Re: [R] how to install R 3.0.1

2013-06-01 Thread Uwe Ligges



On 01.06.2013 02:02, Ranjan Maitra wrote:

On Fri, 31 May 2013 18:10:19 -0500 Robert Baer rb...@atsu.edu wrote:


On 5/31/2013 11:59 AM, Ranjan Maitra wrote:

Hi John,

I suspect you may be missing a c()?

On Fri, 31 May 2013 06:05:45 -0800 John Kane jrkrid...@inbox.com
wrote:


paks  -  install.packages( Hmisc, plyr)

paks - install.packages( c(Hmisc, plyr))



install.packages(paks)
You can use the command  library()  to get a list of what is installed on your 
machine.

Is it possible to get this as a vector of only the package names, or
is post-processing the output of library() the only way out?

Do you mean something like:
paks = library()$results[,1]
save(paks, file = 'paks.RData')
Rob


Exactly! Then

install.packages(library()$results[,1])

does all the updated installs in one shot.



Why do you want to reinstall all packages?

I'd go for
udpate.packages(checkBuilt=TRUE)
if a reinstallation after an update of R is what you are aiming at.

Best,
Uwe Ligges




Thanks!
Ranjan


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Re: [R] how to install R 3.0.1

2013-06-01 Thread Uwe Ligges



On 01.06.2013 14:58, Uwe Ligges wrote:



On 01.06.2013 02:02, Ranjan Maitra wrote:

On Fri, 31 May 2013 18:10:19 -0500 Robert Baer rb...@atsu.edu wrote:


On 5/31/2013 11:59 AM, Ranjan Maitra wrote:

Hi John,

I suspect you may be missing a c()?

On Fri, 31 May 2013 06:05:45 -0800 John Kane jrkrid...@inbox.com
wrote:


paks  -  install.packages( Hmisc, plyr)

paks - install.packages( c(Hmisc, plyr))



install.packages(paks)
You can use the command  library()  to get a list of what is
installed on your machine.

Is it possible to get this as a vector of only the package names, or
is post-processing the output of library() the only way out?

Do you mean something like:
paks = library()$results[,1]
save(paks, file = 'paks.RData')
Rob


Exactly! Then

install.packages(library()$results[,1])

does all the updated installs in one shot.



Why do you want to reinstall all packages?

I'd go for
udpate.packages(checkBuilt=TRUE)
if a reinstallation after an update of R is what you are aiming at.



 and forgot to add: installed.packages() is certainly more 
appropriate than library() to find the names of installed packages (with 
less overhead and hence faster).


Best,
Uwe Ligges


Best,
Uwe Ligges




Thanks!
Ranjan


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Re: [R] how to install R 3.0.1

2013-06-01 Thread John Kane
Thanks Uwe. installed.packages()  is definitely faster and better. 

 I don't think I even knew installed.packages() existed. I think I gave up 
looking for something like it a year or so ago.

John Kane
Kingston ON Canada


 -Original Message-
 From: lig...@statistik.tu-dortmund.de
 Sent: Sat, 1 Jun 2013 14:59:22 +0200
 To: r-h...@stat.math.ethz.ch
 Subject: Re: [R] how to install R 3.0.1
 
 
 
 On 01.06.2013 14:58, Uwe Ligges wrote:
 
 
 On 01.06.2013 02:02, Ranjan Maitra wrote:
 On Fri, 31 May 2013 18:10:19 -0500 Robert Baer rb...@atsu.edu wrote:
 
 On 5/31/2013 11:59 AM, Ranjan Maitra wrote:
 Hi John,
 
 I suspect you may be missing a c()?
 
 On Fri, 31 May 2013 06:05:45 -0800 John Kane jrkrid...@inbox.com
 wrote:
 
 paks  -  install.packages( Hmisc, plyr)
 paks - install.packages( c(Hmisc, plyr))
 
 
 install.packages(paks)
 You can use the command  library()  to get a list of what is
 installed on your machine.
 Is it possible to get this as a vector of only the package names, or
 is post-processing the output of library() the only way out?
 Do you mean something like:
 paks = library()$results[,1]
 save(paks, file = 'paks.RData')
 Rob
 
 Exactly! Then
 
 install.packages(library()$results[,1])
 
 does all the updated installs in one shot.
 
 
 Why do you want to reinstall all packages?
 
 I'd go for
 udpate.packages(checkBuilt=TRUE)
 if a reinstallation after an update of R is what you are aiming at.
 
 
  and forgot to add: installed.packages() is certainly more
 appropriate than library() to find the names of installed packages (with
 less overhead and hence faster).
 
 Best,
 Uwe Ligges
 
 Best,
 Uwe Ligges
 
 
 
 Thanks!
 Ranjan
 
 
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Re: [R] how to install R 3.0.1

2013-06-01 Thread Ranjan Maitra
On Sat, 1 Jun 2013 14:58:22 +0200 Uwe Ligges
lig...@statistik.tu-dortmund.de wrote:

 
 
 On 01.06.2013 02:02, Ranjan Maitra wrote:
  On Fri, 31 May 2013 18:10:19 -0500 Robert Baer rb...@atsu.edu wrote:
 
  On 5/31/2013 11:59 AM, Ranjan Maitra wrote:
  Hi John,
 
  I suspect you may be missing a c()?
 
  On Fri, 31 May 2013 06:05:45 -0800 John Kane jrkrid...@inbox.com
  wrote:
 
  paks  -  install.packages( Hmisc, plyr)
  paks - install.packages( c(Hmisc, plyr))
 
 
  install.packages(paks)
  You can use the command  library()  to get a list of what is installed 
  on your machine.
  Is it possible to get this as a vector of only the package names, or
  is post-processing the output of library() the only way out?
  Do you mean something like:
  paks = library()$results[,1]
  save(paks, file = 'paks.RData')
  Rob
 
  Exactly! Then
 
  install.packages(library()$results[,1])
 
  does all the updated installs in one shot.
 
