[sage-combinat-devel] sage-combinat currently breaks sage
Hi! Applying all patches in the sage-combinat queue needing review (and no further) currently breaks sage --- ImportError Traceback (most recent call last) /Applications/sage-5.6/local/lib/python2.7/site-packages/sage/misc/interpreter.pyc in sage_prefilter(self, block, continuation) 403 for i in range(len(B)): 404 L = B[i] -- 405 M = do_prefilter_paste(L, continuation or (not first)) 406 first = False 407 # The L[:len(L)-len(L.lstrip())] business here preserves /Applications/sage-5.6/local/lib/python2.7/site-packages/sage/misc/interpreter.pyc in do_prefilter_paste(line, continuation) 234 235 if len(line) 0: -- 236 line = preparser_ipython.preparse_ipython(line, not continuation) 237 238 return line /Applications/sage-5.6/local/lib/python2.7/site-packages/sage/misc/preparser_ipython.pyc in preparse_ipython(line, reset) 76 # but I don't know how yet... 77 L = L[1:].strip() --- 78 import sage.interfaces.all 79 if L.lower() in sage.interfaces.all.interfaces: 80 switch_interface(L.lower()) /Applications/sage-5.6/local/lib/python2.7/site-packages/sage/interfaces/all.py in module() 2 3 from frobby import frobby 4 from four_ti_2 import four_ti_2 5 from axiom import Axiom, axiom, axiom_console 6 from fricas import FriCAS, fricas, fricas_console /Applications/sage-5.6/local/lib/python2.7/site-packages/sage/interfaces/four_ti_2.py in module() 32 #* 33 --- 34 from sage.rings.integer_ring import ZZ 35 import os 36 /Applications/sage-5.6/devel/sage-combinat/integer.pxd in init sage.rings.integer_ring (sage/rings/integer_ring.c:12180)() 7 8 9 10 11 /Applications/sage-5.6/devel/sage-combinat/integer.pyx in init sage.rings.integer (sage/rings/integer.c:38406)() 169 170 -- 171 172 173 /Applications/sage-5.6/local/lib/python2.7/site-packages/sage/rings/infinity.py in module() 198 #import sage.rings.real_mpfr 199 import sage.rings.integer -- 200 import sage.rings.rational 201 202 from sage.rings.integer_ring import ZZ /Applications/sage-5.6/devel/sage-combinat/fast_arith.pxd in init sage.rings.rational (sage/rings/rational.c:27918)() 3 4 5 6 7 /Applications/sage-5.6/devel/sage-combinat/fast_arith.pyx in init sage.rings.fast_arith (sage/rings/fast_arith.c:8060)() 49 50 --- 51 52 53 ImportError: cannot import name ZZ sage: KeyboardInterrupt Cheers, Anne -- You received this message because you are subscribed to the Google Groups sage-combinat-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-combinat-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-combinat-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-combinat-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
[sage-combinat-devel] Re: sage-combinat currently breaks sage
Hey Anne and Nicolas, I caused this when I rebased #10963. I've fixed it and pushed the changes. Sorry! Travis On Saturday, February 16, 2013 9:54:59 AM UTC-5, Anne Schilling wrote: Hi! Applying all patches in the sage-combinat queue needing review (and no further) currently breaks sage --- ImportError Traceback (most recent call last) /Applications/sage-5.6/local/lib/python2.7/site-packages/sage/misc/interpreter.pyc in sage_prefilter(self, block, continuation) 403 for i in range(len(B)): 404 L = B[i] -- 405 M = do_prefilter_paste(L, continuation or (not first)) 406 first = False 407 # The L[:len(L)-len(L.lstrip())] business here preserves /Applications/sage-5.6/local/lib/python2.7/site-packages/sage/misc/interpreter.pyc in do_prefilter_paste(line, continuation) 234 235 if len(line) 0: -- 236 line = preparser_ipython.preparse_ipython(line, not continuation) 237 238 return line /Applications/sage-5.6/local/lib/python2.7/site-packages/sage/misc/preparser_ipython.pyc in preparse_ipython(line, reset) 76 # but I don't know how yet... 77 L = L[1:].strip() --- 78 import sage.interfaces.all 79 if L.lower() in sage.interfaces.all.interfaces: 80 switch_interface(L.lower()) /Applications/sage-5.6/local/lib/python2.7/site-packages/sage/interfaces/all.py in module() 2 3 from frobby import frobby 4 from four_ti_2 import four_ti_2 5 from axiom import Axiom, axiom, axiom_console 6 from fricas import FriCAS, fricas, fricas_console /Applications/sage-5.6/local/lib/python2.7/site-packages/sage/interfaces/four_ti_2.py in module() 32 #* 33 --- 34 from sage.rings.integer_ring import ZZ 35 import os 36 /Applications/sage-5.6/devel/sage-combinat/integer.pxd in init sage.rings.integer_ring (sage/rings/integer_ring.c:12180)() 7 8 9 10 11 /Applications/sage-5.6/devel/sage-combinat/integer.pyx in init sage.rings.integer (sage/rings/integer.c:38406)() 169 170 -- 171 172 173 /Applications/sage-5.6/local/lib/python2.7/site-packages/sage/rings/infinity.py in module() 198 #import sage.rings.real_mpfr 