[sage-devel] How to find the merge conflict detected by patchbot

[jhonrubia6]

Hi,
recently pushed ticket https://trac.sagemath.org/ticket/23427 and the 
patchbot fails and the log shows the following lines
Auto-merging src/sage/geometry/hyperbolic_space/hyperbolic_geodesic.py 
CONFLICT (content): Merge conflict in 
src/sage/geometry/hyperbolic_space/hyperbolic_geodesic.py

How do I find the conflict it is detecting? in my machine I didn't get any 
conflict during merging with current develop version before pushing the 
branch.

Javier

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Re: [sage-devel] Re: Error rebuilding Sage (ncurses)

[jhonrubia6]

Finally I've found the error but I do not know how to unravel it so any 
help will be welcome
I am working on ticket #22081, and in some commit (ea92d27) I made the 
error of adding src/bin/sage-env-config file to the commit pushed. After 
that I did some corrections on code (4851eed->bc476cd->9d94d5c) then I got 
an error on trac as it was unable to merge (I didn't know yet my error on 
the previous commit) so I did some merge commits 
(aee6930->7199b81->787cf58).
Now what I would like to do is apply bc476cd and then 9d94d5c to the head 
and nothing more, discarding the other commits. I do not know if it is even 
possible. If not, how do I discard the src/bin/sage-env-config file (which 
my settings) that is probably stopping trac to merge?

thanks in advance

El domingo, 16 de julio de 2017, 20:50:03 (UTC+2), jhonrubia6 escribió:
>
>
>
> El jueves, 6 de julio de 2017, 20:52:02 (UTC+2), François Bissey escribió:
>>
>> The OS X file system only fake case sensitivity, so “Sage” and “sage” 
>> are actually the same folder. 
>>
>> Now it is very suspicious. It fails because permission is denied on 
>> > /Users/J_Honrubia/Sage/sage/local/var/lib/sage/installed 
>> Yet you are t143730 and you are building from /Users/t143730/sage/ 
>> so do you have symlinks to another user account for which you 
>> don’t have permission with this user? 
>> the symlink could be 
>> local 
>> local/var 
>> local/var/lib 
>> local/var/lib/sage 
>> local/var/lib/sage/installed 
>>
>
>
> No François, there is no J_Honrubia user on this machine and neither is a 
> symlink on this subdirectories you suggested. Is there a target in the 
> makefile to clean this mess :-)
>  
>
>>
>> François 
>>
>> > On 7/07/2017, at 05:35, jhonrubia6 <javier_...@hotmail.com> wrote: 
>> > 
>> > this is the complete log, somehow it is trying to create a S 
>> > /Library/Developer/CommandLineTools/usr/bin/make build/make/Makefile 
>> > 
>> > make[1]: `build/make/Makefile' is up to date. 
>> > 
>> > build/bin/sage-logger \ 
>> > 
>> > "cd build/make && ./install 'all'" logs/install.log 
>> > 
>> > *** ALL ENVIRONMENT VARIABLES BEFORE BUILD: *** 
>> > 
>> > 
>> Apple_PubSub_Socket_Render=/private/tmp/com.apple.launchd.wvo7zYEsAE/Render 
>> > 
>> > HOME=/Users/t143730 
>> > 
>> > LANG=es_ES.UTF-8 
>> > 
>> > LOGNAME=t143730 
>> > 
>> > MAKE=make 
>> > 
>> > MAKEFLAGS= V=1 
>> > 
>> > MAKELEVEL=1 
>> > 
>> > MFLAGS= 
>> > 
>> > 
>> PATH=/Users/t143730/sage/build/bin:/Users/t143730/sage/src/bin:/Users/t143730/sage/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/Library/TeX/texbin
>>  
>>
>> > 
>> > PWD=/Users/t143730/sage/build/make 
>> > 
>> > PYTHONPATH=/Users/t143730/sage/local 
>> > 
>> > SAGE_EXTCODE=/Users/t143730/sage/local/share/sage/ext 
>> > 
>> > SAGE_LOCAL=/Users/t143730/sage/local 
>> > 
>> > SAGE_LOGS=/Users/t143730/sage/logs/pkgs 
>> > 
>> > 
>> SAGE_ORIG_PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/Library/TeX/texbin
>>  
>>
>> > 
>> > SAGE_ORIG_PATH_SET=True 
>> > 
>> > SAGE_ROOT=/Users/t143730/sage 
>> > 
>> > SAGE_SHARE=/Users/t143730/sage/local/share 
>> > 
>> > SAGE_SPKG_INST=/Users/t143730/sage/local/var/lib/sage/installed 
>> > 
>> > SAGE_SRC=/Users/t143730/sage/src 
>> > 
>> > SAGE_VERSION=8.0.beta4 
>> > 
>> > SECURITYSESSIONID=186a7 
>> > 
>> > SHELL=/bin/bash 
>> > 
>> > SHLVL=4 
>> > 
>> > SSH_AUTH_SOCK=/private/tmp/com.apple.launchd.aggQsC0Rbq/Listeners 
>> > 
>> > TERM=xterm-256color 
>> > 
>> > TERM_PROGRAM=Apple_Terminal 
>> > 
>> > TERM_PROGRAM_VERSION=361.1 
>> > 
>> > TERM_SESSION_ID=BA2F8976-A25B-4038-8F51-F0CCF658AD18 
>> > 
>> > TMPDIR=/var/folders/jz/2g9tqjks4yz7b24v_z7qnjscgn/T/ 
>> > 
>> > USER=t143730 
>> > 
>> > XPC_FLAGS=0x0 
>> > 
>> > XPC_SERVICE_NAME=0 
>> > 
>> > _=/usr/bin/env 
>> > 
>> > __CF_USER_TEXT_ENCODING=0x1F5:0x0:0x8 
>> > 
>> > *** 
>> > 
>> > make base 
>> > 
>> > make[2]: Nothing to be done for `base'. 

Re: [sage-devel] Re: Error rebuilding Sage (ncurses)

[jhonrubia6]

El jueves, 6 de julio de 2017, 20:52:02 (UTC+2), François Bissey escribió:
>
> The OS X file system only fake case sensitivity, so “Sage” and “sage” 
> are actually the same folder. 
>
> Now it is very suspicious. It fails because permission is denied on 
> > /Users/J_Honrubia/Sage/sage/local/var/lib/sage/installed 
> Yet you are t143730 and you are building from /Users/t143730/sage/ 
> so do you have symlinks to another user account for which you 
> don’t have permission with this user? 
> the symlink could be 
> local 
> local/var 
> local/var/lib 
> local/var/lib/sage 
> local/var/lib/sage/installed 
>


No François, there is no J_Honrubia user on this machine and neither is a 
symlink on this subdirectories you suggested. Is there a target in the 
makefile to clean this mess :-)
 

>
> François 
>
> > On 7/07/2017, at 05:35, jhonrubia6 <javier_...@hotmail.com > 
> wrote: 
> > 
> > this is the complete log, somehow it is trying to create a S 
> > /Library/Developer/CommandLineTools/usr/bin/make build/make/Makefile 
> > 
> > make[1]: `build/make/Makefile' is up to date. 
> > 
> > build/bin/sage-logger \ 
> > 
> > "cd build/make && ./install 'all'" logs/install.log 
> > 
> > *** ALL ENVIRONMENT VARIABLES BEFORE BUILD: *** 
> > 
> > 
> Apple_PubSub_Socket_Render=/private/tmp/com.apple.launchd.wvo7zYEsAE/Render 
> > 
> > HOME=/Users/t143730 
> > 
> > LANG=es_ES.UTF-8 
> > 
> > LOGNAME=t143730 
> > 
> > MAKE=make 
> > 
> > MAKEFLAGS= V=1 
> > 
> > MAKELEVEL=1 
> > 
> > MFLAGS= 
> > 
> > 
> PATH=/Users/t143730/sage/build/bin:/Users/t143730/sage/src/bin:/Users/t143730/sage/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/Library/TeX/texbin
>  
>
> > 
> > PWD=/Users/t143730/sage/build/make 
> > 
> > PYTHONPATH=/Users/t143730/sage/local 
> > 
> > SAGE_EXTCODE=/Users/t143730/sage/local/share/sage/ext 
> > 
> > SAGE_LOCAL=/Users/t143730/sage/local 
> > 
> > SAGE_LOGS=/Users/t143730/sage/logs/pkgs 
> > 
> > 
> SAGE_ORIG_PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/Library/TeX/texbin
>  
>
> > 
> > SAGE_ORIG_PATH_SET=True 
> > 
> > SAGE_ROOT=/Users/t143730/sage 
> > 
> > SAGE_SHARE=/Users/t143730/sage/local/share 
> > 
> > SAGE_SPKG_INST=/Users/t143730/sage/local/var/lib/sage/installed 
> > 
> > SAGE_SRC=/Users/t143730/sage/src 
> > 
> > SAGE_VERSION=8.0.beta4 
> > 
> > SECURITYSESSIONID=186a7 
> > 
> > SHELL=/bin/bash 
> > 
> > SHLVL=4 
> > 
> > SSH_AUTH_SOCK=/private/tmp/com.apple.launchd.aggQsC0Rbq/Listeners 
> > 
> > TERM=xterm-256color 
> > 
> > TERM_PROGRAM=Apple_Terminal 
> > 
> > TERM_PROGRAM_VERSION=361.1 
> > 
> > TERM_SESSION_ID=BA2F8976-A25B-4038-8F51-F0CCF658AD18 
> > 
> > TMPDIR=/var/folders/jz/2g9tqjks4yz7b24v_z7qnjscgn/T/ 
> > 
> > USER=t143730 
> > 
> > XPC_FLAGS=0x0 
> > 
> > XPC_SERVICE_NAME=0 
> > 
> > _=/usr/bin/env 
> > 
> > __CF_USER_TEXT_ENCODING=0x1F5:0x0:0x8 
> > 
> > *** 
> > 
> > make base 
> > 
> > make[2]: Nothing to be done for `base'. 
> > 
> > env SAGE_BUILD_TOOLCHAIN=yes make toolchain 
> > 
> > make[2]: Nothing to be done for `toolchain'. 
> > 
> > make toolchain-deps 
> > 
> > make /Users/t143730/sage/local/var/lib/sage/installed/zlib-1.2.8.p0 
> > 
> > make[3]: 
> `/Users/t143730/sage/local/var/lib/sage/installed/zlib-1.2.8.p0' is up to 
> date. 
> > 
> > make /Users/t143730/sage/local/var/lib/sage/installed/mpir-2.7.2.p0 
> > 
> > make[3]: 
> `/Users/t143730/sage/local/var/lib/sage/installed/mpir-2.7.2.p0' is up to 
> date. 
> > 
> > make /Users/t143730/sage/local/var/lib/sage/installed/mpfr-3.1.5 
> > 
> > make[3]: `/Users/t143730/sage/local/var/lib/sage/installed/mpfr-3.1.5' 
> is up to date. 
> > 
> > make /Users/t143730/sage/local/var/lib/sage/installed/mpc-1.0.3.p0 
> > 
> > make[3]: `/Users/t143730/sage/local/var/lib/sage/installed/mpc-1.0.3.p0' 
> is up to date. 
> > 
> > make doc all-sage 
> > 
> > sage-logger -p 'sage-spkg ncurses-6.0' 
> '/Users/t143730/sage/logs/pkgs/ncurses-6.0.log' 
> > 
> > [ncurses-6.0] mkdir: 
> /Users/J_Honrubia/Sage/sage/local/var/lib/sage/installed: Permission denied 
> > 
> > [ncurses-6.0] 
> *

[sage-devel] Re: Error rebuilding Sage (ncurses)

[jhonrubia6]

this is the complete log, somehow it is trying to create a S

/Library/Developer/CommandLineTools/usr/bin/make build/make/Makefile

make[1]: `build/make/Makefile' is up to date.

build/bin/sage-logger \

"cd build/make && ./install 'all'" logs/install.log

*** ALL ENVIRONMENT VARIABLES BEFORE BUILD: ***

Apple_PubSub_Socket_Render=/private/tmp/com.apple.launchd.wvo7zYEsAE/Render

HOME=/Users/t143730

LANG=es_ES.UTF-8

LOGNAME=t143730

MAKE=make

MAKEFLAGS= V=1

MAKELEVEL=1

MFLAGS=

PATH=/Users/t143730/sage/build/bin:/Users/t143730/sage/src/bin:/Users/t143730/sage/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/Library/TeX/texbin

PWD=/Users/t143730/sage/build/make

PYTHONPATH=/Users/t143730/sage/local

SAGE_EXTCODE=/Users/t143730/sage/local/share/sage/ext

SAGE_LOCAL=/Users/t143730/sage/local

SAGE_LOGS=/Users/t143730/sage/logs/pkgs

SAGE_ORIG_PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/Library/TeX/texbin

SAGE_ORIG_PATH_SET=True

SAGE_ROOT=/Users/t143730/sage

SAGE_SHARE=/Users/t143730/sage/local/share

SAGE_SPKG_INST=/Users/t143730/sage/local/var/lib/sage/installed

SAGE_SRC=/Users/t143730/sage/src

SAGE_VERSION=8.0.beta4

SECURITYSESSIONID=186a7

SHELL=/bin/bash

SHLVL=4

SSH_AUTH_SOCK=/private/tmp/com.apple.launchd.aggQsC0Rbq/Listeners

TERM=xterm-256color

TERM_PROGRAM=Apple_Terminal

TERM_PROGRAM_VERSION=361.1

TERM_SESSION_ID=BA2F8976-A25B-4038-8F51-F0CCF658AD18

TMPDIR=/var/folders/jz/2g9tqjks4yz7b24v_z7qnjscgn/T/

USER=t143730

XPC_FLAGS=0x0

XPC_SERVICE_NAME=0

_=/usr/bin/env

__CF_USER_TEXT_ENCODING=0x1F5:0x0:0x8

***

make base

make[2]: Nothing to be done for `base'.

