[Pw_forum] About Theta_D file discription

2013-10-03 Thread Peram sreenivasa reddy
Dear pw_forum,

I am giving my Theta_D file which is generated as one of the output file
after running QHA.

I know that the First column is temperature and the second column is Debye
temperature.

I want to know what are the remaining two columns.
In Debye.f90 file it is indicated as CV_tot and coefficient. What these two
are indicating ?

# factor ===  1.
# The first   moment of phonon frequencies   : 200.29 [cm^-1]
6.07 [THz]
# The second  moment of phonon frequencies :   46946.20 [cm^-2]
43.11[THz^2]
# Debye temperature via the first   moment of phonon frequencies:
384.25[ K]
# Debye_{\infty}via the second  moment of phonon frequencies:
402.47[ K]
3.00  512.70  0.00018752  0.00018752
6.00  498.04  0.00163656  0.00163656
9.00  482.66  0.00606860  0.00606860
   12.00  459.53  0.01666791  0.01666791
   15.00  425.94  0.04088001  0.04088001
   20.00  373.58  0.14337532  0.14347501
   30.00  332.41  0.67825579  0.67834145
   40.00  330.28  1.52934594  1.52941690
   50.00  337.83  2.48113450  2.48117822
   60.00  347.09  3.42234060  3.42234636
   70.00  355.71  4.30864414  4.30863508
   80.00  363.09  5.12185893  5.12193087
   90.00  369.21  5.85523671  5.85522044
  100.00  374.22  6.50858744  6.50853649
  110.00  378.32  7.08580802  7.08578029
  120.00  381.70  7.59310901  7.59314493
  130.00  384.50  8.03771826  8.03765053
  140.00  386.83  8.42701805  8.42704144
  150.00  388.81  8.76803349  8.76794904
  160.00  390.50  9.06717130  9.06707787
  170.00  391.93  9.33011966  9.33008322
  180.00  393.17  9.56184284  9.56194230
  190.00  394.27  9.76662640  9.76671936
  200.00  395.24  9.94814538  9.94818992
  210.00  396.10 10.10953936 10.10956407
  220.00  396.88 10.25348586 10.25345863
  230.00  397.58 10.38226762 10.38224042
  240.00  398.21 10.49783224 10.49784652
  250.00  398.80 10.60184378 10.60180323
  260.00  399.33 10.69572679 10.69572173
  270.00  399.84 10.78070364 10.78065983
  280.00  400.29 10.85782588 10.85791911
  290.00  400.75 10.92800053 10.92798968
  300.00  401.16 10.99201218 10.99205501
  310.00  401.57 11.05054144 11.05052223
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[Pw_forum] Calculation of FES using constrained MD simulations

2013-10-03 Thread Ananya Mondal
Dear QE users.
I want to calculate the free energy difference  (FES) using constrained
molecular-dynamics simulations with cp.x. The free energy profile of the
reaction can be obtained by integrating the average constraint force. How
to print the constraint forces in cp.x?
Is it implemented in the cp code ?
With warm regard,
Ananya
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[Pw_forum] Pseudopotential format for virtual.x

2013-10-03 Thread Rui Mao
Dear QE users,

I was trying to use virtual.x to generate mixed Pseudo-potentials(PPs)
recently.

However, I was having trouble even getting the PPs to be read by virtual.x
The detailed error message is attached at the end.

After a little bit of research, I found that virtual.x only accepts old
Vanderbilt PP format, while nowadays, PPs are written in new XML format.

I am wondering whether there is any auxiliary conversion tool available in
QE that can transfer the new XML format to the old Vanderbilt format?
Or is there any way to make virtual.x to accept new XML format?

Error message from virtual.x (fails at the very beginning of reading input
PP files)

 Generate the UPF pseudopotential for a virtual atom
 combining two pseudopootentials in UPF format

  Input PP file #  1 in UPF format > Se.rel-pz-nc.UPF
  IOS=0   1   4
  Reading pseudopotential file in UPF format...

 %%
 from scan_begin : error # 1
 No HEADER block
 %%

 stopping ...


Thank you very much!
Regards,
Rui Mao
-- 


Department of Electrical and Computer Engineering (ECE)
North Carolina State University (NCSU)
Raleigh, NC, 27606
Email: ruimao20 at gmail.com

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[Pw_forum] Will "asr=simple", will work for Gamma point only.

2013-10-03 Thread Peram sreenivasa reddy
Dear pw_forum,

I have a question.

Will "asr=simple", will work for Gamma point only. i.e at 0 0 0 dynamical
matrices.


If i use the asr.in file to execute case.dyn2 or case.dyn3 nothing was
writing in asr.out file.

If i use it for case.dyn1 which was related to (0 0 0) dynamical matrix,
than only asr.out file consisting with modes and there frequencies.

My system have 4 atoms which will get 12 modes.