199 import sage.rings.integer -- 200 import sage.rings.rational 201 202 from sage.rings.integer_ring import ZZ /Applications/sage-5.6/devel/sage-combinat/fast_arith.pxd in init sage.rings.rational (sage/rings/rational.c:27918)() 3 4 5 6 7 /Applications/sage-5.6/devel/sage-combinat/fast_arith.pyx in init sage.rings.fast_arith (sage/rings/fast_arith.c:8060)() 49 50 --- 51 52 53 ImportError: cannot import name ZZ sage: KeyboardInterrupt Cheers, Anne -- You received this message because you are subscribed to the Google Groups sage-combinat-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-combinat-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-combinat-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-combinat-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
[sage-combinat-devel] patches fail to apply
I just tried applying the queue to 5.6 and came across the following problems (both patches apparently have positive reviews). I didn't try to apply the entire queue, so I don't know whether there are any other issues. This workflow doesn't work for me. - applying trac_14065-combinatorial_object_cmp-ts.patch patching file sage/categories/crystals.py Hunk #1 FAILED at 518 1 out of 3 hunks FAILED -- saving rejects to file sage/categories/crystals.py.rej patch failed, unable to continue (try -v) patch failed, rejects left in working dir errors during apply, please fix and refresh trac_14065-combinatorial_object_cmp-ts.patch - applying trac_14130-gyw-bs.patch patching file sage/categories/crystals.py Hunk #1 FAILED at 498 1 out of 1 hunks FAILED -- saving rejects to file sage/categories/crystals.py.rej patching file sage/combinat/crystals/highest_weight_crystals.py Hunk #1 FAILED at 82 1 out of 1 hunks FAILED -- saving rejects to file sage/combinat/crystals/highest_weight_crystals.py.rej patch failed, unable to continue (try -v) patch failed, rejects left in working dir errors during apply, please fix and refresh trac_14130-gyw-bs.patch - -- You received this message because you are subscribed to the Google Groups sage-combinat-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-combinat-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-combinat-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-combinat-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
Re: [sage-combinat-devel] patches fail to apply
Hi Franco, For me everything applies to sage-5.6. Try hg qpop -a hg qselect hg qpush -a I moved the puzzle patch up in the queue, so hopefully this should work for you and gave it the ticket number 14141!!! :-) Cheers, Anne On 2/16/13 7:19 AM, Franco Saliola wrote: I just tried applying the queue to 5.6 and came across the following problems (both patches apparently have positive reviews). I didn't try to apply the entire queue, so I don't know whether there are any other issues. This workflow doesn't work for me. - applying trac_14065-combinatorial_object_cmp-ts.patch patching file sage/categories/crystals.py Hunk #1 FAILED at 518 1 out of 3 hunks FAILED -- saving rejects to file sage/categories/crystals.py.rej patch failed, unable to continue (try -v) patch failed, rejects left in working dir errors during apply, please fix and refresh trac_14065-combinatorial_object_cmp-ts.patch - applying trac_14130-gyw-bs.patch patching file sage/categories/crystals.py Hunk #1 FAILED at 498 1 out of 1 hunks FAILED -- saving rejects to file sage/categories/crystals.py.rej patching file sage/combinat/crystals/highest_weight_crystals.py Hunk #1 FAILED at 82 1 out of 1 hunks FAILED -- saving rejects to file sage/combinat/crystals/highest_weight_crystals.py.rej patch failed, unable to continue (try -v) patch failed, rejects left in working dir errors during apply, please fix and refresh trac_14130-gyw-bs.patch - -- You received this message because you are subscribed to the Google Groups sage-combinat-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-combinat-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-combinat-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-combinat-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out. -- Anne Schilling E-mail: a...@math.ucdavis.edu Professor Web:http://www.math.ucdavis.edu/~anne Department of Mathematics Office: MSB 3222 University of CaliforniaPhone: (530) 554 2326 One Shields Ave Fax:(530) 752 6635 Davis, CA 95616 -- You received this message because you are subscribed to the Google Groups sage-combinat-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-combinat-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-combinat-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-combinat-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
[sage-devel] Shibboleth and Sage ?
