Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object
In fact, I'm not sure is the java in my notebook have anything to do with
oracle, as I have only installed the Free Software icedtea for java
dependancies. Unluckily, icedtea which was built on my laptop doesn't work
well as icedtea-bin which was compiled by gentoo official for saving the
time of compilation.
However, you have really done a great job! Sagemath have helped a lot in my
math and some related subjects study. I have a preference for free software
and I do believe that sage will have more great influence on math and
science related software, as this kind of software helps us learn more
basic knowledge, they shouldn't have been put into commercial chains.
Best wishes to sagemath!
在 2015年7月15日星期三 UTC+8下午7:57:37，François写道：
In your original report you were using oracle java. Could be a
compatibility problem but
then in jmol.
We probably could do a better packaging job with jmol but it is a bit of a
headache.
François
On 15/07/2015, at 23:52, rt. rtgi...@gmail.com javascript: wrote:
it seems that it's the icedtea who have caused the problem, I tried to
emerged icedtea-bin and set it to be the system java-vm, and Jmol was
invoked and behaved as it should be, maybe I should post a bug for icedtea
在 2015年7月14日星期二 UTC+8上午9:39:44，François写道：
What about posting /root/.sage/temp/rt./12958/tmp_KGOIjb.txt” or its
equivalent when run
as a normal user?
I will only be able to test this tomorrow when I get physical access to
a
machine with sage-on-gentoo.
François
On 14/07/2015, at 13:35, rt. rtgi...@gmail.com wrote:
I just switch to a normal user, it still returns the same error. And
before this, I am always using root to do the daily job, and sage works
well.
(just for convinience, these days I'm considering rearrange my system,
and maybe, a normal user will be applied to do the daily job)
thanks! :)
在 2015年7月14日星期二 UTC+8上午9:23:17，François写道：
I think your problem is because you are running sage as root, but from
a
normal user session. The big clue is that your $DOT_SAGE folder is
“/root/.sage”. Please try as a normal user.
François
On 14/07/2015, at 13:14, rt. rtgi...@gmail.com wrote:
this seems not to be my case, as François said, this problem should
have been posted for sage-on-gentoo, while I haven't realized it before.
Thank you all the same!
在 2015年7月14日星期二 UTC+8上午1:37:06，Volker Braun写道：
Confirmed, this is http://trac.sagemath.org/ticket/18891
Run sage -i jmol to fix it for now.
On Monday, July 13, 2015 at 7:14:03 PM UTC+2, rt. wrote:
this is a newly built version together with gentoo, while the other
functions works well with only 3d plot failed.
As I excute the following command:
sage: var('x,y')
sage: plot3d(sin(x*y), (x, -pi, pi), (y, -pi, pi))
it returns :
/usr/lib64/python2.7/site-packages/sage/repl/rich_output/display_manager.py:561:
RichReprWarning: Exception in _rich_repr_ while displaying object: Jmol
failed to create file '/root/.sage/temp/rt./12958/dir_W9ZHtR/preview.png',
see '/root/.sage/temp/rt./12958/tmp_KGOIjb.txt' for details
RichReprWarning,
Graphics3d Object
Not knowing what's going wrong, I have rebuild Jmol, but it changed
nothing
maybe I can find the solution or reason here, and just around these
days, thanks to any help very much.
If needed, more information would be provided (as now I don't know
what's neesded.
Thanks very much!
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Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object
it seems that it's the icedtea who have caused the problem, I tried to
emerged icedtea-bin and set it to be the system java-vm, and Jmol was
invoked and behaved as it should be, maybe I should post a bug for icedtea
在 2015年7月14日星期二 UTC+8上午9:39:44，François写道：
What about posting /root/.sage/temp/rt./12958/tmp_KGOIjb.txt” or its
equivalent when run
as a normal user?
I will only be able to test this tomorrow when I get physical access to a
machine with sage-on-gentoo.
François
On 14/07/2015, at 13:35, rt. rtgi...@gmail.com javascript: wrote:
I just switch to a normal user, it still returns the same error. And
before this, I am always using root to do the daily job, and sage works
well.
(just for convinience, these days I'm considering rearrange my system,
and maybe, a normal user will be applied to do the daily job)
thanks! :)
在 2015年7月14日星期二 UTC+8上午9:23:17，François写道：
I think your problem is because you are running sage as root, but from a
normal user session. The big clue is that your $DOT_SAGE folder is
“/root/.sage”. Please try as a normal user.
