[sage-devel] Re: Doctest for a minor bugfix?

2009-10-12 Thread Kwankyu

Hi Minh,

I still have a problem on this issue.

1. TESTS: section is not documented in the developer manual as of
Sage 4.1.1
2. Examples in TESTS: section are still included in the Sage
reference manual. If they are intended for test purpose only, then
they should not be included in the reference manual, which is for the
users.

Do I misunderstand something?


Kwankyu
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[sage-devel] Re: Doctest for a minor bugfix?

2009-10-12 Thread William Stein

On Mon, Oct 12, 2009 at 4:45 PM, Kwankyu ekwan...@gmail.com wrote:

 Hi Minh,

 I still have a problem on this issue.

 1. TESTS: section is not documented in the developer manual as of
 Sage 4.1.1
 2. Examples in TESTS: section are still included in the Sage
 reference manual. If they are intended for test purpose only, then
 they should not be included in the reference manual, which is for the
 users.

 Do I misunderstand something?

No, we just have not got around to actually implementing 2 yet.  Want to help?

William

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[sage-devel] Re: Doctest for a minor bugfix?

2009-10-12 Thread Minh Nguyen

Hi Kwankyu,

On Tue, Oct 13, 2009 at 10:45 AM, Kwankyu ekwan...@gmail.com wrote:

SNIP

 Do I misunderstand something?

The section TESTS: is not documented in the Developers' Guide
because no one so far has written a patch to update the Guide. Patches
welcome :-)  However, note that the section Reviewing Patches [1]
has this dot point:

{{{
In particular, is there a doctest illustrating that the bug has been
fixed? If a function used to give the wrong answer and this patch
fixes that, then if possible, it should include a doctest illustrating
its new success.
}}}

[1] http://www.sagemath.org/doc/developer/trac.html#reviewing-patches

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Regards
Minh Van Nguyen

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[sage-devel] Re: Doctest for a minor bugfix?

2009-10-12 Thread John H Palmieri

On Oct 12, 5:08 pm, William Stein wst...@gmail.com wrote:
 On Mon, Oct 12, 2009 at 4:45 PM, Kwankyu ekwan...@gmail.com wrote:

  Hi Minh,

  I still have a problem on this issue.

  1. TESTS: section is not documented in the developer manual as of
  Sage 4.1.1
  2. Examples in TESTS: section are still included in the Sage
  reference manual. If they are intended for test purpose only, then
  they should not be included in the reference manual, which is for the
  users.

  Do I misunderstand something?

 No, we just have not got around to actually implementing 2 yet.  Want to help?

I would point out that in the code, some examples in the TESTS section
can be quite helpful to users.  So if someone wants to implement 2,
they had better check whether each such example is worth including in
the reference manual (and so should be moved to the EXAMPLES block) or
not.  Including too many examples is better than including too few.

  John

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[sage-devel] Re: Doctest for a minor bugfix?

2009-10-12 Thread Kwankyu



On Oct 13, 9:08 am, William Stein wst...@gmail.com wrote:
 On Mon, Oct 12, 2009 at 4:45 PM, Kwankyu ekwan...@gmail.com wrote:

  Hi Minh,

  I still have a problem on this issue.

  1. TESTS: section is not documented in the developer manual as of
  Sage 4.1.1
  2. Examples in TESTS: section are still included in the Sage
  reference manual. If they are intended for test purpose only, then
  they should not be included in the reference manual, which is for the
  users.

  Do I misunderstand something?

 No, we just have not got around to actually implementing 2 yet.  

I see.

 Want to help?

Not now.


Kwankyu


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[sage-devel] Re: Doctest for a minor bugfix?

2009-10-12 Thread William Stein

On Mon, Oct 12, 2009 at 6:24 PM, John H Palmieri jhpalmier...@gmail.com wrote:

 On Oct 12, 5:08 pm, William Stein wst...@gmail.com wrote:
 On Mon, Oct 12, 2009 at 4:45 PM, Kwankyu ekwan...@gmail.com wrote:

  Hi Minh,

  I still have a problem on this issue.

  1. TESTS: section is not documented in the developer manual as of
  Sage 4.1.1
  2. Examples in TESTS: section are still included in the Sage
  reference manual. If they are intended for test purpose only, then
  they should not be included in the reference manual, which is for the
  users.

  Do I misunderstand something?

 No, we just have not got around to actually implementing 2 yet.  Want to 
 help?

 I would point out that in the code, some examples in the TESTS section
 can be quite helpful to users.  So if someone wants to implement 2,
 they had better check whether each such example is worth including in
 the reference manual (and so should be moved to the EXAMPLES block) or
 not.  Including too many examples is better than including too few.

Maybe we should not bother implementing 2?Nobody has pushed to do
it, and your remark above just made it a difficult task.  It will also
be potentially be difficult to maintain, since it means potentially
tricky and bug-prone patches to how we use Sphinx *and* IPython *and*
the Notebook.

 -- William

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[sage-devel] Re: Doctest for a minor bugfix?

