Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Kan Su confirmed that the question is solved: Thanks Janek Kozicki, that solved my question. -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Janek Kozicki posted a new comment: > You might want to use cmake SUFFIX= or runtimePREFIX -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Janek Kozicki posted a new comment: >> Did you do anything specific to workaround this [MPFR] compilation error > No. But after I followed you suggestion at #9, setting CHUNKSIZE=1 , this > error disappeared. Thanks for the answer, this means that we have more CHUNKSIZE related bugs. > May I mark your post at #7 as the solution? sure no problem :) If you feel adventurous, maybe you would like to try building higher precision versions of yade: long double, float128, maybe even MPFR150 ? http://yade-dem.org/doc/HighPrecisionReal.html you only need to pass this cmake parameter for each of the builds: REAL_DECIMAL_PLACES=18 REAL_DECIMAL_PLACES=33 REAL_DECIMAL_PLACES=150 each of these builds generate a different yade binary with different default precision of calculations. You might want to use cmake SUFFIX=.. parameter to generate yade binaries (and .so files) with corresponding different names. long double calculations are 1.4 times slower, float128 are 4.9 times slower, mpfr150 are 19.8 times slower. -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Kan Su posted a new comment: > > I did turn off MPFR, the error message is the same. > Did you do anything specific to workaround this compilation error: > This error looked like a problem with mpfr wrapper in boost, specifically in file max_digits10.hpp, but then somehow you managed to compile with MPFR ? No. But after I followed you suggestion at #9, setting CHUNKSIZE=1 , this error disappeared. > this is good news. We will use ver9 files for testing ver8.2 I added a hack in the PKGBUILD to use ver9 files for testing ver8.2. BTW, I noticed that vtk8.2.0 is flagged out-of-date in arch community repo, https://archlinux.org/packages/community/x86_64/vtk/ may be it will be updated to vtk9.0 soon. May I mark your post at #7 as the solution? Actually I think #9 solved my problem, but I can't mark it as a solution. -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Janek Kozicki posted a new comment: > After I copied all files from potentialVTKRecorders/ver9/ to potentialVTKRecorders/ver8.2/, all checks passed! this is good news. We will use ver9 files for testing ver8.2 -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Janek Kozicki posted a new comment: Yade features : ... MPFR ... | boost | 1.75.0 | 1.75.0 | | mpfr | 4.1.0 | 4.1.0 | > I did turn off MPFR, the error message is the same. Did you do anything specific to workaround this compilation error: /usr/include/boost/multiprecision/traits/max_digits10.hpp:51:43: in 'constexpr' expansion of 'boost::multiprecision::detail::calc_digits10<151>::digits_10(151)' /usr/include/boost/multiprecision/traits/max_digits10.hpp:49:96: error: '(3.010299956639812e-1 * 1.5e+2)' is not a constant expression This error looked like a problem with mpfr wrapper in boost, specifically in file max_digits10.hpp, but then somehow you managed to compile with MPFR ? -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Kan Su posted a new comment: Thanks, It works! After I copied all files from potentialVTKRecorders/ver9/ to potentialVTKRecorders/ver8.2/, all checks passed! ``` yade --checkall Welcome to Yade 2021.01a Using python version: 3.9.1 (default, Dec 13 2020, 