env SAGE_BUILD_TOOLCHAIN=yes make toolchain

make[2]: Nothing to be done for `toolchain'.

make toolchain-deps

make /Users/t143730/sage/local/var/lib/sage/installed/zlib-1.2.8.p0

make[3]: `/Users/t143730/sage/local/var/lib/sage/installed/zlib-1.2.8.p0' 
is up to date.

make /Users/t143730/sage/local/var/lib/sage/installed/mpir-2.7.2.p0

make[3]: `/Users/t143730/sage/local/var/lib/sage/installed/mpir-2.7.2.p0' 
is up to date.

make /Users/t143730/sage/local/var/lib/sage/installed/mpfr-3.1.5

make[3]: `/Users/t143730/sage/local/var/lib/sage/installed/mpfr-3.1.5' is 
up to date.

make /Users/t143730/sage/local/var/lib/sage/installed/mpc-1.0.3.p0

make[3]: `/Users/t143730/sage/local/var/lib/sage/installed/mpc-1.0.3.p0' is 
up to date.

make doc all-sage

sage-logger -p 'sage-spkg ncurses-6.0' 
'/Users/t143730/sage/logs/pkgs/ncurses-6.0.log'

[ncurses-6.0] mkdir: 
/Users/J_Honrubia/Sage/sage/local/var/lib/sage/installed: Permission denied

[ncurses-6.0] 


[ncurses-6.0] Error creating directory 
/Users/J_Honrubia/Sage/sage/local/var/lib/sage/installed

[ncurses-6.0] 


[ncurses-6.0] Please email sage-devel 
(http://groups.google.com/group/sage-devel)

[ncurses-6.0] explaining the problem and including the log file

[ncurses-6.0]   /Users/t143730/sage/logs/pkgs/.log

[ncurses-6.0] Describe your computer, operating system, etc.

[ncurses-6.0] 


make[2]: *** [/Users/t143730/sage/local/var/lib/sage/installed/ncurses-6.0] 
Error 1

make[1]: *** [all] Error 2


real 0m0.376s

user 0m0.234s

sys 0m0.113s

***

Error building Sage.


The following package(s) may have failed to build (not necessarily

during this run of 'make all'):


* package: ncurses-6.0

  log file: /Users/t143730/sage/logs/pkgs/ncurses-6.0.log

  build directory: /Users/t143730/sage/local/var/tmp/sage/build/ncurses-6.0


The build directory may contain configuration files and other potentially

helpful information. WARNING: if you now run 'make' again, the build

directory will, by default, be deleted. Set the environment variable

SAGE_KEEP_BUILT_SPKGS to 'yes' to prevent this.


make: *** [all] Error 1

And under /Users/t143730 there is no subdirectory named sage

iMac-de-Javier:Sage t143730$ pwd

/Users/t143730/Sage

iMac-de-Javier:Sage t143730$ ls -l

total 888

-rw-r--r--1 t143730  staff   70187  9 ene 15:36 COPYING.txt

-rw-r--r--1 t143730  staff4593  4 jul 21:31 Makefile

-rw-r--r--1 t143730  staff   15204  4 jul 21:31 README.md

-rw-r--r--1 t143730  staff  53  4 jul 21:31 VERSION.txt

-rwxr-xr-x1 t143730  staff4022  4 jul 21:31 bootstrap

drwxr-xr-x   11 t143730  staff 374  9 ene 15:36 build

drwxr-xr-x7 t143730  staff 238  4 jul 21:52 config

lrwxr-xr-x1 t143730  staff  20  6 jul 19:31 config.log -> 
logs/pkgs/config.log

-rwxr-xr-x1 t143730  staff   31562  6 jul 19:31 config.status

-rwxr-xr-x1 t143730  staff  263914  4 jul 21:52 configure

-rw-r--r--1 t143730  staff   36049  4 jul 21:31 configure.ac

drwxr-xr-x   16 t143730  staff 544 18 abr  2016 

[sage-devel] Error rebuilding Sage (ncurses)

[jhonrubia6]

Hi,
after a git merge develop (SAGE_VERSION=8.0.beta4), I tried to rebuild with 
make and I get the following error

sage-logger -p 'sage-spkg ncurses-6.0' 
'/Users/t143730/sage/logs/pkgs/ncurses-6.0.log'

[ncurses-6.0] mkdir: 
/Users/J_Honrubia/Sage/sage/local/var/lib/sage/installed: Permission denied

[ncurses-6.0] 


[ncurses-6.0] Error creating directory 
/Users/J_Honrubia/Sage/sage/local/var/lib/sage/installed

[ncurses-6.0] 


[ncurses-6.0] Please email sage-devel 
(http://groups.google.com/group/sage-devel)

[ncurses-6.0] explaining the problem and including the log file

[ncurses-6.0]   /Users/t143730/sage/logs/pkgs/.log

[ncurses-6.0] Describe your computer, operating system, etc.

[ncurses-6.0] 


make[2]: *** [/Users/t143730/sage/local/var/lib/sage/installed/ncurses-6.0] 
Error 1

make[1]: *** [all] Error 2


real 0m1.036s

user 0m0.252s

sys 0m0.129s

***

Error building Sage.


The following package(s) may have failed to build (not necessarily 

during this run of 'make all'):


* package: ncurses-6.0

  log file: /Users/t143730/sage/logs/pkgs/ncurses-6.0.log

  build directory: /Users/t143730/sage/local/var/tmp/sage/build/ncurses-6.0



OS X version 10.11.6
Imac (IntelCore2Duo)
Any ideas?
regards

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[sage-devel] Re: Rant about plotting documentation

[jhonrubia6]

First attempt committed, see if you need other improvements

El miércoles, 5 de abril de 2017, 15:03:35 (UTC+2), kcrisman escribió:
>
>
>
> On Tuesday, April 4, 2017 at 7:10:02 AM UTC-4, jhonrubia6 wrote:
>>
>> Maybe the model should be its *cousin *the plot2d page?
>> http://doc.sagemath.org/html/en/reference/plotting/sage/plot/plot.html
>>
>>>
>>>>
> That would be extremely helpful. 
>

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[sage-devel] Re: Rant about plotting documentation

[jhonrubia6]

Maybe the model should be its *cousin *the plot2d page?
http://doc.sagemath.org/html/en/reference/plotting/sage/plot/plot.html

El martes, 4 de abril de 2017, 12:25:37 (UTC+2), jhonrubia6 escribió:
>
> I'll take on this ticket (I didn't realize the plot3d/examples file when I 
> reviewed this documentation)
> What do you expect of those opening words? a hyperlinked list of objects 
> included in the file would be the entry level I guess.
> Or maybe, are you looking for a major 3d documentation rebuild?
>
>
> El domingo, 19 de marzo de 2017, 19:41:48 (UTC+1), Andrey Novoseltsev 
> escribió:
>>
>> I wanted to check how to make new threejs plotting code to use CDN. show? 
>> and plot? don't mention viewer options and their parameters. So, I go to 
>> the reference manual
>> http://doc.sagemath.org/html/en/reference/
>> and close to the top I see 3D Graphics
>> http://doc.sagemath.org/html/en/reference/plot3d/index.html
>> which starts with introduction
>>
>> http://doc.sagemath.org/html/en/reference/plot3d/sage/plot/plot3d/examples.html
>> consisting of a single contrived example without any explanations!!! (Or 
>> output for that matter.)
>>
>> Next there are "Plotting functions"
>>
>> http://doc.sagemath.org/html/en/reference/plot3d/sage/plot/plot3d/plot3d.html
>> which look pretty at first glance because of colorful plots, but then I 
>> notice that there are also no opening words!
>>
>> Since I know very well what I am looking for, I now click on "Three.js 
>> JavaScript WebGL Renderer" (and realize that I want a newer version from 
>> develop ;-), but how can a new user find out about different output options 
>> and their parameters???
>>
>> Very much hope that someone will care enough to improve the situation...
>>
>

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[sage-devel] Re: Rant about plotting documentation

[jhonrubia6]

I'll take on this ticket (I didn't realize the plot3d/examples file when I 
reviewed this documentation)
What do you expect of those opening words? a hyperlinked list of objects 
included in the file would be the entry level I guess.
Or maybe, are you looking for a major 3d documentation rebuild?


El domingo, 19 de marzo de 2017, 19:41:48 (UTC+1), Andrey Novoseltsev 
escribió:
>
> I wanted to check how to make new threejs plotting code to use CDN. show? 
> and plot? don't mention viewer options and their parameters. So, I go to 
> the reference manual
> http://doc.sagemath.org/html/en/reference/
> and close to the top I see 3D Graphics
> http://doc.sagemath.org/html/en/reference/plot3d/index.html
> which starts with introduction
>
> http://doc.sagemath.org/html/en/reference/plot3d/sage/plot/plot3d/examples.html
> consisting of a single contrived example without any explanations!!! (Or 
> output for that matter.)
>
> Next there are "Plotting functions"
>
> http://doc.sagemath.org/html/en/reference/plot3d/sage/plot/plot3d/plot3d.html
> which look pretty at first glance because of colorful plots, but then I 
> notice that there are also no opening words!
>
> Since I know very well what I am looking for, I now click on "Three.js 
> JavaScript WebGL Renderer" (and realize that I want a newer version from 
> develop ;-), but how can a new user find out about different output options 
> and their parameters???
>
> Very much hope that someone will care enough to improve the situation...
>

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Re: [sage-devel] Trac error on push

[jhonrubia6]

Thank you. Is there any place where is documented how to get the new ssh 
key for the host whenever this happens again?

El lunes, 31 de octubre de 2016, 8:54:29 (UTC+1), François escribió:
>
> Add 
> trac.sagemath.org,104.197.143.230 ecdsa-sha2-nistp256 
> E2VjZHNhLXNoYTItbmlzdHAyNTYIbmlzdHAyNTYAAABBBG+/AO490umZWuczUgClP4BgFm5XR9I43z4kf9f+pu8Uj6UvH/7Pz1oBkJ71xET+xTmecBHB2c9OwlgPjB70AB8=
>  
>
> as a single line at the end of .ssh/know_hosts 
>
> François 
>
> > On 31/10/2016, at 20:52, Marco Cognetta <cognett...@gmail.com 
> > wrote: 
> > 
> > There is no longer a line with trac.sagemath.org but when I try to 
> connect I do not get the option of adding it to the list of known_hosts. I 
> had this problem a few weeks ago and was able to fix it but I have 
> forgotten how... 
> > 
> > Thanks for your help thus far! 
> > 
> > On Monday, October 31, 2016 at 4:36:35 PM UTC+9, François wrote: 
> > Then, it may have been the wrong host. 
> > You should remove the line starting with 
> > trac.sagemath.org 
> > Once removed, the next time you connect to the trac 
> > server, you will be asked about adding it to the list of 
> > know_hosts. 
> > 
> > François 
> > 
> > > On 31/10/2016, at 20:27, Marco Cognetta <cognett...@gmail.com> wrote: 
> > > 
> > > I have done that but I still get the same error. How do I get the 
> correct information to put in known_hosts? 
> > > 
> > > On Monday, October 31, 2016 at 4:14:23 PM UTC+9, François wrote: 
> > > Removing the 4th line in your file 
> > > ~/.ssh/known_hosts 
> > > looks like it would do the trick. 
> > > I think it would be the 4th line but it could be 
> > > another one. It will almost certainly be another one 
> > > for other people. 
> > > 
> > > François 
> > > 
> > > > On 31/10/2016, at 20:10, Marco Cognetta <cognett...@gmail.com> 
> wrote: 
> > > > 
> > > > What is the fix for this? I have tried getting the updated trac and 
> testing my rsa keys. 
> > > > 
> > > > On Saturday, October 29, 2016 at 2:33:05 AM UTC+9, Dima Pasechnik 
> wrote: 
> > > > 
> > > > 
> > > > On Friday, October 28, 2016 at 5:01:54 PM UTC, jhonrubia6 wrote: 
> > > > Is not 104.197.143.230? 
> > > > 
> > > > 
> > > > 
> > > > OnoSendaiII:sage J_Honrubia$ host trac.sagemath.org 
> > > > 
> > > > trac.sagemath.org has address 104.197.143.230 
> > > > 
> > > > 
> > > > the IP might have remained, but the (virtual) machine got changed, 
> and got SSH keys regenerated. 
> > > >   
> > > > 
> > > > 
> > > > 
> > > > El jueves, 27 de octubre de 2016, 20:29:30 (UTC+2), John Cremona 
> escribió: 
> > > > The machine hosting trac did change recently. 
> > > > 
> > > > On 27 October 2016 at 19:17, jhonrubia6 <javier_...@hotmail.com> 
> wrote: 
> > > > > After working on ticket #21052, I committed the changed file and 
> tried to 
> > > > > git trac push and get the error 
> > > > > 
> > > > > git_trac.git_error.GitError: git returned with non-zero exit code 
> (128) when 
> > > > > executing "git push trac 
> > > > > HEAD:refs/heads/u/jhonrubia6/add_pictures_to_implicit_plot3d_py" 
> > > > > 
> > > > > STDERR: 
> @@@ 
> > > > > 
> > > > > STDERR: @WARNING: REMOTE HOST IDENTIFICATION HAS CHANGED! 
> @ 
> > > > > 
> > > > > STDERR: 
> @@@ 
> > > > > 
> > > > > STDERR: IT IS POSSIBLE THAT SOMEONE IS DOING SOMETHING NASTY! 
> > > > > 
> > > > > STDERR: Someone could be eavesdropping on you right now 
> > > > > (man-in-the-middle attack)! 
> > > > > 
> > > > > STDERR: It is also possible that a host key has just been 
> changed. 
> > > > > 
> > > > > STDERR: The fingerprint for the ECDSA key sent by the remote 
> host is 
> > > > > 
> > > > > STDERR: SHA256:4Op/q3b5792x+F1lHSKRi5UIORAPDlIFVA5cUq9YVXI. 
> > > > > 
> > > > > STDERR: Please contact your system administrator. 
> &g

Re: [sage-devel] Trac error on push

[jhonrubia6]

Is not 104.197.143.230?


