Re: [base] Importing reporterlist into BASE2 [was Base1PluginExecutor]

2008-03-14 Thread Nick Loman
Nick Loman wrote: Alternatively, maybe there are other plugins/BASE functions which do the same thing as MGH, particularly the fold ratio and p-value functions? An alternative question. Given a reporter list of the below format generated by the MGH plugin p-value: reporterId | score

Re: [base] BASE2 backups

2008-03-11 Thread Nick Loman
Nicklas Nordborg wrote: You might consider using mysqlhotcopy to get the files out, either on the master or the replica, as this is much quicker than mysqldump. No we can't since it doesn't work with InnoDB tables. Ah true. I guess a replica is the best way to go in that case. I've never

Re: [base] Base1PluginExecutor

2008-03-07 Thread Nick Loman
Bob MacCallum wrote: The tricks are (in no particular order) * share the plugin definition and configuration to everyone * configure the plugin using the the config files in Root's /BASE 1 plugin configuration files folder. Hi Thanks for replies Bob/Nicklas. I had to make the

[base] BASE Lowess Normalization Plugin

2008-01-18 Thread Nick Loman
Hi there I wanted to use the Lowess Normalization plugin and couldn't see a way of accessing it anywhere in the menus, so figured that the plugin may need to be configured first. As per your demo server, I tried to manually add the plugin via Administrate - Plugins - Definitions. I selected

Re: [base] BASE Lowess Normalization Plugin

2008-01-18 Thread Nick Loman
Pawel Sztromwasser wrote: Could you check if you are not using any filters in plugins view that could narrow results? Bingo, that was the problem. It was a filter way to the right of the page I didn't notice. - This

Re: [base] BASE Lowess Normalization Plugin

2008-01-18 Thread Nick Loman
Pawel Sztromwasser wrote: It seems like the plugin is there. Check if this plugin has been shared to your user (Administrate-Plugins-Definitions and find the plugin). If not, only administrator/superuser can change that. If it is shared to you then it should be accessible. Hi Pawel