11:55:53) [GCC 10.2.0] /usr/lib/yade/py/yade/__init__.py:76: RuntimeWarning: to-Python converter for boost::shared_ptr already registered; second conversion method ignored. boot.initialize(plugins,config.confDir) ### running: checkViscElPM.py Status: success, time spent on this check: 0:00:00.194854 ___ ### running: checkPolyhedraCrush.py CGAL version is (4, 14, 3) . Will test for (cgal version > 4.9) and (cgal version < 5.1.1) PolyhedraSplitter:96 virtual void yade::PolyhedraSplitter::action(): be careful, the PolyhedraSplitter returns different results depending on CGAL version! This will not produce reproducible calculations. For details see https://gitlab.com/yade-dev/trunk/issues/45 Checkpoint: force values and number of bodies are OK! Iteration 166 Status: success, time spent on this check: 0:00:00.104968 ___ ### running: checkMPI4PYcomm.py Master: will spawn 1 workers running: /usr/bin/yade ['/usr/lib/yade/py/yade/tests/checks/checkMPI4PYcomm.py'] /usr/lib/yade/py/yade/__init__.py:76: RuntimeWarning: to-Python converter for boost::shared_ptr already registered; second conversion method ignored. boot.initialize(plugins,config.confDir) Warning: freeglut versions higher than 2.8.1 are known to crash, see https://gitlab.com/yade-dev/trunk/merge_requests/160 https://gitlab.com/yade-dev/trunk/-/issues/155 https://gitlab.com/yade-dev/trunk/-/issues/107 Worker1: spawned! MPI comm times: 1e4 integers in a python list: 0.0005977869033813477 1e4 integers in a python array: 6.968975067138672e-05 Status: success, time spent on this check: 0:00:00.874305 ___ ### running: checkAvoidSelfInteractionMask.py testing collider.avoidSelfInteractionMask 0 bb br gg gr rr 1 bb br gr 2 br gg gr 3 br gr Status: success, time spent on this check: 0:00:00.004887 ___ ### running: checkPotentialVTKRecorders.py checking file: /tmp/tmpiu_jfshd/potentialVTKRecorders/ppcontactPoint.10.vtu checking file: /tmp/tmpiu_jfshd/potentialVTKRecorders/ppId.10.vtu checking file: /tmp/tmpiu_jfshd/potentialVTKRecorders/pp-pb.10.vtp checking file: /tmp/tmpiu_jfshd/potentialVTKRecorders/ppvel.10.vtu non-matching lines: 0 checking file: /tmp/tmpiu_jfshd/potentialVTKRecorders/pbcontactPoint.10.vtu checking file: /tmp/tmpiu_jfshd/potentialVTKRecorders/pbId.10.vtu checking file: /tmp/tmpiu_jfshd/potentialVTKRecorders/pb-pb.10.vtp checking file: /tmp/tmpiu_jfshd/potentialVTKRecorders/pbvel.10.vtu non-matching lines: 0 Status: success, time spent on this check: 0:00:00.087385 ___ ### running: checkViscElPM2.py Status: success, time spent on this check: 0:00:00.202185 ___ ### running: check_TwoPhaseFlowEngine_PressureInjection.py /usr/lib/yade/py/yade/plot.py:463: MatplotlibDeprecationWarning: The 'verts' parameter of scatter() was deprecated in Matplotlib 3.2 and will be removed two minor releases later. If any parameter follows 'verts', they should be passed as keyword, not positionally. scatter=pylab.scatter(scatterPt[0] if not math.isnan(scatterPt[0]) else 0,scatterPt[1] if not math.isnan(scatterPt[1]) else 0,s=scatterSize,color=line.get_color(),**scatterMarkerKw) File ./vtk moved into /tmp/tmpftqt2gzj/ directory File ./Test.txt moved into /tmp/tmpftqt2gzj/ directory Status: success, time spent on this check: 0:00:04.746889 ___ ### running: checkVTKRecorder.py checkVTKRecorder checking file: /tmp/tmpf1dlsg0k/vtk_testing/10.vtm checking file: /tmp/tmpf1dlsg0k/vtk_testing/10/10_0.vtu checking file: /tmp/tmpf1dlsg0k/vtk_testing/10/10_2.vtp non-matching lines: 113 Status: success, time spent on this check: 0:00:00.062857 ___ ### running: checkTestDummy.py checkTest mechanism Status: success, time spent on this check: 0:00:00.001540 ___ ### Skipping checkMPISilo.py, because it is in skipScripts. ### running: checkLubrication.py Status: success, time spent on this check: 0:00:01.686369 ___ ### running: checkLubricationWithRoughness.py Status: suc