OnoSendaiII:sage J_Honrubia$ host trac.sagemath.org 

trac.sagemath.org has address 104.197.143.230



El jueves, 27 de octubre de 2016, 20:29:30 (UTC+2), John Cremona escribió:
>
> The machine hosting trac did change recently. 
>
> On 27 October 2016 at 19:17, jhonrubia6 <javier_...@hotmail.com 
> > wrote: 
> > After working on ticket #21052, I committed the changed file and tried 
> to 
> > git trac push and get the error 
> > 
> > git_trac.git_error.GitError: git returned with non-zero exit code (128) 
> when 
> > executing "git push trac 
> > HEAD:refs/heads/u/jhonrubia6/add_pictures_to_implicit_plot3d_py" 
> > 
> > STDERR: @@@ 
> > 
> > STDERR: @WARNING: REMOTE HOST IDENTIFICATION HAS CHANGED! @ 
> > 
> > STDERR: @@@ 
> > 
> > STDERR: IT IS POSSIBLE THAT SOMEONE IS DOING SOMETHING NASTY! 
> > 
> > STDERR: Someone could be eavesdropping on you right now 
> > (man-in-the-middle attack)! 
> > 
> > STDERR: It is also possible that a host key has just been changed. 
> > 
> > STDERR: The fingerprint for the ECDSA key sent by the remote host is 
> > 
> > STDERR: SHA256:4Op/q3b5792x+F1lHSKRi5UIORAPDlIFVA5cUq9YVXI. 
> > 
> > STDERR: Please contact your system administrator. 
> > 
> > STDERR: Add correct host key in /Users/J_Honrubia/.ssh/known_hosts 
> to 
> > get rid of this message. 
> > 
> > STDERR: Offending ECDSA key in /Users/J_Honrubia/.ssh/known_hosts:4 
> > 
> > STDERR: ECDSA host key for trac.sagemath.org has changed and you 
> have 
> > requested strict checking. 
> > 
> > STDERR: Host key verification failed. 
> > 
> > STDERR: fatal: Could not read from remote repository. 
> > 
> > STDERR: 
> > 
> > STDERR: Please make sure you have the correct access rights 
> > 
> > STDERR: and the repository exists. 
> > 
> > 
> > git trac config works fine without errors. 
> > 
> > but 
> > 
> > OnoSendaiII:sage J_Honrubia$ ssh g...@trac.sagemath.org  
> info 
> > 
> > @@@ 
> > 
> > @WARNING: REMOTE HOST IDENTIFICATION HAS CHANGED! @ 
> > 
> > @@@ 
> > 
> > IT IS POSSIBLE THAT SOMEONE IS DOING SOMETHING NASTY! 
> > 
> > Someone could be eavesdropping on you right now (man-in-the-middle 
> attack)! 
> > 
> > It is also possible that a host key has just been changed. 
> > 
> > The fingerprint for the ECDSA key sent by the remote host is 
> > 
> > SHA256:4Op/q3b5792x+F1lHSKRi5UIORAPDlIFVA5cUq9YVXI. 
> > 
> > Please contact your system administrator. 
> > 
> > Add correct host key in /Users/J_Honrubia/.ssh/known_hosts to get rid of 
> > this message. 
> > 
> > Offending ECDSA key in /Users/J_Honrubia/.ssh/known_hosts:4 
> > 
> > ECDSA host key for trac.sagemath.org has changed and you have requested 
> > strict checking. 
> > 
> > Host key verification failed. 
> > 
> > 
> > Any clue? 
> > 
> > -- 
> > You received this message because you are subscribed to the Google 
> Groups 
> > "sage-devel" group. 
> > To unsubscribe from this group and stop receiving emails from it, send 
> an 
> > email to sage-devel+...@googlegroups.com . 
> > To post to this group, send email to sage-...@googlegroups.com 
> . 
> > Visit this group at https://groups.google.com/group/sage-devel. 
> > For more options, visit https://groups.google.com/d/optout. 
>

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[sage-devel] Trac error on push

[jhonrubia6]

After working on ticket #21052, I committed the changed file and tried to 
git trac push and get the error

git_trac.git_error.GitError: git returned with non-zero exit code (128) 
when executing "git push trac 
HEAD:refs/heads/u/jhonrubia6/add_pictures_to_implicit_plot3d_py"

STDERR: @@@

STDERR: @WARNING: REMOTE HOST IDENTIFICATION HAS CHANGED! @

STDERR: @@@

STDERR: IT IS POSSIBLE THAT SOMEONE IS DOING SOMETHING NASTY!

STDERR: Someone could be eavesdropping on you right now 
(man-in-the-middle attack)!

STDERR: It is also possible that a host key has just been changed.

STDERR: The fingerprint for the ECDSA key sent by the remote host is

STDERR: SHA256:4Op/q3b5792x+F1lHSKRi5UIORAPDlIFVA5cUq9YVXI.

STDERR: Please contact your system administrator.

STDERR: Add correct host key in /Users/J_Honrubia/.ssh/known_hosts to 
get rid of this message.

STDERR: Offending ECDSA key in /Users/J_Honrubia/.ssh/known_hosts:4

STDERR: ECDSA host key for trac.sagemath.org has changed and you have 
requested strict checking.

STDERR: Host key verification failed.

STDERR: fatal: Could not read from remote repository.

STDERR: 

STDERR: Please make sure you have the correct access rights

STDERR: and the repository exists.


git trac config works fine without errors.

but

OnoSendaiII:sage J_Honrubia$ ssh g...@trac.sagemath.org info

@@@

@WARNING: REMOTE HOST IDENTIFICATION HAS CHANGED! @

@@@

IT IS POSSIBLE THAT SOMEONE IS DOING SOMETHING NASTY!

Someone could be eavesdropping on you right now (man-in-the-middle attack)!

It is also possible that a host key has just been changed.

The fingerprint for the ECDSA key sent by the remote host is

SHA256:4Op/q3b5792x+F1lHSKRi5UIORAPDlIFVA5cUq9YVXI.

Please contact your system administrator.

Add correct host key in /Users/J_Honrubia/.ssh/known_hosts to get rid of 
this message.

Offending ECDSA key in /Users/J_Honrubia/.ssh/known_hosts:4

ECDSA host key for trac.sagemath.org has changed and you have requested 
strict checking.

Host key verification failed.

Any clue?

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[sage-devel] Re: error building sagelib-7.4.beta4

[jhonrubia6]

hardware is macbook air and OS version is OS 10.11.6

El jueves, 15 de septiembre de 2016, 18:28:04 (UTC+2), jhonrubia6 escribió:
>
> Hi, I am getting an error building the beta4 (made a 'make distclean' 
> before). Below the last lines of the log
>
> [sagelib-7.4.beta4] [  1/269] Cythonizing sage/structure/misc.pyx
>
> [sagelib-7.4.beta4] 
>
> [sagelib-7.4.beta4] Error compiling Cython file:
>
> [sagelib-7.4.beta4] 
> 
>
> [sagelib-7.4.beta4] ...
>
> [sagelib-7.4.beta4] """
>
> [sagelib-7.4.beta4] Miscellaneous utilities
>
> [sagelib-7.4.beta4] """
>
> [sagelib-7.4.beta4] 
>
> [sagelib-7.4.beta4] from cpython.object cimport PyObject, Py_TYPE, 
> descrgetfunc
>
> [sagelib-7.4.beta4] ^
>
> [sagelib-7.4.beta4] 
> 
>
> [sagelib-7.4.beta4] 
>
> [sagelib-7.4.beta4] sage/structure/misc.pyx:5:0: 
> 'cpython/object/descrgetfunc.pxd' not found
>
> [sagelib-7.4.beta4] 
>
> [sagelib-7.4.beta4] Error compiling Cython file:
>
> [sagelib-7.4.beta4] 
> 
>
> [sagelib-7.4.beta4] ...
>
> [sagelib-7.4.beta4] dummy_error_message.cls = type(self)
>
> [sagelib-7.4.beta4] dummy_error_message.name = name
>
> [sagelib-7.4.beta4] raise dummy_attribute_error
>
> [sagelib-7.4.beta4] attribute = attr
>
> [sagelib-7.4.beta4] # Check for a descriptor (__get__ in Python)
>
> [sagelib-7.4.beta4] cdef descrgetfunc getter = 
> Py_TYPE(attribute).tp_descr_get
>
> [sagelib-7.4.beta4] ^
>
> [sagelib-7.4.beta4] 
> 
>
> [sagelib-7.4.beta4] 
>
> [sagelib-7.4.beta4] sage/structure/misc.pyx:303:9: 'descrgetfunc' is not a 
> type identifier
>
> [sagelib-7.4.beta4] 
>
> [sagelib-7.4.beta4] Error compiling Cython file:
>
> [sagelib-7.4.beta4] 
> 
>
> [sagelib-7.4.beta4] ...
>
> [sagelib-7.4.beta4] dummy_error_message.cls = type(self)
>
> [sagelib-7.4.beta4] dummy_error_message.name = name
>
> [sagelib-7.4.beta4] raise dummy_attribute_error
>
> [sagelib-7.4.beta4] attribute = attr
>
> [sagelib-7.4.beta4] # Check for a descriptor (__get__ in Python)
>
> [sagelib-7.4.beta4] cdef descrgetfunc getter = 
> Py_TYPE(attribute).tp_descr_get
>
> [sagelib-7.4.beta4] ^
>
> [sagelib-7.4.beta4] 
> 
>
> [sagelib-7.4.beta4] 
>
> [sagelib-7.4.beta4] sage/structure/misc.pyx:303:49: Object of type 
> 'PyTypeObject' has no attribute 'tp_descr_get'
>
> [sagelib-7.4.beta4] Traceback (most recent call last):
>
> [sagelib-7.4.beta4]   File 
> "/Users/J_Honrubia/Sage/sage/local/lib/python2.7/site-packages/Cython-0.24-py2.7-macosx-10.9-x86_64.egg/Cython/Build/Dependencies.py",
>  
> line 1052, in cythonize_one_helper
>
> [sagelib-7.4.beta4] return cythonize_one(*m)
>
> [sagelib-7.4.beta4]   File 
> "/Users/J_Honrubia/Sage/sage/local/lib/python2.7/site-packages/Cython-0.24-py2.7-macosx-10.9-x86_64.egg/Cython/Build/Dependencies.py",
>  
> line 1034, in cythonize_one
>
> [sagelib-7.4.beta4] raise CompileError(None, pyx_file)
>
> [sagelib-7.4.beta4] CompileError: sage/structure/misc.pyx
>
> [sagelib-7.4.beta4] [  2/269] Cythonizing sage/structure/parent.pyx
>
> [sagelib-7.4.beta4] 
> 
>
> [sagelib-7.4.beta4] Traceback (most recent call last):
>
> [sagelib-7.4.beta4]   File "setup.py", line 597, in 
>
> [sagelib-7.4.beta4] run_cythonize()
>
> [sagelib-7.4.beta4]   File "setup.py", line 589, in run_cythonize
>
> [sagelib-7.4.beta4] 'profile': profile,
>
> [sagelib-7.4.beta4]   File 
> "/Users/J_Honrubia/Sage/sage/local/lib/python2.7/site-packages/Cython-0.24-py2.7-macosx-10.9-x86_64.egg/Cython/Build/Dependencies.py",
>  
> line 903, in cythonize
>
> [sagelib-7.4.beta4] result.get(9)  # seconds
>
> [sagelib-7.4.beta4]   File 
> "/Users/J_Honrubia/Sage/sage/local/lib/python/multiprocessing/pool.py", 
> line 567, in get
>
> [sagelib-7.4.beta4] raise self._value
>
> [sagelib-7.4.beta4] CompileError: sage/structure/misc.pyx
>
> [sagelib-7.4.beta4] 
> 

[sage-devel] error building sagelib-7.4.beta4

[jhonrubia6]

Hi, I am getting an error building the beta4 (made a 'make distclean' 
before). Below the last lines of the log

[sagelib-7.4.beta4] [  1/269] Cythonizing sage/structure/misc.pyx

[sagelib-7.4.beta4] 

[sagelib-7.4.beta4] Error compiling Cython file:

[sagelib-7.4.beta4] 


[sagelib-7.4.beta4] ...

