hi to all,
i had a file which contained following data:
# BLASTN 2.2.9 [May-01-2004]
# Query: gi|37182815|gb|AY358849.1| Homo sapiens clone DNA180287 ALTE (UNQ6508) mRNA,
complete cds
# Database: nr
# Fields: Query id, Subject id, % identity, alignment length, mismatches, gap
openings, q. sta
Try changing "Fields->{Update}"
to
"Fields->{update}"
or
"Fields->update()"
-Original Message-
From: Ilaiy [mailto:[EMAIL PROTECTED]
Sent: Sat 6/12/2004 2:39 PM
To: [EMAIL PROTECTED]
Cc:
Subject: Microsoft Word and Perl
On Jun 10, Beau E. Cox said:
>sub parse_words
>{
>my $line = shift;
>my @words = ();
>
>$_ = $line;
You should localize $_ if you're going to be assigning to it explicitly.
local $_ = $line;
>while( 1 ) {
>s/^\s*(.*?)\s*$/$1/;
This is not a very efficient way to remov
On Jun 11, JupiterHost.Net said:
>Randy W. Sims wrote:
>
>> A better solution would be to allow only a subset of metacharacters,
>> escaping everything else. This would requre much more effort, but would
>> be safer. Perhaps there is a module that does something like this? If
>> not, there should
hello everyone,
i have a list of gi accession ids:
e.g.
gi|5104821|dbj|AP61.1|
gi|5104188|dbj|AP60.1|gi|5105654|dbj|AP63.1|gi|26793562|emb|AJ525326.1|ATH525326
etc.
is it possible to parse through their summaries available at
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Nucleo
On 6/13/2004 11:19 AM, aditi gupta wrote:
hello everyone,
i have a list of gi accession ids:
e.g.
gi|5104821|dbj|AP61.1|
gi|5104188|dbj|AP60.1|gi|5105654|dbj|AP63.1|gi|26793562|emb|AJ525326.1|ATH525326
etc.
is it possible to parse through their summaries available at
http://www.ncb
Your code can be simplified quite a bit if I correctly understand what you
were actually trying to do. I have taken a stab at it but had to guess at
your intent with the layout of the fields. Let's clear up the field layout.
Your data have 9 fields (at least to the untrained eye), separated by the
hi,
when u click at the link which i mentioned, you will find:
'search [Nucleotide] for [ ]'
when u'll paste a gi id e.g. gi|5104821|dbj|AP61.1| in space after 'for',
a page will open where u will see highlighted accession id: AP61.
when u'll click at this, a default information pa
aditi gupta wrote:
hi,
when u click at the link which i mentioned, you will find:
'search [Nucleotide] for [ ]'
when u'll paste a gi id e.g. gi|5104821|dbj|AP61.1| in space after 'for',
a page will open where u will see highlighted accession id: AP61.
when u'll click at this, a def