François
On 14/07/2015, at 13:14, rt. rtgi...@gmail.com wrote:
this seems not to be my case, as François said, this problem should
have been posted for sage-on-gentoo, while I haven't realized it before.
Thank you all the same!
在 2015年7月14日星期二 UTC+8上午1:37:06，Volker Braun写道：
Confirmed, this is http://trac.sagemath.org/ticket/18891
Run sage -i jmol to fix it for now.
On Monday, July 13, 2015 at 7:14:03 PM UTC+2, rt. wrote:
this is a newly built version together with gentoo, while the other
functions works well with only 3d plot failed.
As I excute the following command:
sage: var('x,y')
sage: plot3d(sin(x*y), (x, -pi, pi), (y, -pi, pi))
it returns :
/usr/lib64/python2.7/site-packages/sage/repl/rich_output/display_manager.py:561:
RichReprWarning: Exception in _rich_repr_ while displaying object: Jmol
failed to create file '/root/.sage/temp/rt./12958/dir_W9ZHtR/preview.png',
see '/root/.sage/temp/rt./12958/tmp_KGOIjb.txt' for details
RichReprWarning,
Graphics3d Object
Not knowing what's going wrong, I have rebuild Jmol, but it changed
nothing
maybe I can find the solution or reason here, and just around these
days, thanks to any help very much.
If needed, more information would be provided (as now I don't know
what's neesded.
Thanks very much!
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Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object
In your original report you were using oracle java. Could be a compatibility
problem but
then in jmol.
We probably could do a better packaging job with jmol but it is a bit of a
headache.
François
On 15/07/2015, at 23:52, rt. rtgisk...@gmail.com wrote:
it seems that it's the icedtea who have caused the problem, I tried to
emerged icedtea-bin and set it to be the system java-vm, and Jmol was invoked
and behaved as it should be, maybe I should post a bug for icedtea
在 2015年7月14日星期二 UTC+8上午9:39:44，François写道：
What about posting /root/.sage/temp/rt./12958/tmp_KGOIjb.txt” or its
equivalent when run
as a normal user?
I will only be able to test this tomorrow when I get physical access to a
machine with sage-on-gentoo.
François
On 14/07/2015, at 13:35, rt. rtgi...@gmail.com wrote:
I just switch to a normal user, it still returns the same error. And before
this, I am always using root to do the daily job, and sage works well.
(just for convinience, these days I'm considering rearrange my system, and
maybe, a normal user will be applied to do the daily job)
thanks! :)
在 2015年7月14日星期二 UTC+8上午9:23:17，François写道：
I think your problem is because you are running sage as root, but from a
normal user session. The big clue is that your $DOT_SAGE folder is
“/root/.sage”. Please try as a normal user.
François
On 14/07/2015, at 13:14, rt. rtgi...@gmail.com wrote:
this seems not to be my case, as François said, this problem should have
been posted for sage-on-gentoo, while I haven't realized it before.
Thank you all the same!
在 2015年7月14日星期二 UTC+8上午1:37:06，Volker Braun写道：
Confirmed, this is http://trac.sagemath.org/ticket/18891
Run sage -i jmol to fix it for now.
On Monday, July 13, 2015 at 7:14:03 PM UTC+2, rt. wrote:
this is a newly built version together with gentoo, while the other
functions works well with only 3d plot failed.
As I excute the following command:
sage: var('x,y')
sage: plot3d(sin(x*y), (x, -pi, pi), (y, -pi, pi))
it returns :
/usr/lib64/python2.7/site-packages/sage/repl/rich_output/display_manager.py:561:
RichReprWarning: Exception in _rich_repr_ while displaying object: Jmol
failed to create file
'/root/.sage/temp/rt./12958/dir_W9ZHtR/preview.png', see
'/root/.sage/temp/rt./12958/tmp_KGOIjb.txt' for details
RichReprWarning,
Graphics3d Object
Not knowing what's going wrong, I have rebuild Jmol, but it changed
nothing
maybe I can find the solution or reason here, and just around these days,
thanks to any help very much.
If needed, more information would be provided (as now I don't know what's
neesded.
Thanks very much!
