[Bioc-devel] dimnames of multidimensional assays in SummarizedExperiment

2016-02-10 Thread Peter Hickey
The assays slot in a SummarizedExperiment object supports elements with up to 4 dimensions [*] library(SummarizedExperiment) makeSE <- function(n) { assay <- array(1:2^n, dim = rep(2, n), dimnames = split(letters[1:(2 * n)], seq_len(n))) SummarizedExperiment(a

Re: [Bioc-devel] File Layout

2016-02-10 Thread Vincent Carey
Dear Val, LDheatmap is not a bioconductor package as far as I know. Have you read through https://cran.r-project.org/web/packages/LDheatmap/vignettes/LDheatmap.pdf This question could be posed to biostars if there is need for more assistance. bioc-devel is not appropriate for a question of thi