[sagelib-7.4.beta4] """

[sagelib-7.4.beta4] Miscellaneous utilities

[sagelib-7.4.beta4] """

[sagelib-7.4.beta4] 

[sagelib-7.4.beta4] from cpython.object cimport PyObject, Py_TYPE, 
descrgetfunc

[sagelib-7.4.beta4] ^

[sagelib-7.4.beta4] 


[sagelib-7.4.beta4] 

[sagelib-7.4.beta4] sage/structure/misc.pyx:5:0: 
'cpython/object/descrgetfunc.pxd' not found

[sagelib-7.4.beta4] 

[sagelib-7.4.beta4] Error compiling Cython file:

[sagelib-7.4.beta4] 


[sagelib-7.4.beta4] ...

[sagelib-7.4.beta4] dummy_error_message.cls = type(self)

[sagelib-7.4.beta4] dummy_error_message.name = name

[sagelib-7.4.beta4] raise dummy_attribute_error

[sagelib-7.4.beta4] attribute = attr

[sagelib-7.4.beta4] # Check for a descriptor (__get__ in Python)

[sagelib-7.4.beta4] cdef descrgetfunc getter = 
Py_TYPE(attribute).tp_descr_get

[sagelib-7.4.beta4] ^

[sagelib-7.4.beta4] 


[sagelib-7.4.beta4] 

[sagelib-7.4.beta4] sage/structure/misc.pyx:303:9: 'descrgetfunc' is not a 
type identifier

[sagelib-7.4.beta4] 

[sagelib-7.4.beta4] Error compiling Cython file:

[sagelib-7.4.beta4] 


[sagelib-7.4.beta4] ...

[sagelib-7.4.beta4] dummy_error_message.cls = type(self)

[sagelib-7.4.beta4] dummy_error_message.name = name

[sagelib-7.4.beta4] raise dummy_attribute_error

[sagelib-7.4.beta4] attribute = attr

[sagelib-7.4.beta4] # Check for a descriptor (__get__ in Python)

[sagelib-7.4.beta4] cdef descrgetfunc getter = 
Py_TYPE(attribute).tp_descr_get

[sagelib-7.4.beta4] ^

[sagelib-7.4.beta4] 


[sagelib-7.4.beta4] 

[sagelib-7.4.beta4] sage/structure/misc.pyx:303:49: Object of type 
'PyTypeObject' has no attribute 'tp_descr_get'

[sagelib-7.4.beta4] Traceback (most recent call last):

[sagelib-7.4.beta4]   File 
"/Users/J_Honrubia/Sage/sage/local/lib/python2.7/site-packages/Cython-0.24-py2.7-macosx-10.9-x86_64.egg/Cython/Build/Dependencies.py",
 
line 1052, in cythonize_one_helper

[sagelib-7.4.beta4] return cythonize_one(*m)

[sagelib-7.4.beta4]   File 
"/Users/J_Honrubia/Sage/sage/local/lib/python2.7/site-packages/Cython-0.24-py2.7-macosx-10.9-x86_64.egg/Cython/Build/Dependencies.py",
 
line 1034, in cythonize_one

[sagelib-7.4.beta4] raise CompileError(None, pyx_file)

[sagelib-7.4.beta4] CompileError: sage/structure/misc.pyx

[sagelib-7.4.beta4] [  2/269] Cythonizing sage/structure/parent.pyx

[sagelib-7.4.beta4] 


[sagelib-7.4.beta4] Traceback (most recent call last):

[sagelib-7.4.beta4]   File "setup.py", line 597, in 

[sagelib-7.4.beta4] run_cythonize()

[sagelib-7.4.beta4]   File "setup.py", line 589, in run_cythonize

[sagelib-7.4.beta4] 'profile': profile,

[sagelib-7.4.beta4]   File 
"/Users/J_Honrubia/Sage/sage/local/lib/python2.7/site-packages/Cython-0.24-py2.7-macosx-10.9-x86_64.egg/Cython/Build/Dependencies.py",
 
line 903, in cythonize

[sagelib-7.4.beta4] result.get(9)  # seconds

[sagelib-7.4.beta4]   File 
"/Users/J_Honrubia/Sage/sage/local/lib/python/multiprocessing/pool.py", 
line 567, in get

[sagelib-7.4.beta4] raise self._value

[sagelib-7.4.beta4] CompileError: sage/structure/misc.pyx

[sagelib-7.4.beta4] 


[sagelib-7.4.beta4] Error building the Sage library

[sagelib-7.4.beta4] 


[sagelib-7.4.beta4] Please email sage-devel 
(http://groups.google.com/group/sage-devel)

[sagelib-7.4.beta4] explaining the problem and including the relevant part 
of the log file

[sagelib-7.4.beta4]   
/Users/J_Honrubia/Sage/sage/logs/pkgs/sagelib-7.4.beta4.log

[sagelib-7.4.beta4] Describe your computer, operating system, etc.

[sagelib-7.4.beta4] 


[sagelib-7.4.beta4] make[3]: *** [sage] Error 1

[sagelib-7.4.beta4] 

[sagelib-7.4.beta4] real 0m9.758s

[sagelib-7.4.beta4] user 0m5.903s

[sagelib-7.4.beta4] sys 0m2.124s

make[2]: *** [sagelib] Error 2

make[1]: *** [all] Error 2


real 0m11.089s

user 0m6.514s

sys 0m2.555s

***

Error building Sage.


The following 

[sage-devel] Re: Trac Authentication error

[jhonrubia6]

Volker, I checked that, same error. I also tested the authentication with 

OnoSendaiII:sage J_Honrubia$ ssh g...@trac.sagemath.org info

hello jhonrubia6, this is git@trac running gitolite3 3.5.3.1-2 (Debian) on git 
1.9.1



 R Wsage


So the authentication seems ok. There must be something with my trac 
config...

El domingo, 26 de junio de 2016, 0:31:39 (UTC+2), Volker Braun escribió:
>
> The realm is correct.
>
> Are you sure that you are executing the right git-trac script? Use 
> /path/to/git-trac config to be sure you aren't using an old version in your 
> PATH
>
>
>
> On Saturday, June 25, 2016 at 1:07:01 PM UTC+2, jhonrubia6 wrote:
>>
>> After the move of the trac server I get authentication errors when using 
>> git trac commands. For example, after 
>>
>> git trac config
>> I get
>>
>> Trac xmlrpc URL:
>>
>> http://trac.sagemath.org/xmlrpc (anonymous)
>>
>> http://trac.sagemath.org/login/xmlrpc (authenticated)
>>
>> realm sage.math.washington.edu
>>
>> Username:**
>>
>> Password:*
>>
>> Retrieving SSH keys...
>>
>> Traceback (most recent call last):
>>
>>   File "/Users/J_Honrubia/Sage/git-trac-command/bin/git-trac", line 18, 
>> in 
>>
>> cmdline.launch()
>>
>>   File "/Users/J_Honrubia/Sage/git-trac-command/git_trac/cmdline.py", 
>> line 252, in launch
>>
>> app.print_config()
>>
>>   File "/Users/J_Honrubia/Sage/git-trac-command/git_trac/app.py", line 
>> 349, in print_config
>>
>> for key in self.trac.get_ssh_fingerprints():
>>
>>   File "/Users/J_Honrubia/Sage/git-trac-command/git_trac/trac_server.py", 
>> line 88, in get_ssh_fingerprints
>>
>> for key in self.get_ssh_keys():
>>
>>   File "/Users/J_Honrubia/Sage/git-trac-command/git_trac/trac_server.py", 
>> line 79, in get_ssh_keys
>>
>> return self.authenticated_proxy.sshkeys.getkeys()
>>
>>   File 
>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xmlrpclib.py"
>> , line 1240, in __call__
>>
>> return self.__send(self.__name, args)
>>
>>   File 
>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xmlrpclib.py"
>> , line 1599, in __request
>>
>> verbose=self.__verbose
>>
>>   File 
>> "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xmlrpclib.py"
>> , line 1280, in request
>>
>> return self.single_request(host, handler, request_body, verbose)
>>
>>   File 
>> "/Users/J_Honrubia/Sage/git-trac-command/git_trac/digest_transport_py2.py"
>> , line 134, in single_request
>>
>> raise TracAuthenticationError()
>>
>> git_trac.trac_error.TracAuthenticationError: Authentication with trac 
>> server failed.
>>
>> (obviously user and pass has been edited)
>> Do I have to reinstall the git-trac command to make it work or I have to 
>> tweak my rsa files?
>>
>>

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[sage-devel] Re: Trac Authentication error

[jhonrubia6]

Please install the latest update of git-trac.
> Note e.g. that " realm sage.math.washington.edu" is certainly incorrect 
> in your log.

I have done that 

git clone https://github.com/sagemath/git-trac-command.git


 but I still get the realm sage.math.washington.edu when executing 
git trac config

Updated package is at https://trac.sagemath.org/ticket/20880


I have modified both files (build/pkgs/git_trac/checksums.ini 

 and build/pkgs/git_trac/package-version.txt 
)
 
but still get the same authentication error. Do I have to rebuild?

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[sage-devel] Trac Authentication error

[jhonrubia6]

After the move of the trac server I get authentication errors when using 
git trac commands. For example, after 

git trac config
I get

Trac xmlrpc URL:

http://trac.sagemath.org/xmlrpc (anonymous)

http://trac.sagemath.org/login/xmlrpc (authenticated)

realm sage.math.washington.edu

Username:**

Password:*

Retrieving SSH keys...

Traceback (most recent call last):

  File "/Users/J_Honrubia/Sage/git-trac-command/bin/git-trac", line 18, in 


cmdline.launch()

  File "/Users/J_Honrubia/Sage/git-trac-command/git_trac/cmdline.py", line 
252, in launch

app.print_config()

  File "/Users/J_Honrubia/Sage/git-trac-command/git_trac/app.py", line 349, 
in print_config

for key in self.trac.get_ssh_fingerprints():

  File "/Users/J_Honrubia/Sage/git-trac-command/git_trac/trac_server.py", 
line 88, in get_ssh_fingerprints

for key in self.get_ssh_keys():

  File "/Users/J_Honrubia/Sage/git-trac-command/git_trac/trac_server.py", 
line 79, in get_ssh_keys

return self.authenticated_proxy.sshkeys.getkeys()

  File 
"/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xmlrpclib.py"
, line 1240, in __call__

return self.__send(self.__name, args)

  File 
"/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xmlrpclib.py"
, line 1599, in __request

verbose=self.__verbose

  File 
"/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/xmlrpclib.py"
, line 1280, in request

return self.single_request(host, handler, request_body, verbose)

  File 
"/Users/J_Honrubia/Sage/git-trac-command/git_trac/digest_transport_py2.py", 
line 134, in single_request

raise TracAuthenticationError()

git_trac.trac_error.TracAuthenticationError: Authentication with trac 
server failed.

(obviously user and pass has been edited)
Do I have to reinstall the git-trac command to make it work or I have to 
tweak my rsa files?

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[sage-devel] Re: {trac,git}.sagemath.org downtime Wednesday 6/22

[jhonrubia6]

Yeah!. Thanks Erik.


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[sage-devel] trac's automerging error

[jhonrubia6]

I noticed some typos on #10180 so I prepared a patch and committed, but now 
I see the branch in red in trac ticketing system and an error "trac's auto 
merging failed"
maybe the ticket was already closed  even if the status was needs_review , 
I do not understand this error, nor how to solve it. 

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[sage-devel] Re: reset a commit in trac

[jhonrubia6]

thank you Volker. I think it did go ok.

El sábado, 21 de mayo de 2016, 20:32:19 (UTC+2), Volker Braun escribió:
>
> Assuming that you have the branch checked out:
>
> git reset --hard HEAD~  # go back one commit
> git trac push --force   # if you use the git-trac script
>
> On Saturday, May 21, 2016 at 8:04:04 PM UTC+2, jhonrubia6 wrote:
>>
>> Is there a way to reset the last (erroneous) commit in trac ticket 20636?
>> I forgot to checkout the correct branch before doing the changes and I 
>> committed and pushed a commit that does not belong to this ticket. I posted 
>> a comment, but I do not know how to revert the situation if possible
>> Javier
>>
>

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[sage-devel] reset a commit in trac

[jhonrubia6]

Is there a way to reset the last (erroneous) commit in trac ticket 20636?
I forgot to checkout the correct branch before doing the changes and I 
committed and pushed a commit that does not belong to this ticket. I posted 
a comment, but I do not know how to revert the situation if possible
Javier

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[sage-devel] new pictures in plot3d ...

[jhonrubia6]

Hi, 
easy one
anyone to review http://trac.sagemath.org/ticket/20109 ?
then  http://trac.sagemath.org/ticket/20345 and 
http://trac.sagemath.org/ticket/20346 which depend on #20109 ?
thanks

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[sage-devel] Error building documentation

[jhonrubia6]

Hi,
I've just checkout the branch ticket #16804, and I get an error building 
the documentation I can not clean (tried $make doc-clean unsuccesfully). 
some clue?

[reference] loading pickled environment... not yet created

[reference] Compiling the master document

[reference] WARNING: intersphinx inventory 
'/Users/J_Honrubia/Sage/sage/local/share/doc/sage/inventory/en/reference/objects.inv'
 
not fetchable due to : [Errno 2] No such file or 
directory: 
'/Users/J_Honrubia/Sage/sage/local/share/doc/sage/inventory/en/reference/objects.inv'

Error building the documentation.