 
 Why do you want to reinstall all packages?
 
 I'd go for
 udpate.packages(checkBuilt=TRUE)
 if a reinstallation after an update of R is what you are aiming at.

Actually, this did not work (on multiple architectures from 2.15.2 to
3.0.0 as well as from 3.0.0 to 3.0.1) for me in the sense that it only
offered to update a very small subset packages, and that too, without
their dependencies. Which resulted in a failure also for a large subset
of the small subset of packages.

As an example, consider the following:

 update.packages(checkBuilt = TRUE)
 

(nothing to update, since I updated some things yesterday, and did a
manual installation when the dependencies, eg lme4 comes to mind,
failed)

 installed.packages()[,Built]

shows that AnalyzeFMRI was Built for 3.0.0.

Perhaps not a big deal from 3.0.0 to 3.0.1 but was a big deal from
2.15.2 to 3.0.0.

But after doing a 

? install.packages(AnalyzeFMRI)

I get that 

AnalyzeFMRI is Built for 3.0.1.

Trying:

 install.packages(installed.packages()[,1])

I get that all are updated to 3.0.1, except for some, like XLConnectJars
which are not available.

(I was surprised: it may be a bug, but is definitely a desirable
feature that should be considered for inclusion.)

Perhaps the better thing to do would have been to:

 update.packages(installed.packages()[,1])

but I did not think about that earlier.

Many thanks and best wishes,
Ranjan



 Best,
 Uwe Ligges
 
 
 
  Thanks!
  Ranjan
 
  
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Re: [R] how to install R 3.0.1

2013-06-01 Thread Uwe Ligges



On 01.06.2013 15:58, Ranjan Maitra wrote:

On Sat, 1 Jun 2013 14:58:22 +0200 Uwe Ligges
lig...@statistik.tu-dortmund.de wrote:




On 01.06.2013 02:02, Ranjan Maitra wrote:

On Fri, 31 May 2013 18:10:19 -0500 Robert Baer rb...@atsu.edu wrote:


On 5/31/2013 11:59 AM, Ranjan Maitra wrote:

Hi John,

I suspect you may be missing a c()?

On Fri, 31 May 2013 06:05:45 -0800 John Kane jrkrid...@inbox.com
wrote:


paks  -  install.packages( Hmisc, plyr)

paks - install.packages( c(Hmisc, plyr))



 install.packages(paks)
You can use the command  library()  to get a list of what is installed on your 
machine.

Is it possible to get this as a vector of only the package names, or
is post-processing the output of library() the only way out?

Do you mean something like:
paks = library()$results[,1]
save(paks, file = 'paks.RData')
Rob


Exactly! Then

install.packages(library()$results[,1])

does all the updated installs in one shot.



Why do you want to reinstall all packages?

I'd go for
udpate.packages(checkBuilt=TRUE)
if a reinstallation after an update of R is what you are aiming at.


Actually, this did not work (on multiple architectures from 2.15.2 to
3.0.0 as well as from 3.0.0 to 3.0.1) for me in the sense that it only
offered to update a very small subset packages, and that too, without
their dependencies. Which resulted in a failure also for a large subset
of the small subset of packages.

As an example, consider the following:


update.packages(checkBuilt = TRUE)



(nothing to update, since I updated some things yesterday, and did a
manual installation when the dependencies, eg lme4 comes to mind,
failed)


installed.packages()[,Built]


shows that AnalyzeFMRI was Built for 3.0.0.

Perhaps not a big deal from 3.0.0 to 3.0.1


Right, it won't reinstall here since that is not necessary and the 
package sources were not changed, hence it safes you time and bandwidth.




but was a big deal from
2.15.2 to 3.0.0.



Right, and it would have updated there



But after doing a

? install.packages(AnalyzeFMRI)

I get that

AnalyzeFMRI is Built for 3.0.1.



Yes, sure.




Trying:


install.packages(installed.packages()[,1])


I get that all are updated to 3.0.1, except for some, like XLConnectJars
which are not available.



This is not a CRAN package and binaries may not be available in the 
repository you tried to get it from (Omegahat) or you have not selected 
Omegahat as a repository via setRepositories().

You can try to install from sources, though.

As I said before, replacing all your packages unconditionally wastes 
bandwidth. There are rarely situations where the other updates are 
really needed.


Best,
Uwe Ligges




(I was surprised: it may be a bug, but is definitely a desirable
feature that should be considered for inclusion.)

Perhaps the better thing to do would have been to:


update.packages(installed.packages()[,1])


but I did not think about that earlier.

Many thanks and best wishes,
Ranjan




Best,
Uwe Ligges




Thanks!
Ranjan


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Re: [R] how to install R 3.0.1

2013-06-01 Thread Ranjan Maitra
On Sat, 1 Jun 2013 16:51:19 +0200 Uwe Ligges
lig...@statistik.tu-dortmund.de wrote:

 
 
 On 01.06.2013 15:58, Ranjan Maitra wrote:
  On Sat, 1 Jun 2013 14:58:22 +0200 Uwe Ligges
  lig...@statistik.tu-dortmund.de wrote:
 
 
 
  On 01.06.2013 02:02, Ranjan Maitra wrote:
  On Fri, 31 May 2013 18:10:19 -0500 Robert Baer rb...@atsu.edu wrote:
 
  On 5/31/2013 11:59 AM, Ranjan Maitra wrote:
  Hi John,
 
  I suspect you may be missing a c()?
 