2009-10-12 Thread Jason Grout

William Stein wrote:
 On Mon, Oct 12, 2009 at 6:24 PM, John H Palmieri jhpalmier...@gmail.com 
 wrote:
 On Oct 12, 5:08 pm, William Stein wst...@gmail.com wrote:
 On Mon, Oct 12, 2009 at 4:45 PM, Kwankyu ekwan...@gmail.com wrote:

 Hi Minh,
 I still have a problem on this issue.
 1. TESTS: section is not documented in the developer manual as of
 Sage 4.1.1
 2. Examples in TESTS: section are still included in the Sage
 reference manual. If they are intended for test purpose only, then
 they should not be included in the reference manual, which is for the
 users.
 Do I misunderstand something?
 No, we just have not got around to actually implementing 2 yet.  Want to 
 help?
 I would point out that in the code, some examples in the TESTS section
 can be quite helpful to users.  So if someone wants to implement 2,
 they had better check whether each such example is worth including in
 the reference manual (and so should be moved to the EXAMPLES block) or
 not.  Including too many examples is better than including too few.
 
 Maybe we should not bother implementing 2?Nobody has pushed to do
 it, and your remark above just made it a difficult task.  It will also
 be potentially be difficult to maintain, since it means potentially
 tricky and bug-prone patches to how we use Sphinx *and* IPython *and*
 the Notebook.


Perhaps collapsible headings (so TESTS was automatically collapsed) 
would answer the need to not inundate the user with a million tests for 
each case of a function, while also letting the user access every bit of 
documentation if they so desire.

Jason



-- 
Jason Grout


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[sage-devel] Re: Doctest for a minor bugfix?

2009-10-12 Thread Nick Alexander

 Perhaps collapsible headings (so TESTS was automatically collapsed)

+1

Nick

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[sage-devel] Re: Doctest for a minor bugfix?

2009-10-12 Thread William Stein

On Mon, Oct 12, 2009 at 8:14 PM, Nick Alexander ncalexan...@gmail.com wrote:

 Perhaps collapsible headings (so TESTS was automatically collapsed)

 +1


To summarize all these great ideas:

   1. In the notebook, we do some sort of post processing (?) to the
output of Sphinx to add in Javascript to make a collapsible TESTS
section

   2. The TESTS section is never shown in Ipython introspection?  Or
always shown?

   3. Somebody goes through all TESTS sections in all of Sage and
makes a judgment calls to move some things out of TESTS, because
evidently the author of some tests in TESTS didn't understand what
TESTS means.

   4.  What happens in Emacs sage-mode?


Is 3 not needed because of 1 and 2?

 -- William

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[sage-devel] Re: Doctest for a minor bugfix?

2009-10-12 Thread Robert Bradshaw

On Oct 12, 2009, at 8:27 PM, William Stein wrote:


 On Mon, Oct 12, 2009 at 8:14 PM, Nick Alexander  
 ncalexan...@gmail.com wrote:

 Perhaps collapsible headings (so TESTS was automatically  
 collapsed)

 +1


 To summarize all these great ideas:

   1. In the notebook, we do some sort of post processing (?) to the
 output of Sphinx to add in Javascript to make a collapsible TESTS
 section

+1

   2. The TESTS section is never shown in Ipython introspection?  Or
 always shown?

ipython introspection is usually handled by something like less, so  
because they're at the bottom they never get in the way until the user  
scrolls all the way down.

   3. Somebody goes through all TESTS sections in all of Sage and
 makes a judgment calls to move some things out of TESTS, because
 evidently the author of some tests in TESTS didn't understand what
 TESTS means.

   4.  What happens in Emacs sage-mode?


 Is 3 not needed because of 1 and 2?

I think so.

I only put things in TESTS if it's clearly uninteresting to the end  
user, but something we want to guard against. If someone wants to  
volunteer to do this, that would be great, but I think there's higher  
priorities (e.g. adding documentation and examples to functions that  
don't have any/many). Of course, if I see something amiss when I'm  
editing relevant code I'll just fix it there.

- Robert


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[sage-devel] Re: Doctest for a minor bugfix?

2009-10-11 Thread Minh Nguyen

Hi Kwankyu,

On Mon, Oct 12, 2009 at 3:23 PM, Kwankyu ekwan...@gmail.com wrote:

SNIP

 Do I need to put a doctest anyway?

Yes. Put the doctest under a section called TESTS: and make sure to
reference the relevant ticket number. Doctests under the section
TESTS: are meant to demonstrate that a bug has been fixed. They
should also demonstrate the exceptions that are caught by the relevant
method/function/class. See, for example, the following page from the
reference manual:

http://www.sagemath.org/doc/reference/sage/rings/polynomial/multi_polynomial_ring.html#sage.rings.polynomial.multi_polynomial_ring.MPolynomialRing_polydict_domain.monomial_divides

-- 
Regards
Minh Van Nguyen

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[sage-devel] Re: Doctest for a minor bugfix?

2009-10-11 Thread Kwankyu

Thanks. I forgot the Tests section.

Kwankyu
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[sage-devel] Re: Doctest for a minor bugfix?

2009-10-11 Thread Martin Albrecht

On Monday 12 October 2009, Kwankyu wrote:
 Hi,
 
 I wrote a patch to remove the redundant minus sign in the last output
 in the following:
 
 sage: from sage.rings.polynomial.multi_polynomial_ring import
 MPolynomialRing_polydict
 sage: R.x,y=MPolynomialRing_polydict(GF(2),2,order='lex')
 sage: R
 Multivariate Polynomial Ring in x, y over Finite Field of size 2
 sage: f=x+y
 sage: f.lt()
 -x

Alex Ghitza wrote a patch to fix printing of multivariate polynomials in 
general

  http://trac.sagemath.org/sage_trac/ticket/6551

which might contain your fix. However, it needs some work before it can go in. 

Martin

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