Dear Colleagues, I am wondering if a Sage interface to Shibboleth (http://en.wikipedia.org/wiki/Shibboleth_%28Internet2%29) would be inresting / difficult to build. In France, Shibboleth is popular in academic institutions and it would be interesting to allow a Sage server to work with it. The concept seems different from OpenID... Did any body looked at this ? yours t. -- You received this message because you are subscribed to the Google Groups sage-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out. attachment: tdumont.vcf
Re: [sage-devel] sage -t Help
I think it works if you cd to SAGE_ROOT and do the sage -t from there (with the full relative path to the file of course). John On 16 February 2013 04:30, Kannappan Sampath kntri...@gmail.com wrote: Hello everyone, I would be very glad if someone can please help me with this problem. I had wanted to review some doctest-adding patches. So, as a preliminary, if I did sage -t filename, I get mysterious errors. For instance, in sage/rings/, if I do sage -t complex_interval.pyx, (I think this goes through for any .pyx file from my cursory looking into what flows on the screen when I do sage -t * in a directory...), I get that very large file, I am attaching. Questions: 1) Is this one one of the intended uses of the 't' flag: sage -t filename.pyx? You may assume that filename.pyx exists at pwd. 2) If the answer to the above is yes, how do I fix the problem I am facing? Notes about the Sage distro: Sage 5.7.beta4. I have other versions all built from source at the ~/Downloads/ along with this one. Hope someone would help. Thank you. ~KnS -- You received this message because you are subscribed to the Google Groups sage-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out. -- You received this message because you are subscribed to the Google Groups sage-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
Re: [sage-devel] sage -t Help
On 2013-02-16 05:30, Kannappan Sampath wrote: Hello everyone, I would be very glad if someone can please help me with this problem. I had wanted to review some doctest-adding patches. So, as a preliminary, if I did sage -t filename, I get mysterious errors. I think we need more information about exactly what you're trying to do. 1) was this a build from source or a binary build? 2) do you get the same errors with a plain vanilla Sage (without the extra patches)? 3) does the sage executable refer to the version of Sage you're testing? 4) did you remember to run sage -b after applying the patch? -- You received this message because you are subscribed to the Google Groups sage-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
Re: [sage-devel] sage -t Help
On 2013-02-16 11:55, John Cremona wrote: I think it works if you cd to SAGE_ROOT and do the sage -t from there (with the full relative path to the file of course). That shouldn't be the problem, doctests are supposed to work from any directory: jdemeyer@sage:/release/merger/sage-5.8.beta0/devel/sage/sage/rings$ ../../../../sage -t complex_interval.pyx sage -t devel/sage-main/sage/rings/complex_interval.pyx [4.8 s] -- All tests passed! Total time for all tests: 4.9 seconds -- You received this message because you are subscribed to the Google Groups sage-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
[sage-devel] Re: interesting IPython notebooks
On Friday, February 15, 2013 9:49:16 PM UTC-5, jason wrote: Fernando Perez put together this interesting page of IPython notebooks: https://github.com/ipython/ipython/wiki/A-gallery-of-interesting-IPython-Notebooks I thought you guys would have fun looking through some of them. These are really cool - I love http://nbviewer.ipython.org/urls/raw.github.com/carljv/Will_it_Python/master/ARM/ch5/arsenic_wells_switching.ipynb. Would something like this rendering be a way to allow the resumption of published worksheets at sagenb.org, or is the security issue the same with their model? -- You received this message because you are subscribed to the Google Groups sage-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
Re: [sage-devel] sage -t Help