  On Fri, 31 May 2013 06:05:45 -0800 John Kane jrkrid...@inbox.com
  wrote:
 
  paks  -  install.packages( Hmisc, plyr)
  paks - install.packages( c(Hmisc, plyr))
 
 
   install.packages(paks)
  You can use the command  library()  to get a list of what is installed 
  on your machine.
  Is it possible to get this as a vector of only the package names, or
  is post-processing the output of library() the only way out?
  Do you mean something like:
  paks = library()$results[,1]
  save(paks, file = 'paks.RData')
  Rob
 
  Exactly! Then
 
  install.packages(library()$results[,1])
 
  does all the updated installs in one shot.
 
 
  Why do you want to reinstall all packages?
 
  I'd go for
  udpate.packages(checkBuilt=TRUE)
  if a reinstallation after an update of R is what you are aiming at.
 
  Actually, this did not work (on multiple architectures from 2.15.2 to
  3.0.0 as well as from 3.0.0 to 3.0.1) for me in the sense that it only
  offered to update a very small subset packages, and that too, without
  their dependencies. Which resulted in a failure also for a large subset
  of the small subset of packages.
 
  As an example, consider the following:
 
  update.packages(checkBuilt = TRUE)
 
 
  (nothing to update, since I updated some things yesterday, and did a
  manual installation when the dependencies, eg lme4 comes to mind,
  failed)
 
  installed.packages()[,Built]
 
  shows that AnalyzeFMRI was Built for 3.0.0.
 
  Perhaps not a big deal from 3.0.0 to 3.0.1
 
 Right, it won't reinstall here since that is not necessary and the 
 package sources were not changed, hence it safes you time and bandwidth.
 
 
  but was a big deal from
  2.15.2 to 3.0.0.
 
 
 Right, and it would have updated there

But it did not, and that is the point.

Ranjan


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Re: [R] how to install R 3.0.1

2013-05-31 Thread John Kane
http://www.r-project.org/ and go from there I imagine.

You did not supply any information about your operating system so it is 
difficult to give more detailed advice.

John Kane
Kingston ON Canada


 -Original Message-
 From: upananda.p...@gmail.com
 Sent: Fri, 31 May 2013 18:11:28 +0530
 To: r-help@r-project.org
 Subject: [R] how to install R 3.0.1
 
 Hi All,
 
 I want to switch over from 2.13.1 to 3.0.1. Is it advisable to switch
 over.
 I am using Windows Vista.
 
 Please suggest me installation procedure as i am not very comfortable in
 Installing R and If any good documentations can be found, Please send me
 the link.
 
 Thanks and Regards,
 Upananda
 
 --
 
 
 You may delay, but time will not.
 
 
 Research Scholar
 alternative mail id: up...@iitkgp.ac.in
 Department of HSS, IIT KGP
 KGP
 
   [[alternative HTML version deleted]]
 
 __
 R-help@r-project.org mailing list
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 and provide commented, minimal, self-contained, reproducible code.


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Re: [R] how to install R 3.0.1

2013-05-31 Thread Upananda Pani
Hi John,

I am using Microsoft Window Vista Service Pack 2.

Regards,
Upananda


On Fri, May 31, 2013 at 6:47 PM, John Kane jrkrid...@inbox.com wrote:

 http://www.r-project.org/ and go from there I imagine.

 You did not supply any information about your operating system so it is
 difficult to give more detailed advice.

 John Kane
 Kingston ON Canada


  -Original Message-
  From: upananda.p...@gmail.com
  Sent: Fri, 31 May 2013 18:11:28 +0530
  To: r-help@r-project.org
  Subject: [R] how to install R 3.0.1
 
  Hi All,
 
  I want to switch over from 2.13.1 to 3.0.1. Is it advisable to switch
  over.
  I am using Windows Vista.
 
  Please suggest me installation procedure as i am not very comfortable in
  Installing R and If any good documentations can be found, Please send me
  the link.
 
  Thanks and Regards,
  Upananda
 
  --
 
 
  You may delay, but time will not.
 
 
  Research Scholar
  alternative mail id: up...@iitkgp.ac.in
  Department of HSS, IIT KGP
  KGP
 
[[alternative HTML version deleted]]
 
  __
  R-help@r-project.org mailing list
  https://stat.ethz.ch/mailman/listinfo/r-help
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-- 


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Research Scholar
alternative mail id: up...@iitkgp.ac.in
Department of HSS, IIT KGP
KGP

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Re: [R] how to install R 3.0.1

2013-05-31 Thread John Kane
Sorry I misread your post.  Just download the 3.0.1 for Windows and install.  
You will need to reinstall any additional packages that you have installed.

John Kane
Kingston ON Canada


 -Original Message-
 From: upananda.p...@gmail.com
 Sent: Fri, 31 May 2013 18:11:28 +0530
 To: r-help@r-project.org
 Subject: [R] how to install R 3.0.1
 
 Hi All,
 
 I want to switch over from 2.13.1 to 3.0.1. Is it advisable to switch
 over.
 I am using Windows Vista.
 
 Please suggest me installation procedure as i am not very comfortable in
 Installing R and If any good documentations can be found, Please send me
 the link.
 
 Thanks and Regards,
 Upananda
 
 --
 
 
 You may delay, but time will not.
 
 
 Research Scholar
 alternative mail id: up...@iitkgp.ac.in
 Department of HSS, IIT KGP
 KGP
 
   [[alternative HTML version deleted]]
 
 __
 R-help@r-project.org mailing list
 https://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide
 http://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.


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Re: [R] how to install R 3.0.1

2013-05-31 Thread Upananda Pani
Hi John,

Thanks for your reply .How to Update all the packages ( Which i am already
using ) automatically to the new version.?


With regards,
Upananda





On Fri, May 31, 2013 at 7:01 PM, John Kane jrkrid...@inbox.com wrote:

 Sorry I misread your post.  Just download the 3.0.1 for Windows and
 install.  You will need to reinstall any additional packages that you have
 installed.

