Good day,
I like the idea of a commits log on the Bioconductor website. It was useful
being able to see at a glance which packages have recently been changing.
--
Dario Strbenac
University of Sydney
Camperdown NSW 2050
Australia
___
hi Nitesh,
thanks for the pro-tip and the heads up about the git web i/f.
cheers,
robert.
On 01/09/2017 17:26, Turaga, Nitesh wrote:
Hi Robert,
On Sep 1, 2017, at 11:16 AM, Robert Castelo wrote:
hi,
i've had a smooth transition from SVN to git for all the software packages i
maintain (
Hi Maintainers,
The Bioconductor-mirror has been permanently deprecated. Please do not use this
anymore.
Best,
Nitesh
> On Aug 17, 2017, at 3:53 PM, Turaga, Nitesh
> wrote:
>
> Hi Maintainers,
>
> The https://github.com/Bioconductor-mirror is now stale after Bioconductor’s
> git transiti
Hi Fabian,
Could you please try the merge for the other branch? Or please give me the url
of the GitHub package, and tell me which branch and I’ll see what the problem
is.
Or try it and copy the commands in the email along with the output.
I need more information to help you resolve this.
Bes
On 1 September 2017 16:26, Hervé Pagès wrote:
> Hi Laurent,
>
> I just moved the Ontology generic from AnnotationDbi to BiocGenerics.
> This is BiocGenerics 0.23.1 and AnnotationDbi 1.39.3.
Thank you!
Laurent
> Cheers,
> H.
>
>
> On 09/01/2017 06:31 AM, Laurent Gatto wrote:
>>
>> Dear all,
>>
Hi Laurent,
I just moved the Ontology generic from AnnotationDbi to BiocGenerics.
This is BiocGenerics 0.23.1 and AnnotationDbi 1.39.3.
Cheers,
H.
On 09/01/2017 06:31 AM, Laurent Gatto wrote:
Dear all,
It appears that at least two packages, AnnotationDbi and rols, define
the Ontology generi
Hi Robert,
> On Sep 1, 2017, at 11:16 AM, Robert Castelo wrote:
>
> hi,
>
> i've had a smooth transition from SVN to git for all the software packages i
> maintain (thanks for the great documentation!!) and i have the following
> question.
>
> i keep a local git repository for each of my so
hi,
i've had a smooth transition from SVN to git for all the software
packages i maintain (thanks for the great documentation!!) and i have
the following question.
i keep a local git repository for each of my software packages, hanging
from my github account and this means that i have to pus
I've updated pandoc on the win workflow builder to the latest release
(1.19.2.1) which resolves the vignette compilation error there.
Regarding the Mac builder the workflow fails in the call to
derfinder::loadCoverage issued by the line
regions <- expressed_regions("SRP045638", "chr21", cutoff =
Hi,
The form is fixed now. You should be able to submit.
But your upstream remote is wrong. You need to be using SSH protocol for access
to the git.bioconductor.org server.
i.e your upstream should be
`g...@git.bioconductor.org:packages/SWATH2stats.git`.
Please see the documentation
http:/
Dear all,
It appears that at least two packages, AnnotationDbi and rols, define
the Ontology generic with the same signature
setGeneric("Ontology", function(object) standardGeneric("Ontology"))
Could it be moved to BiocGenerics, please?
Best wishes,
Laurent
--
Laurent Gatto | @lgatt0
http
Dear Nitesh,
I wanted to make some changes to our R/Bioconductor package but whereas I could
successfully push it to my github account, it seems it did not propagate to
bioconductor github / upstream. I guess I maybe didn't set up something
correctly or something with the ssh keys did not work
Hi,
I am trying to make the git transition from our RnBeads package. Unfortunately
I am not able to merge from our current github’s master branch (which had been
existing since SVN times) to the BioC master branch due to unrelated history:
“refusing to merge unrelated histories”
I would like to k
13 matches
Mail list logo
