Kb)
opened URL
downloaded 643 Kb
package 'rJava' successfully unpacked and MD5 sums checked
The downloaded packages are in
C:\Users\Stephen\AppData\Local\Temp\Rtmpcy0hAb
\downloaded_packages
install.packages('C;\Users\Stephen\AppData\Local/Temp/Rtmpcy0hAb
\downloaded_
There is a semi-colon in that path above that looks wrong. You might
first want to check that all your PATH entries are recorded properly.
--
David.
$
Error: '\U' used without hex digits in character string starting C;
\U
So, obviously, at this point I am attempting something that R does
not like.
Stephen P. Molnar, Ph.D.
Life is a
fuzzy set
Foundation for Chemistry
Stochastic
and multivriate
http://www.FoundationForChemistry.com
-Original Message-
From: Uwe Ligges [mailto:lig...@statistik.tu-dortmund.de]
Sent: Thursday, April 07, 2011 11:34 AM
To: Stephen P Molnar
Cc: r-help@r-project.org
Subject: Re: [R] Problem Installing rJava on MS Win 7 Platform
You failed to install an appropriate Java version.
Best,
Uwe Ligges
On 07.04.2011 16:30, Stephen P Molnar wrote:
I'm a new R user and, frankly, this problem has got me stumped.
I'm using the 64 bit version of RGui and followed the installation
instructions on http://www.rforge.net/rJava/
Here is the result:
package 'rJava' successfully unpacked and MD5 sums checked
library(rJava)
Error in utils::readRegistry(key, HLM, 2) :
Registry key 'Software\JavaSoft\Java Runtime Environment' not found
Error in utils::readRegistry(key, HLM, 2) :
Registry key 'Software\JavaSoft\Java Development Kit' not found
Error : .onLoad failed in loadNamespace() for 'rJava', details:
call: fun(...)
error: JAVA_HOME cannot be found from the Registry
Error: package/namespace load failed for 'rJava'
I don't Have the faintest idea as t what I've done, or failed to do.
Assistance will be greatly appreciated.
Thanks in advance.
Stephen P. Molnar, Ph.D.
Life is
a
fuzzy set
Foundation for Chemistry
Stochastic
and multivriate
http://www.FoundationForChemistry.com
[[alternative HTML version deleted]]
__
R-help@r-project.org mailing list
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PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
__
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David Winsemius, MD
West Hartford, CT
--
Stephen P. Molnar, Ph.D.Life is a fuzzy set
Foundation for ChemistryStochastic and multivarate
http://www.FoundationForChemistry.com
614.312.7528 (c)
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and provide commented, minimal, self-contained, reproducible code.
[R] Problem Installing rJava on MS Win 7 Platform
I'm a new R user and, frankly, this problem has got me stumped. I'm using the 64 bit version of RGui and followed the installation instructions on http://www.rforge.net/rJava/ Here is the result: package 'rJava' successfully unpacked and MD5 sums checked library(rJava) Error in utils::readRegistry(key, HLM, 2) : Registry key 'Software\JavaSoft\Java Runtime Environment' not found Error in utils::readRegistry(key, HLM, 2) : Registry key 'Software\JavaSoft\Java Development Kit' not found Error : .onLoad failed in loadNamespace() for 'rJava', details: call: fun(...) error: JAVA_HOME cannot be found from the Registry Error: package/namespace load failed for 'rJava' I don't Have the faintest idea as t what I've done, or failed to do. Assistance will be greatly appreciated. Thanks in advance. Stephen P. Molnar, Ph.D. Life is a fuzzy set Foundation for Chemistry Stochastic and multivriate http://www.FoundationForChemistry.com [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Problem Installing rJava on MS Win 7 Platform
Thanks for the reply.
Yes, you are quite correct, but:
install.packages('rJava')
Warning in install.packages(rJava) :
argument 'lib' is missing: using
'C:\Users\Stephen\Documents/R/win64-library/2.11'
--- Please select a CRAN mirror for use in this session ---
Warning: unable to access index for repository
http://www.stats.ox.ac.uk/pub/RWin/bin/windows64/contrib/2.11
trying URL 'http://cran.case.edu/bin/windows64/contrib/2.11/rJava_0.8-5.zip'
Content type 'application/zip' length 658913 bytes (643 Kb)
opened URL
downloaded 643 Kb
package 'rJava' successfully unpacked and MD5 sums checked
The downloaded packages are in
C:\Users\Stephen\AppData\Local\Temp\Rtmpcy0hAb\downloaded_packages
install.packages('C;\Users\Stephen\AppData\Local/Temp/Rtmpcy0hAb\downloaded_
$
Error: '\U' used without hex digits in character string starting C;\U
So, obviously, at this point I am attempting something that R does not like.
Stephen P. Molnar, Ph.D. Life is a
fuzzy set
Foundation for Chemistry Stochastic
and multivriate
http://www.FoundationForChemistry.com
-Original Message-
From: Uwe Ligges [mailto:lig...@statistik.tu-dortmund.de]
Sent: Thursday, April 07, 2011 11:34 AM
To: Stephen P Molnar
Cc: r-help@r-project.org
Subject: Re: [R] Problem Installing rJava on MS Win 7 Platform
You failed to install an appropriate Java version.
Best,
Uwe Ligges
On 07.04.2011 16:30, Stephen P Molnar wrote:
I'm a new R user and, frankly, this problem has got me stumped.
I'm using the 64 bit version of RGui and followed the installation
instructions on http://www.rforge.net/rJava/
Here is the result:
package 'rJava' successfully unpacked and MD5 sums checked
library(rJava)
Error in utils::readRegistry(key, HLM, 2) :
Registry key 'Software\JavaSoft\Java Runtime Environment' not found
Error in utils::readRegistry(key, HLM, 2) :
Registry key 'Software\JavaSoft\Java Development Kit' not found
Error : .onLoad failed in loadNamespace() for 'rJava', details:
call: fun(...)
error: JAVA_HOME cannot be found from the Registry
Error: package/namespace load failed for 'rJava'
I don't Have the faintest idea as t what I've done, or failed to do.
Assistance will be greatly appreciated.
Thanks in advance.
Stephen P. Molnar, Ph.D. Life is
a
fuzzy set
Foundation for Chemistry
Stochastic
and multivriate
http://www.FoundationForChemistry.com
[[alternative HTML version deleted]]
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
[R] Problem Installing R-Commander
I am trying to install R Commander in my R installation on a laptop running the 64 bit version of Windows 7 Professional. I was running R as the Administrator. The downloads proceed normally via CRAN, but then I get the following error messages: package 'slam' successfully unpacked and MD5 sums checked package 'fBasics' successfully unpacked and MD5 sums checked Error in normalizePath(path) : path[1]=E:\Program Files\R\R-2.11.1-x64\library/fBasics: The system cannot find the file specified and, sure enough, when I look fBasics in missing. Please advise. Thanks in advance Stephen P. Molnar, Ph.D. Life is a fuzzy set Foundation for Chemistry Stochastic and multivriate http://www.FoundationForChemistry.com [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