 John Kane
 Kingston ON Canada


  -Original Message-
  From: upananda.p...@gmail.com
  Sent: Fri, 31 May 2013 18:11:28 +0530
  To: r-help@r-project.org
  Subject: [R] how to install R 3.0.1
 
  Hi All,
 
  I want to switch over from 2.13.1 to 3.0.1. Is it advisable to switch
  over.
  I am using Windows Vista.
 
  Please suggest me installation procedure as i am not very comfortable in
  Installing R and If any good documentations can be found, Please send me
  the link.
 
  Thanks and Regards,
  Upananda
 
  --
 
 
  You may delay, but time will not.
 
 
  Research Scholar
  alternative mail id: up...@iitkgp.ac.in
  Department of HSS, IIT KGP
  KGP
 
[[alternative HTML version deleted]]
 
  __
  R-help@r-project.org mailing list
  https://stat.ethz.ch/mailman/listinfo/r-help
  PLEASE do read the posting guide
  http://www.R-project.org/posting-guide.html
  and provide commented, minimal, self-contained, reproducible code.

 
 FREE ONLINE PHOTOSHARING - Share your photos online with your friends and
 family!
 Visit http://www.inbox.com/photosharing to find out more!





-- 


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Research Scholar
alternative mail id: up...@iitkgp.ac.in
Department of HSS, IIT KGP
KGP

[[alternative HTML version deleted]]

__
R-help@r-project.org mailing list
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Re: [R] how to install R 3.0.1

2013-05-31 Thread Steve Friedman
You can't. You must copy them to the new installation directory. After that
you can use the update package command to check for and install the
upgrades packages.
On May 31, 2013 9:43 AM, Upananda Pani upananda.p...@gmail.com wrote:

 Hi John,

 Thanks for your reply .How to Update all the packages ( Which i am already
 using ) automatically to the new version.?


 With regards,
 Upananda





 On Fri, May 31, 2013 at 7:01 PM, John Kane jrkrid...@inbox.com wrote:

  Sorry I misread your post.  Just download the 3.0.1 for Windows and
  install.  You will need to reinstall any additional packages that you
 have
  installed.
 
  John Kane
  Kingston ON Canada
 
 
   -Original Message-
   From: upananda.p...@gmail.com
   Sent: Fri, 31 May 2013 18:11:28 +0530
   To: r-help@r-project.org
   Subject: [R] how to install R 3.0.1
  
   Hi All,
  
   I want to switch over from 2.13.1 to 3.0.1. Is it advisable to switch
   over.
   I am using Windows Vista.
  
   Please suggest me installation procedure as i am not very comfortable
 in
   Installing R and If any good documentations can be found, Please send
 me
   the link.
  
   Thanks and Regards,
   Upananda
  
   --
  
  
   You may delay, but time will not.
  
  
   Research Scholar
   alternative mail id: up...@iitkgp.ac.in
   Department of HSS, IIT KGP
   KGP
  
 [[alternative HTML version deleted]]
  
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 --


 You may delay, but time will not.


 Research Scholar
 alternative mail id: up...@iitkgp.ac.in
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 KGP

 [[alternative HTML version deleted]]

 __
 R-help@r-project.org mailing list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


Re: [R] how to install R 3.0.1

2013-05-31 Thread John Kane
There may be a better way but my practice is to simply create a vector  of the 
optional packages that I am using and run an install.packages:

Example:

paks  -  install.packages( Hmisc, plyr)
  
  install.packages(paks)

You can use the command  library() 
to get a list of what is installed on your machine.

John Kane
Kingston ON Canada


 -Original Message-
 From: upananda.p...@gmail.com
 Sent: Fri, 31 May 2013 19:10:39 +0530
 To:
 Subject: Re: [R] how to install R 3.0.1
 
 Hi John,
 
 Thanks for your reply .How to Update all the packages ( Which i am
 already
 using ) automatically to the new version.?
 
 
 With regards,
 Upananda
 
 
 
 
 
 On Fri, May 31, 2013 at 7:01 PM, John Kane jrkrid...@inbox.com wrote:
 
 Sorry I misread your post.  Just download the 3.0.1 for Windows and
 install.  You will need to reinstall any additional packages that you
 have
 installed.
 
 John Kane
 Kingston ON Canada
 
 
 -Original Message-
 From: upananda.p...@gmail.com
 Sent: Fri, 31 May 2013 18:11:28 +0530
 To: r-help@r-project.org
 Subject: [R] how to install R 3.0.1
 
 Hi All,
 
 I want to switch over from 2.13.1 to 3.0.1. Is it advisable to switch
 over.
 I am using Windows Vista.
 
 Please suggest me installation procedure as i am not very comfortable
 in
 Installing R and If any good documentations can be found, Please send
 me
 the link.
 
 Thanks and Regards,
 Upananda
 
 --
 
 
 You may delay, but time will not.
 
 
 Research Scholar
 alternative mail id: up...@iitkgp.ac.in
 Department of HSS, IIT KGP
 KGP
 
   [[alternative HTML version deleted]]
 
 __
 R-help@r-project.org mailing list
 https://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide
 http://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.
 
 
 FREE ONLINE PHOTOSHARING - Share your photos online with your friends
 and
 family!
 Visit http://www.inbox.com/photosharing to find out more!
 
 
 
 
 
 --
 
 
 You may delay, but time will not.
 
 
 Research Scholar
 alternative mail id: up...@iitkgp.ac.in
 Department of HSS, IIT KGP
 KGP
 
   [[alternative HTML version deleted]]
 
 __
 R-help@r-project.org mailing list
 https://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide
 http://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.


