[sage-devel] Error compiling Sage 4.5.1 in OpenSuse 11.3
Hi, When I compile Sage 4.5.1 in Opensue 11.3, I get the following error. My cpu is an AMD Athlon 1700XP. Machine: Linux hilbert 2.6.34-12-default #1 SMP 2010-06-29 02:39:08 +0200 i686 athlon i386 GNU/Linux Deleting directories from past builds of previous/current versions of sqlite-3.6.22 Extracting package /usr/local/lib/sages/sage-4.5.1/spkg/standard/ sqlite-3.6.22.spkg ... -rw-r--r-- 1 1060 1060 1080534 2010-06-28 17:36 /usr/local/lib/sages/ sage-4.5.1/spkg/standard/sqlite-3.6.22.spkg sqlite-3.6.22/ sqlite-3.6.22/SPKG.txt sqlite-3.6.22/.hg/ sqlite-3.6.22/.hg/00changelog.i sqlite-3.6.22/.hg/requires sqlite-3.6.22/.hg/undo.dirstate sqlite-3.6.22/.hg/store/ sqlite-3.6.22/.hg/store/00changelog.i sqlite-3.6.22/.hg/store/00manifest.i sqlite-3.6.22/.hg/store/data/ sqlite-3.6.22/.hg/store/data/_s_p_k_g.txt.i sqlite-3.6.22/.hg/store/data/spkg-install.i sqlite-3.6.22/.hg/store/data/.hgignore.i sqlite-3.6.22/.hg/store/data/patches/ sqlite-3.6.22/.hg/store/data/patches/_makefile.in.i sqlite-3.6.22/.hg/store/undo sqlite-3.6.22/.hg/attic/ sqlite-3.6.22/.hg/dirstate sqlite-3.6.22/.hg/undo.branch sqlite-3.6.22/src/ sqlite-3.6.22/src/depcomp sqlite-3.6.22/src/sqlite3.pc sqlite-3.6.22/src/aclocal.m4 sqlite-3.6.22/src/README sqlite-3.6.22/src/ltmain.sh sqlite-3.6.22/src/configure sqlite-3.6.22/src/shell.c sqlite-3.6.22/src/configure.ac sqlite-3.6.22/src/config.guess sqlite-3.6.22/src/install-sh sqlite-3.6.22/src/config.sub sqlite-3.6.22/src/missing sqlite-3.6.22/src/sqlite3.1 sqlite-3.6.22/src/sqlite3.c sqlite-3.6.22/src/sqlite3.h sqlite-3.6.22/src/Makefile.am sqlite-3.6.22/src/Makefile.in sqlite-3.6.22/src/sqlite3ext.h sqlite-3.6.22/src/INSTALL sqlite-3.6.22/src/sqlite3.pc.in sqlite-3.6.22/patches/ sqlite-3.6.22/spkg-install sqlite-3.6.22/.hgignore Finished extraction Host system uname -a: Linux hilbert 2.6.34-12-default #1 SMP 2010-06-29 02:39:08 +0200 i686 athlon i386 GNU/Linux CC Version gcc -v Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/i586-suse-linux/4.5/lto-wrapper Target: i586-suse-linux Configured with: ../configure --prefix=/usr --infodir=/usr/share/info --mandir=/usr/share/man --libdir=/usr/lib --libexec dir=/usr/lib --enable-languages=c,c++,objc,fortran,obj-c++,java,ada -- enable-checking=release --with-gxx-include-dir=/usr /include/c++/4.5 --enable-ssp --disable-libssp --disable-plugin --with- bugurl=http://bugs.opensuse.org/ --with-pkgversion ='SUSE Linux' --disable-libgcj --disable-libmudflap --with-slibdir=/ lib --with-system-zlib --enable-__cxa_atexit --enable -libstdcxx-allocator=new --disable-libstdcxx-pch --enable-version- specific-runtime-libs --program-suffix=-4.5 --enable-li nux-futex --without-system-libunwind --enable-gold --with-plugin-ld=/ usr/bin/gold --with-arch-32=i586 --with-tune=generic --build=i586-suse-linux Thread model: posix gcc version 4.5.0 20100604 [gcc-4_5-branch revision 160292] (SUSE Linux) bash: symbol lookup error: bash: undefined symbol: rl_filename_rewrite_hook real0m0.015s user0m0.004s sys 0m0.004s sage: An error occurred while installing sqlite-3.6.22 Please email sage-devel http://groups.google.com/group/sage-devel explaining the problem and send the relevant part of of /usr/local/lib/sages/sage-4.5.1/install.log. Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /usr/local/lib/sages/sage-4.5.1/spkg/build/sqlite-3.6.22 and type 'make check' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/usr/local/lib/sages/sage-4.5.1/spkg/build/sqlite-3.6.22' '/ usr/local/lib/sages/sage-4.5.1/sage' -sh) When you are done debugging, you can type exit to leave the subshell. make[1]: *** [installed/sqlite-3.6.22] Error 1 make[1]: Leaving directory `/usr/local/lib/sages/sage-4.5.1/spkg' real1m51.825s user1m12.881s sys 0m11.925s Error building Sage. mat...@hilbert:/usr/local/lib/sages/sage-4.5.1 Thanks in advance for any assistance ! Shing -- To post to this group, send an email to sage-devel@googlegroups.com To unsubscribe from this group, send an email to sage-devel+unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/sage-devel URL: http://www.sagemath.org
[sage-devel] Re: Problem compiling sage 3.2.1 on opensuse 11.0
The rpm packages gcc43-ob-c++ and gcc-obj-c++ are not installed by default in opensuse 11.0. After I installed them, sage 3.2.1 compiled successfully. Now I can run sage 3.2.1. Thanks for all the replies! Shing On Dec 29, 8:49 pm, Gabriel Dos Reis dosr...@gmail.com wrote: On Mon, Dec 29, 2008 at 11:19 AM, mabshoff mabsh...@googlemail.com wrote: Sigh, when will SUSE learn? They have shipped crap compilers (read: their own patched mess or prerelease snapshots) since way before the days of SuSE 9.0 (half a decade ago IIRC) when their decision to ship pre release compilers finally convinced me after numerous internal compiler errors to switch to another distro after having run SUSE for about 5 years before. Most major linux distros have engaged in this stupid contest of shipping buggy, unreleased versions of GCC, since almost a decade ago, upsetting GCC developers -- it does not make a good reputation for GCC. http://gcc.gnu.org/gcc-2.96.html At the time, a different distro was taking the lead. It was frustrating for both users and developers at the time; it is still so today. Yes, you'd think they would learn. Sickening. (Yes, I've been running SuSE for more than a decade. I was planning to upgrade to 11.0, but I think I'll stay at 10.3 for a while, and then go straight to 11.1) -- Gaby --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group, send email to sage-devel-unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/sage-devel URLs: http://www.sagemath.org -~--~~~~--~~--~--~---
[sage-devel] Re: Problem compiling sage 3.2.1 on opensuse 11.0
I do not know difference between gcc and gcc-obj-c++ packages. Shing On Dec 30, 1:20 pm, mabshoff mabsh...@googlemail.com wrote: On Dec 30, 5:16 am, Shing mat...@yahoo.com wrote: Hi Shing, The rpm packages gcc43-ob-c++ and gcc-obj-c++ are not installed by default in opensuse 11.0. Ok, what do they provide? Given the fact that you build NTL which is C+ + way earlier than matplotlib this is very strange indeed. After I installed them, sage 3.2.1 compiled successfully. Now I can run sage 3.2.1. Thanks for all the replies! Shing Cheers, Michael --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group, send email to sage-devel-unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/sage-devel URLs: http://www.sagemath.org -~--~~~~--~~--~--~---