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Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object
Hi rt,
sage-on-gentoo bugs are best discussed in a github issue unless you
can reproduce it in a “vanilla” sage build. Github issue for sage-on-gentoo:
https://github.com/cschwan/sage-on-gentoo/issues
Funny that your message lead Volker to something that was wrong
in vanilla when your problem is unrelated. Volker's advice is not applicable
to your install since “sage -i” doesn’t exist in sage-on-gentoo.
Can you post /root/.sage/temp/rt./12958/tmp_KGOIjb.txt” so I can try
to figure it out.
François
On 14/07/2015, at 04:50, rt. rtgisk...@gmail.com wrote:
this is a newly built version together with gentoo, while the other functions
works well with only 3d plot failed.
As I excute the following command:
sage: var('x,y')
sage: plot3d(sin(x*y), (x, -pi, pi), (y, -pi, pi))
it returns :
/usr/lib64/python2.7/site-packages/sage/repl/rich_output/display_manager.py:561:
RichReprWarning: Exception in _rich_repr_ while displaying object: Jmol
failed to create file '/root/.sage/temp/rt./12958/dir_W9ZHtR/preview.png',
see '/root/.sage/temp/rt./12958/tmp_KGOIjb.txt' for details
RichReprWarning,
Graphics3d Object
Not knowing what's going wrong, I have rebuild Jmol, but it changed nothing
maybe I can find the solution or reason here, and just around these days,
thanks to any help very much.
If needed, more information would be provided (as now I don't know what's
neesded.
Thanks very much!
--
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[sage-devel] sage 6.7 failed to load jmol to display 3d object
this is a newly built version together with gentoo, while the other
functions works well with only 3d plot failed.
As I excute the following command:
sage: var('x,y')
sage: plot3d(sin(x*y), (x, -pi, pi), (y, -pi, pi))
it returns :
/usr/lib64/python2.7/site-packages/sage/repl/rich_output/display_manager.py:561:
RichReprWarning: Exception in _rich_repr_ while displaying object: Jmol
failed to create file '/root/.sage/temp/rt./12958/dir_W9ZHtR/preview.png',
see '/root/.sage/temp/rt./12958/tmp_KGOIjb.txt' for details
RichReprWarning,
Graphics3d Object
Not knowing what's going wrong, I have rebuild Jmol, but it changed nothing
maybe I can find the solution or reason here, and just around these days,
thanks to any help very much.
If needed, more information would be provided (as now I don't know what's
neesded.
Thanks very much!
--
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Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object
It's strange that all the file in the directory is empty，and I find
scene.spt.zip
in the subdirectory，but when try to display it directly with Jmol:
jmol /root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip
splash_image=jar:file:/usr/share/sage-jmol-bin/lib/Jmol.jar!/org/openscience/jmol/app/images/Jmol_splash.jpg
history file is /root/.jmol/history
(C) 2012 Jmol Development
Jmol Version: 14.2.11_2015.01.20 2015-01-20 12:29
java.vendor: Java: Oracle Corporation
java.version: Java 1.7.0_79
os.name: Linux
Access: ALL
memory: 44.5/97.4
processors available: 4
useCommandThread: false
User macros dir: /root/.jmol/macros
exists: false
isDirectory: false
Executing script: load
/root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip;
FileManager.getAtomSetCollectionFromFile(/root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip)
cacheGet file://root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip false
cacheGet file://root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip false
FileManager opening 2 /root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip
cacheGet file://root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip false
cacheGet file://root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip false
The Resolver thinks Xyz
line cannot be read for XYZ atom data: -3 -2.84615 0.0919047
line cannot be read for XYZ atom data: -3 -2.69231 0.806228
...
line cannot be read for XYZ atom data: 2.69231 -1.61538 1.4976
line cannot be read for XYZ atom data: 2.69231 2.69231 1.49328
line cannot be read for XYZ atom data: 2.84615 1.46154 -1.48303
line cannot be read for XYZ atom data: 2.84615 2.53846 1.49646
line cannot be read for XYZ atom data: 1521
line cannot be read for XYZ atom data: 1
line cannot be read for XYZ atom data: 41
line cannot be read for XYZ atom data: 40
...
I'm wondering is there something wrong with the data file
在 2015年7月14日星期二 UTC+8上午3:28:16，François写道：
Hi rt,
sage-on-gentoo bugs are best discussed in a github issue unless you
can reproduce it in a “vanilla” sage build. Github issue for
sage-on-gentoo:
https://github.com/cschwan/sage-on-gentoo/issues
Funny that your message lead Volker to something that was wrong
in vanilla when your problem is unrelated. Volker's advice is not
applicable
to your install since “sage -i” doesn’t exist in sage-on-gentoo.
