=
Xiangli Zhang (Justin)
306-310 Decaire Street, Coquitlam
BC, Canada, V3K 6X1
phone: 604-9399181
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Can anybody tell me how to execute a perl file in perl cgi? E.g "test.cgi " and
"file.pl", I want to add one line to execute file.pl in test.cgi. How I can do it?
Justin
Xiangli Zhang (Justin)
306-310 Decaire Street, Coquitlam
BC, Canada, V3K 6X
se_complement {
my $self = shift;
$self->{seq} = rc($self->{seq});
return $self
}
sub rc {
my $rseq = shift;
$rseq = reverse $rseq;
$rseq =~ tr/ATGCatgc/TACGtacg/;
return $rseq;
}
sub scan {
my $self = shift;
my $qseq = uc(shift);
my $degen = shift;
my
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Xiangli Zhang wrote:
I got the following error when one cgi file 'test.cgi' was called from HTML:
Can't call method "sequence" on an undefined value
However I can run 'test.cgi'
"secondFile");
my $test1=$seq1->next_seq();
my $test2=$seq2->next_seq();
my $s1=$test1->sequence();
my $s2=$test2->sequence();
print "input1===$s1\n";
print "input2===$s2\n";
($sa,$sb)=DNAalign::align($test1,$test1);
***$result1=$sa->sequence();
***$result2=
);
my $s1=$test1->sequence();
my $s2=$test2->sequence();
print "input1===$s1\n";
print "input2===$s2\n";
($sa,$sb)=DNAalign::align($test1,$test1);
$result1=$sa->sequence();
$result2=$sb->sequence();
print "\n";
print "result1=== $result1\n";
pri
);
my $s1=$test1->sequence();
my $s2=$test2->sequence();
print "input1===$s1\n";
print "input2===$s2\n";
($sa,$sb)=DNAalign::align($test1,$test1);
$result1=$sa->sequence();
$result2=$sb->sequence();
print "\n";
print "
Anyone know example how to use "require" function
passing string variable?
thanks,
Note: forwarded message attached.
=====
Xiangli Zhang (Justin)
306-310 Decaire Street, Coquitlam
BC, Canada, V3K 6X1
phone: 604-9399181
__
Do you Y
nks a lot,
justin
Xiangli Zhang (Justin)
306-310 Decaire Street, Coquitlam
BC, Canada, V3K 6X1
phone: 604-9399181
-
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OTECTED]) or die $sg->error;
print "Content-type: image/png\n\n".$si->png;
print $si->png; #try second graph
=
Xiangli Zhang (Justin)
306-310 Decaire Street, Coquitlam
BC, Canada, V3K 6X1
phone: 604-9399181
__
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ut!
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On Sun, 18 Jul 2004, Xiangli Zhang wrote:
> In my perl cgi(say sequence.cgi), i want to call an
> installed perl script application (phredPhrap under
> directory /usr/local/bin).
>
> I use system("phredPhrap&
In my perl cgi(say sequence.cgi), i want to call an
installed perl script application (phredPhrap under
directory /usr/local/bin).
I use system("phredPhrap"); to call it in my cgi file.
When I run my cgi file at command terminal
"phredPhrap" is executed, it works, but at web
browser, "phredPhrap"
I use perl cgi to upload file(any type: text or image)
from web browser. The file was created, but is empty.
The following is my html form file and perl cgi called
by the form.
Can any one help me this issue?
Justin
perl cgi file:
#!/usr/bin/perl
use CGI;
$query = new CGI;
print "Content-t
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Xiangli Zhang wrote:
Gunnar Hjalmarsson wrote:
system(" perl test1.pl");
This is a bette
to the webmaster
([EMAIL PROTECTED]), giving this error message and the
time and date of the error.
Note: forwarded message attached.
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I want to call an application in cgi file, the
application runs when i run the cgi fi
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I want to call an application in cgi file, the
application runs when i run the cgi file at terminal
(which outputs several files), but the application
called is not executed in
I want to call an application in cgi file, the
application runs when i run the cgi file at terminal
(which outputs several files), but the application
called is not executed in the web browser, since no
files are generated.
Can anyone help me this issue?
The following is my code (the last three
Hi,all:
Can anybody help me the question?
I am using apache 2.0 in redhat 9.0. I put my perl cgi
script under var/www/cgi-bin
my souce code(simple.cgi)
#!/usr/local/bin/perl
use CGI qw/:standard/;
print header(),
start_html(-title=>'Wow!'),
h1('Wow!'),
'Look Ma, no hands!',
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