Traceback (most recent call last):

  File "/Users/J_Honrubia/Sage/sage/local/lib/python/runpy.py", line 162, 
in _run_module_as_main

"__main__", fname, loader, pkg_name)

  File "/Users/J_Honrubia/Sage/sage/local/lib/python/runpy.py", line 72, in 
_run_code

exec code in run_globals

  File 
"/Users/J_Honrubia/Sage/sage/local/lib/python2.7/site-packages/sage_setup/docbuild/__main__.py",
 
line 2, in 

main()

  File 
"/Users/J_Honrubia/Sage/sage/local/lib/python2.7/site-packages/sage_setup/docbuild/__init__.py",
 
line 1629, in main

builder()

  File 
"/Users/J_Honrubia/Sage/sage/local/lib/python2.7/site-packages/sage_setup/docbuild/__init__.py",
 
line 284, in _wrapper

getattr(get_builder(document), 'inventory')(*args, **kwds)

  File 
"/Users/J_Honrubia/Sage/sage/local/lib/python2.7/site-packages/sage_setup/docbuild/__init__.py",
 
line 508, in _wrapper

getattr(DocBuilder(self.name, lang), format)(*args, **kwds)

  File 
"/Users/J_Honrubia/Sage/sage/local/lib/python2.7/site-packages/sage_setup/docbuild/__init__.py",
 
line 103, in f

runsphinx()

  File 
"/Users/J_Honrubia/Sage/sage/local/lib/python2.7/site-packages/sage_setup/docbuild/sphinxbuild.py",
 
line 213, in runsphinx

raise exception

OSError: [reference] WARNING: intersphinx inventory 
'/Users/J_Honrubia/Sage/sage/local/share/doc/sage/inventory/en/reference/objects.inv'
 
not fetchable due to : [Errno 2] No such file or 
directory: 
'/Users/J_Honrubia/Sage/sage/local/share/doc/sage/inventory/en/reference/objects.inv'



Note: incremental documentation builds sometimes cause spurious

error messages. To be certain that these are real errors, run

"make doc-clean" first and try again.

make[2]: *** [doc-html] Error 1

make[1]: *** [all] Error 2


real 16m35.335s

user 15m28.780s

sys 0m40.856s

***

Error building Sage.

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[sage-devel] Re: online documentation and "long time"

[jhonrubia6]

I created ticket 20339 for that, and fixed it. (needs review if you wish)

El martes, 22 de marzo de 2016, 9:49:29 (UTC+1), Samuel Lelievre escribió:
>
> The page 
>
> http://doc.sagemath.org/html/en/reference/plotting/sage/plot/plot.html 
>
> has this: 
>
> Pi Axis 
>
> sage: g1 = plot(sin(x), 0, 2*pi) 
> sage: g2 = plot(cos(x), 0, 2*pi, linestyle = "--") 
> sage: (g1+g2).show(ticks=pi/6, tick_formatter=pi)  # long time 
> # show their sum, nicely formatted 
>
> with no illustration appearing after the code. 
>
> Shouldn't the "long time" stuff appear anyway in the online documentation? 
>

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[sage-devel] Re: online documentation and "long time"

[jhonrubia6]

As far as I know there is only a switch to "all" plots. ¿Should we append 
the "long time" comment to the sphinx_plot command, in case somebody 
decides to implement such a swithc later?

El martes, 22 de marzo de 2016, 11:24:26 (UTC+1), Dima Pasechnik escribió:
>
>
>
> On Tuesday, March 22, 2016 at 9:53:42 AM UTC, Eric Gourgoulhon wrote:
>>
>>
>>
>> Le mardi 22 mars 2016 10:38:43 UTC+1, Harald Schilly a écrit :
>>>
>>>
>>>
>>> On Tuesday, March 22, 2016 at 9:49:29 AM UTC+1, Samuel Lelievre wrote:


 Shouldn't the "long time" stuff appear anyway in the online 
 documentation? 

>>>
>>> Well, do you have any idea how to do that?
>>>
>>> It's easy: the Sphinx plot directive is independent from the doctest 
>> one.  One has simply to repeat the plot instructions. 
>> In the above case (assuming we maintain the long time marker), this would 
>> be:
>>
>> sage: g1 = plot(sin(x), 0, 2*pi)
>> sage: g2 = plot(cos(x), 0, 2*pi, linestyle = "--")
>> sage: (g1+g2).show(ticks=pi/6, tick_formatter=pi)  # long time
>>
>> .. PLOT::
>> 
>> g1 = plot(sin(x), 0, 2*pi, ticks=pi/6, tick_formatter=pi)
>> g2 = plot(cos(x), 0, 2*pi, linestyle = "--", ticks=pi/6, 
>> tick_formatter=pi)
>> sphinx_plot(g1+g2)
>>
>>  
> well,  I suppose one wants to have all # long time docs in your manual, 
> plot or no plot. Is there an switch to do this?
>
>  
>

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[sage-devel] Re: online documentation and "long time"

[jhonrubia6]

I remember that a few of the plots just didn't work (and I didn't find a 
work around) so I dropped them . I will look into it and my notes and get 
back with either a trac ticket or more information on this.

El martes, 22 de marzo de 2016, 10:53:42 (UTC+1), Eric Gourgoulhon escribió:
>
>
>
> Le mardi 22 mars 2016 10:38:43 UTC+1, Harald Schilly a écrit :
>>
>>
>>
>> On Tuesday, March 22, 2016 at 9:49:29 AM UTC+1, Samuel Lelievre wrote:
>>>
>>>
>>> Shouldn't the "long time" stuff appear anyway in the online 
>>> documentation? 
>>>
>>
>> Well, do you have any idea how to do that?
>>
>> It's easy: the Sphinx plot directive is independent from the doctest 
> one.  One has simply to repeat the plot instructions. 
> In the above case (assuming we maintain the long time marker), this would 
> be:
>
> sage: g1 = plot(sin(x), 0, 2*pi)
> sage: g2 = plot(cos(x), 0, 2*pi, linestyle = "--")
> sage: (g1+g2).show(ticks=pi/6, tick_formatter=pi)  # long time
>
> .. PLOT::
> 
> g1 = plot(sin(x), 0, 2*pi, ticks=pi/6, tick_formatter=pi)
> g2 = plot(cos(x), 0, 2*pi, linestyle = "--", ticks=pi/6, 
> tick_formatter=pi)
> sphinx_plot(g1+g2)
>
>
>

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Re: [sage-devel] Re: error rebuilding sage

[jhonrubia6]

So, if I understand you correctly, say I have sage 7.0 on my machine and 
try to review some old ticket, do you recommend me to merge the ticket 
branch with my copy 
git merge tiket_branch
and then review it?
If the ticket does not compile ok for whatever reason, there will be no way 
to get rid of it on my copy or am I wrong?


El jueves, 4 de febrero de 2016, 21:49:36 (UTC+1), Volker Braun escribió:
>
> Just to point out the obvious: If you check out #18408 then you get 
> Sage-6.8.beta7
>
> You should merge in the latest Sage if you want to review that ticket; Its 
> likely that there are merge conflicts anyways which need to be resolved 
> first.
>
> On Thursday, February 4, 2016 at 7:52:20 PM UTC+1, Jeroen Demeyer wrote:
>>
>> On 2016-02-04 19:32, jhonrubia6 wrote: 
>> > I passed that point and now fails building ecm,... 
>> > I do not understand what I am making wrong. I had a working 
>> installation 
>> > on 7.0, then after checking out a ticket to review (#18408)I tried to 
>> > build again and I'm having a lot of problems to get the installation 
>> > working again 
>>
>> This should be fixed by 
>> http://trac.sagemath.org/ticket/19233 
>>
>> Which version of Sage is that? 
>>
>

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Re: [sage-devel] Re: error rebuilding sage

[jhonrubia6]

I meant my local copy of the source code. 
Ok. I will proceed as you say, thank you all

El sábado, 6 de febrero de 2016, 10:32:56 (UTC+1), Jeroen Demeyer escribió:
>
> On 2016-02-06 10:28, jhonrubia6 wrote: 
> > So, if I understand you correctly, say I have sage 7.0 on my machine and 
> > try to review some old ticket, do you recommend me to merge the ticket 
> > branch with my copy 
>
> I don't know what you mean with "my copy". Anyway, merging with a more 
> recent version of Sage (preferably the latest beta) is indeed a good 
> thing to do. 
>
>

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Re: [sage-devel] Re: error rebuilding sage

[jhonrubia6]

Ok, that explains it (I keep learning, even the obvious). So if I 
understand correctly I should have merged first, before rebuilding the 
source. Now, it seems there is no  way back I guess, other than getting a 
new copy of the source code.
How do I know the version of a given ticket which needs review?


El jueves, 4 de febrero de 2016, 21:49:36 (UTC+1), Volker Braun escribió:
>
> Just to point out the obvious: If you check out #18408 then you get 
> Sage-6.8.beta7
>
> You should merge in the latest Sage if you want to review that ticket; Its 
> likely that there are merge conflicts anyways which need to be resolved 
> first.
>
> On Thursday, February 4, 2016 at 7:52:20 PM UTC+1, Jeroen Demeyer wrote:
>>
>> On 2016-02-04 19:32, jhonrubia6 wrote: 
>> > I passed that point and now fails building ecm,... 
>> > I do not understand what I am making wrong. I had a working 
>> installation 
>> > on 7.0, then after checking out a ticket to review (#18408)I tried to 
>> > build again and I'm having a lot of problems to get the installation 
>> > working again 
>>
>> This should be fixed by 
>> http://trac.sagemath.org/ticket/19233 
>>
>> Which version of Sage is that? 
>>
>

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[sage-devel] Re: error rebuilding sage

[jhonrubia6]

... and the new error  (on make distclean && make) is 

/Users/J_Honrubia/Sage/sage-6.10/sage/build/pipestatus "sage-spkg -f 
setuptools-12.4 2>&1" "tee -a 
/Users/J_Honrubia/Sage/sage-6.10/sage/logs/pkgs/setuptools-12.4.log"

/Users/J_Honrubia/Sage/sage-6.10/sage/src/bin/sage-env: line 434: 
/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/R/share/Makevars.site: No 
such file or directory

Found local metadata for setuptools-12.4

Attempting to download package setuptools-12.4.tar.gz from mirrors

Downloading the Sage mirror list

Traceback (most recent call last):

  File "/Users/J_Honrubia/Sage/sage-6.10/sage/src/bin/sage-download-file", 
line 457, in 

tarball.download()

  File "/Users/J_Honrubia/Sage/sage-6.10/sage/src/bin/sage-download-file", 
line 392, in download

for mirror in MirrorList():

  File "/Users/J_Honrubia/Sage/sage-6.10/sage/src/bin/sage-download-file", 
line 152, in __init__

with contextlib.closing(urllib.urlopen(self.URL)) as f:

  File "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/urllib.py", 
line 87, in urlopen

return opener.open(url)

  File "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/urllib.py", 
line 213, in open

return getattr(self, name)(url)

  File "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/urllib.py", 
line 350, in open_http

h.endheaders(data)

  File "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/httplib.py", 
line 997, in endheaders

self._send_output(message_body)

  File "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/httplib.py", 
line 850, in _send_output

self.send(msg)

  File "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/httplib.py", 
line 812, in send

self.connect()

  File "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/httplib.py", 
line 793, in connect

self.timeout, self.source_address)

  File "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/socket.py", 
line 555, in create_connection

for res in getaddrinfo(host, port, 0, SOCK_STREAM):

IOError: [Errno socket error] [Errno 8] nodename nor servname provided, or 
not known

make[2]: *** 
[/Users/J_Honrubia/Sage/sage-6.10/sage/local/var/lib/sage/installed/setuptools-12.4]
 
Error 1

make[1]: *** [all] Error 2


real 729m8.876s

user 123m22.857s

sys 17m48.141s

***

Error building Sage.