FREE 3D MARINE AQUARIUM SCREENSAVER - Watch dolphins, sharks  orcas on your 
desktop!

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


Re: [R] how to install R 3.0.1

2013-05-31 Thread Steve Friedman
Thanks for the clarification.
On May 31, 2013 10:19 AM, Prof Brian Ripley rip...@stats.ox.ac.uk wrote:

 On 31/05/2013 14:44, Steve Friedman wrote:

 You can't. You must copy them to the new installation directory. After
 that
 you can use the update package command to check for and install the
 upgrades packages.


 Not so if you organized your packages sensibly in a separate library. See
 http://cran.r-project.org/bin/**windows/base/rw-FAQ.html#What_**
 0027s-the-best-way-to-upgrade_**003fhttp://cran.r-project.org/bin/windows/base/rw-FAQ.html#What_0027s-the-best-way-to-upgrade_003f(and
  the rest of that FAQ).



  On May 31, 2013 9:43 AM, Upananda Pani upananda.p...@gmail.com wrote:

  Hi John,

 Thanks for your reply .How to Update all the packages ( Which i am
 already
 using ) automatically to the new version.?


 With regards,
 Upananda





 On Fri, May 31, 2013 at 7:01 PM, John Kane jrkrid...@inbox.com wrote:

  Sorry I misread your post.  Just download the 3.0.1 for Windows and
 install.  You will need to reinstall any additional packages that you

 have

 installed.

 John Kane
 Kingston ON Canada


  -Original Message-
 From: upananda.p...@gmail.com
 Sent: Fri, 31 May 2013 18:11:28 +0530
 To: r-help@r-project.org
 Subject: [R] how to install R 3.0.1

 Hi All,

 I want to switch over from 2.13.1 to 3.0.1. Is it advisable to switch
 over.
 I am using Windows Vista.

 Please suggest me installation procedure as i am not very comfortable

 in

 Installing R and If any good documentations can be found, Please send

 me

 the link.

 Thanks and Regards,
 Upananda

 --


 You may delay, but time will not.


 Research Scholar
 alternative mail id: up...@iitkgp.ac.in
 Department of HSS, IIT KGP
 KGP

[[alternative HTML version deleted]]

 __**
 R-help@r-project.org mailing list
 https://stat.ethz.ch/mailman/**listinfo/r-helphttps://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide
 http://www.R-project.org/**posting-guide.htmlhttp://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.


 __**__
 FREE ONLINE PHOTOSHARING - Share your photos online with your friends
 and
 family!
 Visit 
 http://www.inbox.com/**photosharinghttp://www.inbox.com/photosharingto 
 find out more!





 --


 You may delay, but time will not.


 Research Scholar
 alternative mail id: up...@iitkgp.ac.in
 Department of HSS, IIT KGP
 KGP

  [[alternative HTML version deleted]]

 __**
 R-help@r-project.org mailing list
 https://stat.ethz.ch/mailman/**listinfo/r-helphttps://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide
 http://www.R-project.org/**posting-guide.htmlhttp://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.


 [[alternative HTML version deleted]]

 __**
 R-help@r-project.org mailing list
 https://stat.ethz.ch/mailman/**listinfo/r-helphttps://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide http://www.R-project.org/**
 posting-guide.html http://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.



 --
 Brian D. Ripley,  rip...@stats.ox.ac.uk
 Professor of Applied Statistics,  
 http://www.stats.ox.ac.uk/~**ripley/http://www.stats.ox.ac.uk/~ripley/
 University of Oxford, Tel:  +44 1865 272861 (self)
 1 South Parks Road, +44 1865 272866 (PA)
 Oxford OX1 3TG, UKFax:  +44 1865 272595


[[alternative HTML version deleted]]

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


Re: [R] how to install R 3.0.1

2013-05-31 Thread Prof Brian Ripley

On 31/05/2013 14:44, Steve Friedman wrote:

You can't. You must copy them to the new installation directory. After that
you can use the update package command to check for and install the
upgrades packages.


Not so if you organized your packages sensibly in a separate library. 
See 
http://cran.r-project.org/bin/windows/base/rw-FAQ.html#What_0027s-the-best-way-to-upgrade_003f 
(and the rest of that FAQ).





On May 31, 2013 9:43 AM, Upananda Pani upananda.p...@gmail.com wrote:


Hi John,

Thanks for your reply .How to Update all the packages ( Which i am already
using ) automatically to the new version.?


With regards,
Upananda





On Fri, May 31, 2013 at 7:01 PM, John Kane jrkrid...@inbox.com wrote:


Sorry I misread your post.  Just download the 3.0.1 for Windows and
install.  You will need to reinstall any additional packages that you

have

installed.

John Kane
Kingston ON Canada



-Original Message-
From: upananda.p...@gmail.com
Sent: Fri, 31 May 2013 18:11:28 +0530
To: r-help@r-project.org
Subject: [R] how to install R 3.0.1

Hi All,

I want to switch over from 2.13.1 to 3.0.1. Is it advisable to switch
over.
I am using Windows Vista.

Please suggest me installation procedure as i am not very comfortable

in

Installing R and If any good documentations can be found, Please send

me

the link.

Thanks and Regards,
Upananda

--


You may delay, but time will not.


Research Scholar
alternative mail id: up...@iitkgp.ac.in
Department of HSS, IIT KGP
KGP

   [[alternative HTML version deleted]]

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.



FREE ONLINE PHOTOSHARING - Share your photos online with your friends and
family!
Visit http://www.inbox.com/photosharing to find out more!






--


You may delay, but time will not.


Research Scholar
alternative mail id: up...@iitkgp.ac.in
Department of HSS, IIT KGP
KGP

 [[alternative HTML version deleted]]

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.



[[alternative HTML version deleted]]

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.