[sage-devel] Re: Problem compiling sage 3.2.1 on opensuse 11.0
Below is the output from gcc -v. Thanks! Shing mat...@hilbert:~ gcc -v Using built-in specs. Target: i586-suse-linux Configured with: ../configure --prefix=/usr --with-local-prefix=/usr/ local --infodir=/usr/share/info --mandir=/usr/share/man --libdir=/usr/ lib --libexecdir=/usr/lib --enable-languages=c,c++,objc,fortran,obj-c+ +,java,ada --enable-checking=release --with-gxx-include-dir=/usr/ include/c++/4.3 --enable-ssp --disable-libssp --with-bugurl=http:// bugs.opensuse.org/ --with-pkgversion='SUSE Linux' --disable-libgcj -- with-slibdir=/lib --with-system-zlib --enable-__cxa_atexit --enable- libstdcxx-allocator=new --disable-libstdcxx-pch --program-suffix=-4.3 --enable-version-specific-runtime-libs --enable-linux-futex --without- system-libunwind --with-cpu=generic --build=i586-suse-linux Thread model: posix gcc version 4.3.1 20080507 (prerelease) [gcc-4_3-branch revision 135036] (SUSE Linux) mat...@hilbert:~ On Dec 29, 4:47 pm, mabshoff mabsh...@googlemail.com wrote: On Dec 29, 8:43 am, Shing mat...@yahoo.com wrote: Hi, Hi Shing, I got the error below on matplotlib-0.98.3.p3 when I compile (make) sage 3.2.1. I am running OpenSuse 11.0 with a Athlon 1700 CPU. Any assistance is appreciated! Shing SNIP src/_image.cpp:1564: internal compiler error: Segmentation fault Your gcc blew up, please supply the output from gcc -v. There is little we can do about this. Please submit a full bug report, with preprocessed source if appropriate. See http://bugs.opensuse.org/ for instructions. error: command 'gcc' failed with exit status 1 Error building matplotlib package. You might want to check if there is an updated gcc available from OpenSUSE via its upgrade tool. Cheers, Michael --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group, send email to sage-devel-unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/sage-devel URLs: http://www.sagemath.org -~--~~~~--~~--~--~---
[sage-devel] Make on sage 3.0.3 failed on flint-1.06.p3
Hi, When I try to complile sage 3.0.3, I have an error installing flint-1.06.p3. Below is the intallation.log. I am compiling on a PC running opensuse 11 and with a Athlon 1700 CPU. From the log, sage seems to think I have gcc 3.4. Thanks in advance for any assistance! Shing Now cleaning up tmp files. Making SAGE/Python scripts relocatable... Making script relocatable Finished installing extcode-3.0.3.spkg sage-spkg flint-1.06.p3 21 You must set the SAGE_ROOT environment variable or run this script from the SAGE_ROOT or SAGE_ROOT/local/bin/ directory. flint-1.06.p3 Machine: Linux hilbert 2.6.25.5-1.1-pae #1 SMP 2008-06-07 01:55:22 +0200 i686 athlon i386 GNU/Linux Deleting directories from past builds of previous/current versions of flint-1.06.p3 Extracting package /usr/local/lib/sage-3.0.3/spkg/standard/ flint-1.06.p3.spkg ... -rw-r--r-- 1 1003 1003 404737 2008-05-28 09:17 /usr/local/lib/ sage-3.0.3/spkg/standard/flint-1.06.p3.spkg flint-1.06.p3/ flint-1.06.p3/.hgignore flint-1.06.p3/spkg-install flint-1.06.p3/SPKG.txt flint-1.06.p3/spkg-check flint-1.06.p3/dist/ flint-1.06.p3/dist/debian/ flint-1.06.p3/dist/debian/rules