Can you post /root/.sage/temp/rt./12958/tmp_KGOIjb.txt” so I can try
to figure it out.
François
On 14/07/2015, at 04:50, rt. rtgi...@gmail.com javascript: wrote:
this is a newly built version together with gentoo, while the other
functions works well with only 3d plot failed.
As I excute the following command:
sage: var('x,y')
sage: plot3d(sin(x*y), (x, -pi, pi), (y, -pi, pi))
it returns :
/usr/lib64/python2.7/site-packages/sage/repl/rich_output/display_manager.py:561:
RichReprWarning: Exception in _rich_repr_ while displaying object: Jmol
failed to create file '/root/.sage/temp/rt./12958/dir_W9ZHtR/preview.png',
see '/root/.sage/temp/rt./12958/tmp_KGOIjb.txt' for details
RichReprWarning,
Graphics3d Object
Not knowing what's going wrong, I have rebuild Jmol, but it changed
nothing
maybe I can find the solution or reason here, and just around these
days, thanks to any help very much.
If needed, more information would be provided (as now I don't know
what's neesded.
Thanks very much!
--
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Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object
First I would try to use sage as your regular user, then we can talk about
any problems arising.
François
On 14/07/2015, at 13:27, rt. rtgisk...@gmail.com wrote:
It's strange that all the file in the directory is empty，and I find
scene.spt.zip
in the subdirectory，but when try to display it directly with Jmol:
jmol /root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip
splash_image=jar:file:/usr/share/sage-jmol-bin/lib/Jmol.jar!/org/openscience/jmol/app/images/Jmol_splash.jpg
history file is /root/.jmol/history
(C) 2012 Jmol Development
Jmol Version: 14.2.11_2015.01.20 2015-01-20 12:29
java.vendor: Java: Oracle Corporation
java.version: Java 1.7.0_79
os.name: Linux
Access: ALL
memory: 44.5/97.4
processors available: 4
useCommandThread: false
User macros dir: /root/.jmol/macros
exists: false
isDirectory: false
Executing script: load /root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip;
FileManager.getAtomSetCollectionFromFile(/root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip)
cacheGet file://root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip false
cacheGet file://root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip false
FileManager opening 2 /root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip
cacheGet file://root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip false
cacheGet file://root/.sage/temp/rt./29736/dir_fz8ajw/scene.spt.zip false
The Resolver thinks Xyz
line cannot be read for XYZ atom data: -3 -2.84615 0.0919047
line cannot be read for XYZ atom data: -3 -2.69231 0.806228
...
line cannot be read for XYZ atom data: 2.69231 -1.61538 1.4976
line cannot be read for XYZ atom data: 2.69231 2.69231 1.49328
line cannot be read for XYZ atom data: 2.84615 1.46154 -1.48303
line cannot be read for XYZ atom data: 2.84615 2.53846 1.49646
line cannot be read for XYZ atom data: 1521
line cannot be read for XYZ atom data: 1
line cannot be read for XYZ atom data: 41
line cannot be read for XYZ atom data: 40
...
I'm wondering is there something wrong with the data file
在 2015年7月14日星期二 UTC+8上午3:28:16，François写道：
Hi rt,
sage-on-gentoo bugs are best discussed in a github issue unless you
can reproduce it in a “vanilla” sage build. Github issue for sage-on-gentoo:
https://github.com/cschwan/sage-on-gentoo/issues
Funny that your message lead Volker to something that was wrong
in vanilla when your problem is unrelated. Volker's advice is not applicable
to your install since “sage -i” doesn’t exist in sage-on-gentoo.
Can you post /root/.sage/temp/rt./12958/tmp_KGOIjb.txt” so I can try
to figure it out.
François
On 14/07/2015, at 04:50, rt. rtgi...@gmail.com wrote:
this is a newly built version together with gentoo, while the other
functions works well with only 3d plot failed.
