Hi all,
I got en error when it tries to create vignette in BUILD:
tokay2 Windows Server 2012 R2 Standard / x64
Error: processing vignette 'IntroductionToanamiR.Rmd' failed with diagnostics:
could not run statement: Lost connection to MySQL server during query
But for Linux or Mac, it all works.
On Fri, Apr 7, 2017 at 12:46 PM, wrote:
> On Fri, 7 Apr 2017, Hervé Pagès wrote:
>
> On 04/07/2017 05:37 AM, luke-tier...@uiowa.edu wrote:
>>
>>> On Fri, 7 Apr 2017, Hervé Pagès wrote:
>>>
>>> > On 04/06/2017 03:29 AM, Michael Lawrence wrote:
>>> > > On Thu, Apr 6, 2017 at 2:59 AM, Martin Morg
On Fri, 7 Apr 2017, Hervé Pagès wrote:
On 04/07/2017 05:37 AM, luke-tier...@uiowa.edu wrote:
On Fri, 7 Apr 2017, Hervé Pagès wrote:
> On 04/06/2017 03:29 AM, Michael Lawrence wrote:
> > On Thu, Apr 6, 2017 at 2:59 AM, Martin Morgan
> > wrote:
> > > On 04/06/2017 05:33 AM, Aaron Lun wrote
Reminder to please update your NEWS files. These files are collated and
included in the release announcement so it's worth polishing them up.
Thanks.
Valerie
This email message may contain legally privileged and/or confidential
information. If you are not the intended recipient(s), or the em
Today we'll stop commits to the 3.4 release branch at COB EST. Please
commit any last changes before that time. We'll wait one more day to get
a final build report and then stop the release builds all together.
Thanks.
Valerie
This email message may contain legally privileged and/or confidenti
On 04/07/2017 05:37 AM, luke-tier...@uiowa.edu wrote:
On Fri, 7 Apr 2017, Hervé Pagès wrote:
On 04/06/2017 03:29 AM, Michael Lawrence wrote:
On Thu, Apr 6, 2017 at 2:59 AM, Martin Morgan
wrote:
On 04/06/2017 05:33 AM, Aaron Lun wrote:
The tool is not perfect, so assess each report carefull
Hi,
The devel version of our package 'msa' currently does not compile on
veracruz2 (R 3.4.0 alpha under OS X 10.11.6 El Capitan), but it seems to
work on toluca2 (R-devel on OS X 10.9.5 Mavericks). I also checked on my
Mac at home (R 3.3.3 under macOS 10.12.3 Sierra using the very latest
vers
On 04/07/2017 03:55 AM, Ramon Diaz-Uriarte wrote:
Dear Martin and Valerie,
I am not sure how to proceed here since the 14th is approaching and I still
see this error (in both my package and at least one other package
---arrayQualityMetrics).
I could comment out the plotting code for the vign
On Fri, 7 Apr 2017, Hervé Pagès wrote:
On 04/06/2017 03:29 AM, Michael Lawrence wrote:
On Thu, Apr 6, 2017 at 2:59 AM, Martin Morgan
wrote:
On 04/06/2017 05:33 AM, Aaron Lun wrote:
The tool is not perfect, so assess each report carefully.
I get a lot of warnings because the tool seems to
Dear Hervé,
Thanks for your answer. I'll ignore those segfaults then.
Best,
R.
On Fri, 07-04-2017, at 08:36:40, Hervé Pagès wrote:
> Hi Ramon,
>
> It doesn't seem that this segfault occurs in ADaCGH2 so you can
> ignore it. I can't be 100% sure but I actually expect it to go away
> when thin
Hi Ramon,
It doesn't seem that this segfault occurs in ADaCGH2 so you can
ignore it. I can't be 100% sure but I actually expect it to go away
when things are sorted out with the new El Capitan binaries.
Unfortunately it's not something we fully control so let's wait
and see...
Cheers,
H.
On 04
On 04/06/2017 03:29 AM, Michael Lawrence wrote:
On Thu, Apr 6, 2017 at 2:59 AM, Martin Morgan
wrote:
On 04/06/2017 05:33 AM, Aaron Lun wrote:
The tool is not perfect, so assess each report carefully.
I get a lot of warnings because the tool seems to consider that
extracting an attribute (wi
Dear Martin and Valerie,
I am not sure how to proceed here since the 14th is approaching and I still
see this error (in both my package and at least one other package
---arrayQualityMetrics).
I could comment out the plotting code for the vignette and examples when
running on El Capitan. Is thi
Hi Herve
> On 7 Apr 2017, at 07:42, Hervé Pagès wrote:
>
> Hi Johannes,
>
> Thanks for contacting the developers of the packages affected by this
> change. FWIW Pbase is also affected (didn't see it in your list):
>
I fixed Pbase - changes have not been committed to Bioc yet (asked Laurent fo
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