The following package(s) may have failed to build:


The build directory may contain configuration files and other potentially

helpful information. WARNING: if you now run 'make' again, the build

directory will, by default, be deleted. Set the environment variable

SAGE_KEEP_BUILT_SPKGS to 'yes' to prevent this.


make: *** [all] Error 1

O

El miércoles, 3 de febrero de 2016, 18:41:43 (UTC+1), Volker Braun escribió:
>
>
>
> On Wednesday, February 3, 2016 at 6:25:46 PM UTC+1, jhonrubia6 wrote:
>>
>> after make dist-clean && make I've got an error 
>>
>
> its "make distclean" 
>

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[sage-devel] Re: error rebuilding sage

[jhonrubia6]

As the compilation dos through the night, maybe there was some internet 
downtime that I am not aware of. I will try again and keep track of the 
router log, thank you for your help

El jueves, 4 de febrero de 2016, 17:36:46 (UTC+1), Dima Pasechnik escribió:
>
> did the internet connection from the machine die during the build, or 
> perhaps you are behind some big bad firewall?
>
> On Thursday, 4 February 2016 15:21:59 UTC, jhonrubia6 wrote:
>>
>> ... and the new error  (on make distclean && make) is 
>>
>> /Users/J_Honrubia/Sage/sage-6.10/sage/build/pipestatus "sage-spkg -f 
>> setuptools-12.4 2>&1" "tee -a 
>> /Users/J_Honrubia/Sage/sage-6.10/sage/logs/pkgs/setuptools-12.4.log"
>>
>> /Users/J_Honrubia/Sage/sage-6.10/sage/src/bin/sage-env: line 434: 
>> /Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/R/share/Makevars.site: No 
>> such file or directory
>>
>> Found local metadata for setuptools-12.4
>>
>> Attempting to download package setuptools-12.4.tar.gz from mirrors
>>
>> Downloading the Sage mirror list
>>
>> Traceback (most recent call last):
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/src/bin/sage-download-file", line 
>> 457, in 
>>
>> tarball.download()
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/src/bin/sage-download-file", line 
>> 392, in download
>>
>> for mirror in MirrorList():
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/src/bin/sage-download-file", line 
>> 152, in __init__
>>
>> with contextlib.closing(urllib.urlopen(self.URL)) as f:
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/urllib.py", line 
>> 87, in urlopen
>>
>> return opener.open(url)
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/urllib.py", line 
>> 213, in open
>>
>> return getattr(self, name)(url)
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/urllib.py", line 
>> 350, in open_http
>>
>> h.endheaders(data)
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/httplib.py", line 
>> 997, in endheaders
>>
>> self._send_output(message_body)
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/httplib.py", line 
>> 850, in _send_output
>>
>> self.send(msg)
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/httplib.py", line 
>> 812, in send
>>
>> self.connect()
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/httplib.py", line 
>> 793, in connect
>>
>> self.timeout, self.source_address)
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/socket.py", line 
>> 555, in create_connection
>>
>> for res in getaddrinfo(host, port, 0, SOCK_STREAM):
>>
>> IOError: [Errno socket error] [Errno 8] nodename nor servname provided, 
>> or not known
>>
>> make[2]: *** 
>> [/Users/J_Honrubia/Sage/sage-6.10/sage/local/var/lib/sage/installed/setuptools-12.4]
>>  
>> Error 1
>>
>> make[1]: *** [all] Error 2
>>
>>
>> real 729m8.876s
>>
>> user 123m22.857s
>>
>> sys 17m48.141s
>>
>> ***
>>
>> Error building Sage.
>>
>>
>> The following package(s) may have failed to build:
>>
>>
>> The build directory may contain configuration files and other potentially
>>
>> helpful information. WARNING: if you now run 'make' again, the build
>>
>> directory will, by default, be deleted. Set the environment variable
>>
>> SAGE_KEEP_BUILT_SPKGS to 'yes' to prevent this.
>>
>>
>> make: *** [all] Error 1
>>
>> O
>>
>> El miércoles, 3 de febrero de 2016, 18:41:43 (UTC+1), Volker Braun 
>> escribió:
>>>
>>>
>>>
>>> On Wednesday, February 3, 2016 at 6:25:46 PM UTC+1, jhonrubia6 wrote:
>>>>
>>>> after make dist-clean && make I've got an error 
>>>>
>>>
>>> its "make distclean" 
>>>
>>

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[sage-devel] Re: error rebuilding sage

[jhonrubia6]

I passed that point and now fails building ecm,... 
I do not understand what I am making wrong. I had a working installation on 
7.0, then after checking out a ticket to review (#18408)I tried to build 
again and I'm having a lot of problems to get the installation working again

Now building GMP-ECM...

make  all-recursive

Making all in x86_64

m4 -I../ -DOPERATION_mulredc1 `test -f mulredc1.asm || echo 
'./'`mulredc1.asm >mulredc1.s

/bin/sh ../libtool   --mode=compile gcc  -march=native -g -O3  -fPIC -c -o 
mulredc1.lo mulredc1.s

libtool: compile:  gcc -march=native -g -O3 -fPIC -c mulredc1.s -o 
mulredc1.o

m4 -I../ -DOPERATION_mulredc2 `test -f mulredc2.asm || echo 
'./'`mulredc2.asm >mulredc2.s

/bin/sh ../libtool   --mode=compile gcc  -march=native -g -O3  -fPIC -c -o 
mulredc2.lo mulredc2.s

libtool: compile:  gcc -march=native -g -O3 -fPIC -c mulredc2.s -o 
mulredc2.o

mulredc2.s:40:8: error: invalid alignment value

.align 64 # Opteron L1 code cache line is 64 bytes long

   ^

mulredc2.s:150:8: error: invalid alignment value

.align 32,,16

   ^

make[5]: *** [mulredc2.lo] Error 1

rm mulredc2.s mulredc1.s

make[4]: *** [all-recursive] Error 1

make[3]: *** [all] Error 2

Error building GMP-ECM.


real 0m20.742s

user 0m8.886s

sys 0m8.923s



Error installing package ecm-6.4.4



Please email sage-devel (http://groups.google.com/group/sage-devel)

explaining the problem and including the relevant part of the log file

  /Users/J_Honrubia/Sage/sage-6.10/sage/logs/pkgs/ecm-6.4.4.log

Describe your computer, operating system, etc.

If you want to try to fix the problem yourself, *don't* just cd to

/Users/J_Honrubia/Sage/sage-6.10/sage/local/var/tmp/sage/build/ecm-6.4.4 
and type 'make' or whatever is appropriate.

Instead, the following commands setup all environment variables

correctly and load a subshell for you to debug the error:

  (cd 
'/Users/J_Honrubia/Sage/sage-6.10/sage/local/var/tmp/sage/build/ecm-6.4.4' 
&& '/Users/J_Honrubia/Sage/sage-6.10/sage/sage' --sh)

When you are done debugging, you can type "exit" to leave the subshell.



make[2]: *** 
[/Users/J_Honrubia/Sage/sage-6.10/sage/local/var/lib/sage/installed/ecm-6.4.4] 
Error 1

make[1]: *** [all] Error 2


real 0m22.540s

user 0m9.866s

sys 0m9.371s

***

Error building Sage.


The following package(s) may have failed to build:


package: ecm-6.4.4

log file: /Users/J_Honrubia/Sage/sage-6.10/sage/logs/pkgs/ecm-6.4.4.log

build directory: 
/Users/J_Honrubia/Sage/sage-6.10/sage/local/var/tmp/sage/build/ecm-6.4.4


The build directory may contain configuration files and other potentially

helpful information. WARNING: if you now run 'make' again, the build

directory will, by default, be deleted. Set the environment variable

SAGE_KEEP_BUILT_SPKGS to 'yes' to prevent this.


make: *** [all] Error 1



El jueves, 4 de febrero de 2016, 17:36:46 (UTC+1), Dima Pasechnik escribió:
>
> did the internet connection from the machine die during the build, or 
> perhaps you are behind some big bad firewall?
>
> On Thursday, 4 February 2016 15:21:59 UTC, jhonrubia6 wrote:
>>
>> ... and the new error  (on make distclean && make) is 
>>
>> /Users/J_Honrubia/Sage/sage-6.10/sage/build/pipestatus "sage-spkg -f 
>> setuptools-12.4 2>&1" "tee -a 
>> /Users/J_Honrubia/Sage/sage-6.10/sage/logs/pkgs/setuptools-12.4.log"
>>
>> /Users/J_Honrubia/Sage/sage-6.10/sage/src/bin/sage-env: line 434: 
>> /Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/R/share/Makevars.site: No 
>> such file or directory
>>
>> Found local metadata for setuptools-12.4
>>
>> Attempting to download package setuptools-12.4.tar.gz from mirrors
>>
>> Downloading the Sage mirror list
>>
>> Traceback (most recent call last):
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/src/bin/sage-download-file", line 
>> 457, in 
>>
>> tarball.download()
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/src/bin/sage-download-file", line 
>> 392, in download
>>
>> for mirror in MirrorList():
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/src/bin/sage-download-file", line 
>> 152, in __init__
>>
>> with contextlib.closing(urllib.urlopen(self.URL)) as f:
>>
>>   File 
>> "/Users/J_Honrubia/Sage/sage-6.10/sage/local/lib/python/urllib.py", line 
>> 87, in urlopen
>>
>> return opener.open(url)
>>
>>   Fi

[sage-devel] Re: error rebuilding sage

[jhonrubia6]

I'm sorry, it's a typo when writing this message.
Anyway, I tried again, and now it's compiling ok. I do not really know why. 

El miércoles, 3 de febrero de 2016, 18:25:46 (UTC+1), jhonrubia6 escribió:
>
> after make dist-clean && make I've got an error compiling atlas-3.10.2. 
> Any ideas, other than re-cloning the sources?
>
> Setting up build directory for atlas-3.10.2
>
> Finished set up
>
> 
>
> Host system:
>
> Darwin OnoSendaiII.local 15.3.0 Darwin Kernel Version 15.3.0: Thu Dec 10 
> 18:40:58 PST 2015; root:xnu-3248.30.4~1/RELEASE_X86_64 x86_64
>
> 
>
> C compiler: gcc
>
> C compiler version:
>
> Configured with: --prefix=/Library/Developer/CommandLineTools/usr 
> --with-gxx-include-dir=/usr/include/c++/4.2.1
>
> Apple LLVM version 7.0.2 (clang-700.1.81)
>
> Target: x86_64-apple-darwin15.3.0
>
> Thread model: posix
>
> 
>
> Cannot execute fortran compiler ($FC)!
>
>
> real0m0.071s
>
> user0m0.041s
>
> sys 0m0.026s
>
> 
>
> Error installing package atlas-3.10.2
>
> 
>
> Please email sage-devel (http://groups.google.com/group/sage-devel)
>
> explaining the problem and including the relevant part of the log file
>
>   /Users/J_Honrubia/Sage/sage-6.10/sage/logs/pkgs/atlas-3.10.2.log
>
> Describe your computer, operating system, etc.
>
> If you want to try to fix the problem yourself, *don't* just cd to
>
> /Users/J_Honrubia/Sage/sage-6.10/sage/local/var/tmp/sage/build/atlas-3.10.2 
> and type 'make' or whatever is appropriate.
>
> Instead, the following commands setup all environment variables
>
> correctly and load a subshell for you to debug the error:
>
>   (cd 
> '/Users/J_Honrubia/Sage/sage-6.10/sage/local/var/tmp/sage/build/atlas-3.10.2' 
> && '/Users/J_Honrubia/Sage/sage-6.10/sage/sage' --sh)
>
> When you are done debugging, you can type "exit" to leave the subshell.
>
> 
>
> make[1]: *** 
> [/Users/J_Honrubia/Sage/sage-6.10/sage/local/var/lib/sage/installed/atlas-3.10.2]
>  
> Error 1
>
>
> real6m27.702s
>
> user4m16.457s
>
> sys 1m55.716s
>
> ***
>
> Error building Sage.
>
>
> The following package(s) may have failed to build:
>
>
> package: atlas-3.10.2
>
> log file: /Users/J_Honrubia/Sage/sage-6.10/sage/logs/pkgs/atlas-3.10.2.log
>
> build directory: 
> /Users/J_Honrubia/Sage/sage-6.10/sage/local/var/tmp/sage/build/atlas-3.10.2
>
>

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[sage-devel] error rebuilding sage

[jhonrubia6]

after make dist-clean && make I've got an error compiling atlas-3.10.2. Any 
ideas, other than re-cloning the sources?

Setting up build directory for atlas-3.10.2

Finished set up



Host system:

Darwin OnoSendaiII.local 15.3.0 Darwin Kernel Version 15.3.0: Thu Dec 10 
18:40:58 PST 2015; root:xnu-3248.30.4~1/RELEASE_X86_64 x86_64



C compiler: gcc

C compiler version:

Configured with: --prefix=/Library/Developer/CommandLineTools/usr 
--with-gxx-include-dir=/usr/include/c++/4.2.1

Apple LLVM version 7.0.2 (clang-700.1.81)

Target: x86_64-apple-darwin15.3.0

Thread model: posix



Cannot execute fortran compiler ($FC)!


real0m0.071s

user0m0.041s

sys 0m0.026s



Error installing package atlas-3.10.2



Please email sage-devel (http://groups.google.com/group/sage-devel)

explaining the problem and including the relevant part of the log file

  /Users/J_Honrubia/Sage/sage-6.10/sage/logs/pkgs/atlas-3.10.2.log

Describe your computer, operating system, etc.

If you want to try to fix the problem yourself, *don't* just cd to

/Users/J_Honrubia/Sage/sage-6.10/sage/local/var/tmp/sage/build/atlas-3.10.2 
and type 'make' or whatever is appropriate.

Instead, the following commands setup all environment variables

correctly and load a subshell for you to debug the error:

  (cd 
'/Users/J_Honrubia/Sage/sage-6.10/sage/local/var/tmp/sage/build/atlas-3.10.2' 
&& '/Users/J_Honrubia/Sage/sage-6.10/sage/sage' --sh)

When you are done debugging, you can type "exit" to leave the subshell.



make[1]: *** 
[/Users/J_Honrubia/Sage/sage-6.10/sage/local/var/lib/sage/installed/atlas-3.10.2]
 
Error 1


real6m27.702s

user4m16.457s

sys 1m55.716s

***

Error building Sage.


The following package(s) may have failed to build:


package: atlas-3.10.2

log file: /Users/J_Honrubia/Sage/sage-6.10/sage/logs/pkgs/atlas-3.10.2.log

build directory: 
/Users/J_Honrubia/Sage/sage-6.10/sage/local/var/tmp/sage/build/atlas-3.10.2

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[sage-devel] Re: Plots in plot.py documentation

[jhonrubia6]

work done.
 changed status to needs review.