If it is like this I am getting mode frequencies like this below.

mode  cm-1  THz
  1  0.00  0.00
  2  0.00  0.00
  3  0.00  0.00
  4161.754.8492
  5161.754.8492
  6161.754.8492
  7209.566.2826
  8209.566.2826
  9209.566.2826
  10342.04   10.2542
  11342.04   10.2542
  12342.04   10.2542

In this each three modes are having same frequencies.


How can i get mode frequencies for another dynamical matrices.
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[Pw_forum] Error trying to recover aborted ph.x run

2013-10-03 Thread W2AGZ
To All;

 

While trying to recover (restart) an aborted ph.x run (actually
electron-phonon, which had been running successfully for a couple of days on
8 parallel processors), upon setting "recover=.true." I get an error message
to the effect,

 

from pp_check_file : error # 1

 file (home directory)./_ph0/job.save not found ("job" is a pseudonym)

 

However _ph0/job.phsave does exist (full of .xml files) as does job.save in
the home directory.  Should I try copying job.save to the _ph0 directory?

 

BTW, I'm running QE 4.3.2.

 

Thanks, -Paul Grant

W2AGZ Technologies

IBM Research Staff Manager Emeritus

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[Pw_forum] Phonon dispersion

2013-10-03 Thread Sanjeev Gupta
Hi

Use Xcrysden to generate the q-points.

thanks
sanjeev


On Thu, Oct 3, 2013 at 8:46 AM, Chukwuemeka Okoye wrote:

> Dear Users,
>
> I need your assistance to enable me  generate the q-points along the path
> for say, a bcc structure,
> for use in calculating the phonon frequencies i.e  in matdyn.in: for
> example along the path
> Gamma - H - P - Gamma - N for bcc or  Gamma - X -  M - Gamma - R  for
> simple cubic
>
> Thanks.
>
> C M I Okoye
>
>
>
> =
>
>
> Chukwuemeka M I Okoye
> Department of Physics and Astronomy,
> University of Nigeria,
> Nsukka.
> Enugu State,
> NIGERIA.
> Phone: +234-7038766990
> +234-8053310658
> E-mail: okoyecmi at yahoo.com, cmi.okoye at unn.edu.ng
>
> ___
> Pw_forum mailing list
> Pw_forum at pwscf.org
> http://pwscf.org/mailman/listinfo/pw_forum
>



-- 
With Best Regards,


Dr. Sanjeev Kumar Gupta
Fulbright Post-Doctoral Scholar
Dept. of Physics
Michigan Technological University
1400 Townsend Drive, Houghton
MI 49931, USA

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[Pw_forum] Phonon dispersion

2013-10-03 Thread Chukwuemeka Okoye
Dear Users,?

I need your assistance to enable me? generate the q-points along the path for 
say, a bcc structure, 

for use in calculating the phonon frequencies i.e? in matdyn.in: for example 
along the path
Gamma - H - P - Gamma - N for bcc or? Gamma - X -? M - Gamma - R? for simple 
cubic 


Thanks.

C M I Okoye


?
=


Chukwuemeka M I Okoye
Department of Physics and Astronomy,
University of Nigeria, 
Nsukka. 
Enugu State,
NIGERIA.
Phone: +234-7038766990
+234-8053310658
E-mail: okoyecmi at yahoo.com, cmi.okoye at unn.edu.ng
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[Pw_forum] RE Meaning for outputs of D3.X

2013-10-03 Thread Hugo LEVARD
Hello Payam,

take a look at this clear explanation : 
http://www.democritos.it/pipermail/pw_forum/2012-February/023255.html


Regards




 
Hugo LEVARD
Doctorant
EDF ? R&D
IRDEP - EFESE
6 Quai Watier - BP 49
78401 Chatou
 
hugo.levard at edf.fr
T?l. : 01 30 87 90 28
Fax : 01 30 87 85 65

Un geste simple pour l'environnement, n'imprimez ce message que si vous en 
avez l'utilit?.




payam.norouzzadeh at gmail.com 
Envoy? par : pw_forum-bounces at pwscf.org
03/10/2013 02:16
Veuillez r?pondre ?
pw_forum at pwscf.org


A
pw_forum at pwscf.org
cc

Objet
[Pw_forum] Meaning for outputs of D3.X






 
Hello

Is there anyone who can tell me how to interpret the results of D3.X 
program?
I run the example files and get si.anh_G and si.anh_X files but I don't 
know the meaning of some numbers. For example the numbers in the second 
row :

12  2 10.200  0.000  0.000  0.000  0.000  
0.000


the meaning of  "modo" and subsequent matrices and numbers after modo:

  modo:1

  1  1
  0.E+00  0.E+00  0.277555756156E-16
  0.E+00  0.138777878078E-16  0.E+00
  0.277555756156E-16  0.E+00  0.E+00
  0.E+00  0.340446311468E+00  0.E+00
 -0.138777878078E-16  0.E+00  0.340446311468E+00
  0.E+00  0.138777878078E-16  0.E+00

I did not find the explanation in manual.

Best regards,
Payam Norouzzadeh___
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Pw_forum at pwscf.org
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