--
Brian D. Ripley,  rip...@stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel:  +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UKFax:  +44 1865 272595

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


Re: [R] how to install R 3.0.1

2013-05-31 Thread Upananda Pani
When I am updating packages, I got the following output:

The downloaded binary packages are in
C:\Users\upani\AppData\Local\Temp\RtmpmC7A9U\downloaded_packages
So What to do after this ?


On Fri, May 31, 2013 at 7:49 PM, Steve Friedman skfgla...@gmail.com wrote:

 Thanks for the clarification.
 On May 31, 2013 10:19 AM, Prof Brian Ripley rip...@stats.ox.ac.uk
 wrote:

 On 31/05/2013 14:44, Steve Friedman wrote:

 You can't. You must copy them to the new installation directory. After
 that
 you can use the update package command to check for and install the
 upgrades packages.


 Not so if you organized your packages sensibly in a separate library. See
 http://cran.r-project.org/bin/**windows/base/rw-FAQ.html#What_**
 0027s-the-best-way-to-upgrade_**003fhttp://cran.r-project.org/bin/windows/base/rw-FAQ.html#What_0027s-the-best-way-to-upgrade_003f(and
  the rest of that FAQ).



  On May 31, 2013 9:43 AM, Upananda Pani upananda.p...@gmail.com
 wrote:

  Hi John,

 Thanks for your reply .How to Update all the packages ( Which i am
 already
 using ) automatically to the new version.?


 With regards,
 Upananda





 On Fri, May 31, 2013 at 7:01 PM, John Kane jrkrid...@inbox.com wrote:

  Sorry I misread your post.  Just download the 3.0.1 for Windows and
 install.  You will need to reinstall any additional packages that you

 have

 installed.

 John Kane
 Kingston ON Canada


  -Original Message-
 From: upananda.p...@gmail.com
 Sent: Fri, 31 May 2013 18:11:28 +0530
 To: r-help@r-project.org
 Subject: [R] how to install R 3.0.1

 Hi All,

 I want to switch over from 2.13.1 to 3.0.1. Is it advisable to switch
 over.
 I am using Windows Vista.

 Please suggest me installation procedure as i am not very comfortable

 in

 Installing R and If any good documentations can be found, Please send

 me

 the link.

 Thanks and Regards,
 Upananda

 --


 You may delay, but time will not.


 Research Scholar
 alternative mail id: up...@iitkgp.ac.in
 Department of HSS, IIT KGP
 KGP

[[alternative HTML version deleted]]

 __**
 R-help@r-project.org mailing list
 https://stat.ethz.ch/mailman/**listinfo/r-helphttps://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide
 http://www.R-project.org/**posting-guide.htmlhttp://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.


 __**__
 FREE ONLINE PHOTOSHARING - Share your photos online with your friends
 and
 family!
 Visit 
 http://www.inbox.com/**photosharinghttp://www.inbox.com/photosharingto 
 find out more!





 --


 You may delay, but time will not.


 Research Scholar
 alternative mail id: up...@iitkgp.ac.in
 Department of HSS, IIT KGP
 KGP

  [[alternative HTML version deleted]]

 __**
 R-help@r-project.org mailing list
 https://stat.ethz.ch/mailman/**listinfo/r-helphttps://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide
 http://www.R-project.org/**posting-guide.htmlhttp://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.


 [[alternative HTML version deleted]]

 __**
 R-help@r-project.org mailing list
 https://stat.ethz.ch/mailman/**listinfo/r-helphttps://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide http://www.R-project.org/**
 posting-guide.html http://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.



 --
 Brian D. Ripley,  rip...@stats.ox.ac.uk
 Professor of Applied Statistics,  
 http://www.stats.ox.ac.uk/~**ripley/http://www.stats.ox.ac.uk/~ripley/
 University of Oxford, Tel:  +44 1865 272861 (self)
 1 South Parks Road, +44 1865 272866 (PA)
 Oxford OX1 3TG, UKFax:  +44 1865 272595




-- 


You may delay, but time will not.


Research Scholar
alternative mail id: up...@iitkgp.ac.in
Department of HSS, IIT KGP
KGP

[[alternative HTML version deleted]]

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


Re: [R] how to install R 3.0.1

2013-05-31 Thread Prof Brian Ripley

On 31/05/2013 16:53, Upananda Pani wrote:

When I am updating packages, I got the following output:

The downloaded binary packages are in
 C:\Users\upani\AppData\Local\Temp\RtmpmC7A9U\downloaded_packages
So What to do after this ?


Nothing.  These will be removed when you quit R.




On Fri, May 31, 2013 at 7:49 PM, Steve Friedman skfgla...@gmail.com
mailto:skfgla...@gmail.com wrote:

Thanks for the clarification.

On May 31, 2013 10:19 AM, Prof Brian Ripley rip...@stats.ox.ac.uk
mailto:rip...@stats.ox.ac.uk wrote:

On 31/05/2013 14:44, Steve Friedman wrote:

You can't. You must copy them to the new installation
directory. After that
you can use the update package command to check for and
install the
upgrades packages.


Not so if you organized your packages sensibly in a separate
library. See

http://cran.r-project.org/bin/__windows/base/rw-FAQ.html#What___0027s-the-best-way-to-upgrade___003f

http://cran.r-project.org/bin/windows/base/rw-FAQ.html#What_0027s-the-best-way-to-upgrade_003f
(and the rest of that FAQ).



On May 31, 2013 9:43 AM, Upananda Pani
upananda.p...@gmail.com mailto:upananda.p...@gmail.com
wrote:

Hi John,

Thanks for your reply .How to Update all the packages (
Which i am already
using ) automatically to the new version.?


