Re: [Artemis-users] out-of-range error in ACT

2007-07-26 Thread Derek Gatherer
Thanks Tim Yes, that is the answer - use FASTA format for DoubleACT but then feed ACT the GenBank format files, plus the comparison file made from the FASTA files. DoubleACT clearly has no problem with accepting GenBank input, but then the output is uninterpretable by ACT itself!! Cheers

Re: [Artemis-users] out-of-range error in ACT

2007-07-26 Thread Tim Carver
Hi Derek I haven't heard reports of this. I *think* DoubleACT may just be expecting fasta format. A quick solution to this is to use the WebACT version and right click in the middle over the comparison part of the window. This should give you a popup menu with an option to save out the comparison

[Artemis-users] out-of-range error in ACT

2007-07-26 Thread Derek Gatherer
Dear Artemis/ACT users I have an odd error in ACT: comparison file read failed: out of range error: match goes off end of subject sequence: 251970 The two short genomes I am comparing are: NC_002512 at 230138 residues, and NC_004065 at 230278 residues. I have checked both of the GenBank