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Janek Kozicki posted a new comment: In fact try to take all these files from potentialVTKRecorders/ver9/ and see :) -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Janek Kozicki posted a new comment: I mean potentialVTKRecorders/ver9/pbcontactPoint.10.vtu -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Janek Kozicki posted a new comment: > potentialVTKRecorders/ver8.2/pbcontactPoint.10.vtu does it work if you take similar file from ver9 ? -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Kan Su posted a new comment: Thanks a lot! I re-complied with VECTORIZE=OFF and ran all tests and checks again. All tests passed, but one check failed. ``` checkPotentialVTKRecorders.py failure, caught exception FileNotFoundError : [Errno 2] No such file or directory: '/usr/lib/yade/py/yade/tests/checks/data/potentialVTKRecorders/ver8.2/pbcontactPoint.10.vtu' ``` I then wen to the directory. Not that there's no file named `pbcontactPoint.10.vtu` but only one named `ppcontactPoint.10.vtu` ``` ➜ yade git:(master) ✗ cd /usr/lib/yade/py/yade/tests/checks/data/potentialVTKRecorders/ver8.2/ ➜ ver8.2 ll total 52K -rw-r--r-- 1 root root 38K Jan 21 00:09 pp-pb.10.vtp -rw-r--r-- 1 root root 1.4K Jan 21 00:09 ppId.10.vtu -rw-r--r-- 1 root root 2.2K Jan 21 00:09 ppcontactPoint.10.vtu -rw-r--r-- 1 root root 2.8K Jan 21 00:09 ppvel.10.vtu ``` -- Below are the output of printAllVersions, tests and checks ``` ➜ yade git:(master) ✗ yade Welcome to Yade 2021.01a Using python version: 3.9.1 (default, Dec 13 2020, 11:55:53) [GCC 10.2.0] /usr/lib/yade/py/yade/__init__.py:76: RuntimeWarning: to-Python converter for boost::shared_ptr already registered; second conversion method ignored. boot.initialize(plugins,config.confDir) TCP python prompt on localhost:9000, auth cookie `esdcsk' XMLRPC info provider on http://localhost:21000 QSettings::value: Empty key passed QSettings::value: Empty key passed Warning: freeglut versions higher than 2.8.1 are known to crash, see https://gitlab.com/yade-dev/trunk/merge_requests/160 https://gitlab.com/yade-dev/trunk/-/issues/155 https://gitlab.com/yade-dev/trunk/-/issues/107 [[ ^L clears screen, ^U kills line. F12 controller, F11 3D view (press "h" in 3D view for help), F10 both, F9 generator, F8 plot. ]] In [1]: printAllVersions() ``` Yade version : 2021.01a Yade features : BoostLog RealHP mpmath PrecisionDouble MPFR Odeint VTK OpenMP GTS GUI-Qt5 CGAL PFVFLOW PFVFLOW LINSOLV CHOLMOD_GPU MPI TWOPHASEFLOW SPH DEFORM FEMLIKE LIQMIGRATION GL2PS LBMFLOW MASK_ARBITRARY THERMAL PARTIALSAT PROFILING PotentialParticles PotentialBlocks Yade config dir: ~/.yade Yade precision : 53 bits, 15 decimal places, with mpmath Yade RealHP<…> : (15, 33, 45, 60, 120, 150, 300) decimal digits in C++, (15, 33) decimal digits accessible from python ``` Libraries used : | library | cmake | C++ | | - | - | --- | | boost | 1.75.0| 1.75.0 | | cgal | | 4.14.3 | | clp | 1.17.6| 1.17.6 | | cmake | 3.19.3| | | coinutils | 2.11.4| 2.11.4 | | compiler | /usr/bin/c++ 10.2.0 | gcc 10.2.0 | | eigen | 3.3.9 | 3.3.9 | | freeglut | 3.0.0 | | | gl| | 20190805| | ipython | 7.19.0| | | metis | | 5.1.0 | | mpfr | 4.1.0 | 4.1.0 | | mpi | 3.1 | ompi:4.0.5 | | mpi4py| 