Dear Jeroen and John, Thank you for the replies. OK, thanks for the questions. One of them nails it On Sat, Feb 16, 2013 at 4:53 PM, Jeroen Demeyer jdeme...@cage.ugent.bewrote: On 2013-02-16 05:30, Kannappan Sampath wrote: Hello everyone, I would be very glad if someone can please help me with this problem. I had wanted to review some doctest-adding patches. So, as a preliminary, if I did sage -t filename, I get mysterious errors. I think we need more information about exactly what you're trying to do. 1) was this a build from source or a binary build? 2) do you get the same errors with a plain vanilla Sage (without the extra patches)? 3) does the sage executable refer to the version of Sage you're testing? I think no: the sage --version echoes Sage 5.6 that I got from Ubuntu Repos!! And, I had applied the patches for testing on sage.5.7.beta4. 4) did you remember to run sage -b after applying the patch? Yes. So, could you please tell me how would I run this version of sage? And, I think the reason the tests are failing on the Sage 5.6 is there are some changes that I have not committed. Is this right? Thanks for the hint that the sage test works from any other directory. But, if I did sudo, the sage says, some other users could put files and is not the best place to run sage code from, which makes sense. Hopefully, I have given enough information to help me. Thank you. Kannappan -- You received this message because you are subscribed to the Google Groups sage-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
Re: [sage-devel] sage -t Help
On 2013-02-16 14:36, Kannappan Sampath wrote: So, could you please tell me how would I run this version of sage? It depends on what you want to do. If you *always* want that version of Sage, you could either: - change the file `which sage` to point to the directory you want (for example, by making it a symlink to /path/to/sage-5.7.beta4/sage) - set SAGE_ROOT in your ~/.bashrc (or whatever rc file for your shell) - make an alias sage=/path/to/sage-5.7.beta4/sage in your ~/.bashrc (or whatever rc file for your shell) If you just want to run that version for testing, you could do: $ ../../../../sage -t complex_interval.pyx -- You received this message because you are subscribed to the Google Groups sage-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
[sage-devel] Improper use of UniqueRepresentation
Hi! Currently I try to make hash and comparison of UniqueRepresentation faster. When my attempts broke some tests, I found that UniqueRepresentation is used improperly in some locations. For example, it is used on named groups. sage: G = SymmetricGroup(6) sage: type(G) sage.groups.perm_gps.permgroup_named.SymmetricGroup_with_category sage: isinstance(G, UniqueRepresentation) True sage: G3 = G.subgroup([G((1,2,3,4,5,6)),G((1,2))]) sage: hash(G) 110093248 sage: hash(G3) -2734260432119589081 sage: G == G3 True This is because named groups override the __eq__ method of UniqueRepresentation, but do not override the __hash__ method. So, that's broken. Similar things happen a lot in sage/graphs. UniqueRepresentation is not just about caching of an object by means of the arguments used to create it! In addition, it is about objects that compare equal if and only if they are identical. Hence, overriding __eq__ simply makes no sense for sub-classes of UniqueRepresentation. What shall we do about it? To the very least, UniqueRepresentation should not be used as a base class for named groups. One could still use ClasscallMetaclass and use a weak_cached_function decorator on __classcall__, in order to cache named groups. But in addition, the hash is broken in the example above. Do you have a good suggestion for a hash that is compatible with comparison of these named groups? Similarly for graphs. Best regards, Simon -- You received this message because you are subscribed to the Google Groups sage-devel group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To post to this group, send email to sage-devel@googlegroups.com. Visit this group at http://groups.google.com/group/sage-devel?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