El jueves, 21 de enero de 2016, 20:45:31 (UTC+1), jhonrubia6 escribió:
>
> Does it makes sense to you if I modify the plot.py docstrings in order to 
> include PLOT:: blocks? Wouldn't it be more clear for newbies? (well it wold 
> have helped me anyway)
> Has it been discussed?
> Javier
>

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Re: [sage-devel] Plots in plot.py documentation

[jhonrubia6]

There is a long discussion on this 
here http://trac.sagemath.org/ticket/17498 the original ticket which 
created the ::PLOT/sphinx_plot possibility.

El lunes, 25 de enero de 2016, 21:24:58 (UTC+1), Jeroen Demeyer escribió:
>
> I'm sure there is probably a good reason, but why don't we just display 
> all plots in the documentation? 
>

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[sage-devel] Re: Plots in plot.py documentation

[jhonrubia6]

Hi,
new two problems.
1) GraphicsArray does not have a plot() method, so I added one in my local 
copy and everything went ok on examples like 
show(graphics_array([g1, g2], 2, 1), xmin=0)

Is it ok to include the patch in this ticket or should I open a new one?
2) I cannot find a way to emulate 
g.show(ticks=pi/6, tick_formatter=pi)
I tried with
g._matplotlib_tick_formatter(subplot,ticks=(pi,None), tick_formatter=(pi,
None),xmax=10,xmin=0,ymax=10,ymin=0)
sphinx_plot(g)
but it does not render the pi symbol on the x axis
Any ideas on this?

(I move on meanwhile)



El jueves, 21 de enero de 2016, 20:45:31 (UTC+1), jhonrubia6 escribió:
>
> Does it makes sense to you if I modify the plot.py docstrings in order to 
> include PLOT:: blocks? Wouldn't it be more clear for newbies? (well it wold 
> have helped me anyway)
> Has it been discussed?
> Javier
>

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[sage-devel] Re: Getting Started

[jhonrubia6]

As I see no other answers I volunteer mine. As a newbie myself in the 
developers community (two year user only) I began with tickets on 
documentation and graphics since it seemed to me the easiest way to get 
used to the development cycle and the inners of Sage programming slowly. 
You can either search trac to find a need_work ticket which appeals to you 
as doable or open your own trac ticket on a bug if you happened to have 
found one. If you think of an enhacement it is better to ask the community 
on this forum for it may be implemented in some already written module.
Hope it helps, and welcome.

El martes, 19 de enero de 2016, 14:52:35 (UTC+1), Siddhartha Gairola 
escribió:
>
> Dear Developers,
>
> I am a newbie and would like to get started.
> I am in my sophomore year at college and i know c,c++,python,html,css and 
> javascript.
>
> I would be highly grateful if i could get some assistance with this.
>
> Thanking you.
>
> Regards,
> Siddhartha
>

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[sage-devel] Re: Plots in plot.py documentation

[jhonrubia6]

forget it. It has some problems with list comprehension with real numbers 
(e.g. sum(circle((i,0), i, hue=sin(i/10)) for i in [10,9.9,..,0]) ) but I 
can work around it with more code.

El lunes, 25 de enero de 2016, 20:19:46 (UTC+1), jhonrubia6 escribió:
>
> It seems that the option *hue* does not work properly inside the PLOT 
> block rendering one-color plots, so the graphics do not correspond to the 
> code, I think it's better in this case to not show them, as it would be 
> misleading.
> What do you think?
>
> El domingo, 24 de enero de 2016, 19:51:34 (UTC+1), jhonrubia6 escribió:
>>
>> Ok. http://trac.sagemath.org/19953 created, working on it.
>>
>> El jueves, 21 de enero de 2016, 20:45:31 (UTC+1), jhonrubia6 escribió:
>>>
>>> Does it makes sense to you if I modify the plot.py docstrings in order 
>>> to include PLOT:: blocks? Wouldn't it be more clear for newbies? (well it 
>>> wold have helped me anyway)
>>> Has it been discussed?
>>> Javier
>>>
>>

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[sage-devel] Re: Plots in plot.py documentation

[jhonrubia6]

It seems that the option *hue* does not work properly inside the PLOT block 
rendering one-color plots, so the graphics do not correspond to the code, I 
think it's better in this case to not show them, as it would be misleading.
What do you think?

El domingo, 24 de enero de 2016, 19:51:34 (UTC+1), jhonrubia6 escribió:
>
> Ok. http://trac.sagemath.org/19953 created, working on it.
>
> El jueves, 21 de enero de 2016, 20:45:31 (UTC+1), jhonrubia6 escribió:
>>
>> Does it makes sense to you if I modify the plot.py docstrings in order to 
>> include PLOT:: blocks? Wouldn't it be more clear for newbies? (well it wold 
>> have helped me anyway)
>> Has it been discussed?
>> Javier
>>
>

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[sage-devel] Re: Plots in plot.py documentation

[jhonrubia6]

Ok. http://trac.sagemath.org/19953 created, working on it.

El jueves, 21 de enero de 2016, 20:45:31 (UTC+1), jhonrubia6 escribió:
>
> Does it makes sense to you if I modify the plot.py docstrings in order to 
> include PLOT:: blocks? Wouldn't it be more clear for newbies? (well it wold 
> have helped me anyway)
> Has it been discussed?
> Javier
>

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[sage-devel] Plots in plot.py documentation

[jhonrubia6]

Does it makes sense to you if I modify the plot.py docstrings in order to 
include PLOT:: blocks? Wouldn't it be more clear for newbies? (well it wold 
have helped me anyway)
Has it been discussed?
Javier

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[sage-devel] Re: error modifying branch in trac (ticket#19856)

[jhonrubia6]

Thank you for all your answers.
I had not completely understood the development cicle (as a newbie with 
git). I had commited changes on my local copy and, without having pushed 
the changes (thanks Vincent) to the remote server, I expected to see 
(magically) the branch on green color.
I apologize for the naive questions, I hope I have a better gripo of the 
procedure now. :-)
Javier

El jueves, 14 de enero de 2016, 21:23:10 (UTC+1), jhonrubia6 escribió:
>
> I just made the error of committing changes on my local branch 
> t/19856/new_plot_function_hyperbolic_regular_polygon__ 
> before updating the branch field on the ticket #19856 in trac.sagemath so 
> now, it appears a "branch does not exist"  message in trac.sagemath 
> Is there a way to find the branch after the commit? and to manually update 
> it on trac.sagemath?
> thanks in advance
>

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[sage-devel] error modifying branch in trac (ticket#19856)

[jhonrubia6]

I just made the error of committing changes on my local branch 
t/19856/new_plot_function_hyperbolic_regular_polygon__ 
before updating the branch field on the ticket #19856 in trac.sagemath so 
now, it appears a "branch does not exist"  message in trac.sagemath 
Is there a way to find the branch after the commit? and to manually update 
it on trac.sagemath?
thanks in advance

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[sage-devel] Re: Error building branch from git clone

[jhonrubia6]

I recently had a similar problem. Try to 'make' it again, probably some of 
the code you just wrote depends on parts of the code which have been 
modified after your clone was made. In my case it worked after re-making 
it. Minor changes in my code afterwards only needed ./sage -b (if you 
touched the comments you should rebuild also the documentation)

El jueves, 14 de enero de 2016, 21:18:03 (UTC+1), Anna Haensch escribió:
>
> Hello, not sure if I should be posting this here or sage-support, but I'm 
> having difficulty building a local sage branch.  I'm working from a clone 
> build from the sage git repository and I just created a branch from an 
> existing ticket on sagetrac.  If I want to boot up sage and actually use 
> the edits in that local branch, I'm pretty sure I need to rebuild sage 
> first, from within that branch.  So, per the instructions on the Sage 
> Developer's Guide I ran:
>
> sage$ ./sage -br
>
> but it keeps getting hung up on the following error message, and now I 
> can't even run sage anymore. 
>
> /Users/annahaensch/sage/src/build/cythonized/sage/symbolic/expression.cpp:73454:1:
>  
>   required from here
>
> /Users/annahaensch/sage/local/include/pynac/container.h:587:52: error: 
> 'subschildren' was not declared in this scope
>
>   std::unique_ptr vp = subschildren(m, options);
>
> ^
>
> Any ideas?  Thanks in advance.
>
> -Anna
>

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[sage-devel] Re: Build failure OS X (10.11 El capitan) sage-6.10

[jhonrubia6]

Hi,
I did a github clone and worked fine. Maybe something wrong in the tarball, 
I do not know. I will clone from now on, always learning new things :-) 
thanks a lot both of you
Javier

El miércoles, 6 de enero de 2016, 22:13:16 (UTC+1), Dima Pasechnik escribió:
>
> On Wednesday, 6 January 2016 20:50:10 UTC, Volker Braun wrote:
>>
>> There is a src/sage/combinat/matrices/dancing_links_c.h header in the 
>> repository, if you don't have that file then something went wrong when 
>> unpacking. See e.g.:
>>
> or perhaps with downloading the tarball?
>
> Did you check the md5sum of the tarball? (it's listed on download pages).
>
> Anyway, nowadays I'd rather use git to clone from the github repo
> https://github.com/sagemath/sage
>
>

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[sage-devel] Build failure OS X (10.11 El capitan) sage-6.10

[jhonrubia6]

Hi,
I just upgraded my OS X version, downloaded source code sage-6.10, and the 
command line tools,  and try to build the source code having the following 
errors

/Users/J_Honrubia/sage/sage-6.10/src/build/cythonized/sage/combinat/matrices/dancing_links.cpp:293:29:
 
fatal error: dancing_links_c.h: No such file or directory

/Users/J_Honrubia/sage/sage-6.10/src/build/cythonized/sage/combinat/partitions.cpp:299:26:
 
fatal error: partitions_c.h: No such file or directory

Any clue?


kind regards

Javier

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[sage-devel] Re: Build failure OS X (10.11 El capitan) sage-6.10

[jhonrubia6]

Hi,
in which one (I only see install.log)? It is true that no 
 dancing_links_c.h in the directory, so the error makes sense. I am going 
to try once more, maybe there is some software prerequisite that I did not 
pay attention to (other than having command line tools installed)
I will report again when finished
kind regards.

El martes, 5 de enero de 2016, 17:27:23 (UTC+1), Volker Braun escribió:
>
> The original error is proabably higher up in your log
>
> On Tuesday, January 5, 2016 at 4:27:09 PM UTC+1, jhonrubia6 wrote:
>>
>> Hi,
>> I just upgraded my OS X version, downloaded source code sage-6.10, and 
>> the command line tools,  and try to build the source code having the 
>> following errors
>>
>> /Users/J_Honrubia/sage/sage-6.10/src/build/cythonized/sage/combinat/matrices/dancing_links.cpp:293:29:
>>  
>> fatal error: dancing_links_c.h: No such file or directory
>>
>> /Users/J_Honrubia/sage/sage-6.10/src/build/cythonized/sage/combinat/partitions.cpp:299:26:
>>  
>> fatal error: partitions_c.h: No such file or directory
>>
>> Any clue?
>>
>>
>> kind regards
>>
>> Javier
>>
>

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[sage-devel] Re: error building sage

[jhonrubia6]

Hi. 
Everything worked fine after the second 'make'. now version is 7.0.beta1
thank you all

El viernes, 25 de diciembre de 2015, 20:37:07 (UTC+1), jhonrubia6 escribió:
>
> Hi,
> this is the first time I try to contribute. I began making a single change 
> in the comments, here is the diff
> MacBook-de-Javier:sage-6.10 t143730$ git diff
> diff --git a/src/sage/plot/hyperbolic_arc.py 
> b/src/sage/plot/hyperbolic_arc.py
> index 5b1ac5d..17f88f5 100644
> --- a/src/sage/plot/hyperbolic_arc.py
> +++ b/src/sage/plot/hyperbolic_arc.py
> @@ -8,6 +8,7 @@ AUTHORS:
>
>  
> #*
>  #   Copyright (C) 2011 Hartmut Monien <mon...@th.physik.uni-bonn.de>,
>  # 2015 Stefan Kraemer <skrae...@th.physik.uni-bonn.de
> >
> +# 2016 Javier Honrubia <jhonrub...@uned.es>
>  #
>  #  Distributed under the terms of the GNU General Public License (GPL)
>  #
>
> then I used ./sage -br as instructed to rebuild my local copy of sage and 
> got 1 error where there should be none . Could somebody give me a clue on 
> this?
>
> Executing 146 commands (using 1 thread)
> [  1/146] gcc -fno-strict-aliasing 
> -I/Users/t143730/Applications/sage-6.10/local/var/tmp/sage/build/python2-2.7.10.p0/include
>  
> -DNDEBUG -g -fwrapv -O3 -Wall 
> -I/Users/t143730/Applications/sage-6.10/local/include 
> -I/Users/t143730/Applications/sage-6.10/local/include/python2.7 
> -I/Users/t143730/Applications/sage-6.10/local/lib/python2.7/site-packages/numpy/core/include
>  
> -I/Users/t143730/Applications/sage-6.10/src 
> -I/Users/t143730/Applications/sage-6.10/src/sage/ext 
> -I/Users/t143730/Applications/sage-6.10/src/build/cythonized 
> -I/Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/ext 
> -I/Users/t143730/Applications/sage-6.10/local/include/python2.7 -c 
> /Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.cpp
>  
> -o 
> build/temp.macosx-10.7-x86_64-2.7/Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.o
>  
> -DFPLLL_V3_COMPAT -fno-strict-aliasing -w
> /Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.cpp:
>  
> In function 'PyObject* 
> __pyx_pf_4sage_4libs_5fplll_5fplll_6FP_LLL_10BKZ(__pyx_obj_4sage_4libs_5fplll_5fplll_FP_LLL*,
>  
> int, double, PyObject*, int, int, int, PyObject*, PyObject*, PyObject*, 
> PyObject*)':
> /Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.cpp:5020:165:
>  
> error: no matching function for call to 
> 'bkzReduction(fplll::ZZ_mat<__mpz_struct [1]>*&, NULL, fplll::BKZParam&, 
> fplll::FloatType, int&)'
>__pyx_v_r = fplll::bkzReduction(__pyx_v_self->_lattice, NULL, 
> __pyx_v_o, 
> __pyx_f_4sage_4libs_5fplll_5fplll_check_float_type(__pyx_v_float_type), 
> __pyx_v_precision);
>   
> 
>^
>
>

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[sage-devel] Re: error building sage

[jhonrubia6]

Hi,
I downloaded sage 6.10 source code, "make" it without problems (run sage 
ok), checked out a branch for a ticket I just opened. modified the 
/src/sage/plot/hyperbolic_arc.py adding only a comment with my name, and 
just for check I understood the procedure as describer in the web, I did 
sage -br getting the error I showed before. All during the same two days 
interval. Tried sage -ba unsuccessfully I'm trying 'make' again. I will 
return the result when it finishes. Is there a thumb rule as to when it is 
mandatory to go through 'make' all the source or when simple sage -b will 
suffice?