3.0.3 | | | mpmath| 1.1.0 | | | openblas | | OpenBLAS 0.3.13| | python| 3.9.1 | 3.9.1 | | qglviewer | | 2.7.2 | | qt| | 5.15.2 | | sqlite| | 3.34.0 | | suitesparse | 5.8.1 | 5.8.1 | | vtk | 8.2.0 | 8.2.0 | ``` Linux version : Arch Linux Architecture : unknown Little endian : True ``` ``` ``` ➜ yade git:(master) ✗ yade --test Using python version: 3.9.1 (default, Dec 13 2020, 11:55:53) [GCC 10.2.0] /usr/lib/yade/py/yade/__init__.py:76: RuntimeWarning: to-Python converter for boost::shared_ptr already registered; second conversion method ignored. boot.initialize(plugins,config.confDir) Using PrecisionDouble with 15 digits. Using (15, 33) decimal digits in python. Importing mpmath testDummySomething (yade.tests.dummyTest.TestDummy) ... ok testDummySomethingElse (yade.tests.dummyTest.TestDummy) ... ok testMatrix3 (yade.TestEigenWrapper) Math: Matrix3 operations ... ok testQuaternion (yade.TestEigenWrapper) Math: Quaternion operations ... ok testVector2 (yade.TestEigenWrapper) Math: Vector2 operations ... ok testVector3 (yade.TestEigenWrapper) Math: Vector3 operations ... ok testClassCtors (yade.TestObjectInstantiation) Core: corre
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Janek Kozicki posted a new comment: > [asustx:310193] Signal: Segmentation fault (11) > [asustx:310193] Signal code: (128) > [asustx:310193] Failing at address: (nil) > [asustx:310193] [ 0] /usr/lib/libc.so.6(+0x3d6a0)[0x7f9c06e306a0] It could be a compiler bug in the memory alignment of variables. In this case VECTORIZE=OFF (not using SSE instructions) would solve this. This is the reason why SSE is not enabled by default. It is still experimental. If this does not help then maybe cmake linked with a wrong version of some library. Maybe check if you get these crashes when ENABLE_OPENMP=OFF or ENABLE_MPI=OFF, because cmake had problems finding one of these. > Warning: freeglut versions higher than 2.8.1 are known to crash We still have no fix for that. When you open GUI and the 3D view of the scene, it will crash. -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Kan Su posted a new comment: 1. printAllVersions() ``` ➜ ~ yade Welcome to Yade 2021.01a Using python version: 3.9.1 (default, Dec 13 2020, 11:55:53) [GCC 10.2.0] /usr/lib/yade/py/yade/__init__.py:76: RuntimeWarning: to-Python converter for boost::shared_ptr already registered; second conversion method ignored. boot.initialize(plugins,config.confDir) :228: RuntimeWarning: to-Python converter for Eigen::Matrix already registered; second conversion method ignored. :228: RuntimeWarning: to-Python converter for Eigen::Matrix, 3, 1, 0, 3, 1> already registered; second conversion method ignored. TCP python prompt on localhost:9000, auth cookie `eusdks' XMLRPC info provider on http://localhost:21000 QSettings::value: Empty key passed QSettings::value: Empty key passed Warning: freeglut versions higher than 2.8.1 are known to crash, see https://gitlab.com/yade-dev/trunk/merge_requests/160 https://gitlab.com/yade-dev/trunk/-/issues/155 https://gitlab.com/yade-dev/trunk/-/issues/107 [[ ^L clears screen, ^U kills line. F12 controller, F11 3D view (press "h" in 3D view for help), F10 both, F9 generator, F8 plot. ]] In [1]: printAllVersions() ``` Yade version : 2021.01a Yade features : BoostLog RealHP mpmath PrecisionDouble MPFR VECTORIZE Odeint VTK OpenMP GTS GUI-Qt5 CGAL PFVFLOW PFVFLOW LINSOLV CHOLMOD_GPU MPI TWOPHASEFLOW SPH DEFORM FEMLIKE LIQMIGRATION GL2PS LBMFLOW MASK_ARBITRARY THERMAL PARTIALSAT PROFILING PotentialParticles PotentialBlocks Yade config dir: ~/.yade Yade precision : 53 bits, 15 decimal places, with mpmath Yade RealHP<…> : (15, 33, 45, 60, 120, 150, 300) decimal digits in C++, (15, 33) decimal digits accessible from python ``` Libraries used : | library | cmake | C++ | | - | - | --- | | boost | 1.75.0| 1.75.0 | | cgal | | 4.14.3 | | clp | 1.17.6| 1.17.6 | | cmake | 3.19.3| | | coinutils | 2.11.4| 2.11.4 | | compiler | /usr/bin/c++ 10.2.0 | gcc 10.2.0 | | eigen | 3.3.9 | 3.3.9 | | freeglut | 3.0.0 | | | gl| | 20190805| | ipython | 7.19.0| | | metis | | 5.1.0 | | mpfr | 4.1.0 | 4.1.0 | | mpi | 3.1 | ompi:4.0.5 | | mpi4py| 3.0.3 | | | mpmath| 1.1.0 | | | openblas | | OpenBLAS 0.3.13| | python| 3.9.1 | 3.9.1 | | qglviewer | | 2.7.2 | | qt| | 5.15.2 | | sqlite| | 3.34.0 | | suitesparse | 5.8.1 | 5.8.1 | | vtk | 8.2.0 | 8.2.0 | ``` Linux version : Arch Linux Architecture : unknown Little endian : True ``` ``` 2. It doesn't pass all checks and tests ``` ➜ ~ yade --test Using python version: 3.9.1 (default, Dec 13 2020, 11:55:53) [GCC 10.2.0] /usr/lib/yade/py/yade/__init__.py:76: RuntimeWarning: to-Python converter for boost::shared_ptr already registered; second conversion method ignored. boot.initialize(plugins,config.confDir) :228: RuntimeWarning: to-Python converter for Eigen::Matrix already registered; second conversion method ignored. :228: RuntimeWarning: to-Python converter for Eigen::Matrix, 3, 1, 0, 3, 1> already registered; second conversion method ignored. Using PrecisionDouble with 15 digits. Using (15, 33) decimal digits in python. Importing mpmath testDummySomething (yade.tests.dummyTest.TestDummy) ... ok testDummySomethingElse (yade.tests.dummyTest.TestDummy) ... ok testMatrix3 (yade.TestEigenWrapper) Math: Matrix3 operations ... ok testQuaternion (yade.TestEigenWrapper) Math: Quaternion operations ... ok testVector2 (yade.TestEigenWrapper) Math: Vector2 operations ... ok testVector3 (yade.TestEigenWrapper) Math: Vector3 operations ... ok testClassCtors (yade.TestObjectInstantiation) Core: correct types are instantiated ... ok testDispatcherCtor (yade.TestObjectInstantiation) Core: dispatcher ctors with functors ... ok testHidden (yade.TestObjectInstantiation) Core: Attr::hidden ... ok testInteractionLoopCtor (yade.TestObjectInstantiation) Core: InteractionLoop special ctor ... ok testInvalidAttr (yade.TestObjectInstantiation) Core: invalid attribute access raises AttributeError ... ok testNoSave (yade.TestObjectInstan
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Janek Kozicki posted a new comment: can you post now what prints the command printAllVersions() and does it pass checks and tests: yade --test yade --checkall Thanks! -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #695081]: [Solved] Compilation failed on vtk8.2.0
Question #695081 on Yade changed: https://answers.launchpad.net/yade/+question/695081 Summary changed to: [Solved] Compilation failed on vtk8.2.0 Description changed to: Update: This was solved at #9, and the answer is summerized at #10. Below are the original posts. Sorry for my English first, it's not my mother language. I'm trying to build yade-2021.01a from source for Archlinux (linux 5.10.7). I'm trying to complie it with most feature enabled. But I found several problems: 1. I'm using CMake 3.19.3. When I use ``` cmake ../trunk \ -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_INSTALL_LIBDIR=lib -DNOSUFFIX=ON -DPYTHON_VERSION=-1 \ -DENABLE_SPH=ON -DENABLE_PROFILING=ON -DCHOLMOD_GPU=ON -DENABLE_LIQMIGRATION=ON -DENABLE_MASK_ARBITRARY=ON -DENABLE_DEFORM=ON -DVECTORIZE=ON -DENABLE_OAR=ON \ -DENABLE_MPFR=ON -DENABLE_PARTIALSAT=ON\ -DruntimePREFIX=/usr -DCHUNKSIZE=50 -DOpenGL_GL_PREFERENCE=GLVND\ -DENABLE_USEFUL_ERRORS=ON -DENABLE_POTENTIAL_BLOCKS=ON ``` It said `OpenMP NOT found`. But I'm sure I have installed the openmp package. After searching it on google, I modified the `trunk/CMakeLists.txt`, added ` /usr/share/cmake-3.19//Modules/` to `CMAKE_MODULE_PATH`, then this problem was solved. ``` -- Found OpenMP_C: -fopenmp (found version "4.5") CMake Warning (dev) at /usr/share/cmake-3.19/Modules/FindPackageHandleStandardArgs.cmake:426 (message): The package name passed to `find_package_handle_standard_args` (OpenMP_CXX) does not match the name of the calling package (OpenMP). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): /usr/lib/cmake/vtk-8.2/vtkm/FindOpenMP.cmake:485 (find_package_handle_standard_args) CMakeLists.txt:683 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Could NOT find OpenMP_CXX (missing: OpenP_CXX_FLAGS OpenMP_CXX_LIB_NAMES) -- Could NOT find OpenMP (missing: OpenMP_CXX_FOUND) (found version "4.5") -- OpenMP NOT found ``` 2. Then I began to compile, everything went fine at first, I noticed that most features were enabled: ``` -- Yade configured with following features: BoostLog RealHP mpmath PrecisionDouble MPFR VECTORIZE Odeint VTK OpenMP GTS GUI-Qt5 CGAL PFVFLOW PFVFLOW LINSOLV CHOLMOD_GPU MPI TWOPHASEFLOW SPH DEFORM FEMLIKE LIQMIGRATION GL2PS LBMFLOW MASK_ARBITRARY THERMAL PARTIALSAT PROFILING PotentialParticles PotentialBlocks -- Disabled features: -- Using MAX_LOG_LEVEL=5, ENABLE_LOGGER=ON -- Optimized build -- C++ standard version: 17 ``` However, when the compiling process went to around 47%, an error occured. ``` /tmp/makepkg/yade/src/trunk/pkg/common/Gl1_PotentialBlock.cpp:694:31: error: no matching function for call to 'vtkUnsignedCharArray::InsertNextTuple(unsigned char [3])' 694 |pbColors->INSERT_NEXT_TUPLE(c); | ^ In file included from /usr/include/vtk/vtkIntArray.h:33, from /usr/include/vtk/vtkCellTypes.h:42, from /usr/include/vtk/vtkPolyData.h:64, from /tmp/makepkg/yade/src/trunk/pkg/common/Gl1_PotentialBlock.hpp:15, from /tmp/makepkg/yade/src/trunk/pkg/common/Gl1_PotentialBlock.cpp:9, from /tmp/makepkg/yade/src/build/pkg.0.cpp:9: /usr/include/vtk/vtkAOSDataArrayTemplate.h:214:13: note: candidate: 'vtkIdType vtkAOSDataArrayTemplate::InsertNextTuple(const float*) [with ValueTypeT = unsigned char; vtkIdType = long long int]' 214 | vtkIdType InsertNextTuple(const float *tuple) override; | ^~~ /usr/include/vtk/vtkAOSDataArrayTemplate.h:214:42: note: no known conversion for argument 1 from 'unsigned char [3]' to 'const float*' 214 | vtkIdType InsertNextTuple(const float *tuple) override; | ~^ /usr/include/vtk/vtkAOSDataArrayTemplate.h:215:13: note: candidate: 'vtkIdType vtkAOSDataArrayTemplate::InsertNextTuple(const double*) [with ValueTypeT = unsigned char; vtkIdType = long long int]' 215 | vtkIdType InsertNextTuple(const double *tuple) override; | ^~~ /usr/include/vtk/vtkAOSDataArrayTemplate.h:215:43: note: no known conversion for argument 1 from 'unsigned char [3]' to 'const double*' 215 | vtkIdType InsertNextTuple(const double *tuple) override; | ~~^ /usr/include/vtk/vtkAOSDataArrayTemplate.h:218:13: note: candidate: 'vtkIdType vtkAOSDataArrayTemplate::InsertNextTuple(vtkIdType, vtkAbstractArray*) [with ValueTypeT = unsigned char; vtkIdType = long long int]' 218 | vtkIdType InsertNextTuple(vtkIdType srcTupleIdx, | ^~~ /usr/include/vtk/vtkAOSDataArrayTemplate.h:218:13: note: candidate expects 2 arguments, 1 provided