flint-1.06.p3/dist/debian/changelog flint-1.06.p3/dist/debian/patches/ flint-1.06.p3/dist/debian/patches/flint-soname.patch flint-1.06.p3/dist/debian/patches/series flint-1.06.p3/dist/debian/control flint-1.06.p3/dist/debian/control.in flint-1.06.p3/dist/debian/compat flint-1.06.p3/dist/debian/libflint-dev.install flint-1.06.p3/dist/debian/copyright flint-1.06.p3/dist/debian/libflint-1.06.install flint-1.06.p3/.hg/ flint-1.06.p3/.hg/requires flint-1.06.p3/.hg/00changelog.i flint-1.06.p3/.hg/branch.cache flint-1.06.p3/.hg/store/ flint-1.06.p3/.hg/store/00changelog.i flint-1.06.p3/.hg/store/data/ flint-1.06.p3/.hg/store/data/spkg-check.i flint-1.06.p3/.hg/store/data/_s_p_k_g.txt.i flint-1.06.p3/.hg/store/data/spkg-install.i flint-1.06.p3/.hg/store/data/.hgignore.i flint-1.06.p3/.hg/store/data/dist/ flint-1.06.p3/.hg/store/data/dist/debian/ flint-1.06.p3/.hg/store/data/dist/debian/libflint0.install.i flint-1.06.p3/.hg/store/data/dist/debian/compat.i flint-1.06.p3/.hg/store/data/dist/debian/control.i flint-1.06.p3/.hg/store/data/dist/debian/libflint-dev.install.i flint-1.06.p3/.hg/store/data/dist/debian/changelog.i flint-1.06.p3/.hg/store/data/dist/debian/rules.i flint-1.06.p3/.hg/store/data/dist/debian/control.in.i flint-1.06.p3/.hg/store/data/dist/debian/copyright.i flint-1.06.p3/.hg/store/data/dist/debian/libflint-1.06.install.i flint-1.06.p3/.hg/store/data/dist/debian/patches/ flint-1.06.p3/.hg/store/data/dist/debian/patches/flint-soname.patch.i flint-1.06.p3/.hg/store/data/dist/debian/patches/series.i flint-1.06.p3/.hg/store/data/patches/ flint-1.06.p3/.hg/store/data/patches/lib__makefile.i flint-1.06.p3/.hg/store/data/patches/makefile.i flint-1.06.p3/.hg/store/data/patches/_d_i_r_n_a_m_e.i flint-1.06.p3/.hg/store/data/patches/flint-soname.patch.i flint-1.06.p3/.hg/store/data/test__gcc__version.pl.i flint-1.06.p3/.hg/store/undo flint-1.06.p3/.hg/store/00manifest.i flint-1.06.p3/.hg/dirstate flint-1.06.p3/.hg/undo.dirstate flint-1.06.p3/test_gcc_version.pl flint-1.06.p3/src/ flint-1.06.p3/src/longlong.h flint-1.06.p3/src/fmpz_poly-test.c flint-1.06.p3/src/fmpz_poly.c flint-1.06.p3/src/pari-profiles/ flint-1.06.p3/src/pari-profiles/pari-profile.p flint-1.06.p3/src/mpz_poly-test.c flint-1.06.p3/src/bernoulli-profile.c flint-1.06.p3/src/fmpz.c flint-1.06.p3/src/zmod_poly-profile.c flint-1.06.p3/src/memory-manager.h flint-1.06.p3/src/test-support.c flint-1.06.p3/src/long_extras.h flint-1.06.p3/src/mpz_poly-tune.c flint-1.06.p3/src/zmod_poly-test.c flint-1.06.p3/src/delta_qexp.c flint-1.06.p3/src/NTL-profile.c flint-1.06.p3/src/memory-manager.c flint-1.06.p3/src/graphing/ flint-1.06.p3/src/graphing/compare2d_config.py flint-1.06.p3/src/graphing/compare2d.py flint-1.06.p3/src/graphing/compare1d.py flint-1.06.p3/src/graphing/compare1d_config.py flint-1.06.p3/src/ZmodF_mul.h flint-1.06.p3/src/bernoulli_fmpz.c flint-1.06.p3/src/mpz_poly-profile.c flint-1.06.p3/src/magma-profiles/ flint-1.06.p3/src/magma-profiles/poly-mult.m flint-1.06.p3/src/magma-profiles/template.m flint-1.06.p3/src/magma-profiles/poly-div.m flint-1.06.p3/src/expmod.c flint-1.06.p3/src/QS/ flint-1.06.p3/src/QS/mp_factor_base.h flint-1.06.p3/src/QS/tinyQS.c flint-1.06.p3/src/QS/block_lanczos.h flint-1.06.p3/src/QS/factor_base.c