El viernes, 25 de diciembre de 2015, 20:37:07 (UTC+1), jhonrubia6 escribió:
>
> Hi,
> this is the first time I try to contribute. I began making a single change 
> in the comments, here is the diff
> MacBook-de-Javier:sage-6.10 t143730$ git diff
> diff --git a/src/sage/plot/hyperbolic_arc.py 
> b/src/sage/plot/hyperbolic_arc.py
> index 5b1ac5d..17f88f5 100644
> --- a/src/sage/plot/hyperbolic_arc.py
> +++ b/src/sage/plot/hyperbolic_arc.py
> @@ -8,6 +8,7 @@ AUTHORS:
>
>  
> #*
>  #   Copyright (C) 2011 Hartmut Monien <mon...@th.physik.uni-bonn.de>,
>  # 2015 Stefan Kraemer <skrae...@th.physik.uni-bonn.de
> >
> +# 2016 Javier Honrubia <jhonrub...@uned.es>
>  #
>  #  Distributed under the terms of the GNU General Public License (GPL)
>  #
>
> then I used ./sage -br as instructed to rebuild my local copy of sage and 
> got 1 error where there should be none . Could somebody give me a clue on 
> this?
>
> Executing 146 commands (using 1 thread)
> [  1/146] gcc -fno-strict-aliasing 
> -I/Users/t143730/Applications/sage-6.10/local/var/tmp/sage/build/python2-2.7.10.p0/include
>  
> -DNDEBUG -g -fwrapv -O3 -Wall 
> -I/Users/t143730/Applications/sage-6.10/local/include 
> -I/Users/t143730/Applications/sage-6.10/local/include/python2.7 
> -I/Users/t143730/Applications/sage-6.10/local/lib/python2.7/site-packages/numpy/core/include
>  
> -I/Users/t143730/Applications/sage-6.10/src 
> -I/Users/t143730/Applications/sage-6.10/src/sage/ext 
> -I/Users/t143730/Applications/sage-6.10/src/build/cythonized 
> -I/Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/ext 
> -I/Users/t143730/Applications/sage-6.10/local/include/python2.7 -c 
> /Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.cpp
>  
> -o 
> build/temp.macosx-10.7-x86_64-2.7/Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.o
>  
> -DFPLLL_V3_COMPAT -fno-strict-aliasing -w
> /Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.cpp:
>  
> In function 'PyObject* 
> __pyx_pf_4sage_4libs_5fplll_5fplll_6FP_LLL_10BKZ(__pyx_obj_4sage_4libs_5fplll_5fplll_FP_LLL*,
>  
> int, double, PyObject*, int, int, int, PyObject*, PyObject*, PyObject*, 
> PyObject*)':
> /Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.cpp:5020:165:
>  
> error: no matching function for call to 
> 'bkzReduction(fplll::ZZ_mat<__mpz_struct [1]>*&, NULL, fplll::BKZParam&, 
> fplll::FloatType, int&)'
>__pyx_v_r = fplll::bkzReduction(__pyx_v_self->_lattice, NULL, 
> __pyx_v_o, 
> __pyx_f_4sage_4libs_5fplll_5fplll_check_float_type(__pyx_v_float_type), 
> __pyx_v_precision);
>   
> 
>^
>
>

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[sage-devel] error building sage

[jhonrubia6]

Hi,
this is the first time I try to contribute. I began making a single change 
in the comments, here is the diff
MacBook-de-Javier:sage-6.10 t143730$ git diff
diff --git a/src/sage/plot/hyperbolic_arc.py 
b/src/sage/plot/hyperbolic_arc.py
index 5b1ac5d..17f88f5 100644
--- a/src/sage/plot/hyperbolic_arc.py
+++ b/src/sage/plot/hyperbolic_arc.py
@@ -8,6 +8,7 @@ AUTHORS:
 #*
 #   Copyright (C) 2011 Hartmut Monien ,
 # 2015 Stefan Kraemer 
+# 2016 Javier Honrubia 
 #
 #  Distributed under the terms of the GNU General Public License (GPL)
 #

then I used ./sage -br as instructed to rebuild my local copy of sage and 
got 1 error where there should be none . Could somebody give me a clue on 
this?

Executing 146 commands (using 1 thread)
[  1/146] gcc -fno-strict-aliasing 
-I/Users/t143730/Applications/sage-6.10/local/var/tmp/sage/build/python2-2.7.10.p0/include
 
-DNDEBUG -g -fwrapv -O3 -Wall 
-I/Users/t143730/Applications/sage-6.10/local/include 
-I/Users/t143730/Applications/sage-6.10/local/include/python2.7 
-I/Users/t143730/Applications/sage-6.10/local/lib/python2.7/site-packages/numpy/core/include
 
-I/Users/t143730/Applications/sage-6.10/src 
-I/Users/t143730/Applications/sage-6.10/src/sage/ext 
-I/Users/t143730/Applications/sage-6.10/src/build/cythonized 
-I/Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/ext 
-I/Users/t143730/Applications/sage-6.10/local/include/python2.7 -c 
/Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.cpp
 
-o 
build/temp.macosx-10.7-x86_64-2.7/Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.o
 
-DFPLLL_V3_COMPAT -fno-strict-aliasing -w
/Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.cpp:
 
In function 'PyObject* 
__pyx_pf_4sage_4libs_5fplll_5fplll_6FP_LLL_10BKZ(__pyx_obj_4sage_4libs_5fplll_5fplll_FP_LLL*,
 
int, double, PyObject*, int, int, int, PyObject*, PyObject*, PyObject*, 
PyObject*)':
/Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.cpp:5020:165:
 
error: no matching function for call to 
'bkzReduction(fplll::ZZ_mat<__mpz_struct [1]>*&, NULL, fplll::BKZParam&, 
fplll::FloatType, int&)'
   __pyx_v_r = fplll::bkzReduction(__pyx_v_self->_lattice, NULL, __pyx_v_o, 
__pyx_f_4sage_4libs_5fplll_5fplll_check_float_type(__pyx_v_float_type), 
__pyx_v_precision);


 ^

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[sage-devel] Re: error building sage

[jhonrubia6]

I did as you suggested (./sage -ba). Same result
/Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.cpp:5020:165:
 
error: no matching function for call to 
'bkzReduction(fplll::ZZ_mat<__mpz_struct [1]>*&, NULL, fplll::BKZParam&, 
fplll::FloatType, int&)'
   __pyx_v_r = fplll::bkzReduction(__pyx_v_self->_lattice, NULL, __pyx_v_o, 
__pyx_f_4sage_4libs_5fplll_5fplll_check_float_type(__pyx_v_float_type), 
__pyx_v_precision);


 ^

El viernes, 25 de diciembre de 2015, 20:37:07 (UTC+1), jhonrubia6 escribió:
>
> Hi,
> this is the first time I try to contribute. I began making a single change 
> in the comments, here is the diff
> MacBook-de-Javier:sage-6.10 t143730$ git diff
> diff --git a/src/sage/plot/hyperbolic_arc.py 
> b/src/sage/plot/hyperbolic_arc.py
> index 5b1ac5d..17f88f5 100644
> --- a/src/sage/plot/hyperbolic_arc.py
> +++ b/src/sage/plot/hyperbolic_arc.py
> @@ -8,6 +8,7 @@ AUTHORS:
>
>  
> #*
>  #   Copyright (C) 2011 Hartmut Monien <mon...@th.physik.uni-bonn.de>,
>  # 2015 Stefan Kraemer <skrae...@th.physik.uni-bonn.de
> >
> +# 2016 Javier Honrubia <jhonrub...@uned.es>
>  #
>  #  Distributed under the terms of the GNU General Public License (GPL)
>  #
>
> then I used ./sage -br as instructed to rebuild my local copy of sage and 
> got 1 error where there should be none . Could somebody give me a clue on 
> this?
>
> Executing 146 commands (using 1 thread)
> [  1/146] gcc -fno-strict-aliasing 
> -I/Users/t143730/Applications/sage-6.10/local/var/tmp/sage/build/python2-2.7.10.p0/include
>  
> -DNDEBUG -g -fwrapv -O3 -Wall 
> -I/Users/t143730/Applications/sage-6.10/local/include 
> -I/Users/t143730/Applications/sage-6.10/local/include/python2.7 
> -I/Users/t143730/Applications/sage-6.10/local/lib/python2.7/site-packages/numpy/core/include
>  
> -I/Users/t143730/Applications/sage-6.10/src 
> -I/Users/t143730/Applications/sage-6.10/src/sage/ext 
> -I/Users/t143730/Applications/sage-6.10/src/build/cythonized 
> -I/Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/ext 
> -I/Users/t143730/Applications/sage-6.10/local/include/python2.7 -c 
> /Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.cpp
>  
> -o 
> build/temp.macosx-10.7-x86_64-2.7/Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.o
>  
> -DFPLLL_V3_COMPAT -fno-strict-aliasing -w
> /Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.cpp:
>  
> In function 'PyObject* 
> __pyx_pf_4sage_4libs_5fplll_5fplll_6FP_LLL_10BKZ(__pyx_obj_4sage_4libs_5fplll_5fplll_FP_LLL*,
>  
> int, double, PyObject*, int, int, int, PyObject*, PyObject*, PyObject*, 
> PyObject*)':
> /Users/t143730/Applications/sage-6.10/src/build/cythonized/sage/libs/fplll/fplll.cpp:5020:165:
>  
> error: no matching function for call to 
> 'bkzReduction(fplll::ZZ_mat<__mpz_struct [1]>*&, NULL, fplll::BKZParam&, 
> fplll::FloatType, int&)'
>__pyx_v_r = fplll::bkzReduction(__pyx_v_self->_lattice, NULL, 
> __pyx_v_o, 
> __pyx_f_4sage_4libs_5fplll_5fplll_check_float_type(__pyx_v_float_type), 
> __pyx_v_precision);
>   
> 
>^
>
>

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[sage-devel] how to publish new quickref card in spanish

[jhonrubia6]

Hi,
I translated the quickref card to spanish, but I can not log in Wiki Sage 
in order to publish the card, since my new trac account does not sync with 
Wiki. 
Can I mail to it somebdoy or publish it here so some of you that have a 
workable wiki account can publish it?
regards
Javier

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Re: [sage-devel] Trac vs Wiki passwords

[jhonrubia6]

So for new trac-accounts, there is no way to get a wiki account in order to 
migrate quickref cards to other languages for example?

El miércoles, 26 de agosto de 2015, 5:35:39 (UTC+2), R. Andrew Ohana 
escribió:
>
>
>
> On Mon, Aug 24, 2015 at 6:25 AM, kcrisman  wrote:
>
>>
 trac and wiki accounts used to be linked (same username, same 
 password). I
 changed my password on trac and it worked, but i can not use it on the
 wiki. Unfortunately, i am travelling and i do not have access to my
 previous password. How are the two system currently related ?

>>>
>>> Not at all. You can't currently change your wiki password. Basically 
>>> through a series of hacks, we had hooked the wiki's authentication up to 
>>> trac, but I think that broke when the wiki was moved off of boxen last 
>>> summer.
>>>
>>>
>> Oh, was that heavily advertised?  I think we probably still have quite a 
>> bit of documentation that says both have the same password...
>>
>
> It was probably an oversight. I only realized that this was the case 
> within the last week or so.
>  
>
>>
>>  
>>
>>> On a slight tangent: I personally don't care for our current wiki, 
>>> MediaWiki -- it has caused us numerous issues over the years (e.g. memory 
>>> hog on boxen), and is a bit of a pain to administer. I'm not really aware 
>>> of any modern wiki platforms (other than gollum, which didn't handle large 
>>> wikis like ours when I checked it out 1.5 years ago), but if anyone has any 
>>> thoughts on the matter I would be happy to discuss it (maybe in a different 
>>> thread).
>>>
>>
>> I don't know that moving all that content/links would be worth the 
>> effort. 
>>
>
> We could setup a redirect, or apply a regex during such a transition, so 
> changing links is not really an issue. Moving content is worthwhile if it 
> is a noticeable reduction in maintenance. 
>
>> -- 
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>>
>
>
>
> -- 
> Andrew
>

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