With regards,
Upananda





On Fri, May 31, 2013 at 7:01 PM, John Kane
jrkrid...@inbox.com mailto:jrkrid...@inbox.com wrote:

Sorry I misread your post.  Just download the 3.0.1
for Windows and
install.  You will need to reinstall any additional
packages that you

have

installed.

John Kane
Kingston ON Canada


-Original Message-
From: upananda.p...@gmail.com
mailto:upananda.p...@gmail.com
Sent: Fri, 31 May 2013 18:11:28 +0530
To: r-help@r-project.org
mailto:r-help@r-project.org
Subject: [R] how to install R 3.0.1

Hi All,

I want to switch over from 2.13.1 to 3.0.1. Is
it advisable to switch
over.
I am using Windows Vista.

Please suggest me installation procedure as i am
not very comfortable

in

Installing R and If any good documentations can
be found, Please send

me

the link.

Thanks and Regards,
Upananda

--


You may delay, but time will not.


Research Scholar
alternative mail id: up...@iitkgp.ac.in
mailto:up...@iitkgp.ac.in
Department of HSS, IIT KGP
KGP

[[alternative HTML version deleted]]


R-help@r-project.org
mailto:R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/__listinfo/r-help
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide
http://www.R-project.org/__posting-guide.html
http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained,
reproducible code.



__
FREE ONLINE PHOTOSHARING - Share your photos online
with your friends and
family!
Visit http://www.inbox.com/__photosharing
http://www.inbox.com/photosharing to find out more!





--


You may delay, but time will not.


Research Scholar
alternative mail id: up...@iitkgp.ac.in
mailto:up...@iitkgp.ac.in
Department of HSS, IIT KGP
KGP

  [[alternative HTML version deleted]]


R-help@r-project.org mailto:R-help@r-project.org
mailing list
https://stat.ethz.ch/mailman/__listinfo/r-help
 

Re: [R] how to install R 3.0.1

2013-05-31 Thread Upananda Pani
Does it mean the packages are already updated ?


On Fri, May 31, 2013 at 9:35 PM, Prof Brian Ripley rip...@stats.ox.ac.ukwrote:

 On 31/05/2013 16:53, Upananda Pani wrote:

 When I am updating packages, I got the following output:

 The downloaded binary packages are in
  C:\Users\upani\AppData\Local\**Temp\RtmpmC7A9U\downloaded_**
 packages
 So What to do after this ?


 Nothing.  These will be removed when you quit R.



 On Fri, May 31, 2013 at 7:49 PM, Steve Friedman skfgla...@gmail.com
 mailto:skfgla...@gmail.com wrote:

 Thanks for the clarification.

 On May 31, 2013 10:19 AM, Prof Brian Ripley rip...@stats.ox.ac.uk
 mailto:rip...@stats.ox.ac.uk** wrote:

 On 31/05/2013 14:44, Steve Friedman wrote:

 You can't. You must copy them to the new installation
 directory. After that
 you can use the update package command to check for and
 install the
 upgrades packages.


 Not so if you organized your packages sensibly in a separate
 library. See
 http://cran.r-project.org/bin/**__windows/base/rw-FAQ.html#**
 What___0027s-the-best-way-to-**upgrade___003fhttp://cran.r-project.org/bin/__windows/base/rw-FAQ.html#What___0027s-the-best-way-to-upgrade___003f

 http://cran.r-project.org/**bin/windows/base/rw-FAQ.html#**
 What_0027s-the-best-way-to-**upgrade_003fhttp://cran.r-project.org/bin/windows/base/rw-FAQ.html#What_0027s-the-best-way-to-upgrade_003f
 
 (and the rest of that FAQ).



 On May 31, 2013 9:43 AM, Upananda Pani
 upananda.p...@gmail.com 
 mailto:upananda.pani@gmail.**comupananda.p...@gmail.com
 

 wrote:

 Hi John,

 Thanks for your reply .How to Update all the packages (
 Which i am already
 using ) automatically to the new version.?


 With regards,
 Upananda





 On Fri, May 31, 2013 at 7:01 PM, John Kane
 jrkrid...@inbox.com mailto:jrkrid...@inbox.com wrote:

 Sorry I misread your post.  Just download the 3.0.1
 for Windows and
 install.  You will need to reinstall any additional
 packages that you

 have

 installed.

 John Kane
 Kingston ON Canada


 -Original Message-
 From: upananda.p...@gmail.com
 
 mailto:upananda.pani@gmail.**comupananda.p...@gmail.com
 
 Sent: Fri, 31 May 2013 18:11:28 +0530
 To: r-help@r-project.org
 mailto:r-help@r-project.org
 Subject: [R] how to install R 3.0.1

 Hi All,

 I want to switch over from 2.13.1 to 3.0.1. Is
 it advisable to switch
 over.
 I am using Windows Vista.

 Please suggest me installation procedure as i am
 not very comfortable

 in

 Installing R and If any good documentations can
 be found, Please send

 me

 the link.

 Thanks and Regards,
 Upananda

 --


 You may delay, but time will not.


 Research Scholar
 alternative mail id: up...@iitkgp.ac.in
 mailto:up...@iitkgp.ac.in

 Department of HSS, IIT KGP
 KGP

 [[alternative HTML version deleted]]

 __**
 __
 R-help@r-project.org
 mailto:R-help@r-project.org mailing list
 
 https://stat.ethz.ch/mailman/_**_listinfo/r-helphttps://stat.ethz.ch/mailman/__listinfo/r-help

 
 https://stat.ethz.ch/mailman/**listinfo/r-helphttps://stat.ethz.ch/mailman/listinfo/r-help
 
 PLEASE do read the posting guide
 
 http://www.R-project.org/__**posting-guide.htmlhttp://www.R-project.org/__posting-guide.html

 
 http://www.R-project.org/**posting-guide.htmlhttp://www.R-project.org/posting-guide.html
 
 and provide commented, minimal, self-contained,
 reproducible code.