flint-1.06.p3/src/QS/sieve.h flint-1.06.p3/src/QS/mp_lprels.c flint-1.06.p3/src/QS/poly.c flint-1.06.p3/src/QS/mpQS.h flint-1.06.p3/src/QS/factor_base.h flint-1.06.p3/src/QS/mp_poly.h flint-1.06.p3/src/QS/mp_factor_base.c flint-1.06.p3/src/QS/mp_lprels.h flint-1.06.p3/src/QS/mp_linear_algebra.c flint-1.06.p3/src/QS/poly.h flint-1.06.p3/src/QS/mp_sieve.h flint-1.06.p3/src/QS/mp_linear_algebra.h flint-1.06.p3/src/QS/mpQS.c flint-1.06.p3/src/QS/common.h flint-1.06.p3/src/QS/tinyQS.h flint-1.06.p3/src/QS/sieve.c flint-1.06.p3/src/QS/linear_algebra.h flint-1.06.p3/src/QS/linear_algebra.c flint-1.06.p3
[sage-devel] Re: Make on sage 3.0.3 failed on flint-1.06.p3
My PC is running Opensuse 11 with gcc 4.3.1. Shing Home page : http://www.lombok.demon.co.uk/ --- On Sun, 6/7/08, David Harvey [EMAIL PROTECTED] wrote: From: David Harvey [EMAIL PROTECTED] Subject: [sage-devel] Re: Make on sage 3.0.3 failed on flint-1.06.p3 To: sage-devel@googlegroups.com Date: Sunday, 6 July, 2008, 2:24 AM On Jul 5, 2008, at 2:03 PM, William Stein wrote: On Sat, Jul 5, 2008 at 7:38 AM, Shing [EMAIL PROTECTED] wrote: Hi, When I try to complile sage 3.0.3, I have an error installing flint-1.06.p3. Below is the intallation.log. I am compiling on a PC running opensuse 11 and with a Athlon 1700 CPU. From the log, sage seems to think I have gcc 3.4. It says in the log: WARNING: gcc version less than 3.4.0 GCC version less than 3.4.0 Flint will not be able to compile successfully You need to install a gcc version 3.4.0. But it also says in the log gcc version 4.3.1 20080507 (prerelease) [gcc-4_3-branch revision 135036] (SUSE Linux) So the version detection logic must be incorrect. david __ Not happy with your email address?. Get the one you really want - millions of new email addresses available now at Yahoo! http://uk.docs.yahoo.com/ymail/new.html --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group, send email to [EMAIL PROTECTED] For more options, visit this group at http://groups.google.com/group/sage-devel URLs: http://www.sagemath.org -~--~~~~--~~--~--~---
[sage-devel] Re: Make on sage 3.0.3 failed on flint-1.06.p3
Thanks! Shing --- On Sun, 6/7/08, mabshoff [EMAIL PROTECTED] wrote: From: mabshoff [EMAIL PROTECTED] Subject: [sage-devel] Re: Make on sage 3.0.3 failed on flint-1.06.p3 To: sage-devel sage-devel@googlegroups.com Date: Sunday, 6 July, 2008, 4:35 AM On Jul 5, 11:56 am, Shing Hing Man [EMAIL PROTECTED] wrote: My PC is running Opensuse 11 with gcc 4.3.1. Shing Hi Shing, it is a know problem (see http://trac.sagemath.org/sage_trac/ticket/3528) and will be fixed in Sage 3.0.4. The issue is that gcc -dumpversion on OpenSuSE 11 reports gcc 4.3 which confuses our detection script. OpenSuSE 11 ships some gcc 4.3.1CVS release, so that might explain the odd dumpversion string. Cheers, Michael __ Not happy with your email address?. Get the one you really want - millions of new email addresses available now at Yahoo! http://uk.docs.yahoo.com/ymail/new.html --~--~-~--~~~---~--~~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group, send email to [EMAIL PROTECTED] For more options, visit this group at http://groups.google.com/group/sage-devel URLs: http://www.sagemath.org -~--~~~~--~~--~--~---