As I excute the following command:
sage: var('x,y')
sage: plot3d(sin(x*y), (x, -pi, pi), (y, -pi, pi))
it returns :
/usr/lib64/python2.7/site-packages/sage/repl/rich_output/display_manager.py:561:
RichReprWarning: Exception in _rich_repr_ while displaying object: Jmol
failed to create file '/root/.sage/temp/rt./12958/dir_W9ZHtR/preview.png',
see '/root/.sage/temp/rt./12958/tmp_KGOIjb.txt' for details
RichReprWarning,
Graphics3d Object
Not knowing what's going wrong, I have rebuild Jmol, but it changed nothing
maybe I can find the solution or reason here, and just around these days,
thanks to any help very much.
If needed, more information would be provided (as now I don't know what's
neesded.
Thanks very much!
--
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Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object
I think your problem is because you are running sage as root, but from a
normal user session. The big clue is that your $DOT_SAGE folder is
“/root/.sage”. Please try as a normal user.
François
On 14/07/2015, at 13:14, rt. rtgisk...@gmail.com wrote:
this seems not to be my case, as François said, this problem should have been
posted for sage-on-gentoo, while I haven't realized it before.
Thank you all the same!
在 2015年7月14日星期二 UTC+8上午1:37:06，Volker Braun写道：
Confirmed, this is http://trac.sagemath.org/ticket/18891
Run sage -i jmol to fix it for now.
On Monday, July 13, 2015 at 7:14:03 PM UTC+2, rt. wrote:
this is a newly built version together with gentoo, while the other functions
works well with only 3d plot failed.
As I excute the following command:
sage: var('x,y')
sage: plot3d(sin(x*y), (x, -pi, pi), (y, -pi, pi))
it returns :
/usr/lib64/python2.7/site-packages/sage/repl/rich_output/display_manager.py:561:
RichReprWarning: Exception in _rich_repr_ while displaying object: Jmol
failed to create file '/root/.sage/temp/rt./12958/dir_W9ZHtR/preview.png',
see '/root/.sage/temp/rt./12958/tmp_KGOIjb.txt' for details
RichReprWarning,
Graphics3d Object
Not knowing what's going wrong, I have rebuild Jmol, but it changed nothing
maybe I can find the solution or reason here, and just around these days,
thanks to any help very much.
If needed, more information would be provided (as now I don't know what's
neesded.
Thanks very much!
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Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object
I just switch to a normal user, it still returns the same error. And before
this, I am always using root to do the daily job, and sage works well.
(just for convinience, these days I'm considering rearrange my system, and
maybe, a normal user will be applied to do the daily job)
thanks! :)
在 2015年7月14日星期二 UTC+8上午9:23:17，François写道：
I think your problem is because you are running sage as root, but from a
normal user session. The big clue is that your $DOT_SAGE folder is
“/root/.sage”. Please try as a normal user.
François
On 14/07/2015, at 13:14, rt. rtgi...@gmail.com javascript: wrote:
this seems not to be my case, as François said, this problem should have
been posted for sage-on-gentoo, while I haven't realized it before.
Thank you all the same!
在 2015年7月14日星期二 UTC+8上午1:37:06，Volker Braun写道：
Confirmed, this is http://trac.sagemath.org/ticket/18891
Run sage -i jmol to fix it for now.
On Monday, July 13, 2015 at 7:14:03 PM UTC+2, rt. wrote:
this is a newly built version together with gentoo, while the other
functions works well with only 3d plot failed.
As I excute the following command:
sage: var('x,y')
sage: plot3d(sin(x*y), (x, -pi, pi), (y, -pi, pi))
it returns :
/usr/lib64/python2.7/site-packages/sage/repl/rich_output/display_manager.py:561:
RichReprWarning: Exception in _rich_repr_ while displaying object: Jmol
failed to create file '/root/.sage/temp/rt./12958/dir_W9ZHtR/preview.png',
see '/root/.sage/temp/rt./12958/tmp_KGOIjb.txt' for details
RichReprWarning,
Graphics3d Object
Not knowing what's going wrong, I have rebuild Jmol, but it changed
nothing
maybe I can find the solution or reason here, and just around these
days, thanks to any help very much.
If needed, more information would be provided (as now I don't know
what's neesded.
Thanks very much!
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Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object
What about posting /root/.sage/temp/rt./12958/tmp_KGOIjb.txt” or its
equivalent when run
as a normal user?
I will only be able to test this tomorrow when I get physical access to a
machine with sage-on-gentoo.
François
On 14/07/2015, at 13:35, rt. rtgisk...@gmail.com wrote:
I just switch to a normal user, it still returns the same error. And before
this, I am always using root to do the daily job, and sage works well.