 __**
 __**__

 FREE ONLINE PHOTOSHARING - Share your photos online
 with your friends and
 family!
 

Re: [R] how to install R 3.0.1

2013-05-31 Thread Berend Hasselman

On 31-05-2013, at 18:18, Upananda Pani upananda.p...@gmail.com wrote:

 Does it mean the packages are already updated ?
 

Yes. Unless you got error messages.
Try library(…) with one of the packages.

Berend

__
R-help@r-project.org mailing list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


Re: [R] how to install R 3.0.1

2013-05-31 Thread Ranjan Maitra
Hi John,

I suspect you may be missing a c()?

On Fri, 31 May 2013 06:05:45 -0800 John Kane jrkrid...@inbox.com
wrote:

 paks  -  install.packages( Hmisc, plyr)

paks - install.packages( c(Hmisc, plyr))

   
   install.packages(paks)

 You can use the command  library()  to get a list of what is installed on 
 your machine.

Is it possible to get this as a vector of only the package names, or
is post-processing the output of library() the only way out?

Ranjan


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FREE 3D MARINE AQUARIUM SCREENSAVER - Watch dolphins, sharks  orcas on your 
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__
R-help@r-project.org mailing list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


Re: [R] how to install R 3.0.1

2013-05-31 Thread John Kane
Arh, a sloppy copy and paste. 

Thanks

John Kane
Kingston ON Canada


 -Original Message-
 From: maitra.mbox.igno...@inbox.com
 Sent: Fri, 31 May 2013 11:59:05 -0500
 To: r-h...@stat.math.ethz.ch
 Subject: Re: [R] how to install R 3.0.1
 
 Hi John,
 
 I suspect you may be missing a c()?
 
 On Fri, 31 May 2013 06:05:45 -0800 John Kane jrkrid...@inbox.com
 wrote:
 
 paks  -  install.packages( Hmisc, plyr)
 
 paks - install.packages( c(Hmisc, plyr))
 
 
   install.packages(paks)
 
 You can use the command  library()  to get a list of what is installed
 on your machine.
 
 Is it possible to get this as a vector of only the package names, or
 is post-processing the output of library() the only way out?
 
 Ranjan
 
 
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Re: [R] how to install R 3.0.1

2013-05-31 Thread Upananda Pani
Hi All,

Thanks all for your kind help else it would have been very tough to go
ahead. I convey my regards to all of you.

Upananda


On Fri, May 31, 2013 at 10:35 PM, John Kane jrkrid...@inbox.com wrote:

 Arh, a sloppy copy and paste.

 Thanks

 John Kane
 Kingston ON Canada


  -Original Message-
  From: maitra.mbox.igno...@inbox.com
  Sent: Fri, 31 May 2013 11:59:05 -0500
  To: r-h...@stat.math.ethz.ch
  Subject: Re: [R] how to install R 3.0.1
 
  Hi John,
 
  I suspect you may be missing a c()?
 
  On Fri, 31 May 2013 06:05:45 -0800 John Kane jrkrid...@inbox.com
  wrote:
 
  paks  -  install.packages( Hmisc, plyr)
 
  paks - install.packages( c(Hmisc, plyr))
 
 
install.packages(paks)
 
  You can use the command  library()  to get a list of what is installed
  on your machine.
 
  Is it possible to get this as a vector of only the package names, or
  is post-processing the output of library() the only way out?
 
  Ranjan
 
 
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  Important Notice: This mailbox is ignored: e-mails are set to be
  deleted on receipt. For those needing to send personal or professional
  e-mail, please use appropriate addresses.
 
  
  FREE 3D MARINE AQUARIUM SCREENSAVER - Watch dolphins, sharks  orcas on
  your desktop!
 
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  http://www.R-project.org/posting-guide.html
  and provide commented, minimal, self-contained, reproducible code.

 
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Re: [R] how to install R 3.0.1

2013-05-31 Thread Robert Baer

On 5/31/2013 11:59 AM, Ranjan Maitra wrote:

Hi John,

I suspect you may be missing a c()?

On Fri, 31 May 2013 06:05:45 -0800 John Kane jrkrid...@inbox.com
wrote:


paks  -  install.packages( Hmisc, plyr)

paks - install.packages( c(Hmisc, plyr))



   install.packages(paks)
You can use the command  library()  to get a list of what is installed on your 
machine.

Is it possible to get this as a vector of only the package names, or
is post-processing the output of library() the only way out?

Do you mean something like:
paks = library()$results[,1]
save(paks, file = 'paks.RData')
Rob

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A. T. Still University of Health Sciences
Kirksville, MO 63501 USA

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Re: [R] how to install R 3.0.1

2013-05-31 Thread Ranjan Maitra
On Fri, 31 May 2013 18:10:19 -0500 Robert Baer rb...@atsu.edu wrote:

 On 5/31/2013 11:59 AM, Ranjan Maitra wrote:
  Hi John,
 
  I suspect you may be missing a c()?
 
  On Fri, 31 May 2013 06:05:45 -0800 John Kane jrkrid...@inbox.com
  wrote:
 
  paks  -  install.packages( Hmisc, plyr)
  paks - install.packages( c(Hmisc, plyr))
 
  
 install.packages(paks)
  You can use the command  library()  to get a list of what is installed on 
  your machine.
  Is it possible to get this as a vector of only the package names, or
  is post-processing the output of library() the only way out?
 Do you mean something like:
 paks = library()$results[,1]
 save(paks, file = 'paks.RData')
 Rob

Exactly! Then

install.packages(library()$results[,1])

does all the updated installs in one shot.

Thanks!
Ranjan


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