Hi.
Check the page for the MoEx-1_0-st chip, it has CDF files you can
download:
http://groups.google.com/group/aroma-affymetrix/web/moex-1-0-st
Cheers,
Mark
On 08/05/2009, at 11:35 PM, telos wrote:
>
> Hi,
>
> I'd like to run FIRMA on mouse Exon array data. For this, it seem that
> I need sp
Hi Jun.
Comments below.
On 28/02/2009, at 3:29 AM, Jun wrote:
> Hi,
>
> I try to get help on finding annotation for the cluster id shown in
> the cdf files.
> For the human exon array, I saw the latest transcript cluster
> annotation (.csv) dated as 11/24/08 at the Affymetrix website. The CDF
>
Here's the reply from Affymetrix Tech Support:
***
Hello Dr Fass-
There is only a minor difference between the v1 and the v2 library
files and it has to do with the manufacturing controls on the array.
There is no difference with the probes interrogating t
Thanks Henrik and Mark,
I had found the comment at the dChip forum that you found, Henrik, but
wasn't convinced ... I'll try contacting Affymetrix and try doing some
analysis, and post back here if that clears this up.
~Joe
On Nov 25, 6:19 pm, "Henrik Bengtsson" <[EMAIL PROTECTED]> wrote:
> I
I found this comment by Cheng Li at the dChip forum: "You can rename
"HuEx-1_0-st-v2.pgf" to "HuEx-1_0-st-v1.pgf". I understand the two
should be for the same physical array, but just different annotation
of probes into probeset."
[http://dchip.forum5.com/viewtopic.php?t=214&mforum=dchip]
More a
Hi Joe.
While I've analyzed several Exon array datasets, I have never seen any
HuEx-1_0-st-v1 CEL files. Did you get a very early version of these
chips? From what I can tell from the Affymetrix web site, there is no
annotation or anything available for this. But, typically the
annotati
I'll let the experts on exon arrays answer this, but for clarification
this question is related to page:
http://groups.google.com/group/aroma-affymetrix/web/affymetrix-defined-transcript-clusters
/Henrik
On Tue, Nov 25, 2008 at 4:57 PM, Joe Fass <[EMAIL PROTECTED]> wrote:
>
> This may not be th