(just for convinience, these days I'm considering rearrange my system, and
maybe, a normal user will be applied to do the daily job)
thanks! :)
在 2015年7月14日星期二 UTC+8上午9:23:17，François写道：
I think your problem is because you are running sage as root, but from a
normal user session. The big clue is that your $DOT_SAGE folder is
“/root/.sage”. Please try as a normal user.
François
On 14/07/2015, at 13:14, rt. rtgi...@gmail.com wrote:
this seems not to be my case, as François said, this problem should have
been posted for sage-on-gentoo, while I haven't realized it before.
Thank you all the same!
在 2015年7月14日星期二 UTC+8上午1:37:06，Volker Braun写道：
Confirmed, this is http://trac.sagemath.org/ticket/18891
Run sage -i jmol to fix it for now.
On Monday, July 13, 2015 at 7:14:03 PM UTC+2, rt. wrote:
this is a newly built version together with gentoo, while the other
functions works well with only 3d plot failed.
As I excute the following command:
sage: var('x,y')
sage: plot3d(sin(x*y), (x, -pi, pi), (y, -pi, pi))
it returns :
/usr/lib64/python2.7/site-packages/sage/repl/rich_output/display_manager.py:561:
RichReprWarning: Exception in _rich_repr_ while displaying object: Jmol
failed to create file '/root/.sage/temp/rt./12958/dir_W9ZHtR/preview.png',
see '/root/.sage/temp/rt./12958/tmp_KGOIjb.txt' for details
RichReprWarning,
Graphics3d Object
Not knowing what's going wrong, I have rebuild Jmol, but it changed nothing
maybe I can find the solution or reason here, and just around these days,
thanks to any help very much.
If needed, more information would be provided (as now I don't know what's
neesded.
Thanks very much!
--
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Re: [sage-devel] sage 6.7 failed to load jmol to display 3d object
when excuted as a regular user, this file still comes with empty contents.
It's indeed no easy to diagnose sage-on-gentoo with no sage-on-gentoo on
the computer, now that
I have got to know the more appropriate place to report the bug, I'd better
to file bugs there later.
thanks! :)
在 2015年7月14日星期二 UTC+8上午9:39:44，François写道：
What about posting /root/.sage/temp/rt./12958/tmp_KGOIjb.txt” or its
equivalent when run
as a normal user?
I will only be able to test this tomorrow when I get physical access to a
machine with sage-on-gentoo.
François
On 14/07/2015, at 13:35, rt. rtgi...@gmail.com javascript: wrote:
I just switch to a normal user, it still returns the same error. And
before this, I am always using root to do the daily job, and sage works
well.
(just for convinience, these days I'm considering rearrange my system,
and maybe, a normal user will be applied to do the daily job)
thanks! :)
在 2015年7月14日星期二 UTC+8上午9:23:17，François写道：
I think your problem is because you are running sage as root, but from a
normal user session. The big clue is that your $DOT_SAGE folder is
“/root/.sage”. Please try as a normal user.
François
On 14/07/2015, at 13:14, rt. rtgi...@gmail.com wrote:
this seems not to be my case, as François said, this problem should
have been posted for sage-on-gentoo, while I haven't realized it before.
Thank you all the same!
在 2015年7月14日星期二 UTC+8上午1:37:06，Volker Braun写道：
Confirmed, this is http://trac.sagemath.org/ticket/18891
Run sage -i jmol to fix it for now.
On Monday, July 13, 2015 at 7:14:03 PM UTC+2, rt. wrote:
this is a newly built version together with gentoo, while the other
functions works well with only 3d plot failed.
As I excute the following command:
sage: var('x,y')
sage: plot3d(sin(x*y), (x, -pi, pi), (y, -pi, pi))
it returns :
/usr/lib64/python2.7/site-packages/sage/repl/rich_output/display_manager.py:561:
RichReprWarning: Exception in _rich_repr_ while displaying object: Jmol
failed to create file '/root/.sage/temp/rt./12958/dir_W9ZHtR/preview.png',
see '/root/.sage/temp/rt./12958/tmp_KGOIjb.txt' for details
RichReprWarning,
Graphics3d Object
Not knowing what's going wrong, I have rebuild Jmol, but it changed
nothing
maybe I can find the solution or reason here, and just around these
days, thanks to any help very much.
If needed, more information would be provided (as now I don't know
what's neesded.
Thanks very much!
--
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